View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1553_low_2 (Length: 592)

Name: NF1553_low_2
Description: NF1553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1553_low_2
NF1553_low_2
[»] chr2 (51 HSPs)
chr2 (20-580)||(30411343-30411903)
chr2 (336-570)||(27908992-27909237)
chr2 (360-569)||(17349362-17349573)
chr2 (340-566)||(17743354-17743590)
chr2 (380-569)||(29142986-29143174)
chr2 (380-571)||(25530472-25530662)
chr2 (340-569)||(28925507-28925746)
chr2 (380-580)||(26603223-26603424)
chr2 (380-571)||(25535299-25535488)
chr2 (356-569)||(29719106-29719329)
chr2 (392-569)||(25920303-25920478)
chr2 (340-580)||(17675491-17675744)
chr2 (340-580)||(17635637-17635889)
chr2 (356-569)||(15339239-15339463)
chr2 (380-569)||(24090813-24091000)
chr2 (380-570)||(25618581-25618781)
chr2 (381-551)||(31804791-31804973)
chr2 (367-563)||(25196022-25196229)
chr2 (392-569)||(17197906-17198081)
chr2 (357-455)||(45621880-45621978)
chr2 (482-570)||(25887777-25887864)
chr2 (482-577)||(23933412-23933505)
chr2 (357-439)||(20174650-20174732)
chr2 (482-555)||(32085602-32085673)
chr2 (356-455)||(12953293-12953392)
chr2 (497-562)||(12953225-12953290)
chr2 (380-569)||(26667342-26667519)
chr2 (340-436)||(32085448-32085544)
chr2 (482-577)||(45553268-45553360)
chr2 (382-455)||(9774334-9774405)
chr2 (360-454)||(25885460-25885553)
chr2 (356-453)||(8503071-8503168)
chr2 (356-437)||(19200152-19200232)
chr2 (356-453)||(23011764-23011860)
chr2 (356-454)||(25888224-25888318)
chr2 (355-455)||(11382752-11382852)
chr2 (482-542)||(13776476-13776536)
chr2 (356-439)||(45553131-45553214)
chr2 (340-437)||(13776324-13776420)
chr2 (340-453)||(17889922-17890034)
chr2 (481-570)||(17890075-17890162)
chr2 (482-542)||(11382654-11382713)
chr2 (359-439)||(28770458-28770538)
chr2 (395-453)||(21078627-21078685)
chr2 (380-454)||(27418391-27418465)
chr2 (356-425)||(8447079-8447147)
chr2 (340-427)||(12557736-12557823)
chr2 (486-525)||(45621799-45621838)
chr2 (392-453)||(5777253-5777314)
chr2 (393-454)||(28606178-28606239)
chr2 (482-514)||(29027635-29027667)
[»] chr1 (65 HSPs)
chr1 (356-580)||(21449090-21449314)
chr1 (340-569)||(18736126-18736354)
chr1 (340-570)||(17610129-17610370)
chr1 (340-556)||(29242504-29242718)
chr1 (346-557)||(21987880-21988090)
chr1 (340-571)||(15543839-15544080)
chr1 (340-570)||(12208586-12208827)
chr1 (380-569)||(16916820-16917008)
chr1 (351-557)||(25405517-25405733)
chr1 (380-569)||(727492-727680)
chr1 (380-565)||(16069440-16069625)
chr1 (380-569)||(18825680-18825868)
chr1 (358-557)||(16179010-16179219)
chr1 (380-566)||(24054004-24054188)
chr1 (380-568)||(18830506-18830693)
chr1 (380-569)||(23179822-23180009)
chr1 (380-569)||(14781740-14781927)
chr1 (358-569)||(9401511-9401730)
chr1 (380-569)||(21666483-21666682)
chr1 (340-475)||(14779550-14779684)
chr1 (356-569)||(17359163-17359386)
chr1 (357-557)||(31235935-31236145)
chr1 (482-569)||(18100888-18100973)
chr1 (356-453)||(13345337-13345434)
chr1 (380-570)||(21334591-21334793)
chr1 (482-569)||(22623029-22623115)
chr1 (342-453)||(24306307-24306417)
chr1 (380-455)||(51473875-51473950)
chr1 (340-453)||(3591654-3591767)
chr1 (380-456)||(16787724-16787800)
chr1 (484-571)||(21973077-21973164)
chr1 (356-454)||(23038012-23038109)
chr1 (340-453)||(17837502-17837615)
chr1 (482-555)||(22664346-22664417)
chr1 (482-566)||(17121378-17121460)
chr1 (340-452)||(27117720-27117832)
chr1 (482-566)||(28008244-28008326)
chr1 (485-556)||(18529079-18529149)
chr1 (356-439)||(21847635-21847717)
chr1 (498-557)||(25403977-25404036)
chr1 (482-569)||(32382883-32382968)
chr1 (360-454)||(24281282-24281376)
chr1 (482-569)||(15807895-15807980)
chr1 (482-553)||(9787769-9787839)
chr1 (340-454)||(15813155-15813268)
chr1 (360-454)||(22664211-22664305)
chr1 (340-434)||(44795354-44795447)
chr1 (356-437)||(9787896-9787977)
chr1 (482-571)||(12012686-12012773)
chr1 (485-570)||(23037884-23037969)
chr1 (380-455)||(22620287-22620362)
chr1 (380-455)||(22622915-22622990)
chr1 (486-557)||(33190820-33190889)
chr1 (380-454)||(24214569-24214643)
chr1 (340-453)||(26540880-26540993)
chr1 (533-570)||(13345211-13345248)
chr1 (480-545)||(14779702-14779766)
chr1 (523-571)||(15813415-15813463)
chr1 (354-454)||(26648971-26649070)
chr1 (482-545)||(16360010-16360071)
chr1 (524-571)||(25961038-25961085)
chr1 (380-454)||(147656-147730)
chr1 (382-455)||(15813523-15813597)
chr1 (340-454)||(33190662-33190776)
chr1 (356-405)||(32383047-32383096)
[»] chr4 (65 HSPs)
chr4 (340-570)||(19492585-19492814)
chr4 (340-571)||(13908839-13909081)
chr4 (340-571)||(15164752-15164992)
chr4 (356-567)||(13692557-13692767)
chr4 (339-569)||(7582281-7582522)
chr4 (392-569)||(17026218-17026394)
chr4 (340-580)||(17216802-17217058)
chr4 (340-527)||(16730316-16730513)
chr4 (356-569)||(19562049-19562276)
chr4 (356-569)||(17709758-17709978)
chr4 (380-571)||(17337007-17337209)
chr4 (340-453)||(19882625-19882738)
chr4 (380-567)||(25097859-25098044)
chr4 (356-548)||(13128768-13128972)
chr4 (356-453)||(20315001-20315098)
chr4 (340-456)||(21323873-21323989)
chr4 (477-577)||(25121093-25121191)
chr4 (392-569)||(12406577-12406753)
chr4 (489-568)||(24639336-24639415)
chr4 (380-569)||(25094592-25094779)
chr4 (380-454)||(11490557-11490631)
chr4 (356-454)||(12578266-12578364)
chr4 (338-454)||(17671985-17672101)
chr4 (485-580)||(14649036-14649130)
chr4 (354-454)||(5679204-5679304)
chr4 (482-577)||(26115772-26115865)
chr4 (485-580)||(40227917-40228011)
chr4 (340-444)||(9737514-9737623)
chr4 (380-441)||(24639467-24639528)
chr4 (340-453)||(25121227-25121339)
chr4 (339-427)||(14648879-14648966)
chr4 (482-557)||(17672141-17672214)
chr4 (357-439)||(13992891-13992973)
chr4 (485-539)||(19929579-19929632)
chr4 (356-430)||(19929699-19929773)
chr4 (482-551)||(17951189-17951256)
chr4 (354-454)||(8969722-8969821)
chr4 (357-437)||(15047130-15047210)
chr4 (357-437)||(15107214-15107294)
chr4 (482-570)||(22357405-22357492)
chr4 (335-454)||(9052654-9052772)
chr4 (380-439)||(19636601-19636660)
chr4 (340-430)||(17951320-17951410)
chr4 (482-548)||(17955044-17955108)
chr4 (340-430)||(17955172-17955262)
chr4 (356-454)||(20829739-20829836)
chr4 (356-446)||(22175970-22176060)
chr4 (380-437)||(19092320-19092377)
chr4 (340-453)||(23080326-23080439)
chr4 (357-453)||(19374814-19374909)
chr4 (381-453)||(22526390-22526462)
chr4 (482-525)||(9264923-9264966)
chr4 (367-454)||(11933431-11933517)
chr4 (381-427)||(11521218-11521264)
chr4 (380-425)||(10589737-10589781)
chr4 (340-441)||(11700583-11700683)
chr4 (524-569)||(11935237-11935282)
chr4 (485-542)||(20829640-20829696)
chr4 (357-427)||(22357559-22357632)
chr4 (485-515)||(12578193-12578223)
chr4 (482-515)||(5679344-5679377)
chr4 (339-427)||(11093947-11094036)
chr4 (342-403)||(12318420-12318481)
chr4 (482-555)||(19092434-19092505)
chr4 (485-569)||(21323752-21323833)
[»] chr8 (49 HSPs)
chr8 (340-580)||(17101768-17102007)
chr8 (356-580)||(29382224-29382459)
chr8 (356-570)||(24114157-24114380)
chr8 (380-551)||(27659470-27659642)
chr8 (356-570)||(24269599-24269822)
chr8 (380-568)||(23893089-23893275)
chr8 (395-569)||(16403952-16404125)
chr8 (350-571)||(25226131-25226362)
chr8 (380-569)||(19264067-19264256)
chr8 (357-569)||(13314866-13315089)
chr8 (357-557)||(18448428-18448639)
chr8 (396-566)||(18569107-18569276)
chr8 (489-570)||(24110543-24110623)
chr8 (497-580)||(26394562-26394644)
chr8 (340-454)||(30806492-30806611)
chr8 (482-569)||(44010898-44010984)
chr8 (360-453)||(14075599-14075692)
chr8 (338-454)||(14528132-14528248)
chr8 (482-586)||(21314761-21314865)
chr8 (482-570)||(25182301-25182388)
chr8 (343-454)||(6884946-6885056)
chr8 (356-439)||(24904634-24904717)
chr8 (380-454)||(2637623-2637697)
chr8 (340-438)||(5850926-5851024)
chr8 (340-437)||(19786716-19786813)
chr8 (481-557)||(14626166-14626242)
chr8 (380-547)||(17509271-17509447)
chr8 (380-455)||(21314648-21314723)
chr8 (356-422)||(26008024-26008090)
chr8 (336-452)||(15238780-15238896)
chr8 (366-438)||(34497126-34497198)
chr8 (339-454)||(25182428-25182543)
chr8 (482-577)||(34497255-34497348)
chr8 (482-571)||(7983720-7983807)
chr8 (482-571)||(13697994-13698080)
chr8 (393-454)||(13697893-13697954)
chr8 (482-551)||(14528288-14528355)
chr8 (486-539)||(19786874-19786926)
chr8 (361-430)||(44011048-44011116)
chr8 (335-430)||(17976599-17976694)
chr8 (360-423)||(30783772-30783835)
chr8 (483-577)||(9642018-9642110)
chr8 (488-546)||(24644984-24645042)
chr8 (482-552)||(30122046-30122114)
chr8 (356-437)||(24110672-24110753)
chr8 (380-453)||(30122156-30122228)
chr8 (482-542)||(6885096-6885155)
chr8 (357-427)||(31288360-31288429)
chr8 (356-409)||(5052966-5053019)
[»] chr7 (102 HSPs)
chr7 (367-569)||(11803092-11803293)
chr7 (380-569)||(16058907-16059096)
chr7 (380-571)||(1848100-1848301)
chr7 (344-567)||(13418523-13418744)
chr7 (339-557)||(8978892-8979121)
chr7 (372-566)||(39273053-39273257)
chr7 (380-557)||(3329543-3329732)
chr7 (354-569)||(6042460-6042675)
chr7 (381-554)||(17077154-17077325)
chr7 (356-580)||(2563819-2564054)
chr7 (380-569)||(4449005-4449192)
chr7 (341-476)||(13759838-13759973)
chr7 (380-569)||(13277528-13277716)
chr7 (485-580)||(5108706-5108801)
chr7 (350-568)||(20582254-20582479)
chr7 (356-569)||(8053937-8054156)
chr7 (356-479)||(8054465-8054587)
chr7 (356-455)||(11221163-11221262)
chr7 (356-573)||(18368849-18369078)
chr7 (340-454)||(31492915-31493029)
chr7 (336-453)||(9864327-9864444)
chr7 (380-557)||(17191100-17191276)
chr7 (356-437)||(10587041-10587122)
chr7 (380-568)||(13289294-13289482)
chr7 (488-568)||(4785985-4786064)
chr7 (482-570)||(9131049-9131136)
chr7 (482-565)||(7397280-7397362)
chr7 (356-455)||(9731626-9731725)
chr7 (340-566)||(16365690-16365927)
chr7 (482-571)||(18662579-18662666)
chr7 (340-436)||(7318258-7318354)
chr7 (380-543)||(7492163-7492337)
chr7 (482-569)||(8877559-8877646)
chr7 (338-453)||(16306677-16306792)
chr7 (487-570)||(17153027-17153109)
chr7 (356-439)||(23099967-23100050)
chr7 (357-454)||(3734598-3734695)
chr7 (340-453)||(18495358-18495471)
chr7 (384-453)||(18662470-18662539)
chr7 (361-437)||(8313412-8313488)
chr7 (356-439)||(5108567-5108649)
chr7 (482-569)||(10586898-10586984)
chr7 (482-553)||(16297724-16297794)
chr7 (335-454)||(17153154-17153273)
chr7 (340-454)||(1584530-1584642)
chr7 (339-453)||(5530005-5530119)
chr7 (380-456)||(17203049-17203124)
chr7 (380-455)||(4785861-4785936)
chr7 (380-455)||(4818861-4818936)
chr7 (356-435)||(9574408-9574487)
chr7 (482-570)||(19153434-19153522)
chr7 (482-570)||(20752833-20752921)
chr7 (482-571)||(7318412-7318501)
chr7 (482-568)||(9731502-9731587)
chr7 (340-453)||(9916550-9916664)
chr7 (340-453)||(9924462-9924576)
chr7 (482-555)||(3734735-3734806)
chr7 (356-453)||(4579099-4579195)
chr7 (356-453)||(9500445-9500542)
chr7 (486-571)||(17829712-17829795)
chr7 (380-453)||(18467476-18467549)
chr7 (381-453)||(18466031-18466103)
chr7 (380-555)||(22067128-22067300)
chr7 (354-453)||(10584487-10584586)
chr7 (356-427)||(10937603-10937674)
chr7 (356-439)||(16297835-16297918)
chr7 (340-454)||(1587666-1587780)
chr7 (356-434)||(2350767-2350845)
chr7 (340-453)||(18449226-18449340)
chr7 (482-571)||(8313265-8313352)
chr7 (482-571)||(14195845-14195932)
chr7 (340-437)||(14755147-14755244)
chr7 (384-453)||(22339312-22339381)
chr7 (483-564)||(31493066-31493145)
chr7 (499-568)||(4818995-4819065)
chr7 (354-430)||(4986554-4986630)
chr7 (354-430)||(4990652-4990728)
chr7 (339-455)||(12329666-12329782)
chr7 (381-453)||(21230338-21230410)
chr7 (380-439)||(3191074-3191133)
chr7 (489-564)||(6006084-6006157)
chr7 (486-557)||(8293928-8293997)
chr7 (482-537)||(10648717-10648770)
chr7 (380-454)||(12181633-12181708)
chr7 (354-425)||(15303650-15303720)
chr7 (356-427)||(23093311-23093381)
chr7 (482-568)||(140255-140339)
chr7 (482-549)||(1587821-1587884)
chr7 (356-454)||(6013594-6013692)
chr7 (356-454)||(15869596-15869694)
chr7 (381-427)||(21912507-21912553)
chr7 (340-453)||(5797496-5797609)
chr7 (489-570)||(15869740-15869820)
chr7 (360-409)||(21227184-21227233)
chr7 (366-454)||(10648589-10648677)
chr7 (380-439)||(8877446-8877505)
chr7 (354-425)||(20174571-20174641)
chr7 (488-552)||(6013739-6013800)
chr7 (357-426)||(7397198-7397266)
chr7 (356-453)||(14195974-14196070)
chr7 (366-454)||(1872796-1872884)
chr7 (397-453)||(6005878-6005934)
[»] chr6 (72 HSPs)
chr6 (340-580)||(23844327-23844579)
chr6 (350-569)||(25781790-25782002)
chr6 (356-567)||(27737565-27737787)
chr6 (380-569)||(24657343-24657529)
chr6 (360-566)||(5624645-5624862)
chr6 (391-569)||(11135943-11136122)
chr6 (338-580)||(17826959-17827208)
chr6 (341-479)||(9516771-9516908)
chr6 (380-565)||(22412940-22413123)
chr6 (380-569)||(21841574-21841762)
chr6 (384-569)||(23009282-23009464)
chr6 (384-569)||(23778900-23779082)
chr6 (340-453)||(9726007-9726120)
chr6 (340-569)||(27124369-27124606)
chr6 (380-557)||(22813607-22813783)
chr6 (380-569)||(23231859-23232057)
chr6 (482-569)||(20005792-20005879)
chr6 (339-434)||(20005899-20005994)
chr6 (488-580)||(14637012-14637104)
chr6 (360-456)||(23645765-23645861)
chr6 (482-569)||(20144996-20145083)
chr6 (482-569)||(22187756-22187843)
chr6 (380-537)||(22410234-22410401)
chr6 (356-439)||(23143723-23143806)
chr6 (489-551)||(17382214-17382275)
chr6 (479-580)||(24475191-24475292)
chr6 (481-570)||(14079331-14079420)
chr6 (482-589)||(12183185-12183290)
chr6 (366-453)||(17299832-17299919)
chr6 (357-444)||(17729154-17729241)
chr6 (356-439)||(21679866-21679949)
chr6 (356-454)||(12183331-12183429)
chr6 (340-434)||(21907417-21907511)
chr6 (381-454)||(28933660-28933733)
chr6 (340-452)||(25927305-25927417)
chr6 (356-439)||(21672450-21672533)
chr6 (356-454)||(15466371-15466468)
chr6 (357-438)||(18075404-18075485)
chr6 (357-454)||(21688795-21688892)
chr6 (477-566)||(22566039-22566127)
chr6 (482-567)||(23645644-23645727)
chr6 (482-570)||(28933534-28933620)
chr6 (491-566)||(1635110-1635183)
chr6 (486-571)||(9838499-9838582)
chr6 (341-426)||(17382131-17382216)
chr6 (380-437)||(19244610-19244667)
chr6 (482-571)||(8241414-8241499)
chr6 (340-454)||(11176935-11177049)
chr6 (340-454)||(22567825-22567939)
chr6 (381-454)||(4339761-4339834)
chr6 (482-553)||(15466509-15466577)
chr6 (380-453)||(22566163-22566236)
chr6 (380-452)||(7542962-7543034)
chr6 (340-427)||(28586057-28586145)
chr6 (356-439)||(8241278-8241359)
chr6 (360-459)||(17883780-17883878)
chr6 (486-569)||(21907577-21907659)
chr6 (380-454)||(9838381-9838455)
chr6 (514-580)||(17883705-17883771)
chr6 (486-543)||(24252131-24252186)
chr6 (339-454)||(9898958-9899074)
chr6 (411-475)||(14636923-14636987)
chr6 (396-456)||(24252227-24252287)
chr6 (356-407)||(14079491-14079542)
chr6 (482-557)||(25927192-25927265)
chr6 (479-557)||(9516921-9516998)
chr6 (523-557)||(18075297-18075331)
chr6 (356-406)||(21932100-21932150)
chr6 (380-450)||(24251541-24251611)
chr6 (482-555)||(11177089-11177161)
chr6 (482-555)||(21672323-21672394)
chr6 (482-555)||(21679739-21679810)
[»] chr5 (50 HSPs)
chr5 (338-580)||(15375758-15375999)
chr5 (340-565)||(17431868-17432103)
chr5 (380-566)||(20563969-20564155)
chr5 (343-580)||(24245407-24245655)
chr5 (380-569)||(23388724-23388912)
chr5 (380-569)||(28664799-28664986)
chr5 (348-517)||(19004153-19004332)
chr5 (380-568)||(20858710-20858896)
chr5 (392-569)||(16523677-16523852)
chr5 (367-568)||(20315305-20315517)
chr5 (380-569)||(17314987-17315174)
chr5 (423-580)||(20744532-20744699)
chr5 (367-567)||(24140454-24140658)
chr5 (392-569)||(20549592-20549766)
chr5 (340-571)||(34128622-34128862)
chr5 (354-439)||(17185462-17185547)
chr5 (340-439)||(18208264-18208362)
chr5 (356-439)||(25550519-25550602)
chr5 (340-454)||(18937733-18937846)
chr5 (357-454)||(17171553-17171650)
chr5 (352-566)||(39434460-39434676)
chr5 (340-439)||(22755506-22755605)
chr5 (340-454)||(19283855-19283969)
chr5 (338-439)||(15469919-15470020)
chr5 (485-542)||(18937889-18937945)
chr5 (355-456)||(36175134-36175234)
chr5 (490-568)||(26835796-26835872)
chr5 (381-455)||(15690803-15690877)
chr5 (356-454)||(24266955-24267052)
chr5 (356-454)||(24343586-24343683)
chr5 (357-454)||(34487640-34487736)
chr5 (386-454)||(25402337-25402405)
chr5 (486-570)||(26121197-26121280)
chr5 (357-476)||(19051551-19051669)
chr5 (339-453)||(24852173-24852287)
chr5 (482-571)||(15690916-15691002)
chr5 (479-571)||(18208123-18208212)
chr5 (482-555)||(24265364-24265435)
chr5 (482-555)||(24341995-24342066)
chr5 (482-566)||(36175272-36175354)
chr5 (340-399)||(20744866-20744925)
chr5 (482-557)||(24260655-24260728)
chr5 (357-456)||(26120867-26120965)
chr5 (482-540)||(34487777-34487832)
chr5 (357-438)||(24167600-24167681)
chr5 (339-403)||(19086230-19086294)
chr5 (340-455)||(26121323-26121437)
chr5 (485-515)||(22755664-22755694)
chr5 (399-456)||(24260560-24260617)
chr5 (482-571)||(25402209-25402297)
[»] scaffold0056 (2 HSPs)
scaffold0056 (380-568)||(21301-21488)
scaffold0056 (384-569)||(25015-25199)
[»] chr3 (62 HSPs)
chr3 (380-566)||(16229831-16230016)
chr3 (356-574)||(21301919-21302149)
chr3 (380-569)||(8770044-8770232)
chr3 (381-569)||(8765143-8765330)
chr3 (385-569)||(12754797-12754981)
chr3 (383-569)||(17438305-17438502)
chr3 (340-568)||(19908292-19908531)
chr3 (356-568)||(22349410-22349615)
chr3 (340-570)||(12411136-12411373)
chr3 (367-565)||(932754-932963)
chr3 (380-569)||(20023427-20023615)
chr3 (380-562)||(27413778-27413957)
chr3 (394-569)||(19909847-19910020)
chr3 (367-569)||(4650243-4650450)
chr3 (340-454)||(12805890-12806004)
chr3 (380-569)||(8169910-8170096)
chr3 (354-580)||(16245593-16245829)
chr3 (397-557)||(19576107-19576265)
chr3 (482-570)||(21303228-21303314)
chr3 (380-557)||(19925508-19925697)
chr3 (396-568)||(19167452-19167620)
chr3 (356-580)||(41508368-41508602)
chr3 (380-476)||(8889130-8889226)
chr3 (380-486)||(19171803-19171908)
chr3 (339-453)||(31286017-31286129)
chr3 (472-569)||(8882997-8883094)
chr3 (356-454)||(3116419-3116516)
chr3 (380-453)||(8557130-8557203)
chr3 (340-554)||(20429695-20429920)
chr3 (482-568)||(12805766-12805850)
chr3 (356-454)||(21325341-21325439)
chr3 (356-437)||(10744903-10744984)
chr3 (486-571)||(5508477-5508562)
chr3 (356-436)||(10917919-10917999)
chr3 (354-454)||(18736672-18736771)
chr3 (482-580)||(2167481-2167577)
chr3 (366-439)||(821529-821602)
chr3 (354-439)||(2167632-2167716)
chr3 (482-571)||(10745040-10745127)
chr3 (354-427)||(12759386-12759459)
chr3 (482-569)||(17155931-17156015)
chr3 (380-449)||(28728969-28729038)
chr3 (482-542)||(3116321-3116380)
chr3 (357-453)||(21825870-21825965)
chr3 (482-569)||(21325480-21325565)
chr3 (356-454)||(5508337-5508434)
chr3 (356-454)||(21303354-21303452)
chr3 (513-569)||(7494989-7495045)
chr3 (367-439)||(8319051-8319123)
chr3 (486-552)||(2723727-2723790)
chr3 (482-577)||(8445960-8446053)
chr3 (486-557)||(18736559-18736628)
chr3 (339-429)||(6289887-6289977)
chr3 (357-427)||(13908253-13908322)
chr3 (482-543)||(21825770-21825829)
chr3 (354-409)||(18458469-18458524)
chr3 (511-566)||(19171744-19171799)
chr3 (496-570)||(8143767-8143838)
chr3 (380-434)||(8445848-8445901)
chr3 (358-436)||(10923150-10923228)
chr3 (398-455)||(7495094-7495151)
chr3 (513-569)||(7478229-7478285)
[»] scaffold0638 (1 HSPs)
scaffold0638 (380-569)||(696-897)
[»] scaffold0035 (2 HSPs)
scaffold0035 (356-557)||(69914-70125)
scaffold0035 (446-509)||(98719-98779)
[»] scaffold0671 (1 HSPs)
scaffold0671 (395-569)||(482-655)
[»] scaffold0016 (1 HSPs)
scaffold0016 (380-569)||(3556-3744)
[»] scaffold0034 (1 HSPs)
scaffold0034 (380-569)||(76442-76629)
[»] scaffold0386 (2 HSPs)
scaffold0386 (393-569)||(6589-6764)
scaffold0386 (449-569)||(5979-6098)
[»] scaffold0054 (1 HSPs)
scaffold0054 (482-569)||(72148-72235)
[»] scaffold0622 (2 HSPs)
scaffold0622 (356-438)||(729-811)
scaffold0622 (485-571)||(871-954)
[»] scaffold1869 (1 HSPs)
scaffold1869 (380-569)||(263-463)
[»] scaffold0008 (4 HSPs)
scaffold0008 (380-504)||(234366-234490)
scaffold0008 (340-479)||(48169-48304)
scaffold0008 (340-454)||(54845-54960)
scaffold0008 (485-580)||(55003-55097)
[»] scaffold0263 (1 HSPs)
scaffold0263 (482-569)||(15785-15871)
[»] scaffold0155 (1 HSPs)
scaffold0155 (361-580)||(35857-36088)
[»] scaffold0024 (2 HSPs)
scaffold0024 (482-570)||(39724-39810)
scaffold0024 (356-434)||(39585-39663)
[»] scaffold0957 (1 HSPs)
scaffold0957 (356-570)||(3154-3370)
[»] scaffold0005 (2 HSPs)
scaffold0005 (485-580)||(168162-168256)
scaffold0005 (339-427)||(168326-168413)
[»] scaffold0111 (1 HSPs)
scaffold0111 (481-571)||(3771-3861)
[»] scaffold0001 (3 HSPs)
scaffold0001 (482-557)||(69218-69293)
scaffold0001 (380-455)||(69106-69181)
scaffold0001 (356-439)||(81488-81570)
[»] scaffold0062 (2 HSPs)
scaffold0062 (482-580)||(43090-43187)
scaffold0062 (380-436)||(43245-43301)
[»] scaffold0650 (1 HSPs)
scaffold0650 (356-453)||(6288-6385)
[»] scaffold0941 (1 HSPs)
scaffold0941 (18-104)||(1516-1606)
[»] scaffold0838 (1 HSPs)
scaffold0838 (356-454)||(2371-2469)
[»] scaffold0832 (1 HSPs)
scaffold0832 (356-454)||(2402-2500)
[»] scaffold0102 (2 HSPs)
scaffold0102 (380-454)||(35562-35636)
scaffold0102 (482-569)||(35677-35762)
[»] scaffold0043 (2 HSPs)
scaffold0043 (340-454)||(89854-89967)
scaffold0043 (486-555)||(89742-89809)
[»] scaffold0019 (2 HSPs)
scaffold0019 (381-453)||(11266-11338)
scaffold0019 (355-434)||(181726-181804)
[»] scaffold0136 (1 HSPs)
scaffold0136 (339-425)||(15494-15580)
[»] scaffold0002 (1 HSPs)
scaffold0002 (486-555)||(114631-114699)
[»] scaffold0351 (1 HSPs)
scaffold0351 (482-566)||(5641-5724)
[»] scaffold0672 (1 HSPs)
scaffold0672 (380-439)||(1759-1818)
[»] scaffold0427 (1 HSPs)
scaffold0427 (391-454)||(2818-2881)
[»] scaffold0042 (1 HSPs)
scaffold0042 (357-455)||(29909-30006)
[»] scaffold0098 (1 HSPs)
scaffold0098 (18-104)||(36512-36602)
[»] scaffold0090 (1 HSPs)
scaffold0090 (380-439)||(7427-7486)


Alignment Details
Target: chr2 (Bit Score: 521; Significance: 0; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 20 - 580
Target Start/End: Original strand, 30411343 - 30411903
Alignment:
Q  20 agatcaaaggttggtcctcccaaaccttttagatgagtgctattggaacttcagaggtttatctaatactcccacaaaattagctttaaagaaacttctt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30411343 agatcaaaggttggtcctcccaaaccttttagatgagtgctattggaacttcagaggtttagctaatactcccacaaaattagctttaaagaaacttctt 30411442  T
Q  120 attaaatataagcatgatatatgttttacctatgaaccctagatgtctattaacaatcattcccatagatggctccataaccttggaagaagaagaaccc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30411443 attaaatataagcatgatatatgttttacctatgaaccctagatgtctattaacaatcattcccctagatggctccataaccttggaagaagaagaaccc 30411542  T
Q  220 tttggtctgtcatctctaatatccaaacccaatacaaaatcccttggagttgtgttggtgatttcaatacaatattgggatcaaatgaacacaaaggtat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411543 tttggtctgtcatctctaatatccaaacccaatacaaaatcccttggagttgtgttggtgatttcaatacaatattgggatcaaatgaacacaaaggtat 30411642  T
Q  320 tcatgaacctactaagttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggatt 419  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  30411643 tcatgaacctactaggttactgatggtcggatatgacaagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggatt 30411742  T
Q  420 gtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttaca 519  Q
    ||| |||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411743 gtcatttcgtcccaacaatttgcgttacttatttttgtaattttgacagtataaaagataggttgcaatttttatctgtttgcaacagagcaagtttaca 30411842  T
Q  520 tgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411843 tgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 30411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 336 - 570
Target Start/End: Complemental strand, 27909237 - 27908992
Alignment:
Q  336 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 435  Q
    |||||||||||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| || || | ||||| |||||||    
T  27909237 ttactgatggtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaac 27909138  T
Q  436 aatttgcgtaacttatttttgtaattttgacgatataaaagat------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtt 523  Q
    ||||  ||| |||||||||||||| |||||||||||||||| |            | |||||||||||||||||||||||||||||||||||||| || |    
T  27909137 aattcacgttacttatttttgtaagtttgacgatataaaagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctg-t 27909039  T
Q  524 tttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  27909038 tttggttgcagaaaattaagcagcggttaggattcttcgaatccccc 27908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 360 - 569
Target Start/End: Original strand, 17349362 - 17349573
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 459  Q
    ||||| ||||| ||||| | ||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||| || |||| ||||||||| ||||    
T  17349362 tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttatttt-gtaa 17349459  T
Q  460 ttttgacgatataa---aagata--ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
     || ||||||||||   ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||     
T  17349460 gtt-gacgatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtcaga 17349558  T
Q  555 atttttcgaatcccc 569  Q
    ||| |||||||||||    
T  17349559 attcttcgaatcccc 17349573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 340 - 566
Target Start/End: Complemental strand, 17743590 - 17743354
