View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15538_low_9 (Length: 422)
Name: NF15538_low_9
Description: NF15538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15538_low_9 |
 | |
|
| [»] chr7 (16 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 407; Significance: 0; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 36226341 - 36225919
Alignment:
| Q |
1 |
gggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226341 |
gggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactca |
36226242 |
T |
|
| Q |
101 |
ttcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226241 |
ttcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggt |
36226142 |
T |
|
| Q |
201 |
gataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36226141 |
gataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgttcaacgataagagggttgatgatcttt |
36226042 |
T |
|
| Q |
301 |
tccaattgaagatgtcggtgtgtatctctgatgattttgatattaggcaaacccattttcatgcccatatttatgtggtaattt-gaaaataagaggaca |
399 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36226041 |
tccaattgaagatgtgggtgtgtatctctgatgattttgatattaggcaaacccattttcatgcccatatttatgtggtaatttggaaaataagaggaca |
36225942 |
T |
|
| Q |
400 |
agaaagacaaaggaagacaaaaa |
422 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
36225941 |
agaaagacaaaggaagacaaaaa |
36225919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 3 - 348
Target Start/End: Original strand, 36221228 - 36221573
Alignment:
| Q |
3 |
gatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcatt |
102 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||||| | | || |||||||| ||||||| | ||||||| |
|
|
| T |
36221228 |
gatagattgaataaggtggcagctgacgggacaaggtttggacttgtgagaatcgatgttgcacctgatcctgttgtgcagaggagagaattcactcatt |
36221327 |
T |
|
| Q |
103 |
cccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtga |
202 |
Q |
| |
|
| |||||||||||||| ||| || || ||||||||||| ||| | || |||||||| ||||||||||| || |||||||| || |||| |||||||| |
|
|
| T |
36221328 |
catacgttgatgcttcaagtgttattgggagggagaatgacagggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtga |
36221427 |
T |
|
| Q |
203 |
taaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttc |
302 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| | |||||| ||||| |
|
|
| T |
36221428 |
caaaaatttgtgtgttattcccatagttggaattggtggcttggggaagaccacacttgcaaggttggtgttcaatgataagaggatagatgatattttc |
36221527 |
T |
|
| Q |
303 |
caattgaagatgtcggtgtgtatctctgatgattttgatattaggc |
348 |
Q |
| |
|
||||||||||| | ||||||| |||| |||||||||||||||||| |
|
|
| T |
36221528 |
caattgaagatttgggtgtgtgtctccaatgattttgatattaggc |
36221573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 343
Target Start/End: Complemental strand, 35982459 - 35982126
Alignment:
| Q |
4 |
atagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcattc |
103 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||| | |||||| || |||||| |||||||||| |
|
|
| T |
35982459 |
atagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaattgactcattc |
35982360 |
T |
|
| Q |
104 |
ccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgat |
203 |
Q |
| |
|
||| |||||||||| |||||||||||||| ||||| || ||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
35982359 |
ccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaaggt------gatggtgat |
35982266 |
T |
|
| Q |
204 |
aaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttga-tgatcttttc |
302 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||| ||| ||||| | || ||||||| |
|
|
| T |
35982265 |
aaaagcttatgtgttattcccattgtgggaattggaggtttgggaaagactacacttgcaaaattggttttcaatgatgagaggatggaccaatctttt- |
35982167 |
T |
|
| Q |
303 |
caattgaagatgtcggtgtgtatctctgatgattttgatat |
343 |
Q |
| |
|
| |||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
35982166 |
aagttgaggatgtgggtgtgcgtctctgatgattttgatat |
35982126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 343
Target Start/End: Complemental strand, 36003871 - 36003538
Alignment:
| Q |
