View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15538_high_20 (Length: 230)
Name: NF15538_high_20
Description: NF15538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15538_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 33521502 - 33521702
Alignment:
| Q |
13 |
atgaacagtcctcgaatatcttagcattctttcattgaagtcaaatccggattcccaaggaatcacggtagaaaatgctcctggtcctagtgaaggagtt |
112 |
Q |
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| T |
33521502 |
atgaacagtcctcgaatatcttagcattctttctttgaagtcgaatccggattcccaaggaatcatggtagaaaatgcgcctggtcctagtgatggagtt |
33521601 |
T |
|
| Q |
113 |
tcaattatagattttacttttgagtcttcatctgatagcactttgtgtacagaagttattattcctccctcatagctttta-ccttgagatcagacattg |
211 |
Q |
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|||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
33521602 |
tcaattatagctcttactttagagtcatcatctgatagcactttgtgtacagaagttattattcctccctcatagcttttacccttgagatcagacattg |
33521701 |
T |
|
| Q |
212 |
t |
212 |
Q |
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| T |
33521702 |
t |
33521702 |
T |
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