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  17743590 tgatggtcggatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaatt 17743491  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 529  Q
     | || ||||||||||| || ||| |||||||||||| ||           |||||||||||||||| ||||||||  ||||||||||| ||||||||||    
T  17743490 cgtgttacttatttttgcaagtttaacgatataaaagttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggt 17743391  T
Q  530 tgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    || ||||||| |||| |||||||||||| || |||||    
T  17743390 tgtagaaaaggaagccgcggttaggattatttgaatc 17743354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 29142986 - 29143174
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||  ||||||||||||| |||||| ||| ||||||||  ||||| | ||||||| |||| |||||||||||||| ||||||| |||||||| |     
T  29142986 gtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttgtaagtttgacggtataaaagttt 29143085  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||| ||||||||| |||| |||||||||||    
T  29143086 agttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgtagaaaagtaaacagcggttaagattcttcgaatcccc 29143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 380 - 571
Target Start/End: Original strand, 25530472 - 25530662
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt-aattttgacgatataaaagat 478  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||  | ||||  | | |||||||||||| | |||||| | |||||||| |    
T  25530472 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttatttttgtgagttttgatggtataaaag-t 25530570  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    | |||||||||||||||||||||||||||||| | ||||| || ||||||||||| || |||||||||||||||||||| |||||||||||||    
T  25530571 aagttgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcaaaatagtaagcagcggttaggattcttcgaatccccct 25530662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 340 - 569
Target Start/End: Original strand, 28925507 - 28925746
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||||||||| ||||| || || | |||||||||||||||||||||  | ||||| ||  |||||||||||||||||||||||||    
T  28925507 tgatggtcggatatggcaagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaatt 28925605  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagat------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 527  Q
       || | |||||||||||| ||||||||||||||||||            || ||||||||||||| ||||||||||| ||||||||||| || |||||    
T  28925606 catgttatttatttttgtaagtttgacgatataaaagataaagggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctg-ttttg 28925704  T
Q  528 gttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  28925705 gttgcagaaaagtaagcagaggttaggattcttcgaatcccc 28925746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 580
Target Start/End: Complemental strand, 26603424 - 26603223
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatat---aaaag 476  Q
    |||| ||||||||||||||||||||||||  | | |||||||| |||||| |||||||||  ||| |||||||||||    ||||||| |||   |||||    
T  26603424 gtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttacttatttttgg---tttgacggtatgataaaag 26603328  T
Q  477 atag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgtt 574  Q
    ||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||    
T  26603327 atagatgttgcaatttttatctgtttgcaacagagca-gtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatccccctatt 26603229  T
Q  575 catatt 580  Q
     |||||    
T  26603228 tatatt 26603223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 380 - 571
Target Start/End: Original strand, 25535299 - 25535488
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt-aattttgacgatataaaagat 478  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||| || ||||||| | |||||| |    
T  25535299 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtgaactttgacggt-taaaag-t 25535396  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    | |||||||||||||||| |||||||||| |  | ||||| || ||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  25535397 aagttgcaatttttatctatttgcaacagcgtgaatttacctg-ttttggttgcaaaaaagtaagcagcggttgggattcttcgaatccccct 25535488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 356 - 569
Target Start/End: Complemental strand, 29719329 - 29719106
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  29719329 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttattttt 29719230  T
Q  456 gtaattttgacgatataaaaga----------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
       | ||||||| ||||| | |          |||   |||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  29719229 ---agtttgacggtataataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgcagaaaagtaa 29719133  T
Q  543 gcagcggttaggatttttcgaatcccc 569  Q
    ||||| ||||||||| |||||||||||    
T  29719132 gcagcagttaggattcttcgaatcccc 29719106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 569
Target Start/End: Original strand, 25920303 - 25920478
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 491  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||  ||| |||||||||||||| || |||  |||||||| ||| ||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttgtaagtt-gacattataaaagttag-ttgcaatttt 25920400  T
Q  492 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||| | ||| |||| || ||||||||    
T  25920401 tatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatcccc 25920478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 580
Target Start/End: Complemental strand, 17675744 - 17675491
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||| || |||||||| ||| ||||||||| ||||||||||||||| ||| ||      
T  17675744 tgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaac 17675645  T
Q  440 tg-cgtaacttatttttgtaattttgacgatataaaagata-------------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 525  Q
    |  ||| |||||||||||||| || |||||| |||||||||             ||||||||||||||||||||||||||||||||||||||| || |||    
T  17675644 tcacgttacttatttttgtaagtt-gacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttt 17675547  T
Q  526 tggttgcagaaaagtaagcagcggttaggatttttcgaa-tccccctgttcatatt 580  Q
    ||||||||||||| ||| |||||||||| |||||||||| |||||||||| |||||    
T  17675546 tggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttatatt 17675491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 580
Target Start/End: Complemental strand, 17635889 - 17635637
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||| || |||||||| ||| |||| |||| ||||||||||||||| ||| || |    
T  17635889 tgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaact 17635790  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagata-------------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 526  Q
      ||| |||||||||||||| || |||||| |||||||||             ||||||||||||||||||||||||||||||||||||||| || ||||    
T  17635789 cacgttacttatttttgtaagtt-gacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-tttt 17635692  T
Q  527 ggttgcagaaaagtaagcagcggttaggatttttcgaa-tccccctgttcatatt 580  Q
    ||||||||| || ||| |||| ||||| |||||||||| |||||||||| |||||    
T  17635691 ggttgcagataaataaacagcagttagaatttttcgaattccccctgtttatatt 17635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 356 - 569
Target Start/End: Original strand, 15339239 - 15339463
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||| |||     
T  15339239 caagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttacttacttt- 15339337  T
Q  456 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||| ||  | |||||||   |||||| |          ||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  15339338 gtaagtta-aggatataataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttgcagaaaagtaa 15339436  T
Q  543 gcagcggttaggatttttcgaatcccc 569  Q
    ||||| ||||||||| ||| |||||||    
T  15339437 gcagcagttaggattcttcaaatcccc 15339463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 24091000 - 24090813
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||||   || |||||||||||||| ||||||| |||||||   |    
T  24091000 gtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaa-tga 24090902  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||||||||||||| | ||||||| |  || | ||||| || |||||||||||||||||||||||| |||||||||  |||||||||||    
T  24090901 agttgcaatttttatatttttgcaaaactgcgaatttacctg-ttttggttgcagaaaagtaagcagtggttaggatgcttcgaatcccc 24090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 570
Target Start/End: Original strand, 25618581 - 25618781
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa------ 473  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||| |||||||||||||||      ||||||||||||          
T  25618581 gtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttatttttag----ttgacgatataataaaag 25618676  T
Q  474 ------aagatagg---ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 564  Q
          ||| |||    |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| | ||| ||||||    
T  25618677 agtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-ttttggttgcagaaaagtaagcagcggttcgaattcttcgaa 25618775  T
Q  565 tccccc 570  Q
    ||||||    
T  25618776 tccccc 25618781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 551
Target Start/End: Complemental strand, 31804973 - 31804791
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aaga 477  Q
    ||||||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||| || || |||||||||||||| || ||||||||||   ||||    
T  31804973 taataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaagtt-gacgatataataaaaga 31804875  T
Q  478 tagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 551  Q
    || |          ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||    
T  31804874 taagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 367 - 563
Target Start/End: Original strand, 25196022 - 25196229
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    |||| ||||| | ||||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||  ||| |||||||||| | |  |||||    
T  25196022 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttttattaagttgac 25196121  T
Q  467 gatataaaagata--gg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
    |||||| ||| ||  ||          ||| ||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||||| |||||||    
T  25196122 gatatataagttaatggttaaaaagacttgaaatttttatatgtttgcaacatagcaagtttacctg-ttttggttgcaaaaaagtaagcagtggttagg 25196220  T
Q  555 atttttcga 563  Q
    ||| |||||    
T  25196221 attcttcga 25196229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 569
Target Start/End: Original strand, 17197906 - 17198081
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 491  Q
    |||||||||||| ||||| || | ||||||| |||||||| |||||||  |||  ||||||||||||| || |||  ||||||||  || |||||| |||    
T  17197906 taagtagagtattgtatccacggagattgtcctttcgtccgaacaattctcgtttcttatttttgtaagtt-gacagtataaaagtgag-ttgcaacttt 17198003  T
Q  492 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||| ||||||| |||||| | || || | ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  17198004 tatcagtttgcagcagagcgaattcacctatttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccc 17198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 357 - 455
Target Start/End: Complemental strand, 45621978 - 45621880
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||| ||||| ||||| | |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||||||    
T  45621978 aagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 25887864 - 25887777
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||| ||| |||| ||| ||||||||    
T  25887864 ttgcaatttttatctgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaatccccc 25887777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 577
Target Start/End: Complemental strand, 23933505 - 23933412
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||| || ||||||||||||||||||||||| || |||||||||| |||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaagtt-acttggttt-ggtttcacaaaagtaagcagcggttaggattctttgaatccccctattcat 23933412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 357 - 439
Target Start/End: Complemental strand, 20174732 - 20174650
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||| ||||| ||||| | ||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||    
T  20174732 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaatt 20174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 32085602 - 32085673
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    |||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||    
T  32085602 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-gtttggttgcagaaaagtaagcagcggttagga 32085673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 12953392 - 12953293
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||  | |||||||||| ||||||||||||| || || ||| |||||||||||||||| |||||||| |||| ||||||||||    
T  12953392 caagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 12953290 - 12953225
Alignment:
Q  497 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcg 562  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattcttcg 12953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 26667342 - 26667519
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| ||||||||| || |||||| | |||||||  ||| |||||||||||||| || |||| ||| ||||      
T  26667342 gtaataaagttagtaagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttgtaagtt-gacggtatcaaagt- 26667439  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||||||||||           ||||| ||| | ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  26667440 -ggttgcaatttc----------caacatagcgattttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccc 26667519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 32085448 - 32085544
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    ||||||||||||  |  |||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  32085448 tgatggtcggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaaca 32085544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 577
Target Start/End: Original strand, 45553268 - 45553360
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    ||||||||||||||||||||||||| |||||| |||| || |||||||||||| || || |||||||||||||||| || |||||||||| |||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaag-ttacctg-ttttggttgcag-aacgttagcagcggttaggattctttgaatccccctattcat 45553360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 455
Target Start/End: Complemental strand, 9774405 - 9774334
Alignment:
Q  382 aataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||||||  ||||||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||||||    
T  9774405 aataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttt 9774334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 454
Target Start/End: Complemental strand, 25885553 - 25885460
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||| ||||| ||||| | ||||||| |||||||| | ||||||||||| ||| | ||||||||||||||||||||||||| || |||||||||    
T  25885553 tgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 8503168 - 8503071
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| ||||| ||||| | ||||||| ||||||||||||| ||| |||| ||| |||||||| ||||  ||||||||||||||| ||| ||||    
T  8503168 caagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaattt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 19200232 - 19200152
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||||||||| |||||||||    
T  19200232 caagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaa 19200152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 23011860 - 23011764
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| |||| |||||| | ||||||||||| |||||||| ||| ||||| ||| |||||||||||| ||| ||||||||||||| | ||||||    
T  23011860 caagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttattt 23011764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 25888318 - 25888224
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||  ||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||    ||||||||| |||| |||||||||    
T  25888318 caagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgttacttatttt 25888224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 455
Target Start/End: Complemental strand, 11382852 - 11382752
Alignment:
Q  355 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||  ||||| ||||| || |||||||||||||||||||||||| |||| ||| | |||||  |||| |||||| |||| |||| |||||||||    
T  11382852 acaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttt 11382753  T
Q  455 t 455  Q
    |    
T  11382752 t 11382752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 542
Target Start/End: Original strand, 13776476 - 13776536
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||||||||    
T  13776476 ttgcaatttttatctgtttgcaacagagtaagattacctgttttttgttccagaaaagtaa 13776536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 45553131 - 45553214
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||  | |||||||||||||||||| | ||||||||  |||||||||||||||| |||||| |||||    
T  45553131 caagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaatt 45553214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 13776324 - 13776420
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||| ||  ||||||||||  ||||| |||| ||  |||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||||    
T  13776324 tgatggtcgaattagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaa 13776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 17889922 - 17890034
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||   |||||||||| ||||| |||||||  ||||| |||| ||||||| ||||| |||  | ||||||||||||||||  |||||||||    
T  17889922 tgatggtcggattatacaagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcgatcaaacaatt 17890020  T
Q  440 tgcgtaacttattt 453  Q
    ||||| | ||||||    
T  17890021 tgcgttaattattt 17890034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 17890075 - 17890162
Alignment:
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||| |||||||||||||||||| |||| || ||||||||||||||| ||||||| || ||| |||| ||  ||||||||    
T  17890075 gttgcaatttttatatgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagcaacgattaagattctttcaatccccc 17890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 542
Target Start/End: Complemental strand, 11382713 - 11382654
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  11382713 ttgcaaattttatctgtttgcaacagagcaag-ttacttgttttttgttgtagaaaagtaa 11382654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 28770538 - 28770458
Alignment:
Q  359 gtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||| ||||| ||||| |  ||||||||||||||||||||||||||||| | ||| | |||| |||| |||||||||||    
T  28770538 gtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaatt 28770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 453
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  395 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||| |||  |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 27418391 - 27418465
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||||||||||| |||| ||| ||||| || ||||  |||||||||| | || |||||||||    
T  27418391 gtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 8447147 - 8447079
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 425  Q
    ||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||| ||| |||||||||||    
T  8447147 caagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgtt 8447079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 12557823 - 12557736
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    |||||||||||| | | ||||||||| ||||||||||| | ||||||||||| |||||||| ||||| ||| ||| |||||| ||||||    
T  12557823 tgatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgtttc 12557736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 525
Target Start/End: Complemental strand, 45621838 - 45621799
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttt 525  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  45621838 aatttttatctgtttgcaacatagcaagtttacttgtttt 45621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 453
Target Start/End: Original strand, 5777253 - 5777314
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||| ||||||| ||| | | |||||||||||||||||||||||||  ||| ||||||||    
T  5777253 taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 454
Target Start/End: Complemental strand, 28606239 - 28606178
Alignment:
Q  393 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||| ||  |||||||||||||||| |||||  | |||| |||||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttatttt 28606178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 514
Target Start/End: Original strand, 29027635 - 29027667
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagt 514  Q
    ||||||||||||||||||||||| |||||||||    
T  29027635 ttgcaatttttatctgtttgcaagagagcaagt 29027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 7e-72; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 356 - 580
Target Start/End: Original strand, 21449090 - 21449314
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  || ||||||||||    
T  21449090 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttattttt 21449189  T
Q  456 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  21449190 gtaagtttgacggtataaaagataggtt-caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaagtaagcagcggttagga 21449288  T
Q  556 tttttcgaatccc-cctgttcatatt 580  Q
    || |||||||||| |||||| |||||    
T  21449289 ttcttcgaatccctcctgtttatatt 21449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 340 - 569
Target Start/End: Complemental strand, 18736354 - 18736126
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||||||||| ||||| ||||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  18736354 tgatggtcggatatggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatt 18736255  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
    | ||| |||||||||||| |  |||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  18736254 tccgttacttatttttgt-aggttgacggtataaaatttaggttgcaaattttatctgtttgcaatagagcaagtttacctatttttggttgcagaaaag 18736156  T
Q  540 taagcagcggttaggatttttcgaatcccc 569  Q
    || |||||||| |||||| |||||||||||    
T  18736155 taggcagcggtaaggattcttcgaatcccc 18736126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 340 - 570
Target Start/End: Complemental strand, 17610370 - 17610129
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17610370 tgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 17610271  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
      ||| |||||||||||||| ||||||||||||||           ||| || ||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  17610270 cacgttacttatttttgtaagtttgacgatataaaagttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttgg 17610171  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||||||||||||||||||| || ||| |||||    
T  17610170 ttgcagaaaagtaagcagcggttaggattctttgaaaccccc 17610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 340 - 556
Target Start/End: Original strand, 29242504 - 29242718
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||||||||| ||||  ||||  | |||||||||||||||||||||||||||||| | || |||||||||||| |||||||||||    
T  29242504 tgatggtcggatatggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaatt 29242603  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
     |||| || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  29242604 cgcgttacatatttttgtaa-gttgacgatataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaag 29242701  T
Q  540 taagcagcggttaggat 556  Q
    |||| ||||||||||||    
T  29242702 taagaagcggttaggat 29242718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 346 - 557
Target Start/End: Complemental strand, 21988090 - 21987880
Alignment:
Q  346 tcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgta 445  Q
    ||||||||| ||||||||| ||||| ||||| |  |||||||||||||||||||||||||||||  | | ||||||| |||||||||| ||||| ||||     
T  21988090 tcggatatggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgtt 21987991  T
Q  446 acttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 545  Q
    ||||||||||||||  | |||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  21987990 acttatttttgtaagct-gacggtataaaagttaggttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagtaagca 21987892  T
Q  546 gcggttaggatt 557  Q
    ||||| ||||||    
T  21987891 gcggtaaggatt 21987880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 340 - 571
Target Start/End: Complemental strand, 15544080 - 15543839
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||| ||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||    
T  15544080 tgattgtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaatt 15543981  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagata-----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
     | || |||||||||| ||| |||||||||||||||||||            |||||||||||||| ||||||||||| || |||||||| ||||||| |    
T  15543980 cgtgttacttatttttttaa-tttgacgatataaaagataagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttg 15543882  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  15543881 ttgcagaaaagtaagcaacggttaggattcttcgaatccccct 15543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 340 - 570