4 |
atagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcattc |
103 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||| | |||||| || |||||| |||||||||| |
|
|
| T |
36003871 |
atagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaattgactcattc |
36003772 |
T |
|
| Q |
104 |
ccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgat |
203 |
Q |
| |
|
||| |||||||||| |||||||||||||| ||||| || ||| |||| ||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
36003771 |
ccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaaggt------gatggtgat |
36003678 |
T |
|
| Q |
204 |
aaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttga-tgatcttttc |
302 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||| ||| ||||| | || ||||||| |
|
|
| T |
36003677 |
aaaagcttatgtgttattcccattgtgggaattggaggtttgggaaagactacacttgcaaaattggttttcaatgatgagaggatggaccaatctttt- |
36003579 |
T |
|
| Q |
303 |
caattgaagatgtcggtgtgtatctctgatgattttgatat |
343 |
Q |
| |
|
| |||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
36003578 |
aagttgaggatgtgggtgtgcgtctctgatgattttgatat |
36003538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 3 - 343
Target Start/End: Original strand, 36217243 - 36217583
Alignment:
| Q |
3 |
gatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcatt |
102 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| | ||||||||||| |||| |||||| |||||| ||||||| || |||||||| || ||| |
|
|
| T |
36217243 |
gatagattggataaagtggcagctgatgggaccaagtttggacttgtgagaattcatgttgagcccggactttctgtgcacaatagagaaatcacctatt |
36217342 |
T |
|
| Q |
103 |
cccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtga |
202 |
Q |
| |
|
|||| |||||| |||| ||| ||||||||||||||||| | | | | |||||| ||||||||||| | | ||||||||||| ||| ||||| | |
|
|
| T |
36217343 |
cccatattgatgtttcaagtgttataggaagggagaatgacaaggaagcaattatcgagcttttgatggattccgatcctcaaggttatggaaatggtca |
36217442 |
T |
|
| Q |
203 |
taaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttc |
302 |
Q |
| |
|
|| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||| | ||||| |||| |
|
|
| T |
36217443 |
tagaagtttatgtgttattcccatagtgggaattggaggattggggaagaccacacttgcaaaattggtgtacaatgataagaggatagatgaagttttt |
36217542 |
T |
|
| Q |
303 |
caattgaagatgtcggtgtgtatctctgatgattttgatat |
343 |
Q |
| |
|
||||||||||||| || ||| |||||| |||||||||||| |
|
|
| T |
36217543 |
caattgaagatgtgggcatgtgtctctgttgattttgatat |
36217583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 166 - 349
Target Start/End: Complemental strand, 35939622 - 35939439
Alignment:
| Q |
166 |
tgatgcagccacatcctcaaggtgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaa |
265 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||| || || |||||||||||||||||||| |
|
|
| T |
35939622 |
tgatgcaaccacatcctcacggtgatggtgatggtgataaaagtttatgtgttattcccattgtgggaattggaggattagggaagaccacacttgcaaa |
35939523 |
T |
|
| Q |
266 |
attggtgctcaacgataagagggttgatgatcttttccaattgaagatgtcggtgtgtatctctgatgattttgatattaggca |
349 |
Q |
| |
|
|||||| |||| ||||||||||| || | ||||||||||||||||||| | ||||| |||| |||| |||||||| ||||| |
|
|
| T |
35939522 |
gttggtgttcaatgataagagggtgaatcaacttttccaattgaagatgtggttgtgtgtctccaatgagtttgatatcaggca |
35939439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 337
Target Start/End: Complemental strand, 35947132 - 35946904
Alignment:
| Q |
109 |
ttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaag |
208 |
Q |
| |
|
||||||||||| |||||||||||| || |||||| |||| || |||| ||||||||||||||||||||||| || |||| |||||||||||| || |
|
|
| T |
35947132 |
ttgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaatcttcaatcttttgatgcagccacatcctcacggcgatggtgatggtgataatag |
35947033 |
T |
|
| Q |
209 |
tttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttccaattg |
308 |
Q |
| |
|
| | ||||| ||||| |||||||||||||| || ||| |||||||||||||||| || | |||| |||| ||||||||| | || | |||||||| ||| |
|
|
| T |
35947032 |
tctctgtgtcattccaatagtgggaattggaggtttgtggaagaccacacttgcgaagtcggtgttcaatgataagaggatacatcaacttttccagttg |
