View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1553_low_15 (Length: 267)
Name: NF1553_low_15
Description: NF1553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1553_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 32566905 - 32567162
Alignment:
| Q |
1 |
accactcatccgcattgtctctggtgtgaatttaataataaaaatagtgagtgtaagattgagattaataccaaacgcaatttttctccagttctgattc |
100 |
Q |
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| T |
32566905 |
accactcatccgcattgtctctggtgtgaatttaataataaaaatagtgagtgtaagattgagattaataccaaacgcaatttttctccagttctgattc |
32567004 |
T |
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| Q |
101 |
tagaattgggacgagaaaacttggactcatacggagttctaggcctgagttcccgaaccttgtcccactcctcacggctgagcattctcacagtaccttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32567005 |
tagaattgggacgagaaaacttggactcatacggagttctaggcctgagttcccgaaccttgtcccactcctcacggctgagcattctcacagtaccttg |
32567104 |
T |
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| Q |
201 |
accttctggagcattctttatcctacgctccaacaactcttgggacctcgattcatct |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32567105 |
accttctggagcattctttatcctacgctccaacaactcttgggacctcgattcatct |
32567162 |
T |
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