Target Start/End: Original strand, 12208586 - 12208827
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  12208586 tgatggtcagatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaatt 12208685  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 526  Q
     |||| ||||||||||||||  |||||||||||||||||             ||||| || |||| |||||||||||||||||||||||||| || ||||    
T  12208686 cgcgttacttatttttgtaa-gttgacgatataaaagataaaagggttagaaaggtttcagttttaatctgtttgcaacagagcaagtttacctg-tttt 12208783  T
Q  527 ggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
     | |||||||||||||||||||||||||||| ||||||||||||    
T  12208784 agctgcagaaaagtaagcagcggttaggattcttcgaatccccc 12208827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 16917008 - 16916820
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| |||||||||||| |||||||| |||||||  ||| |||||||||| ||  || |||| |||||||| |    
T  16917008 gtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttttataggtt-gacggtataaaagtt 16916910  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    || ||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  16916909 ag-ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatcccc 16916820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 351 - 557
Target Start/End: Complemental strand, 25405733 - 25405517
Alignment:
Q  351 tatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta 450  Q
    |||| ||||||||| || || ||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||  ||| |||||    
T  25405733 tatggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttactta 25405634  T
Q  451 tttttgtaattttgacgatataaa------------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 538  Q
    |||||||||  |||||||||||||            ||| || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||    
T  25405633 tttttgtaa-gttgacgatataaaagtttaagggttagaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcag-aaa 25405536  T
Q  539 gtaagcagcggttaggatt 557  Q
    |||||||||||||||||||    
T  25405535 gtaagcagcggttaggatt 25405517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 727492 - 727680
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||| ||| ||| |||||    |||||||| |||||||   || |||||||||||| | |||||||||||||||||||    
T  727492 gtaataaagtgataagtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttatttttgttagtttgacgatataaaagata 727591  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||| ||||||||||| || || ||||| || |||||||||||||||   |||||||||||| |||| |||||||||||    
T  727592 ggttgcaatttttatttgtttgcaacatagaaaatttacctg-ttttggttgcagaaagtaaagcagcggttaagattcttcgaatcccc 727680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 380 - 565
Target Start/End: Complemental strand, 16069625 - 16069440
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| | |||| |||  |||||||||||||||||||   |||||||   || |||||||||||||| |||| || ||||||||  |    
T  16069625 gtaataaagtgataagtaaaatatcatatacacagggattgtcgtttcgtttgaacaattcttgttacttatttttgtaagtttggcggtataaaagtaa 16069526  T
Q  480 ggttgcaa-tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 565  Q
    |||||||| |||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||| |||||||    
T  16069525 ggttgcaaatttttatctgcttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 18825680 - 18825868
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| ||||||||||| ||| || ||||| ||| || | |||||||| ||| ||||| |||| ||| |||||||||| ||||| ||    
T  18825680 gtaataaagtgataagtaaagtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaattttataagtttgacgatacaaaagtta 18825779  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| |||||||||||||||| | |||||| || ||||||||    
T  18825780 agttgcaatttttatctgtttacaacaaagcaaatttacttg-ttttggttgtagaaaagtaagcagcgataaggattctttgaatcccc 18825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 358 - 557
Target Start/End: Original strand, 16179010 - 16179219
Alignment:
Q  358 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt 457  Q
    ||||||| ||||| ||||  | |||||||| ||||||||||||||||||||| | | |||  ||||||||||||||||||||   || ||||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  458 aattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcag 546  Q
    || || |||||||||||| ||| |           |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  16179110 aagtt-gacgatataaaatataagggttagatgtcttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcag 16179208  T
Q  547 cggttaggatt 557  Q
    |||||||||||    
T  16179209 cggttaggatt 16179219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 380 - 566
Target Start/End: Original strand, 24054004 - 24054188
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||| |||||||||||||| |||| |||||||||||| |||||||  ||||||||  || |||||||| ||||| ||||||| |||||||||||    
T  24054004 gtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttatgtaagtttgacggtataaaagata 24054102  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    | || |||||||||||||||||||||||||| | ||||| || |||||||||  |||||| ||||  | ||||||||| ||||||||    
T  24054103 gatttcaatttttatctgtttgcaacagagcgaatttacttg-ttttggttgttgaaaagaaagcgacagttaggattcttcgaatc 24054188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 380 - 568
Target Start/End: Original strand, 18830506 - 18830693
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||| |||||||||  || | ||||||||| |||||||||||| ||||||||||||||||    | |||||||||| ||||||||||| |||||||| ||    
T  18830506 gtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaattctttttacttatttttttaattttgacggtataaaagtta 18830605  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
     |||||||||| |||||||||||||||||| || ||||| || ||||||||||| ||||||||||| |  ||| ||||||| |||||||    
T  18830606 agttgcaatttctatctgtttgcaacagagaaattttacctg-ttttggttgcataaaagtaagcaacatttatgattttttgaatccc 18830693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 23179822 - 23180009
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | ||| ||||||||| |||| |||||||||||| |||||||| |||||||  ||| | |||||||||||| ||||||| |||||||| |    
T  23179822 gtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttttgtaagtttgacggtataaaag-t 23179920  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    | |||||||||||||||||||| ||| | | ||| ||||| | |||||||||| |||||||||||||||||| |||||| |||||||||||    
T  23179921 a-gttgcaatttttatctgtttacaaaataacaattttacct-tttttggttggagaaaagtaagcagcggtaaggattattcgaatcccc 23180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 14781927 - 14781740
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||  |||||||||||||||||| ||| | |||||| |||||||| || ||||   |  |||||||||||||| |||||| | | ||||| ||    
T  14781927 gtaataaagtagtaagtagagtatcgtatccacaagaattgtcctttcgtccgaaaaattctagatacttatttttgtaagtttgacaagaaaaaag-ta 14781829  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    | ||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| | |||| ||||||||| |||||||||||    
T  14781828 g-ttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaatcccc 14781740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 358 - 569
Target Start/End: Original strand, 9401511 - 9401730
Alignment:
Q  358 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt 457  Q
    ||||||| ||||  ||||| ||||||||||||   ||||||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||    
T  9401511 agtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgt 9401607  T
Q  458 aattt--tgacgatataaaagatag----------gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 545  Q
    || ||  |||    ||||||||||           ||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||||||| |    
T  9401608 aagttgttgatataataaaagataacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctg-ttttggttacaaaaaagtaagta 9401706  T
Q  546 gcggttaggatttttcgaatcccc 569  Q
    |||||||||||| |||||||||||    
T  9401707 gcggttaggattcttcgaatcccc 9401730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 21666682 - 21666483
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||  ||| |||||||||| |||  ||||||||||||||||||    
T  21666682 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataa-gttgacgatataaaagata 21666584  T
Q  480 --ggtt----------gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 567  Q
      ||||          | ||||||||||||||||||| | | ||||||||| || ||||||||| |||||||||||||  |||||||||| |||||||||    
T  21666583 agggttaaaaagactagtaatttttatctgtttgcaagacaacaagtttacctg-ttttggttgtagaaaagtaagcaatggttaggattcttcgaatcc 21666485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 340 - 475
Target Start/End: Original strand, 14779550 - 14779684
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||||||||| ||||| ||||| | ||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||  |    
T  14779550 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatat 14779649  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaa 475  Q
     |||| | ||||||||||||  ||||||||||||||    
T  14779650 cgcgttatttatttttgtaa-gttgacgatataaaa 14779684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 356 - 569
Target Start/End: Original strand, 17359163 - 17359386
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | ||||||||||||||||| ||||||| |||| | |  ||||||||||||||||||| ||||  ||| ||||||||||    
T  17359163 caagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttattttt 17359262  T
Q  456 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
       |  ||||||||||||   |||||| |          |||||||||||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||    
T  17359263 ---aggttgacgatataataaaagataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgcataaaagtaa 17359359  T
Q  543 gcagcggttaggatttttcgaatcccc 569  Q
    |  |||||||||||| |||||||||||    
T  17359360 gatgcggttaggattcttcgaatcccc 17359386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 357 - 557
Target Start/End: Complemental strand, 31236145 - 31235935
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    ||||||||  |||| ||||||| |||||||||||||||| |||||||  |||| |||  ||||||||||| ||||||| |||| |||| ||||||||||     
T  31236145 aagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttattttt- 31236047  T
Q  457 taattttgacgatataaaaga----------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
      |  |||||||||||| | |          |||   |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  31236046 --aagttgacgatataataaaatataagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaag 31235949  T
Q  544 cagcggttaggatt 557  Q
    || |||||| ||||    
T  31235948 caacggttaagatt 31235935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 18100973 - 18100888
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||| || ||||||||    
T  18100973 ttgcaatttttatctgtttgcaacatagcaagtt-acatgtttt-ggttgcagaaaagtaagcagcggttatgattatttgaatcccc 18100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 13345434 - 13345337
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||||||| |||| ||||||||    
T  13345434 caagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 570
Target Start/End: Complemental strand, 21334793 - 21334591
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| |||||||||||   ||| |||||| |||| |||||||||||  ||| |||||||||| ||| || ||||||||||||||||    
T  21334793 gtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttttttaagtt-gacgatataaaagata 21334695  T
Q  480 ----ggttgcaa----------tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 565  Q
        | ||| ||          ||||||||||||||||| | |||||||| || | |||||||||| |||||||||| |||||||||||||| |||||||    
T  21334694 aatggtttgaaagtcttacaattttttatctgtttgcaaaatagcaagtt-acctatttttggttgaagaaaagtaaacagcggttaggattcttcgaat 21334596  T
Q  566 ccccc 570  Q
    |||||    
T  21334595 ccccc 21334591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 22623029 - 22623115
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||| |||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||||||    
T  22623029 ttgccatttttatatatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagctgttaggattcttcaaatcccc 22623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 342 - 453
Target Start/End: Complemental strand, 24306417 - 24306307
Alignment:
Q  342 atggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttg 441  Q
    |||||||||| || ||||||||| || || ||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||  ||||| |||| |    
T  24306417 atggtcggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcg 24306319  T
Q  442 cgtaacttattt 453  Q
    ||| ||||||||    
T  24306318 cgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 455
Target Start/End: Complemental strand, 51473950 - 51473875
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||| |||| |||||    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttttt 51473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 3591767 - 3591654
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||||| |||||||||||||| |||  ||||||||||| ||||||||||||    
T  3591767 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaatt 3591668  T
Q  440 tgcgtaacttattt 453  Q
     || | ||||||||    
T  3591667 cgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 456
Target Start/End: Complemental strand, 16787800 - 16787724
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||||||||||||||||||||||||  |||  ||||||||||| | ||||||||||||||| |||||||||||    
T  16787800 gtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttttg 16787724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 571
Target Start/End: Complemental strand, 21973164 - 21973077
Alignment:
Q  484 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccct 571  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaagtt-acctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatccccct 21973077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 23038109 - 23038012
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  23038109 caagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttatttt 23038012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 17837502 - 17837615
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||  ||||| | |||||||||| |||||||||||||| |||| ||| |||||||| ||| ||| ||||||||    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaatt 17837601  T
Q  440 tgcgtaacttattt 453  Q
     |||| ||||||||    
T  17837602 cgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 22664346 - 22664417
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  22664346 ttgcaatttttatttgtttgtaacagagcaagtt-acatgtttt-ggttgcagaaaagtaagtagcggttagga 22664417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 17121460 - 17121378
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    ||||| |||| || ||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  17121460 ttgcatttttcatttgtttgcaatagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatc 17121378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 27117832 - 27117720
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||| ||| ||||| ||||| | |||||||||||||||||||||||| ||||  ||| | |||||||||||  |||||||||     
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatc 27117733  T
Q  440 tgcgtaacttatt 452  Q
    ||||| |||||||    
T  27117732 tgcgttacttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 566
Target Start/End: Original strand, 28008244 - 28008326
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    ||||||||||||||||||| ||| ||||||| || || |||||| ||||||||||||||||||||||||||||||| || |||||    
T  28008244 ttgcaatttttatctgtttccaatagagcaaatt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattctttgaatc 28008326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 485 - 556
Target Start/End: Complemental strand, 18529149 - 18529079
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggat 556  Q
    |||||||||||  ||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagtggttaggat 18529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 21847635 - 21847717
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||| | ||||||||||  |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  21847635 caagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaatt 21847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 498 - 557
Target Start/End: Complemental strand, 25404036 - 25403977
Alignment:
Q  498 tttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||    
T  25404036 tttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggatt 25403977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 32382968 - 32382883
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||||||||||||||||  |||| || ||||||||||||||| || |||||| ||||||||| || ||||||||    
T  32382968 ttgcaatttttatctgtttgcaacagagcaa-attacctg-ttttggttgcagaaatgttagcagccgttaggattctttgaatcccc 32382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 454
Target Start/End: Original strand, 24281282 - 24281376
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||| ||||| ||||||  ||| |||||||||||| |||||||||    
T  24281282 tgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttacttatttt 24281376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 15807980 - 15807895
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| ||||||||||||||||||||  ||   ||||||||| |||||| ||||||||| |||||||| || ||||||||    
T  15807980 ttgcaatttttatttgtttgcaacagagcaagttacca--gttttggttgtagaaaaataagcagcgattaggattctttgaatcccc 15807895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 9787839 - 9787769
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 553  Q
    |||||||||| | ||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||    
T  9787839 ttgcaattttgaactgtttgcaacagagcaagtg-acctgtttttggttgcagaaaagtaagttgcggttag 9787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 15813268 - 15813155
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||||||| || ||||||||| ||| ||||| ||||| ||||||||||| |    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaact 15813170  T
Q  440 tgcgtaacttatttt 454  Q
      ||| |||||||||    
T  15813169 ctcgttacttatttt 15813155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 360 - 454
Target Start/End: Original strand, 22664211 - 22664305
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||| |||| || |||||| || ||||||| |||||| | ||||  ||||||||    
T  22664211 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgcttatttt 22664305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 44795354 - 44795447
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    |||| |||||||  |||||||||||  || | ||||| | ||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  44795354 tgatagtcggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 9787977 - 9787896
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||| ||||| ||||  | |||||||||||||||||||||||||||||| | |   |||||||||||||| ||||||    
T  9787977 caagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaa 9787896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 571
Target Start/End: Complemental strand, 12012773 - 12012686
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||| ||||||||||| ||| |||| || |||||| ||||||| |||||||| || || |||||||| |||||||||||||    
T  12012773 ttgcaatttttatttgtttgcaacatagcgagtt-acctgtttt-ggttgcacaaaagtaaacaacgattaggattcttcgaatccccct 12012686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 23037969 - 23037884
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 570  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||||||||| |||| ||| ||||  |||||| ||||||||||||    
T  23037969 caatttttttctgtttgcaacatagcaag-ttacttgtttttggttgcagaaatgtaa-cagtggttagaggattcttcgaatccccc 23037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 22620287 - 22620362
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||||| |||||||||||||| | ||| |||||| ||||||| ||| ||||  ||| ||||||||||    
T  22620287 gtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttattttt 22620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 22622915 - 22622990
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||| ||||||||||| ||||   |||||||||| ||||||||||| |||| |||| ||||| ||||    
T  22622915 gtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttt 22622990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 33190820 - 33190889
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    ||||||||| |||||||||||| ||||||| || || ||| | |||||||||||||||||||||||||||||    
T  33190820 aatttttatttgtttgcaacagtgcaagtt-acctggttt-gattgcagaaaagtaagcagcggttaggatt 33190889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 24214569 - 24214643
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||||||||| ||||  ||||| ||| ||||||| |||||||| |||||| || ||| |||||||||    
T  24214569 gtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttatttt 24214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 26540880 - 26540993
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||| | | ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || || |  | | |||||    
T  26540880 tgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattccaactagacaat 26540978  T
Q  439 ttgcgtaacttattt 453  Q
    |||||| ||||||||    
T  26540979 ttgcgttacttattt 26540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 533 - 570
Target Start/End: Complemental strand, 13345248 - 13345211
Alignment:
Q  533 agaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13345248 agaaaagtaaacagcggttaggatttttcgaatccccc 13345211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 545
Target Start/End: Original strand, 14779702 - 14779766
Alignment:
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 545  Q
    ||||||||||||||| ||||| ||||| | ||||||||| || ||||||||| |||||||||||||    
T  14779702 ggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagtaagca 14779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 523 - 571
Target Start/End: Complemental strand, 15813463 - 15813415
Alignment:
Q  523 ttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  15813463 ttttggttgcagaaaagtaagcagcagttagtattcttagaatccccct 15813415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 26649070 - 26648971
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||  ||||| ||||| | |||||||| |||||||| || ||| ||||| ||| ||||| ||||||||||||||||| | |||| | ||||||    
T  26649070 gacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatttattt 26648972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 545
Target Start/End: Original strand, 16360010 - 16360071
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 545  Q
    ||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||| |||||    
T  16360010 ttgcaatttttatttgtttgcaacaaagcaag-ttacctg-ttttggttgcagaaaagaaagca 16360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 25961085 - 25961038
Alignment:
Q  524 tttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    |||||||||||||||||||| ||||||||||| | || ||||||||||    
T  25961085 tttggttgcagaaaagtaagaagcggttaggactctttgaatccccct 25961038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 147656 - 147730
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||| ||||||| |||  ||| |||||||| ||||||| |||||  | |||| |||||||||    
T  147656 gtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttatttt 147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 455
Target Start/End: Complemental strand, 15813597 - 15813523
Alignment:
Q  382 aataaagtgataa-gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||| ||||||||| ||||| ||| ||||||||||||| |  |||||||| | || ||||||||||    
T  15813597 aataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgttacttattttt 15813523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 33190662 - 33190776
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  |||| |||||| ||||| ||||  | |||||||| |||||||||||||||  |||| |||   ||||||||||| || |||||| |    
T  33190662 tgatggtcggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaact 33190761  T
Q  440 tgcgtaacttatttt 454  Q
     | || |||||||||    
T  33190762 cgtgttacttatttt 33190776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 32383096 - 32383047
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcg 405  Q
    ||||||||| ||||| ||||| | ||||||||||||||| ||||||||||    
T  32383096 caagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 5e-70; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 340 - 570
Target Start/End: Complemental strand, 19492814 - 19492585
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||  ||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||| ||| | ||||||||||| |||||||||||    
T  19492814 tgatggtcggatatatcaagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaatt 19492715  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
     |||| |||||||||||||  || ||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  19492714 cgcgttacttatttttgtaggtt-gacaatataaaagttaggttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaag 19492616  T
Q  540 taagcagcggttaggatttttcgaatccccc 570  Q
    ||||| |||||||||||| ||||||||||||    
T  19492615 taagcggcggttaggattcttcgaatccccc 19492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 340 - 571
Target Start/End: Original strand, 13908839 - 13909081