35946933 |
T |
|
| Q |
309 |
aagatgtcggtgtgtatctctgatgattt |
337 |
Q |
| |
|
||||||| |||||||||||| |||||||| |
|
|
| T |
35946932 |
aagatgtgggtgtgtatctccgatgattt |
35946904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 153 - 337
Target Start/End: Complemental strand, 35958293 - 35958109
Alignment:
| Q |
153 |
attatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaaga |
252 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || |||| |||||||||||| ||| | ||||| ||||| |||||||||||||| || ||||| |||| |
|
|
| T |
35958293 |
attatcaatcttttgatgcagccacatcctcgcggagatggtgatggtgataatagtctctgtgtcattccaatagtgggaattggaggtttgggaaaga |
35958194 |
T |
|
| Q |
253 |
ccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttccaattgaagatgtcggtgtgtatctctgatgattt |
337 |
Q |
| |
|
| ||||||||||| | |||| |||| ||||||||| | ||| | |||||||| |||||||||| |||||||||||| |||||||| |
|
|
| T |
35958193 |
caacacttgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttgaagatgtgggtgtgtatctccgatgattt |
35958109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 337
Target Start/End: Complemental strand, 35977792 - 35977564
Alignment:
| Q |
109 |
ttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaag |
208 |
Q |
| |
|
||||||||||| |||||||||||| || |||||| |||| |||||||| |||||||||||| |||| ||||| | |||| || ||||||||| || |
|
|
| T |
35977792 |
ttgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaattatcaatcttttgatgcagtcacaccctcacagcgatggtggtggtgataatag |
35977693 |
T |
|
| Q |
209 |
tttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttccaattg |
308 |
Q |
| |
|
| | ||||| ||||| |||||||||||||| || |||||||||||||| ||||||| | |||| |||| ||||||||| | ||| | |||||||| ||| |
|
|
| T |
35977692 |
tctttgtgtcattccaatagtgggaattggaggtttggggaagaccaccattgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttg |
35977593 |
T |
|
| Q |
309 |
aagatgtcggtgtgtatctctgatgattt |
337 |
Q |
| |
|
||||||| ||||||||||||||||||||| |
|
|
| T |
35977592 |
aagatgtgggtgtgtatctctgatgattt |
35977564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 337
Target Start/End: Complemental strand, 35999204 - 35998976
Alignment:
| Q |
109 |
ttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaag |
208 |
Q |
| |
|
||||||||||| |||||||||||| || |||||| |||| |||||||| |||||||||||| |||| ||||| | |||| || ||||||||| || |
|
|
| T |
35999204 |
ttgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaattatcaatcttttgatgcagtcacaccctcacagcgatggtggtggtgataatag |
35999105 |
T |
|
| Q |
209 |
tttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttccaattg |
308 |
Q |
| |
|
| | ||||| ||||| |||||||||||||| || |||||||||||||| ||||||| | |||| |||| ||||||||| | ||| | |||||||| ||| |
|
|
| T |
35999104 |
tctttgtgtcattccaatagtgggaattggaggtttggggaagaccaccattgcaaagtcggtgttcaatgataagaggatggatcaacttttccagttg |
35999005 |
T |
|
| Q |
309 |
aagatgtcggtgtgtatctctgatgattt |
337 |
Q |
| |
|
||||||| ||||||||||||||||||||| |
|
|
| T |
35999004 |
aagatgtgggtgtgtatctctgatgattt |
35998976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 35973675 - 35973540
Alignment:
| Q |
86 |
gagagaaatgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaa |
185 |
Q |
| |
|
||||||| ||||| ||||||| || ||||||||| ||| || || ||||||||||| ||| | || |||||||||||| ||||||| |||| ||||||| |
|
|
| T |
35973675 |
gagagaattgactaattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaa |
35973576 |
T |
|
| Q |
186 |
ggtgatgctgatggtgataaaagtttgtgtgttatt |
221 |
Q |
| |
|
||||||| || |||||||||||||||||||||||| |
|
|
| T |
35973575 |
ggtgatggagacggtgataaaagtttgtgtgttatt |
35973540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 35995087 - 35994952
Alignment:
| Q |
86 |
gagagaaatgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaa |
185 |
Q |
| |
|
||||||| ||||| ||||||| || ||||||||| ||| || || ||||||||||| ||| | || |||||||||||| ||||||| |||| ||||||| |
|
|
| T |
35995087 |
gagagaattgactaattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaa |
35994988 |
T |
|
| Q |
186 |
