View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15538_low_22 (Length: 253)
Name: NF15538_low_22
Description: NF15538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15538_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 23175524 - 23175759
Alignment:
| Q |
1 |
tgcatttccatggcattcataatatgtagttagaatgttgttattaaaaaagtagtagagattgtatgctgataaattcatgttggattatgaaatattt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
23175524 |
tgcatttccatggcattcataatatgtagttagaatgttgttattaaaaaagtagtagagattgtatgctgataaattcatgttggattatgagatattt |
23175623 |
T |
|
| Q |
101 |
tgttcagagtaagattgataagttgagggacaacgtgttactttggaggaagcttctaataagattggtatcaggatcaagatggtcaacaatcacttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23175624 |
tgttcagagtaagattgataagttgagggacaacatgttactttggaggaaacttctaataagattggtatcaggatcaagatggtcaacaatcacttca |
23175723 |
T |
|
| Q |
201 |
ctttcctggtaatagtccctcatctcctctcggttt |
236 |
Q |
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||||||||||||||||||||| |||||||||||||| |
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| T |
23175724 |
ctttcctggtaatagtccctcgtctcctctcggttt |
23175759 |
T |
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