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||  ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13908839 tgatggtcgaatatagcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 13908938  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaag-atagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
     | || ||||||||||||||||||||||||||||||| | |||          ||||||||||||||||||||||||||||||||||||| |||||||||    
T  13908939 cgtgttacttatttttgtaattttgacgatataaaagtaaaggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgg 13909038  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||| ||||||||||||||||||||||| || ||||||||||    
T  13909039 ttgcaaaaaagtaagcagcggttaggattctttgaatccccct 13909081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 340 - 571
Target Start/End: Original strand, 15164752 - 15164992
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||||||||||||| ||||| ||||| | ||||| || | ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  15164752 tgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatt 15164851  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 529  Q
    ||||| |||||||||||||| |||||||||||||||| ||           |||||||||||||| ||||||||||||||||||||||| || |||||||    
T  15164852 tgcgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggt 15164950  T
Q  530 tgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||  | ||||||  || |||||||||||||    
T  15164951 tgcagaaaagtaagtggaggttagttttcttcgaatccccct 15164992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 356 - 567
Target Start/End: Complemental strand, 13692767 - 13692557
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| | || ||||||||||    
T  13692767 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattttt 13692668  T
Q  456 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    |||  || || | ||||||| ||||||||||||||||||  ||||| || ||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  13692667 gtaggtt-gaaggtataaaatataggttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaagtaagcagtagttagga 13692569  T
Q  556 tttttcgaatcc 567  Q
    || |||||||||    
T  13692568 ttcttcgaatcc 13692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 339 - 569
Target Start/End: Original strand, 7582281 - 7582522
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    ||||||||||||||||  |||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  7582281 ctgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaat 7582380  T
Q  439 ttgcgtaacttatttttgtaattttgacgatataaaagat---agg--------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 527  Q
     ||| | ||||||||| |||| ||||||||||||||||||   |||        |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  7582381 ctgcattacttattttggtaagtttgacgatataaaagataaaaggcttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttg 7582480  T
Q  528 gttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||| ||||||| |||||||||| || ||||||||    
T  7582481 gttgcagaaaaataagcagtggttaggattctttgaatcccc 7582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 569
Target Start/End: Complemental strand, 17026394 - 17026218
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 491  Q
    |||||||||||||||||  ||| |||||||| ||||||   |||||||   || |||||||||||||| ||||||  ||||||||  || ||||| ||||    
T  17026394 taagtagagtatcgtattcacatggattgtcctttcgtgggaacaattctagttacttatttttgtaagtttgacagtataaaagtgag-ttgcagtttt 17026296  T
Q  492 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  17026295 tatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatcccc 17026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 580
Target Start/End: Original strand, 17216802 - 17217058
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||| |||||| ||| ||||| ||||| ||||| | | ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17216802 tgatggtcagatatggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaatt 17216901  T
Q  440 tgcgtaacttatttttgtaattttgacgatataa---aagatag------------gttgcaatttttatctgtttgcaacagagcaagtttacatgttt 524  Q
      ||| |||||| ||||||| || || |||||||   ||||||             ||||||||||||||||||||||||||||||||||||||||| ||    
T  17216902 ctcgttacttatatttgtaagtt-gatgatataatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatg-tt 17216999  T
Q  525 ttggttgcagaaaagtaagcagcggttag---gatttttcgaatccccctgttcatatt 580  Q
    ||||||| ||||||||||||| |||||||   |||| ||||||| |||||||| |||||    
T  17217000 ttggttgtagaaaagtaagcaacggttaggatgattcttcgaattcccctgtttatatt 17217058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 527
Target Start/End: Complemental strand, 16730513 - 16730316
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| || |||||| |||||  |||| | | || ||||||||||||||||||||||||| | | ||||| ||||||||||||||||| |    
T  16730513 tgatggtcggatatggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaact 16730414  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagat----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 527  Q
     |||| |||||||||||||| |||||| ||||||||| |          | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  16730413 cgcgttacttatttttgtaagtttgacaatataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttg 16730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 569
Target Start/End: Complemental strand, 19562276 - 19562049
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || ||| | ||||||||||| |||||||||||||  | ||||||||||    
T  19562276 caagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattttt 19562177  T
Q  456 gtaattttgacgatataa---aagata----ggtt--------gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 540  Q
     ||| ||||||  |||||   ||||||    ||||        ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  19562176 -taagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttttggttgcagaaaagt 19562078  T
Q  541 aagcagcggttaggatttttcgaatcccc 569  Q
    || |||||||||| ||| |||||||||||    
T  19562077 aatcagcggttagaattcttcgaatcccc 19562049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 569
Target Start/End: Original strand, 17709758 - 17709978
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| | |||||||||  ||| |||   ||||||  ||| ||||||||||    
T  17709758 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttattttt 17709854  T
Q  456 gtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
     |||||| |||||||||||||||| |            ||| ||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  17709855 ataattt-gacgatataaaagataagggttaaaaagacttgaaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagtaag 17709952  T
Q  544 cagcggttaggatttttcgaatcccc 569  Q
     ||| ||||||||| |||||||||||    
T  17709953 tagctgttaggattcttcgaatcccc 17709978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 380 - 571
Target Start/End: Complemental strand, 17337209 - 17337007
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aag 476  Q
    ||||||| |||||||||||||||||||||| | || ||||||| ||||||||||||||||||||| ||||||||||      ||||||||||||   |||    
T  17337209 gtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttag----ttgacgatataataaaag 17337114  T
Q  477 at---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 564  Q
    |    |||         ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| | ||| |||| ||||||    
T  17337113 agtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcgaa 17337014  T
Q  565 tccccct 571  Q
    |||||||    
T  17337013 tccccct 17337007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 19882625 - 19882738
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaatt 19882724  T
Q  440 tgcgtaacttattt 453  Q
     |||| ||||||||    
T  19882725 cgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 567
Target Start/End: Original strand, 25097859 - 25098044
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| ||| |||||||  ||| |||| || ||||   || |||||||||| ||   ||||| |||| |||| |    
T  25097859 gtaataaagttagtaagtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttatttttata--gttgacaatattaaagtt 25097956  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 567  Q
    | ||||||||||||||||||| |||||| ||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  25097957 a-gttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttaggattcttcgaatcc 25098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 548
Target Start/End: Complemental strand, 13128972 - 13128768
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| | |||| ||||||||||    
T  13128972 caagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttattttt 13128873  T
Q  456 gtaattttgacgat---ataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt-ggttgcagaaaagta 541  Q
     ||   ||||| ||   ||||||||||           |||||||||||||| |||||| ||||||| |||||| | ||||||| |||||||||||||||    
T  13128872 tta--gttgaccatataataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggttgcagaaaagta 13128775  T
Q  542 agcagcg 548  Q
    |||||||    
T  13128774 agcagcg 13128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 20315001 - 20315098
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| ||||| ||||| | |||||||| ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  20315001 caagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 456
Target Start/End: Complemental strand, 21323989 - 21323873
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||| |  |||||| ||||| |||||||||||||||| |||  ||||||||||||||||||||||||    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 21323890  T
Q  440 tgcgtaacttatttttg 456  Q
     |||| |||||||||||    
T  21323889 cgcgttacttatttttg 21323873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 25121191 - 25121093
Alignment:
Q  477 ataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttca 576  Q
    |||| ||||||||| |||||||||||||||||||||||| ||  ||||| | ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  25121191 atagattgcaatttctatctgtttgcaacagagcaagtt-acccgtttt-gattgcagaaaagtaagcagcggttaggattcttcgaatccccctattca 25121094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 569
Target Start/End: Complemental strand, 12406753 - 12406577
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgt-cgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatt 489  Q
    |||||||| |||||| |  ||| ||||||| | |||||||| |||||||   || |||||||||||||| |||||||||||||||||  || ||| ||||    
T  12406753 taagtagaatatcgtttgcacatggattgttcttttcgtccgaacaattcttgttacttatttttgtaagttttgacgatataaaagtgag-ttg-aatt 12406656  T
Q  490 tttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||| | ||||||||| ||||| | ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  12406655 ttttt-tgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaatcccc 12406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 489 - 568
Target Start/End: Complemental strand, 24639415 - 24639336
Alignment:
Q  489 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| || |||||||    
T  24639415 ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctttgaatccc 24639336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 25094592 - 25094779
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | ||||||||||||| |||| ||| |||||||  ||||||||||||||||   || ||||| ||||||| ||   ||| |||||||| |    
T  25094592 gtaataaagttagtaagtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttacttaattttgtagtta--acggtataaaagtt 25094689  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    || ||||||||||||||||||||||||| ||| | ||||| |  |||||| || ||||||  ||||||||||||||||| || ||||||||    
T  25094690 ag-ttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttaggattcttagaatcccc 25094779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 11490557 - 11490631
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||| |||||||||    
T  11490557 gtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 12578364 - 12578266
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| |  |||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||  ||||||||    
T  12578364 caagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttcttatttt 12578266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 17671985 - 17672101
Alignment:
Q  338 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||||| |||||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| ||| ||||||| |||||||| ||||||    
T  17671985 actgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaa 17672084  T
Q  438 tttgcgtaacttatttt 454  Q
     | |||| |||||||||    
T  17672085 ctcgcgttacttatttt 17672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 14649036 - 14649130
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| || || ||||||||| | || ||||||||||||| |||||    
T  14649036 caatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 14649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 5679204 - 5679304
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||||| ||||| | ||||||||||||| |||||||||||||||| ||| | | | | ||||||||||||||||| |||| ||||||||    
T  5679204 gacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttacttattt 5679303  T
Q  454 t 454  Q
    |    
T  5679304 t 5679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 577
Target Start/End: Complemental strand, 26115865 - 26115772
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    |||||||||||||||||||||||||||| ||||| || |||||| ||||||| ||| || |||||||||||||||| ||| ||||||||| |||||    
T  26115865 ttgcaatttttatctgtttgcaacagagtaagtt-acctgtttt-ggttgcataaatgttagcagcggttaggattcttcaaatccccctattcat 26115772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 40227917 - 40228011
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||||||||| ||| |||||||| | ||||| ||||| ||||| |||||||||||||||||| || |||||||||| || |||||    
T  40227917 caatttttatctgtttgcaacggagtaagtttacctattttttgttgccgaaaaataagcagcggttaggattctt-gaatccccctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 9737623 - 9737514
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgat-----aagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||||||  | ||||||||| ||||| ||||| | |||||||||||||     ||||||||||||||||| ||| ||||||| |||||||| |||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaa 9737524  T
Q  435 caatttgcgt 444  Q
    ||||||||||    
T  9737523 caatttgcgt 9737514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 24639528 - 24639467
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttg 441  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  24639528 gtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg 24639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 25121339 - 25121227
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  |  |||||| | ||||| ||||| | ||||||||||| |||||| ||||||||||| ||| ||||||| |||||||||||||||||    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaatt 25121241  T
Q  440 tgcgtaacttattt 453  Q
     |||| ||||||||    
T  25121240 cgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 14648879 - 14648966
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||| |||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14648879 ctgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 14648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 17672141 - 17672214
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||| ||| |||||||||    
T  17672141 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-gtttggttgcagaaaagtaagaagcagttaggatt 17672214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 439
Target Start/End: Complemental strand, 13992973 - 13992891
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  13992973 aagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 539
Target Start/End: Complemental strand, 19929632 - 19929579
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19929632 caatttttatctgtttgcaacagagcaa-attacatgtttttggttgcagaaaag 19929579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 19929773 - 19929699
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    ||||||||| ||||| ||||| | |||| |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  19929773 caagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtc 19929699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 551
Target Start/End: Complemental strand, 17951256 - 17951189
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 551  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| |||||||||||    
T  17951256 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgcagaaaagcaagcagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 8969821 - 8969722
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||||  ||||| | ||||||||||| ||||||||| | |||||| || | |||||||||||||||||||||||| | || ||||||||    
T  8969821 gacaagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattt 8969723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 15047130 - 15047210
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||| | ||||| ||||| | ||||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||    
T  15047130 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 15107294 - 15107214
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||| | ||||| ||||| | ||||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||    
T  15107294 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 22357492 - 22357405
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||| ||||||||| | |||||||| || |||||||| ||||||||||| ||||| || |||||| |||| |||||||||    
T  22357492 ttgcaatttttatttgtttgcaatatagcaagtt-acttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatccccc 22357405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 454
Target Start/End: Original strand, 9052654 - 9052772
Alignment:
Q  335 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    |||||||||||||||||  | ||||||||| ||||| ||||| | |||||||| || ||||||||||||||||||  ||  |||||| |||||  |||||    
T  9052654 gttactgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaa 9052752  T
Q  435 caatttgcgtaacttatttt 454  Q
    |||||  ||| |||||||||    
T  9052753 caattcacgttacttatttt 9052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 19636660 - 19636601
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  19636660 gtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaatt 19636601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 17951410 - 17951320
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    ||||||||||||  ||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||| |  ||  |||||||||||||    
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtc 17951320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 482 - 548
Target Start/End: Complemental strand, 17955108 - 17955044
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 548  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||||    
T  17955108 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgcagaaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 430
Target Start/End: Complemental strand, 17955262 - 17955172
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    ||||||||||||  ||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||| |  ||  |||||||||||||    
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtc 17955172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 20829836 - 20829739
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | ||||||||||||||| | |||||| ||||| ||| ||||||| ||||||| |||| ||||||| | |||||||||    
T  20829836 caagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattacttatttt 20829739  T

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Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 22176060 - 22175970
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaa 446  Q
    ||||||||| ||||| ||||  | |||||||||||||||||||||||| ||||| | || ||||||| |||  ||||||||||| ||||||    
T  22176060 caagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcgtaa 22175970  T

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Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 19092320 - 19092377
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||||||||||||| ||||||||| ||  ||| |||||||||||||||||||||||    
T  19092320 gtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaa 19092377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 23080326 - 23080439
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||| ||||  || |||||||| ||||  ||||| |  |||||| |||||||||||| ||| ||||  ||| |||||||||||||  ||||||||||    
T  23080326 tgatggttggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatt 23080425  T
Q  440 tgcgtaacttattt 453  Q
    ||||| ||||||||    
T  23080426 tgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 19374909 - 19374814
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||| ||||| ||||  | |||||||| || |||||||||||||||||| || | ||||||||||| |||||||||||||   ||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaatttatataacttattt 19374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 22526390 - 22526462
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||  |||||| || || || ||||||||    
T  22526390 taataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttattt 22526462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 525
Target Start/End: Complemental strand, 9264966 - 9264923
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 525  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  9264966 ttgcaatttttatctgtttgcaacagagaaagtttacgtgtttt 9264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 454
Target Start/End: Original strand, 11933431 - 11933517
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||| ||||| | ||||| ||||||||||| |||||||||  | ||| ||||||||||||||||||||||| | |||| |||||||||    
T  11933431 aatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttatttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 11521264 - 11521218
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  11521264 taataaagtgataagtagagtatcgtatacacatggattgtcgtttc 11521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 10589737 - 10589781
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 425  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||    
T  10589737 gtaataaagtgataagt-gagtgtcgtatcaacagggattgtcgtt 10589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 441
Target Start/End: Complemental strand, 11700683 - 11700583
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||| ||||  ||||||||||| ||||  ||||| | |||||||| |||||| |||||||||||||| |||  ||||||| ||||||  ||||||||    
T  11700683 tgatggttggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca-agattgtcttttcgtttaaacaatt 11700585  T
Q  440 tg 441  Q
    ||    
T  11700584 tg 11700583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 11935237 - 11935282
Alignment:
Q  524 tttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaatcccc 11935282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 542
Target Start/End: Complemental strand, 20829696 - 20829640
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||||||| ||||    
T  20829696 caatttttatctgtttgcgacatagcaag-ttacttgtttttggttgcagaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 22357632 - 22357559
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagag---tatcgtatcaacagggattgtcgtttc 427  Q
    |||||||| ||||| ||||| | |||||||||||||||||| ||   ||||||||| ||| |||||||||||||    
T  22357632 aagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttc 22357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 515
Target Start/End: Complemental strand, 12578223 - 12578193
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtt 515  Q
    |||||||||||||||||||||||||||||||    
T  12578223 caatttttatctgtttgcaacagagcaagtt 12578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 515
Target Start/End: Original strand, 5679344 - 5679377
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtt 515  Q
    |||||||||||||||||||| |||||||||||||    
T  5679344 ttgcaatttttatctgtttgtaacagagcaagtt 5679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 11093947 - 11094036
Alignment:
Q  339 ctgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||||||| | || |||||||  ||||| ||||| | |||||||| ||||| ||||||| || |||| |||| ||||||||||||    
T  11093947 ctgatggtcggatttagataagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttc 11094036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 12318420 - 12318481
Alignment:
Q  342 atggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtat 403  Q
    ||||||||||  | ||||||||| ||||| || || | ||||||||||||||||||||||||    
T  12318420 atggtcggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 19092434 - 19092505
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||||||| |||||||| ||  |||| || |||||||| |||||||||||  |||||||||||    
T  19092434 ttgcaatttttatctgtttacaacagagtaa-attacctg-ttttggttacagaaaagtaaatagcggttagga 19092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 569
Target Start/End: Complemental strand, 21323833 - 21323752
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||| |||||||||||||||| |||| || ||||||||||||||   |||||| |  |||| |||||||||||||||    
T  21323833 caatttttatctatttgcaacagagcaag-ttacctg-ttttggttgcagaattctaagcaac-attagaatttttcgaatcccc 21323752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 340 - 580