ggtgatgctgatggtgataaaagtttgtgtgttatt |
221 |
Q |
| |
|
||||||| || |||||||||||||||||||||||| |
|
|
| T |
35994987 |
ggtgatggagacggtgataaaagtttgtgtgttatt |
35994952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 35955302 - 35955174
Alignment:
| Q |
193 |
ctgatggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttga |
292 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| | || ||||| || ||||| ||||||||||||||||| || ||| |||| ||| | ||||| || |
|
|
| T |
35955302 |
ctgatggagataaaagtttgtgtgttattcccataataggtattggaggattgggaaagaccacacttgcaaagttagtgttcaatgatgaaagggtgga |
35955203 |
T |
|
| Q |
293 |
tgatcttttccaattgaagatgtcggtgt |
321 |
Q |
| |
|
| | ||||| |||||||||||| ||||| |
|
|
| T |
35955202 |
tcaaattttcaaattgaagatgtgggtgt |
35955174 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 35965738 - 35965669
Alignment:
| Q |
216 |
gttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataaga |
285 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| |
|
|
| T |
35965738 |
gttattcccatactaggaattggtggcttggggaagaccacacttgcaaacttggtgttcaatgataaga |
35965669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 340
Target Start/End: Complemental strand, 29603005 - 29602862
Alignment:
| Q |
197 |
tggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgat |
296 |
Q |
| |
|
|||| |||||||| | | ||||||||| || || |||||||| |||||||| ||||| ||||||||||| |||| |||| |||||||| | || || |
|
|
| T |
29603005 |
tggtcataaaagtctctctgttattcctattgttggaattggaggcttgggaaagactacacttgcaaagacggtgttcaatgataagagtttagacgag |
29602906 |
T |
|
| Q |
297 |
cttttccaattgaagatgtcggtgtgtatctctgatgattttga |
340 |
Q |
| |
|
||||| ||| ||||||| ||||||| |||| ||||||||||| |
|
|
| T |
29602905 |
actttcccattaaagatgtgggtgtgtgtctccgatgattttga |
29602862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 29750289 - 29750378
Alignment:
| Q |
197 |
tggtgataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagag |
286 |
Q |
| |
|
|||| |||||||| | | ||||||||| || || |||||||| |||||||| ||||| ||||||||||| |||| |||| |||||||| |
|
|
| T |
29750289 |
tggtcataaaagtctctctgttattcctattgttggaattggaggcttgggaaagactacacttgcaaagacggtgttcaatgataagag |
29750378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 18126153 - 18125803
Alignment:
| Q |
1 |
gggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactca |
100 |
Q |
| |
|
||||||||||| ||||||| ||| | |||||||||| ||||||||||||| | |||| ||||||| |||| |||||| ||||| ||||||||| | |
|
|
| T |
18126153 |
gggatagattggataaggtagcaaccgatgggactaagtttggacttgcaactattaatgttgatcccagactcattgtgcaaaagagggaaatgactta |
18126054 |
T |
|
| Q |
101 |
ttcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggt |
200 |
Q |
| |
|
| | | |||||||||| ||| |||||||| |||| ||| ||| | || |||||||||||||||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
18126053 |
tcctgatgttgatgctttgagtgtaataggaagagagagtgatagggaagagattatcaagcttttgatgcaagcacatcctcatggtgatggtgatggt |
18125954 |
T |
|
| Q |
201 |
gataaaagtttgtgtgttattcccatagtgggaattggtggcttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttt |
300 |
Q |
| |
|
||||||||| | | |||||||||||| |||||||||||||||||||||||||||||| | ||||| | || |||| |||||||| | ||||| || | |
|
|
| T |
18125953 |
gataaaagtctatctgttattcccatggtgggaattggtggcttggggaagaccacattggcaaagcttgttttcaatgataagagaatagatgaactct |
18125854 |
T |
|
| Q |
301 |
tccaattgaagatgtcggtgtgtatctctgatgattttgatattaggcaaa |
351 |
Q |
| |
|
| ||||||||||||| ||||||| |||||||| ||||||| || ||||||| |
|
|
| T |
18125853 |
ttcaattgaagatgtgggtgtgtgtctctgataattttgacatcaggcaaa |
18125803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 18118267 - 18118195
Alignment:
| Q |
243 |
ttggggaagaccacacttgcaaaattggtgctcaacgataagagggttgatgatcttttccaattgaagatgt |
315 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||| | ||||| |||| ||||||||||||| |
|
|
| T |
18118267 |
ttggggaagaccacacttgcaaagttggtattcaacgataagaggatcgatgaattttttcaattgaagatgt |
18118195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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