Target Start/End: Complemental strand, 17102007 - 17101768
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||||||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||     
T  17102007 tgatggtcggatatggaaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaata 17101908  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
    || || |||||| ||||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  17101907 tgtgttacttatatttgtaagtt-gacggtataaaagataggttccaatttttatctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaag 17101809  T
Q  540 taagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||| ||||||||||  || ||||||| |||| |||||    
T  17101808 taagcagtggttaggattcatcaaatccccatgtttatatt 17101768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 356 - 580
Target Start/End: Complemental strand, 29382459 - 29382224
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  29382459 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttattttt 29382360  T
Q  456 gtaattttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    |||| ||||||||||||||           ||| || ||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||||    
T  29382359 gtaagtttgacgatataaaagttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttggttgcagaaaagtaagc 29382260  T
Q  545 agcggttaggatttttcgaatccccctgttcatatt 580  Q
    || |||||||||| ||| || ||||||||| |||||    
T  29382259 agtggttaggattcttcaaacccccctgtttatatt 29382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 356 - 570
Target Start/End: Complemental strand, 24114380 - 24114157
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||  ||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||||    
T  24114380 caagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttattttt 24114281  T
Q  456 gtaattttgacgatataaaagat-----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    ||||  |||||||||||||||||           ||||||||||||||||||||||||| |||||||||||||| || |||||||  | |||||||||||    
T  24114280 gtaa-gttgacgatataaaagataagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctg-ttttggtatctgaaaagtaagc 24114183  T
Q  545 agcggttaggatttttcgaatccccc 570  Q
    ||||||||||||| ||||||||||||    
T  24114182 agcggttaggattcttcgaatccccc 24114157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 380 - 551
Target Start/End: Original strand, 27659470 - 27659642
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |  | || ||||||||||||||  ||||||||||||||||||    
T  27659470 gtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaa-gttgacgatataaaagata 27659568  T
Q  480 --ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 551  Q
      |||||||||||| |||| ||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  27659569 agggttgcaattttaatctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcggtt 27659642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 356 - 570
Target Start/End: Original strand, 24269599 - 24269822
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||  | | | ||||||||    
T  24269599 caagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttattttt 24269697  T
Q  456 gtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    |||| ||||||| ||||||| ||| |           ||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  24269698 gtaagtttgacggtataaaaaataagagtttgaatagttgcaatctttatctgtttgcaacagagta-gtttacctgtttttggttgcagaaaagtaagc 24269796  T
Q  545 agcggttaggatttttcgaatccccc 570  Q
    ||||||||||||| ||||||||||||    
T  24269797 agcggttaggattcttcgaatccccc 24269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 380 - 568
Target Start/End: Complemental strand, 23893275 - 23893089
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||  ||| |||| |||||||   || |||||||||||||| ||||||| |||||||||||    
T  23893275 gtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaagata 23893176  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
     |||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||  ||  ||||||||| || |||||||    
T  23893175 -gttgcaatttttatctgtttgcaacaaagcaaatttacctg-ttttggttgcagaaaagtaactagtagttaggattctttgaatccc 23893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 569
Target Start/End: Original strand, 16403952 - 16404125
Alignment:
Q  395 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 493  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| |||| ||| ||||||||  || ||||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagttttcacggtataaaagtgag-ttgcaattttta 16404050  T
Q  494 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    | ||||||||||||||| | ||||| | |||| || ||||||||| |||||||||||||||||| |||||||||||    
T  16404051 tttgtttgcaacagagcgaatttacctatttt-ggctgcagaaaaataagcagcggttaggattcttcgaatcccc 16404125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 350 - 571
Target Start/End: Original strand, 25226131 - 25226362
Alignment:
Q  350 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 449  Q
    ||||||||||||||| ||||| ||||  | ||||||||||||||||| |||||||||||  ||||||||| | ||||| |||||||||||||||| || |    
T  25226131 atatgacaagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacat 25226230  T
Q  450 atttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 538  Q
    |||||| ||| ||||| ||||||||||  |||           || |||||||||| ||||||||| |||||||||||||||| | ||||||| | ||||    
T  25226231 atttttataagtttgaagatataaaagtaagggttagaaagtcttccaatttttatatgtttgcaatagagcaagtttacatg-tcttggttgtaaaaaa 25226329  T
Q  539 gtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||| |||  |||||||| || ||||||||||    
T  25226330 gtaagtagcaattaggattgtttgaatccccct 25226362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 19264067 - 19264256
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||  ||||||||||  | | |||||||  |||| || ||  ||||  ||| |||||||||||||| ||||| | |||||||| ||    
T  19264067 gtaataaagtgataagttaagtatcgtattcatatggattgttctttcatcaaattaattctcgttacttatttttgtaagtttgatgttataaaagtta 19264166  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||| ||||||||||| ||||||||||||||||||||  | |||||||||| | ||| |||||||||||| ||| ||||||||||||||    
T  19264167 agttgtaatttttatctttttgcaacagagcaagtttatctatttttggttgaaaaaaggtaagcagcggtaaggctttttcgaatcccc 19264256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 357 - 569
Target Start/End: Complemental strand, 13315089 - 13314866
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||| | ||| ||||| | |||||||||||||||||| ||||||||||| ||| ||||| | ||||||||||||||||| |||| |||||||||      
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttatttta- 13314991  T
Q  457 taattttgacgatataa---aagatag----------gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
    ||| || ||||||||||   ||||||           |||||||||||||| |||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  13314990 taagtt-gacgatataataaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaag 13314892  T
Q  544 cagcggttaggatttttcgaatcccc 569  Q
    || |||||| |||| |||||||||||    
T  13314891 caacggttaagattcttcgaatcccc 13314866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 357 - 557
Target Start/End: Complemental strand, 18448639 - 18448428
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||| ||||| ||||| | |||||||||| |||| ||||| |||||||||| || ||||||||||| ||||||||||||  ||| ||||||||||     
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T
Q  457 taattttgacgatataaaagata---gg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
    |||  ||||||||||||||||||   ||          ||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  18448539 taa-gttgacgatataaaagataaatggttagaaagtcttgcagtttttatctgtttgcaacagagcaag-ttacctgtttttggttgcataaaagtaag 18448442  T
Q  544 cagcggttaggatt 557  Q
    || |||||| ||||    
T  18448441 caacggttatgatt 18448428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 396 - 566
Target Start/End: Original strand, 18569107 - 18569276
Alignment:
Q  396 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatttttat 494  Q
    ||||||||| |||| | |||||||||| |||||||  || ||||   || |||||||||||||| |||||||| ||||||||  || |||| ||||||||    
T  18569107 tagagtatcatatccatagggattgtcctttcgtcttaaaaattcttgttacttatttttgtaagttttgacggtataaaagtgag-ttgctatttttat 18569205  T
Q  495 ctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||    
T  18569206 ctgtttgcaacatagcgagtttacttgtttt-ggttgcagaaaagtaagcagcggttacgattttttgaatc 18569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 489 - 570
Target Start/End: Complemental strand, 24110623 - 24110543
Alignment:
Q  489 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  24110623 ttttatctgtttgcaacagaggaagtttatctgtttt-ggttgcagaaaagtaagcaggggttaggattattcgaatccccc 24110543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 497 - 580
Target Start/End: Complemental strand, 26394644 - 26394562
Alignment:
Q  497 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||||| || |||||    
T  26394644 gtttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaatccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 30806611 - 30806492
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgta-----tcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||||||  | ||||||||  ||||| |||| || ||||||||||||||||||||||||||||     || ||| ||||||||||||| ||||||    
T  30806611 tgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaa 30806512  T
Q  435 caatttgcgtaacttatttt 454  Q
    |||||||||| |||||||||    
T  30806511 caatttgcgttacttatttt 30806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 44010984 - 44010898
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||| |||| |||||| ||||    
T  44010984 ttgcaatttttatatgtttgcaacagaacaagtt-acatgtttttggttgcagaagagtaagtagcggttaagattcttcgaaccccc 44010898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 14075599 - 14075692
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||| ||||||||||| | |||| ||||||||||||||| ||||||||| ||| |||||||||||||  ||||||||| ||||| ||||||||    
T  14075599 tgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 14528132 - 14528248
Alignment:
Q  338 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||| |||||||  | ||||||| | ||||| ||||| | |||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  14528132 actgatagtcggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaa 14528231  T
Q  438 tttgcgtaacttatttt 454  Q
     |  ||| |||||||||    
T  14528232 ctcacgttacttatttt 14528248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 586
Target Start/End: Original strand, 21314761 - 21314865
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatattc 581  Q
    ||||||| |||||||| || ||| ||||||||||| | ||||||| ||| || ||||||||| ||||||||||| | ||||||||||||| || ||||||    
T  21314761 ttgcaatatttatctgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttaggagtattcgaatccccctattgatattc 21314860  T
Q  582 ttcga 586  Q
    |||||    
T  21314861 ttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 25182388 - 25182301
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| || ||| |||||||| | || |||||||||    
T  25182388 ttgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttgcagaaaaggaaacagtggttaggactctttgaatccccc 25182301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 6884946 - 6885056
Alignment:
Q  343 tggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 442  Q
    |||||||||  | ||||||||| ||||| | |||   ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||    
T  6884946 tggtcggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgc 6885044  T
Q  443 gtaacttatttt 454  Q
    |  |||||||||    
T  6885045 gctacttatttt 6885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 24904634 - 24904717
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  24904634 caagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaatt 24904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 2637623 - 2637697
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  2637623 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 438
Target Start/End: Original strand, 5850926 - 5851024
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    ||||||||||||  | |||||||||  |||| ||||| | |||||||||||||||||||||||||||||| |||  ||||||||||||  |||||||||    
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaat 5851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 19786716 - 19786813
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||||||  ||||||| ||| ||||| ||||| | |||||||||||| ||||| |||||| |||| | ||||| |||||||||||||||||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaa 19786813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 14626166 - 14626242
Alignment:
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||| |||||| |  |||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  14626166 gttgcaatttttatgtgtttggattagagcatgtttacctttttttggttgcagaaaagtaagcagcagttaggatt 14626242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 547
Target Start/End: Original strand, 17509271 - 17509447
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||||||||||||||||| |||| ||| |||||||  ||||||||||||||||  | | |||||||||| |||  |||||| |||||||  ||    
T  17509271 gtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataa-gttgacggtataaaaatta 17509369  T
Q  480 gg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagc 547  Q
     |           |||||||||| | |||||||||| ||||||||||||| ||||||| |||||| |||||||||||||    
T  17509370 agggttaaaagacttgcaattttcacctgtttgcaatagagcaagtttacctgttttt-gttgcaaaaaagtaagcagc 17509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 21314648 - 21314723
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||   ||| ||||||||||    
T  21314648 gtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt 21314723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 422
Target Start/End: Original strand, 26008024 - 26008090
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtc 422  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||    
T  26008024 caagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtc 26008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 15238780 - 15238896
Alignment:
Q  336 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 435  Q
    ||||||||||||| ||  | ||||||||  ||||  ||||| | |||| ||| ||||||||||| ||||||||| ||| | |||||||||||||| ||||    
T  15238780 ttactgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaac 15238879  T
Q  436 aatttgcgtaacttatt 452  Q
    |||| |||| |||||||    
T  15238880 aattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 34497126 - 34497198
Alignment:
Q  366 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    ||||| ||||| | ||||||||||||| |||||||||||||||| | || || ||||||||||||||||||||    
T  34497126 aaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaat 34497198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 454
Target Start/End: Complemental strand, 25182543 - 25182428
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||||  |||||||| || ||||  ||||| |  ||||||||||| ||||||||||||||||  ||| |||||||| ||||||| ||||       
T  25182543 ctgatggtcggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgc 25182444  T
Q  439 ttgcgtaacttatttt 454  Q
    |||||| |||||||||    
T  25182443 ttgcgttacttatttt 25182428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 577
Target Start/End: Original strand, 34497255 - 34497348
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    ||||||||||||||| ||||||||| |||| | |||| ||  |||| |||||||||||||||||||||||||||||  | |||||||||| |||||    
T  34497255 ttgcaatttttatctttttgcaacatagcatg-ttacctg-gtttgcttgcagaaaagtaagcagcggttaggattccttgaatccccctattcat 34497348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 7983720 - 7983807
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||||| ||| ||||||||  |  ||||  ||||||||||||||||||| ||| ||||||| || ||||||||||    
T  7983720 ttgcaatttttatctgtttgcgacatagcaagttgcctggttt--ggttgcagaaaagtaagcaacgggtaggattctttgaatccccct 7983807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 13697994 - 13698080
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||| |||||||||||||||| |||| ||  ||||||||||||||||||||||| | ||| || | || ||||||||||    
T  13697994 ttgcaatttttatctctttgcaacagagcaag-ttacctg--tttggttgcagaaaagtaagcagtgattatgactctttgaatccccct 13698080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 454
Target Start/End: Original strand, 13697893 - 13697954
Alignment:
Q  393 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||  ||||| |||||||||    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttatttt 13697954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 551
Target Start/End: Original strand, 14528288 - 14528355
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 551  Q
    |||||||||||| |||||||||||| |||||||| || || ||| |||||||||||||||||||||||||    
T  14528288 ttgcaatttttagctgtttgcaacaaagcaagtt-acctggttt-ggttgcagaaaagtaagcagcggtt 14528355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 19786874 - 19786926
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  19786874 aatttttatctgtttgcaacagagcaag-ttacatgtttttgattgtagaaaag 19786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 44011116 - 44011048
Alignment:
Q  361 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    |||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtc 44011048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 17976599 - 17976694
Alignment:
Q  335 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    |||| |||| |||||||  | ||||||| | ||||| ||||  | |||||||||||||||||||||||||||||| |||  |||| ||||||||||    
T  17976599 gttattgattgtcggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtc 17976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcg 423  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||  ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 577
Target Start/End: Original strand, 9642018 - 9642110
Alignment:
Q  483 tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    ||||||||||||||| ||||||||||||||  |||| || |||| |||||||||| || |||||||||||  ||| || |||||||||| |||||    
T  9642018 tgcaatttttatctgcttgcaacagagcaa-attacttg-ttttagttgcagaaatgttagcagcggttaaaattctttgaatccccctattcat 9642110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 546
Target Start/End: Original strand, 24644984 - 24645042
Alignment:
Q  488 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcag 546  Q
    ||||||||| ||||||||| | |||  |||| |||||||||||||||||||||||||||    
T  24644984 tttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaagtaagcag 24645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 30122114 - 30122046
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 552  Q
    |||||||||||||||||||| ||||||| ||||| || | |||| |||||||||||||||||||| |||||    
T  30122114 ttgcaatttttatctgtttgtaacagagtaagtt-acctatttt-ggttgcagaaaagtaagcagtggtta 30122046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 24110753 - 24110672
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||  ||||| ||||| | |||||||| ||||||||||||||||||||| |||  |||| || ||| ||||||||||    
T  24110753 caagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaacaa 24110672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 30122228 - 30122156
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||||||||||||| |||| ||| |||||||| ||| |||||||||||| || | ||||||||    
T  30122228 gtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 542
Target Start/End: Original strand, 6885096 - 6885155
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||||||||||||||||||| || |||| ||| |||| |||||||||||||||||| ||||    
T  6885096 ttgcaatttttatctgtttgtaatagagtaag-ttacctgtttttggttgcagaaatgtaa 6885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 31288360 - 31288429
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    |||||||| ||||| ||||| | ||||||||||| |||||| ||||||||||| | |||||||||| ||||    
T  31288360 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttc 31288429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 5053019 - 5052966
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 409  Q
    ||||||||| ||||| |||||  |||||||||||| |||||||||||| |||||    
T  5053019 caagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatc 5052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 7e-63; HSPs: 102)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 367 - 569
Target Start/End: Original strand, 11803092 - 11803293
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||    
T  11803092 aatctttaacaaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttgtaagtttgac 11803191  T
Q  467 gatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
      |||||||| ||||||| ||||||||  ||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||| ||||||||    
T  11803192 agtataaaagttaggttgaaatttttagttgtttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatc 11803290  T
Q  567 ccc 569  Q
    |||    
T  11803291 ccc 11803293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 16059096 - 16058907
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| ||| |||||||| |||||||||||||||||  || |||||||||||||| ||||||| ||||||||      
T  16059096 gtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttgtaagtttgacggtataaaagtg 16058997  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    || || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  16058996 agttt-caatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatcccc 16058907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 380 - 571
Target Start/End: Complemental strand, 1848301 - 1848100
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaa----- 474  Q
    |||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||         
T  1848301 gtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataaaaatta 1848202  T
Q  475 ------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
          ||| || |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||||||| |    
T  1848201 agggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcggttatgattcttcgaatctc 1848103  T
Q  569 cct 571  Q
    |||    
T  1848102 cct 1848100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 344 - 567
Target Start/End: Original strand, 13418523 - 13418744
Alignment:
Q  344 ggtcggatatgacaagtgtacgaaatcttttactaggtaataaa-gtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 442  Q
    ||||||||||| ||||||||| || || || || | |||||||| |||||||||||||||||||||| | |||||||||| ||||||||||||| ||  |    
T  13418523 ggtcggatatggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtc 13418621  T
Q  443 gtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    || |||||||||| ||| || |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||    
T  13418622 gttacttatttttttaagtt-gacggtataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttgattgcagcaaagtaa 13418719  T
Q  543 gcagcggttaggatttttcgaatcc 567  Q
    ||||||||||||||| || ||||||    
T  13418720 gcagcggttaggattctttgaatcc 13418744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 339 - 557
Target Start/End: Complemental strand, 8979121 - 8978892
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    ||||||||||||||||  |||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  8979121 ctgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaat 8979022  T
Q  439 ttgcgtaacttatttttgtaattttgacgatataaaagat---agg--------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 527  Q
    | || | ||||||||| |||| |||||| |||||||||||   |||        |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  8979021 tcgcattacttattttggtaagtttgacaatataaaagataaaagggttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttg 8978922  T
Q  528 gttgcagaaaagtaagcagcggttaggatt 557  Q
    ||||||||||| |||||||| |||||||||    
T  8978921 gttgcagaaaaataagcagcagttaggatt 8978892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 372 - 566
Target Start/End: Complemental strand, 39273257 - 39273053
Alignment:
Q  372 tttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatat 471  Q
    ||||||| |||||||||||||||||||||||||||||  | | |||||||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  39273257 tttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgatat 39273158  T
Q  472 aaaagat----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttc 561  Q
    ||||| |          | ||||||| ||| |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||    
T  39273157 aaaagttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggatccttc 39273058  T
Q  562 gaatc 566  Q
    |||||    
T  39273057 gaatc 39273053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 3329732 - 3329543
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacg-ata-taaaaga 477  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||| ||| | |||||    
T  3329732 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtataatgaaaga 3329633  T
Q  478 tagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    || |          ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3329632 taagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggttgcagaaaagtaagcagcggttaggatt 3329543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 354 - 569
Target Start/End: Original strand, 6042460 - 6042675
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||  ||||| ||||| | |||||||| || |||||||||||||||||| |||| | |||||||||||| |||||||||||||| ||||||||    
T  6042460 gacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttattt 6042558  T
Q  454 ttgtaattttgacgatataa---aagatag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 548  Q
    ||   | ||||||| |||||   |||||||  |||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||| |||||||||    
T  6042559 tt---agtttgacggtataataaaagatagatgttgcaatttttatatgtttgcaacagag-aagtttacctttttttggttgcagaaaaataagcagcg 6042654  T
Q  549 gttaggatttttcgaatcccc 569  Q
    ||||||||| || ||||||||    
T  6042655 gttaggattctttgaatcccc 6042675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 381 - 554
Target Start/End: Original strand, 17077154 - 17077325
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatag 480  Q
    ||||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||||||   || ||||||||||||||  |||||| |||||||| | |    
T  17077154 taataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttatttttgtaa-gttgacggtataaaagttgg 17077252  T
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
    |||||||||||||||||||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||    
T  17077253 gttgcaatttttatctgtttgcaatagagtaagtttacctg-ttttgtttgcagaaaagtaagcagcggttagg 17077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 356 - 580
Target Start/End: Original strand, 2563819 - 2564054
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||| |    
T  2563819 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttatttct 2563917  T
Q  456 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||| ||  |||||||||   |||||| |          ||| ||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||    
T  2563918 gtaagttc-acgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaa 2564016  T
Q  543 gcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    | ||||||||||||  |||||||||||||||| |||||    
T  2564017 gtagcggttaggatccttcgaatccccctgtttatatt 2564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 4449005 - 4449192
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| ||||| ||||| ||||||| |||| ||| ||||||||||||   || |||||||||||||| ||||||| |||||||| ||    
T  4449005 gtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 4449103  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||| |||||||||||||||||| |||||| | ||||| |  ||||||||||| |||||||| |||||||||| ||| || ||||||||    
T  4449104 ggttgaaatttttatctgtttgcagcagagcgaatttacct-attttggttgcaaaaaagtaaacagcggttagaattctttgaatcccc 4449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 341 - 476
Target Start/End: Complemental strand, 13759973 - 13759838
Alignment:
Q  341 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaattt 440  Q
    ||||||||||||||  |||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||     
T  13759973 gatggtcggatatggtaagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttc 13759874  T
Q  441 gcgtaacttatttttgtaattttgacgatataaaag 476  Q
    |||| |||||||||||||| ||||||||||||||||    
T  13759873 gcgttacttatttttgtaagtttgacgatataaaag 13759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 13277528 - 13277716
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||| |||||||| |||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| ||| ||| |||||||| ||    
T  13277528 gtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagtttaacggtataaaagtta 13277627  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||| | ||||| | || || || ||||||||| ||||||||||| |||| |||||||| || ||||||||    
T  13277628 ggttgcaatttttatctgtttgctatagagcgaattgacctg-ttttggttgtagaaaagtaagtagcgattaggattctttgaatcccc 13277716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 5108706 - 5108801
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||| || |||||    
T  5108706 caatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagcagcggttaggattctttgaatccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 350 - 568
Target Start/End: Original strand, 20582254 - 20582479
Alignment:
Q  350 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 449  Q
    ||||| |||| |||| ||||| ||||| |  ||||||||||||||||   |||||||||| |||||||| |||||||| |||| ||||||  ||| ||||    
T  20582254 atatggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttactt 20582350  T
Q  450 atttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 537  Q
    | |||| ||| || ||||||||||||| || |            ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  20582351 aattttataagtt-gacgatataaaaggtaagggttaaaaagatttgcaatttttatctatttgcaacagagcaagtttacctgtttt-ggttgcagaaa 20582448  T
Q  538 agtaagcagcggttaggatttttcgaatccc 568  Q
    |||||||||| ||||||||| ||||||||||    
T  20582449 agtaagcagcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 356 - 569
Target Start/End: Complemental strand, 8054156 - 8053937
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | ||||||||||||||| |||||||||||||| ||| | |||||||||   |||||||||||  | | ||||||||||    
T  8054156 caagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattttt 8054060  T
Q  456 gtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    ||||  |||||||||||||||||| |           ||| || |||||||| ||||||| | ||||||||||| || ||||||||||||||||||||||    
T  8054059 gtaa-gttgacgatataaaagataagagttaaaagacttgtaaattttatctatttgcaatatagcaagtttacctg-ttttggttgcagaaaagtaagc 8053962  T
Q  545 agcggttaggatttttcgaatcccc 569  Q
    ||| ||||||||| || ||||||||    
T  8053961 agcagttaggattctttgaatcccc 8053937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 8054587 - 8054465
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||   || ||||||||||    
T  8054587 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattttt 8054488  T
Q  456 gtaattttgacgatataaaagata 479  Q
    ||||  ||||||||||||||||||    
T  8054487 gtaa-gttgacgatataaaagata 8054465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 11221262 - 11221163
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||| ||||||||||    
T  11221262 caagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 356 - 573
Target Start/End: Complemental strand, 18369078 - 18368849
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||  ||||| | |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||   || ||||||||||    
T  18369078 caagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattttt 18368979  T
Q  456 gtaattttgac-gatataaaagata---ggt----------tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagta 541  Q
     |||  |||||  ||||||||||||   |||          |||||||||||||||||||||||| |||||| |||| || ||||||||| |||||||||    
T  18368978 ataa-gttgacaaatataaaagataaagggttagaaagtcgtgcaatttttatctgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaagta 18368881  T
Q  542 agcagcggttaggatttttcgaatccccctgt 573  Q
    || | |||||||||||  | ||||||||||||    
T  18368880 agaaacggttaggattccttgaatccccctgt 18368849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 31492915 - 31493029
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||  ||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  31492915 tgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatt 31493014  T
Q  440 tgcgtaacttatttt 454  Q
    ||  | |||||||||    
T  31493015 tgttttacttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 9864444 - 9864327
Alignment:
Q  336 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 435  Q
    ||||| ||||||||||  | ||||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||    
T  9864444 ttactcatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaac 9864345  T
Q  436 aatttgcgtaacttattt 453  Q
    ||||||||| ||||||||    
T  9864344 aatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 17191276 - 17191100
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| | |||| ||||| |||| ||| ||| |||  ||| || ||||||| ||| ||||| | |||||||| |    
T  17191276 gtaataaagttagtaagtagagtatcgtatccataggggttgtcctttcatccgaacgattctcgttacgtatttttttaagtttgatggtataaaag-t 17191178  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    || ||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| ||| || | ||||||||    
T  17191177 ag-ttgcaatttttatctgtttccaacagagcgattttacctgtttttggttgcagaaaagaaagtagtgattaggatt 17191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 10587122 - 10587041
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  10587122 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaa 10587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 568
Target Start/End: Complemental strand, 13289482 - 13289294
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||| | ||| ||||| ||| |||||||| |||| ||| |||||||    | | |||||||||||| ||||||| |||||||||     
T  13289482 gtaataaagttagtaagtataatattgtatccacatggattgtcctttcctccgaacaattctaattaattatttttgtaagtttgacggtataaaagaa 13289383  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    || ||||||||||| ||||||||||| || || | ||||| ||||||||||||||||||| |||  ||||||||| ||| ||||||||||    
T  13289382 ag-ttgcaatttttttctgtttgcaatagtgcgaatttacctgtttttggttgcagaaaattaataagcggttagaattcttcgaatccc 13289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 568
Target Start/End: Original strand, 4785985 - 4786064
Alignment:
Q  488 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    ||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4785985 tttttatctatttgcaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaatccc 4786064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 9131049 - 9131136
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  9131049 ttgcaatttttatttgtttgcaatagagcaagttaac-tgtttttggttgcaaaaaagtaagctgcggttaggattcttcgaatccccc 9131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 482 - 565
Target Start/End: Original strand, 7397280 - 7397362
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 565  Q
    ||||||||||||||||||||||||| | ||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  7397280 ttgcaatttttatctgtttgcaacaaaacaagttatc-tgtttttggttgcagaaaagtaagcagcggttaggattcttcgaat 7397362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 9731725 - 9731626
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||  | ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  9731725 caagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttattttt 9731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 566
Target Start/End: Original strand, 16365690 - 16365927
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||| |||||||  || |||||||| ||||| ||||| | |||||||||| | ||||||||||||||||| ||| |||||||||||| || |||||||||    
T  16365690 tgatagtcggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaatt 16365789  T
Q  440 tgcgtaacttatttttgtaattttgacgat---ataaaaga---------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgttt 524  Q
     |||| ||||||||||   |  ||||||||   ||||||||         |||    || ||||||| |||| |||||| | ||||||| ||||||||||    
T  16365790 cgcgttacttattttt---aagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaag-ttacatgttt 16365885  T
Q  525 ttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  16365886 ttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16365927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 18662579 - 18662666
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||| |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| | |||||||||||||    
T  18662579 ttgcaatttttatttgtttgcaacagagcaagtt-acctgtttt-ggttgcagaaatgtaagcagcggttaggactcttcgaatccccct 18662666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 7318258 - 7318354
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    ||||||||||||  | ||||||||| | ||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaaca 7318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 543
Target Start/End: Complemental strand, 7492337 - 7492163
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaag 476  Q
    |||||||| ||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||| | ||||||||||   ||||||| |||   |||||||    
T  7492337 gtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttattttt---attttgatgatataataaaag 7492241  T
Q  477 a---------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
    |         |||    |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7492240 agttaagggttagagatttgcaatttttaactgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaag 7492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 8877559 - 8877646
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa-agtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||| ||| |||||||||||||||||||| || ||||||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcaaaaatagtaagcagcggttaggattctttgaatcccc 8877646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 16306677 - 16306792
Alignment:
Q  338 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||||||||  ||||||||||  ||||| ||||  | |||||||||||||||||||||||||||||| ||| ||||| || |||| || ||||||    
T  16306677 actgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaa 16306776  T
Q  438 tttgcgtaacttattt 453  Q
    ||||| | ||||||||    
T  16306777 tttgcattacttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 487 - 570
Target Start/End: Complemental strand, 17153109 - 17153027
Alignment:
Q  487 atttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| || | || |||||||||    
T  17153109 atttttatctgtttgcaacaaagcaagtt-acctgtttttggttgcagaaaagtaagcagcggttatgactctttgaatccccc 17153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 23100050 - 23099967
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  23100050 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 454
Target Start/End: Original strand, 3734598 - 3734695
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||| |||| |||||| | |||||||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||  ||| |||||||||    
T  3734598 aagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttatttt 3734695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 18495358 - 18495471
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||  ||||||| |||||||||||||||||| ||||  ||||| |  ||||||||||||||||| ||||||||    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatt 18495457  T
Q  440 tgcgtaacttattt 453  Q
    || || ||||||||    
T  18495458 tgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 18662470 - 18662539
Alignment:
Q  384 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  ||| ||||||||    
T  18662470 taaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 8313488 - 8313412
Alignment:
Q  361 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||| ||||| ||||| | |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaa 8313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 5108567 - 5108649
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5108567 caagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 5108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 10586984 - 10586898
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| ||||| || | || ||||||||    
T  10586984 ttgcaatttttatctgtttgcaacagagcaag-atacatgtttctggttgcaaaaaagtaagcagtggttaagactctttgaatcccc 10586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 16297794 - 16297724
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 553  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||    
T  16297794 ttgcaatttttatatgtttgcaacagagtaagtt-acctatttttggttgcagaaaagtaagcagcggttag 16297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 454
Target Start/End: Complemental strand, 17153273 - 17153154
Alignment:
Q  335 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    |||||||||||||||||  || |||||||  ||||  ||||| | |||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||    
T  17153273 gttactgatggtcggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaa 17153174  T
Q  435 caatttgcgtaacttatttt 454  Q
    ||  | |||| |||||||||    
T  17153173 cagctcgcgttacttatttt 17153154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 1584530 - 1584642
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| || || ||||| | ||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||| |    
T  1584530 tgatggtcggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaat 1584627  T
Q  440 tgcgtaacttatttt 454  Q
     |||| |||||||||    
T  1584628 cgcgttacttatttt 1584642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 339 - 453
Target Start/End: Original strand, 5530005 - 5530119
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||||  | || |||||| ||||  ||||| | |||||||| ||||||||| || |||||||| |||| |||| ||||||||||||||||||    
T  5530005 ctgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaat 5530104  T
Q  439 ttgcgtaacttattt 453  Q
    ||| || ||||||||    
T  5530105 ttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 17203049 - 17203124
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||  |||| |||||||||||    
T  17203049 gtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttttg 17203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 4785861 - 4785936
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4785861 gtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 4818861 - 4818936
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4818861 gtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 9574408 - 9574487
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 435  Q
    ||||||||| ||||| ||||| | | |||||||||||||||||||||||||||| |||| |||||| |||||||| ||||    
T  9574408 caagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaac 9574487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 19153434 - 19153522
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 570  Q
    ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||||||||| || |||||  |||||| ||||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-catcggttagaggattcttcgaatccccc 19153522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 20752833 - 20752921
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 570  Q
    ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||||||||| || |||||  |||||| ||||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-catcggttagaggattcttcgaatccccc 20752921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 7318412 - 7318501
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga-tttttcgaatccccct 571  Q
    |||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| || || || |||||| | ||| ||||||||||    
T  7318412 ttgcaatttttatctgtttgcaacagagcaag-ttacttctttttggttgcagaaaaggaaacaacgattaggactcttttgaatccccct 7318501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 568
Target Start/End: Complemental strand, 9731587 - 9731502
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    ||||||||||||||| | || |||| |||||||| || |||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  9731587 ttgcaatttttatctatgtgtaacatagcaagtt-acctgtttttggttgcataaaagtaagcagcggttagggttgatcgaatccc 9731502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 9916550 - 9916664
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||| | | ||||| ||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| ||||||| |||||  |||||||||    
T  9916550 tgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaat 9916649  T
Q  439 ttgcgtaacttattt 453  Q
     || || ||||||||    
T  9916650 atgtgttacttattt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 9924462 - 9924576
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||| | | ||||| ||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| ||||||| |||||  |||||||||    
T  9924462 tgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaat 9924561  T
Q  439 ttgcgtaacttattt 453  Q
     || || ||||||||    
T  9924562 atgtgttacttattt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 3734735 - 3734806
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    |||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||  ||||||||    
T  3734735 ttgcaaattttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcaatggttagga 3734806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 4579099 - 4579195
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||| | ||||| ||||||| ||||||| |||||||||||||||||||||| | || ||||||| ||| |||||||||||| | || ||||||||    
T  4579099 caagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 9500445 - 9500542
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| ||||| ||||| | ||||||| ||||| | |||||||||||||| ||| ||||||| |||||||| |||||||| || | ||||||||    
T  9500445 caagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 571
Target Start/End: Original strand, 17829712 - 17829795
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||||||| |||||| || |||||| ||||| |||||| ||||||| ||||| |||| |||||||||||||    
T  17829712 aatttttatctgtttgcaacagaacaagttaac-tgtttt-ggttggagaaaattaagcagtggttaagattcttcgaatccccct 17829795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 18467476 - 18467549
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||||||||| |||||||||  || ||||||||    
T  18467476 gtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 18466031 - 18466103
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||||||||||| |||||| | ||||||| |||||||  |||||||||||| || ||||||||    
T  18466031 taataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 555
Target Start/End: Complemental strand, 22067300 - 22067128
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt-gtaattttgacgatataaaaga 477  Q
    |||||||||| | ||||||||||||| |||| | |||||||||| |||||||| | |||||   || | || ||||| |||| ||| ||||||||||||     
T  22067300 gtaataaagttagtaagtagagtatcatatccatagggattgtcctttcgtccgatcaattctagttagttttttttggtaagtttaacgatataaaagt 22067201  T
Q  478 taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||    ||||||||||| ||| ||||||| ||  | ||||| || ||||||||||||||||||||||| |||||||||    
T  22067200 ta----gcaatttttatatgtctgcaacaaagagaatttacctg-ttttggttgcagaaaagtaagcaacggttagga 22067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 10584586 - 10584487
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||||| ||||  | |||||||||||||||| | ||||||||||| ||| ||||||||||||| |  |||||||| | || ||||||||    
T  10584586 gacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 427
Target Start/End: Original strand, 10937603 - 10937674
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||  ||||| ||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  10937603 caagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 10937674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 16297918 - 16297835
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||  ||||| | ||||||| |||||||||||| ||||||||  ||| |||||||| ||||||||||||||||    
T  16297918 caagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaatt 16297835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 1587666 - 1587780
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||| ||||| ||||| ||||||| ||| ||||||||||| ||||||||| |||| |||  ||| || ||||| |||||||||||    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaatt 1587765  T
Q  440 tgcgtaacttatttt 454  Q
     |||| || ||||||    
T  1587766 cgcgttacctatttt 1587780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 2350845 - 2350767
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||| ||||| ||||| | |||||||| || |||||||| ||||||||| ||| |||||||||||| |||||||    
T  2350845 caagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaa 2350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 18449226 - 18449340
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||| | | ||||||||  ||||  ||||| | |||||||||||| ||||| | ||||||||| | |||||||||||||||  |||||||||    
T  18449226 tgatggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaat 18449325  T
Q  439 ttgcgtaacttattt 453  Q
    | |||| ||||||||    
T  18449326 tggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 571
Target Start/End: Complemental strand, 8313352 - 8313265
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||| |  |||||| | || ||||||||||    
T  8313352 ttgcaatttttatctgttttcaacagagcaag-ttacct-attttggttgcagaaaagtaagcaacatttaggactcttggaatccccct 8313265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 571
Target Start/End: Complemental strand, 14195932 - 14195845
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    |||||||||||||||||||||||||||||||| |||  || ||||| ||||||||| ||||||| |  ||| |||| |||||||||||||    
T  14195932 ttgcaatttttatctgtttgcaacagagcaag-ttatctg-ttttgattgcagaaatgtaagcaacaattaagattcttcgaatccccct 14195845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 437
Target Start/End: Complemental strand, 14755244 - 14755147
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||||||  ||||||||||| ||||| ||||  | ||| |||||||| |||||||||||| |||| ||| | ||||| |||||||| ||||||    
T  14755244 tgatggtcggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaa 14755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 453
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  384 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||| ||||||| |||  || ||||||||||||||||||||||||| || | ||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 564
Target Start/End: Original strand, 31493066 - 31493145
Alignment:
Q  483 tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 564  Q
    |||||||||||||||||||||||||||  || |||| || ||||||||| ||||| ||||||| ||||||||||| ||||||    
T  31493066 tgcaatttttatctgtttgcaacagagtcag-ttacttg-ttttggttgtagaaatgtaagcaacggttaggattcttcgaa 31493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 568
Target Start/End: Original strand, 4818995 - 4819065
Alignment:
Q  499 ttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca--gcggttaggatttttcgaatccc 568  Q
    |||||| |||||||||| || | ||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  4818995 ttgcaatagagcaagtt-acctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 4819065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 4986554 - 4986630
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    ||||||||||| ||||| ||||| | ||||||||||| | |||||||||| ||| | ||| ||||||||||||||||    
T  4986554 gacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtc 4986630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 4990652 - 4990728
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 430  Q
    ||||||||||| ||||| ||||| | ||||||||||| | |||||||||| ||| | ||| ||||||||||||||||    
T  4990652 gacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtc 4990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 455
Target Start/End: Original strand, 12329666 - 12329782
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||||  | ||| ||||| ||||| ||||| | |||| ||| |||||| |||||||| ||||| ||| |||||||||||| | ||||| |||    
T  12329666 ctgatggtcggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataat 12329765  T
Q  439 ttgcgtaacttattttt 455  Q
      |||| ||||||||||    
T  12329766 ccgcgttacttattttt 12329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 21230338 - 21230410
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||| ||||||||||||||||||||  | ||||||| |||||||||| || ||||||| || ||||||||    
T  21230338 taataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttacttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 3191133 - 3191074
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||||||| ||||| |||||  |||| | |||||||||||||||||||||||||||    
T  3191133 gtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaatt 3191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 564
Target Start/End: Original strand, 6006084 - 6006157
Alignment:
Q  489 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 564  Q
    ||||||||||||||||||||| ||||| || |||||| ||| ||||||||||||| |||||||| |||| ||||||    
T  6006084 ttttatctgtttgcaacagagtaagtt-acctgtttt-ggtggcagaaaagtaagtagcggttaagattgttcgaa 6006157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 8293997 - 8293928
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||| ||  |||| ||||||||||    
T  8293997 aatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgttcgcagtggttaggatt 8293928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 537
Target Start/End: Original strand, 10648717 - 10648770
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 537  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  10648717 ttgcaatttttatctgtttgcaacaaagcaag-ttacatg-ttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 12181633 - 12181708
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgt-ccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||| |||||||||| |||||| ||| | ||||||||||||| |||||||||| | || |||||||||    
T  12181633 gtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttacttatttt 12181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 15303720 - 15303650
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 425  Q
    ||||||||||| ||||| ||||| ||||||||||||| |||||| ||||||||||| ||| | |||||||||    
T  15303720 gacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatctacacgaattgtcgtt 15303650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 356 - 427
Target Start/End: Original strand, 23093311 - 23093381
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||||||||| ||||| ||  |||||||||||||    
T  23093311 caagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgtttc 23093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 568
Target Start/End: Original strand, 140255 - 140339
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    |||| ||||||||||||||||||||||||||| |||| || |||| |||||||||| || || |||||| |||||| || |||||||    
T  140255 ttgccatttttatctgtttgcaacagagcaag-ttacctg-ttttagttgcagaaatgttagtagcggtcaggattctttgaatccc 140339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 549
Target Start/End: Original strand, 1587821 - 1587884
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcgg 549  Q
    ||||||||||||| ||||||||||||||||||||  |    | |||||||||||||||||||||||||    
T  1587821 ttgcaatttttatttgtttgcaacagagcaagttacc----tcttggttgcagaaaagtaagcagcgg 1587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 6013594 - 6013692
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||  | ||| | |||||||||||||||||||||||| ||| ||||| || |||  ||||||||||| || | |||||||||    
T  6013594 caagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttacttatttt 6013692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 15869596 - 15869694
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||  ||||| ||||| | ||||||||||||||||||||||||||||||  || ||||| | |||| ||| ||| | | ||||| |||||||||    
T  15869596 caagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttacttatttt 15869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 21912553 - 21912507
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||    
T  21912553 taataaagtgataagttgagtatcgtatctacggggattgtcgtttc 21912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 5797496 - 5797609
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||  |||||  |||| | |||||||||| ||||||||||||||||||| ||| | ||||||   ||  ||||||||||    
T  5797496 tgatggtcggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtcaaatcaaccaaacaatt 5797595  T
Q  440 tgcgtaacttattt 453  Q
    || || ||||||||    
T  5797596 tgtgttacttattt 5797609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 570
Target Start/End: Original strand, 15869740 - 15869820
Alignment:
Q  489 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||| |||  ||||| || |||||||||||||| |||||||| || ||||||||| | || |||||||||    
T  15869740 ttttatctgtttgcaatagaaaaagtt-acctgtttttggttgcataaaagtaaacaacggttaggactctttgaatccccc 15869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 409  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 454
Target Start/End: Original strand, 10648589 - 10648677
Alignment:
Q  366 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||| ||||| | ||||||||||||||| ||||||||| |||   || ||||||||||||| || |||||||| | || |||||||||    
T  10648589 aaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 8877446 - 8877505
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||| |||||||||||||||||||||| ||| |||||| | ||| ||| ||||||||    
T  8877446 gtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaatt 8877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 425
Target Start/End: Original strand, 20174571 - 20174641
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 425  Q
    ||||||| ||| ||||| ||||||||||||||||||| ||| |||||||||| || |||| ||||| |||||    
T  20174571 gacaagtataccaaatcgtttactaggtaataaagtg-taactagagtatcgcattaacatggattttcgtt 20174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 6013739 - 6013800
Alignment:
Q  488 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 552  Q
    ||||||| ||||||||||| ||||| |||||||||||  |||||||||||||| |||| ||||||    
T  6013739 tttttatttgtttgcaacaaagcaa-tttacatgttt--ggttgcagaaaagtgagcaacggtta 6013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 426
Target Start/End: Original strand, 7397198 - 7397266
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgttt 426  Q
    |||||||| ||| | ||||| | ||||||||||| ||| |||||||||||||| ||| ||||||||||||    
T  7397198 aagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 14196070 - 14195974
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||| ||||| ||||  |  |||||||||| |||||| |||| |||||| ||| | ||| | ||||||||||||||||| |||| ||||||||    
T  14196070 caagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttacttattt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 454
Target Start/End: Original strand, 1872796 - 1872884
Alignment:
Q  366 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||| || |||| |||||| | ||||||||||||||||||||| |||    |||||||||| | ||||||||| | || |||||||||    
T  1872796 aaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttacttatttt 1872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 6005878 - 6005934
Alignment:
Q  397 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||| ||||| ||| |||||||||||| ||||||||||||  ||| ||||||||    
T  6005878 agagtattgtatccacatggattgtcgtttggtccaaacaattcacgttacttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 1e-55; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 340 - 580
Target Start/End: Complemental strand, 23844579 - 23844327
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  23844579 tgatggtcggatatgataagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaact 23844480  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 526  Q
     |||| ||||||||||||||  |||||||||||||||||             | |||||||||||||||||||||||| ||| ||||||||| || ||||    
T  23844479 cgcgttacttatttttgtaa-gttgacgatataaaagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-tttt 23844382  T
Q  527 ggttgcagaaaagtaagcagcggttaggatttttcgaatccc-cctgttcatatt 580  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  23844381 ggttgcataaaagtaagcagcggttaggatttttcgaatccctcctgtttatatt 23844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 350 - 569
Target Start/End: Original strand, 25781790 - 25782002
Alignment:
Q  350 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 449  Q
    ||||||||||||||| ||||| ||||||  |||||||| |||||| |||| ||||||||     || |||||||||||||||||||||||  ||| ||||    
T  25781790 atatgacaagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat-----ggaattgtcgtttcgtccaaacaattcacgttactt 25781884  T
Q  450 atttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcgg 549  Q
    |||||||||| || || | |||||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||  |    
T  25781885 atttttgtaagtt-gatggtataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcagaaaagtaaacagtag 25781982  T
Q  550 ttaggatttttcgaatcccc 569  Q
    |||||||| |||||||||||    
T  25781983 ttaggattcttcgaatcccc 25782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 356 - 567
Target Start/End: Complemental strand, 27737787 - 27737565
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||||| || | ||| ||||||| ||||||||||||||||| |||| ||||||||||    
T  27737787 caagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttattttt 27737688  T
Q  456 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    |||| || ||||||| ||   |||||| |          ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  27737687 gtaagtt-gacgataaaatgaaagataagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgttttt-gttgcaaaaaagtaa 27737590  T
Q  543 gcagcggttaggatttttcgaatcc 567  Q
    ||||||||||||||| |||||||||    
T  27737589 gcagcggttaggattcttcgaatcc 27737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 24657529 - 24657343
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||| |||||||| |||||||||||| |||||||||||  |||||||| |||||||   || |||||||||||||| ||||||| ||||||   ||    
T  24657529 gtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaa--gta 24657432  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     |||| ||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  24657431 agttgaaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcagaaaagtaagcagcggttagaattcttcgaatcccc 24657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 360 - 566
Target Start/End: Original strand, 5624645 - 5624862
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtat-caacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgta 458  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||| ||| ||| || ||||||||||| || |||||||||||||| |||||||||||||    
T  5624645 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgta 5624744  T
Q  459 attttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagc 547  Q
    | |||||||||| |||           ||| ||||||||||||||||||||||| || ||||| |||||||  | |||||||||||||||||||||||||    
T  5624745 agtttgacgatagaaaagttaagggttagaaaggttgcaatttttatctgtttgtaatagagc-agtttaccggcttttggttgcagaaaagtaagcagc 5624843  T
Q  548 ggttaggatttttcgaatc 566  Q
    |||||||||| ||||||||    
T  5624844 ggttaggattcttcgaatc 5624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 391 - 569
Target Start/End: Original strand, 11135943 - 11136122
Alignment:
Q  391 ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattt 490  Q
    ||||||||||||||||||| |||| ||||||| |||||||  || ||||   || | |||||||||||| ||||||| |||||||| |||||||||||||    
T  11135943 ataagtagagtatcgtatccacagagattgtcctttcgtctgaataattattgttaattatttttgtaagtttgacggtataaaagttaggttgcaattt 11136042  T
Q  491 ttatctgtttgcaacagagcaagtttacatgtttttggttgc-agaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||||| |  |||| ||||||||||||| | ||||||||| ||||||||||||| |||||||||||    
T  11136043 ttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaaagtaagaagcggttaggattcttcgaatcccc 11136122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 338 - 580
Target Start/End: Complemental strand, 17827208 - 17826959
Alignment:
Q  338 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||| ||||||| ||||||||| || || |||| || |||||||||| |||| |||||||||||||| ||| ||||||||||||| |||||||||    
T  17827208 actgatggttggatatggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaa 17827109  T
Q  438 tttgcgtaacttatttttgtaattttgacgatataaaagata-----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 526  Q
    || |||| ||||||||||    ||||||| ||||||||||||            |||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  17827108 ttcgcgttacttattttt---tttttgacaatataaaagataagggttaaaagagttgcaatttttatatgtttgcaacatagc-agtttacttgttttt 17827013  T
Q  527 ggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||||||| ||||||| ||| || |||| ||| |||| |||||    
T  17827012 ggttgcagaaaagtaagcaacggttagaattctttgaattcccttgtttatatt 17826959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 341 - 479
Target Start/End: Original strand, 9516771 - 9516908
Alignment:
Q  341 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaattt 440  Q
    ||||||| |||||||||||||||| ||||| |||||   |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |     
T  9516771 gatggtcagatatgacaagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactc 9516870  T
Q  441 gcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||| ||||||||||||||  ||||||||||||||||||    
T  9516871 gcgttacttatttttgtaa-gttgacgatataaaagata 9516908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 565
Target Start/End: Complemental strand, 22413123 - 22412940
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||| ||||||||||||||||||| ||| |||||||  |||||||| |||||||   || |||||||||||||| ||||||| |||||||| ||    
T  22413123 gtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 22413025  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 565  Q
     ||||||| ||||||||||||| |||||||| | ||||| || |||||||| ||| |||||||| ||||||||||||| |||||||    
T  22413024 tgttgcaacttttatctgtttgtaacagagcgaatttacctg-ttttggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 21841762 - 21841574
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||| |||||||||||| | | ||| ||| |||||||| |||||||| |||| ||   || |||||||||||||| ||||||| |||||||| ||    
T  21841762 gtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttatttttgtaagtttgacggtataaaagtta 21841663  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||| |||||||| ||||||||||| || |||||||||||  |||  ||| || |||||||||| |||||||||||    
T  21841662 ggttgcaatttttatctgattgcaacaaagcaagtttacttg-ttttggttgcaagaaatgaagtagtggttaggattcttcgaatcccc 21841574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 384 - 569
Target Start/End: Complemental strand, 23009464 - 23009282
Alignment:
Q  384 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 483  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||    
T  23009464 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagtt 23009367  T
Q  484 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||| ||||||| ||||||||||||||||| ||||| || ||||||||| |||  ||||| ||||| |||||| | |||||||||||    
T  23009366 gcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23009282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 384 - 569
Target Start/End: Original strand, 23778900 - 23779082
Alignment:
Q  384 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 483  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||    
T  23778900 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagtt 23778997  T
Q  484 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||| ||||||| ||||||||||||||||| ||||| || ||||||||| |||  ||||| ||||| |||||| | |||||||||||    
T  23778998 gcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23779082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 9726007 - 9726120
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 9726106  T
Q  440 tgcgtaacttattt 453  Q
    ||||| ||||||||    
T  9726107 tgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 340 - 569
Target Start/End: Complemental strand, 27124606 - 27124369
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| |||||  |||||||| ||||| ||||| | ||||||||||||||| || | ||||||||| ||| ||||||||||||||  |||||||||    
T  27124606 tgatggtcgaatatggaaagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaatt 27124507  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
      ||| ||||||||||| | ||  |||||||||||| ||| |           || |||||||||| ||||||||||||||||||||||| ||| || ||    
T  27124506 ctcgttacttatttttgaactt--gacgatataaaacataagggttaaaagacttccaatttttatatgtttgcaacagagcaagtttacctgtctt-gg 27124410  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||||||||| |||| || ||||||||    
T  27124409 ttgcagaaaagtaagcagcggttaagattctttgaatcccc 27124369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 22813783 - 22813607
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||| |||||||||||  |||| ||||| | |||||||||| |||| ||| |||||||   || ||||||||||||   ||||||  |||||||| ||    
T  22813783 gtaatatagtgataagtaatgtattgtatctatagggattgtcctttcatccgaacaattcttgttacttatttttgtcggtttgacagtataaaagtta 22813684  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    || |||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||| ||||    
T  22813683 ggatgcaatttttatttgtttgcaacaaagcaagtttacctg-ttttggttgcagaaaagtaagtagcggttatgatt 22813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 23232057 - 23231859
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||||||||||| ||||| |||| | | | ||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||    
T  23232057 gtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgatataaaagtta 23231958  T
Q  480 --gg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
      ||         |||||| |||||||||||||||||||||||| ||||| || ||||||||  ||||||||||||| || |||||||| ||||||||||    
T  23231957 acggttagaagtcttgcaa-ttttatctgtttgcaacagagcaaatttacttg-ttttggttatagaaaagtaagcaacgtttaggattcttcgaatccc 23231860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 20005879 - 20005792
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcgaatcccc 20005792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 434
Target Start/End: Complemental strand, 20005994 - 20005899
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    |||||||||||||| ||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||    
T  20005994 ctgatggtcggatacgacaagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 580
Target Start/End: Original strand, 14637012 - 14637104
Alignment:
Q  488 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||  || ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||| || |||||    
T  14637012 tttttatcttattacaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaatccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 23645861 - 23645765
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  ||| | |||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttg 23645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 482 - 569
Target Start/End: Complemental strand, 20145083 - 20144996
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  20145083 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccc 20144996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 22187756 - 22187843
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  22187756 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccc 22187843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 537
Target Start/End: Complemental strand, 22410401 - 22410234
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaag 476  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||  ||| ||||||||||   |  ||||||||   |||||||    
T  22410401 gtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttattttt---aagttgacgatataataaaag 22410305  T
Q  477 atagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 537  Q
    ||| |          ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  22410304 ataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcagaaa 22410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 23143723 - 23143806
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23143723 caagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 551
Target Start/End: Original strand, 17382214 - 17382275
Alignment:
Q  489 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 551  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 479 - 580
Target Start/End: Original strand, 24475191 - 24475292
Alignment:
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc-cccctgttcat 577  Q
    |||||||||| ||||||||||||||||| | ||||||||| |||||| ||||||||||||||||| || |||||||||| |||||||| |||||||| ||    
T  24475191 aggttgcaatctttatctgtttgcaacaaaacaagtttacctgtttt-ggttgcagaaaagtaagtagtggttaggattcttcgaatctcccctgtttat 24475289  T
Q  578 att 580  Q
    |||    
T  24475290 att 24475292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 14079420 - 14079331
Alignment:
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||||||||| || |||||| | | ||||||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  14079420 gttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattcccc 14079331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 589
Target Start/End: Complemental strand, 12183290 - 12183185
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatattc 581  Q
    ||||||| ||||||||||||||||| |||||||| || |||||| |||| |||||||||||||| ||||||||||| ||||||||||||| || |||||     
T  12183290 ttgcaatgtttatctgtttgcaacatagcaagtt-acctgtttt-ggttacagaaaagtaagcaacggttaggattcttcgaatccccctatttatattg 12183193  T
Q  582 ttcgacat 589  Q
    || |||||    
T  12183192 ttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 366 - 453
Target Start/End: Complemental strand, 17299919 - 17299832
Alignment:
Q  366 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||| ||||| | |||||||||||||||||||||||||||||  |  ||||||||||||| ||||||||||||||||| ||||||||    
T  17299919 aaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 17729154 - 17729241
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgt 444  Q
    |||||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||||    
T  17729154 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgt 17729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 21679949 - 21679866
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||| || ||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21679949 caagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 12183429 - 12183331
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | |||||||||||||||||| ||||||||||| ||| |||||||| |||||||| |||||||  ||| |||||||||    
T  12183429 caagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttacttatttt 12183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 21907417 - 21907511
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||||||  | ||||| ||| ||||| ||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaa 21907511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 28933733 - 28933660
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||  ||||||||    
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttatttt 28933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 25927417 - 25927305
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||| | ||||| | |||||||||||||||||||| ||||||||| ||| ||||| | |||||||||||||||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaatt 25927318  T
Q  440 tgcgtaacttatt 452  Q
      ||| |||||||    
T  25927317 cacgttacttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 21672533 - 21672450
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||| || ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21672533 caagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 15466371 - 15466468
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | ||||||||||| || ||||||||||||||||| |||||||||| ||||||| |||||||| |||| | |||||||    
T  15466371 caagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagttatttt 15466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 357 - 438
Target Start/End: Complemental strand, 18075485 - 18075404
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||||  ||||| | |||||||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||    
T  18075485 aagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaat 18075404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 357 - 454
Target Start/End: Complemental strand, 21688892 - 21688795
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||  |||| ||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||| | |||||| |||| |||| |||||||||    
T  21688892 aagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttatttt 21688795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 566
Target Start/End: Complemental strand, 22566127 - 22566039
Alignment:
Q  477 ataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    |||| |||||||||||||||||||||||||   |||||| || | |||||| ||| |||||||||||||||||||||||||||| |||||    
T  22566127 atagattgcaatttttatctgtttgcaacactacaagtt-acctatttttgattgtagaaaagtaagcagcggttaggattttttgaatc 22566039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 482 - 567
Target Start/End: Complemental strand, 23645727 - 23645644
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 567  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||| || || ||||||    
T  23645727 ttgcaatttttatttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagcagtggttaggcttctttgaatcc 23645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 28933620 - 28933534
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||| || |||||||||||| | || |||||||||    
T  28933620 ttgcaatttttatctgtttgcaacagagcaag-ttacttgttcttggttgca-aaaaggaaacagcggttaggactctttgaatccccc 28933534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 566
Target Start/End: Original strand, 1635110 - 1635183
Alignment:
Q  491 ttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    |||||||||||||||| |||||||| ||||||||| ||||| |||||||||| |||||||||||||| ||||||||    
T  1635110 ttatctgtttgcaacaaagcaagtt-acatgtttt-ggttgtagaaaagtaaacagcggttaggattcttcgaatc 1635183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 571
Target Start/End: Original strand, 9838499 - 9838582
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||| |||||||||| ||  ||||| |||||||||||||||||||  |||||||||| ||| |||||||||    
T  9838499 aatttttatctgtttgcaaaagagcaagtt-acccgtttt-ggttgcagaaaagtaagcaatggttaggattcttcaaatccccct 9838582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 17382131 - 17382216
Alignment:
Q  341 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgttt 426  Q
    |||||| ||||||| ||| ||||| ||||| ||||| |   ||||||||||| |||||||||||||||| ||||||||||||||||    
T  17382131 gatggtaggatatggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgttt 17382216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 19244610 - 19244667
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||    
T  19244610 gtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 8241414 - 8241499
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||||||||||| |||||| |||| ||  |||||||| ||||||||||||||| |||| || |||| ||||||||||    
T  8241414 ttgcaatttttatctgtttgcaacatagcaag-ttacctg--tttggttgtagaaaagtaagcagcagtta-gactttttgaatccccct 8241499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 11176935 - 11177049
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | |||||||||  |||| |||||   ||| |||||||||||||||||||||||||| ||| || |||||||||| || ||| ||||    
T  11176935 tgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataatt 11177034  T
Q  440 tgcgtaacttatttt 454  Q
     | || |||||||||    
T  11177035 cgtgttacttatttt 11177049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 22567825 - 22567939
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||  ||||| | ||||||| |||| ||||| ||||| ||||| ||| ||||||| ||||||||||||||| |    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaact 22567924  T
Q  440 tgcgtaacttatttt 454  Q
      ||| |||||||||    
T  22567925 cacgttacttatttt 22567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 4339761 - 4339834
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||| |||||| ||||| || | |||||||||    
T  4339761 taataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttatttt 4339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 15466509 - 15466577
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 553  Q
    |||||| |||||||||||||||||||||||||||   |  | ||||||||||||||||||| ||||||||||    
T  15466509 ttgcaaattttatctgtttgcaacagagcaagtt---acctatttggttgcagaaaagtaaacagcggttag 15466577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 22566236 - 22566163
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||||||||||||||||| |||| ||| | ||||||| |||||| || ||||| |||| ||||||||    
T  22566236 gtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 7543034 - 7542962
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatt 452  Q
    |||||||||||||||||| |||||||||||||   ||| ||| ||||| ||||||||||| |||| |||||||    
T  7543034 gtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgttacttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 28586145 - 28586057
Alignment:
Q  340 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    |||||||||||| | ||||||| ||| ||||| |||||   |||||||| |||||||||||||||| |||| ||| |||||||||||||    
T  28586145 tgatggtcggatttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttc 28586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 8241278 - 8241359
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||||| ||||| | |||| ||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||    
T  8241278 caagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaatt 8241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 459
Target Start/End: Complemental strand, 17883878 - 17883780
Alignment:
Q  360 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 459  Q
    ||||| ||||| ||||| | ||||||| ||| | ||||||| |||| ||| |||||||||||| |||||||||||||||| | || ||||| ||||||||    
T  17883878 tgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttacttacttttgtaa 17883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 569
Target Start/End: Original strand, 21907577 - 21907659
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||||||||||||||||| |||  | |||||||||||| ||||| || ||||||||| || | || ||||||||    
T  21907577 aatttttatctgtttgcaacagagcaag-ttagctatttttggttgcaaaaaaggaaacagcggttacgactctttgaatcccc 21907659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 9838381 - 9838455
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| ||| ||  |||||| | |||| |||||||||    
T  9838381 gtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt 9838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 580
Target Start/End: Complemental strand, 17883771 - 17883705
Alignment:
Q  514 tttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||| ||| |||||||| ||| |||||    
T  17883771 tttacctgtttttggttggagaaaagtaagcagcgtttatgattcttcaaatcccccagtttatatt 17883705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 24252186 - 24252131
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||    
T  24252186 aatttttatctgtttgcaacagagcaagttt-cgtg-ttttggttgcagaaatgtaag 24252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 454
Target Start/End: Complemental strand, 9899074 - 9898958
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtg-ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||||||||| |  ||||||||||| ||||  ||||| | ||||||||||  | ||||||||||| ||||| || |||||||| ||||||| ||||| |    
T  9899074 ctgatggtcgggttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaacca 9898975  T
Q  438 tttgcgtaacttatttt 454  Q
    ||  ||| |||||||||    
T  9898974 ttcacgttacttatttt 9898958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 14636923 - 14636987
Alignment:
Q  411 acagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 475  Q
    ||||| ||||||||| |||| |||||||| | || |||||||||| ||| |||||||||||||||    
T  14636923 acaggaattgtcgttccgtctaaacaattcgtgttacttatttttataagtttgacgatataaaa 14636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 456
Target Start/End: Complemental strand, 24252287 - 24252227
Alignment:
Q  396 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||   || |||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttttg 24252227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 407
Target Start/End: Complemental strand, 14079542 - 14079491
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgta 407  Q
    ||||||||| ||||| ||||| | || |||||||||||||||||||||||||    
T  14079542 caagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 557
Target Start/End: Complemental strand, 25927265 - 25927192
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||| || ||| || || |||||||||||||    
T  25927265 ttgcaatttttatctgtttgcaatagagcaag-ttacctg-ttttggtttcataaatgttagtagcggttaggatt 25927192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 557
Target Start/End: Original strand, 9516921 - 9516998
Alignment:
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||| || ||||||||||| |||||| ||||||||||| |  ||||| |||||||||| ||||||||  ||||||||    
T  9516921 aggttgtaagttttatctgttagcaacatagcaagtttacct-attttgattgcagaaaattaagcagccattaggatt 9516998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 18075331 - 18075297
Alignment:
Q  523 ttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||||||||||||||||||| ||||    
T  18075331 ttttggttgcagaaaagtaagcagcggttaagatt 18075297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 21932150 - 21932100
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgt 406  Q
    ||||||||| ||||  ||||| | |||||||||||||||||||||||||||    
T  21932150 caagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 24251541 - 24251611
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta 450  Q
    |||||||||| ||||| |||| |||| ||| |||||| ||||||| | |||||||||||| |||| |||||    
T  24251541 gtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Original strand, 11177089 - 11177161
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    |||||||||||||  |||||||||| |||||| |||| ||||||| ||| || ||||| || ||||||||||||    
T  11177089 ttgcaatttttataagtttgcaacatagcaag-ttacctgttttttgttacataaaaggaaacagcggttagga 11177161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 21672394 - 21672323
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||| |||||||| ||||||| |||| || |||| |||||| |||||||||  ||||||||||    
T  21672394 ttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgttgcataaaagtaagtggcggttagga 21672323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 21679810 - 21679739
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||| |||||||| ||||||| |||| || |||| |||||| |||||||||  ||||||||||    
T  21679810 ttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgttgcataaaagtaagtggcggttagga 21679739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 6e-54; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 338 - 580
Target Start/End: Complemental strand, 15375999 - 15375758
Alignment:
Q  338 actgatggtcggat-atgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    |||||||||||||| ||| ||||||||| ||||| ||||| |  ||||||| |||||||||||||||| |||| |||||||||||||||||||||||| |    
T  15375999 actgatggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaa 15375900  T
Q  437 atttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaa 536  Q
    |||||| | ||||||||||| ||  |||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||  | | |||||||||||| ||    
T  15375899 atttgcattacttatttttgcaa-gttgacggtataaaa-ttagattgcaatttttatttgtttgcaacagagcaagttcgcctatttttggttgcataa 15375802  T
Q  537 aagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||| | ||||||||||| ||||||||||||| | ||||||    
T  15375801 aagtaagtaacggttaggattcttcgaatccccctatacatatt 15375758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 340 - 565
Target Start/End: Original strand, 17431868 - 17432103
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||||  ||||||||||||||||| |||| |||||||||||| ||||||||| |    
T  17431868 tgatggtcggatatgacaagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaact 17431967  T
Q  440 tgcgtaacttatttttgtaa-ttttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
      ||  |||||||||| ||| ||||| |||||||||| |||           |||| ||||||| ||||||||||||||||||||||||| || ||||||    
T  17431968 cacgctacttatttttataagttttggcgatataaaatataagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttg-ttttgg 17432066  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaat 565  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17432067 ttgcagaaaagtaagcagcggttaggattcttcgaat 17432103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 380 - 566
Target Start/End: Complemental strand, 20564155 - 20563969
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | |||||||||||||||||| ||| |||||||  ||||||||||||  ||   || |||||||||||||| ||||||| ||||||||      
T  20564155 gtaataaagttagtaagtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttatttttgtaagtttgacggtataaaagtg 20564056  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  20564055 ag-ttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttaggattcttcgaatc 20563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 343 - 580
Target Start/End: Complemental strand, 24245655 - 24245407
Alignment:
Q  343 tggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 442  Q
    |||||||||||| |||||||   |||||  |||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||    
T  24245655 tggtcggatatgtcaagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgc 24245556  T
Q  443 gtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 529  Q
    || ||||||||||||||  ||||  |||||||||||             ||||| | |||||||| ||||| ||||| ||||||||||| || |||| ||    
T  24245555 gttacttatttttgtaa-gttgagaatataaaagataaaagggttagaaaggtttcgatttttatttgtttccaacaaagcaagtttacctg-ttttagt 24245458  T
Q  530 tgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  24245457 tgcagaaaagtaagcaacggttaggattcttcgaatccccctgtttatatt 24245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 23388912 - 23388724
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| ||    
T  23388912 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagtta 23388813  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||| |||||||||||||||||| | ||||| ||  |||| ||| |||||   ||||||| ||||||||| |||||||||||    
T  23388812 ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagttaggattcttcgaatcccc 23388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 28664799 - 28664986
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||  | ||||| |||| |||||| | |||||||  ||| ||||||||||| || ||||||| |||||||  ||    
T  28664799 gtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttttgcaagtttgacggtataaaa-tta 28664897  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     || ||||||||||||||||||||||||||| | ||||| || |||||||||||||||| |||||| |||||| |||| |||||||||||    
T  28664898 agtcgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcagaaaaataagcaacggttaagattcttcgaatcccc 28664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 19004332 - 19004153
Alignment:
Q  348 ggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaac 447  Q
    ||||||| ||||||||| ||||| ||||| | ||||||||||||||||| |||||||||||| ||| |||||||| ||| ||||||||||||  ||| ||    
T  19004332 ggatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttac 19004233  T
Q  448 ttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagttta 517  Q
    |||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||| |||||||||    
T  19004232 ttatttttgtaagtttgacgatataaaagataagggttaaatagttgcaatttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 380 - 568
Target Start/End: Original strand, 20858710 - 20858896
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||| ||||||||||||||||||||| || | ||||||| ||| |||| |||||||   || |||||||||||||| ||||||| |||||||| ||    
T  20858710 gtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 20858808  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
     ||| ||||||||||| |||||||||| ||| | ||||| |  ||||||||||| |||||||||||||||||||||||  |||||||||    
T  20858809 agttacaatttttatcggtttgcaacaaagcgaatttacct-attttggttgcataaaagtaagcagcggttaggattcgtcgaatccc 20858896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 392 - 569
Target Start/End: Complemental strand, 16523852 - 16523677
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 491  Q
    |||||||||||| ||||| |||||| ||||| |||||||| |||||||   || ||||| |||||||| ||||||  | |||||| ||| ||||||||||    
T  16523852 taagtagagtattgtatccacagggtttgtcctttcgtccgaacaattattgttacttagttttgtaagtttgacagtttaaaag-tag-ttgcaatttt 16523755  T
Q  492 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||| | ||||| ||||||| |||  ||||||||||||||||||||||||| || ||||||||    
T  16523754 tatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatcccc 16523677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 367 - 568
Target Start/End: Complemental strand, 20315517 - 20315305
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    |||| ||||| | ||||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||| ||||||||||||||| | |  |||||    
T  20315517 aatcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttgac 20315418  T
Q  467 gatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
    |||||||||  || |            ||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||| |||| |||||    
T  20315417 gatataaaatttaagggataaagaaacttgcaatttttatctgtttgcaacaaagcaagtttacatg-ttttggttgcaaaatagtaagaagcgattagg 20315319  T
Q  555 atttttcgaatccc 568  Q
     || ||||||||||    
T  20315318 gttcttcgaatccc 20315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 17315174 - 17314987
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| |||| ||| |||||||   || |||||||||||||| ||||  | ||||||||| |    
T  17315174 gtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttttgtaagtttgttggtataaaaga-a 17315076  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     ||| |||||||||||| ||||||| ||||| |  |||| || ||||||||||| |||||||||||||||||| |||| || ||||||||    
T  17315075 agttacaatttttatctttttgcaatagagcgaagttacctg-ttttggttgcaaaaaagtaagcagcggttaagattctttgaatcccc 17314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 423 - 580
Target Start/End: Complemental strand, 20744699 - 20744532
Alignment:
Q  423 gtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaa 512  Q
    |||||||||||||| ||  ||| |||||||||||||| |||||||||||||||| || |          ||||||||||||||||||||||||| |||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgcaatttttatctgtttgcaacatagcaa 20744600  T
Q  513 gtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc-cctgttcatatt 580  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  20744599 gtttacctgtttt-ggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatatt 20744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 567
Target Start/End: Original strand, 24140454 - 24140658
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    |||| ||||| | |||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| |||| || ||||||| | |  || ||    
T  24140454 aatcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatatttttattaagttaac 24140553  T
Q  467 gatata------aaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggattttt 560  Q
    ||||||      ||||| |  || |||||||||||||| ||| ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||| ||    
T  24140554 gatataagggttaaagaga-cttccaatttttatctgtgtgcgacagagcaagtttacct-attttggttgcagaaaagtaagcaacggttaggattctt 24140651  T
Q  561 cgaatcc 567  Q
    | |||||    
T  24140652 caaatcc 24140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 392 - 569
Target Start/End: Complemental strand, 20549766 - 20549592
Alignment:
Q  392 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 491  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||||  ||  | | |||||||| ||| ||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtaggtta-atggtataaaag-tag-ttgcaatttt 20549670  T
Q  492 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    || |||||| ||||||||  | ||||| |||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  20549669 tacctgtttacaacagagtgattttacctgtttttggttgcaggcaagtaagcagcggttaggattcttcgaaacccc 20549592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 340 - 571
Target Start/End: Original strand, 34128622 - 34128862
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||| ||| ||||||||| || || || || | |||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||||    
T  34128622 tgatggtcggaaatggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaatt 34128720  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 527  Q
      |||  ||||||||| ||| || || | |||||||| || |            ||| |||||| |  ||||||||| ||||||||||||| |||||| |    
T  34128721 ctcgtttcttatttttataagtt-gaaggtataaaagttaagggttaaaaagacttgaaattttgacttgtttgcaatagagcaagtttacctgtttt-g 34128818  T
Q  528 gttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  34128819 gttgcagaaaagtaagcaacggttaggattcttcgaatccccct 34128862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 17185462 - 17185547
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  17185462 gacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaatt 17185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 18208362 - 18208264
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaatt 18208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 25550602 - 25550519
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||  ||||| ||||| | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  25550602 caagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaatt 25550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 18937733 - 18937846
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| |||| || |||||||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||    
T  18937733 tgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaatt 18937831  T
Q  440 tgcgtaacttatttt 454  Q
      ||| |||||||||    
T  18937832 cacgttacttatttt 18937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 454
Target Start/End: Complemental strand, 17171650 - 17171553
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||| ||||||||||  | ||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| |||| | |||||||    
T  17171650 aagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 566
Target Start/End: Original strand, 39434460 - 39434676
Alignment:
Q  352 atgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttat 451  Q
    ||||||||||||| || || ||||| | |||||||| |||||||||||  |||||||| ||| |||||||| ||| |||||||||||| |||| ||||||    
T  39434460 atgacaagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttat 39434558  T
Q  452 ttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 539  Q
    |||| | |  ||||||||||||||| || |            |||||||||||||||||||||||        |||||| |||||| | |||||||||||    
T  39434559 ttttattaacttgacgatataaaagttaagggttaaaaagaattgcaatttttatctgtttgcaa--------gtttacctgtttt-gtttgcagaaaag 39434649  T
Q  540 taagcagcggttaggatttttcgaatc 566  Q
    |||||| ||||||||||| ||||||||    
T  39434650 taagcaacggttaggattcttcgaatc 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 22755506 - 22755605
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  |||||||||||  |||| ||||| | ||||| ||| |||||||||||||||||||| | | ||||||||||||| |||||||||||    
T  22755506 tgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaatt 22755605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 19283969 - 19283855
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  |  ||||| || ||||| ||||| |  ||||||||||||||||||||||| ||||| ||| | |||  ||||||||||||||||||    
T  19283969 tgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatt 19283870  T
Q  440 tgcgtaacttatttt 454  Q
    ||| |||||||||||    
T  19283869 tgcttaacttatttt 19283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 15469919 - 15470020
Alignment:
Q  338 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||| ||||||||  | ||||||||| ||||| ||||| | |||||||||||||| || |||||||||||| ||| | |||||||||||||| ||||||    
T  15469919 actgacggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaa 15470018  T
Q  438 tt 439  Q
    ||    
T  15470019 tt 15470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 542
Target Start/End: Original strand, 18937889 - 18937945
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18937889 caatttttatctgtttgcaacagagcaag-ttacatgtttttggttgcagaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 36175134 - 36175234
Alignment:
Q  355 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||| ||||| ||||| | ||||||||||| |  ||||||||||||||| | | |||||||||||||||||||||||  ||||| |||||||||    
T  36175134 acaagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttatttt 36175232  T
Q  455 tg 456  Q
    ||    
T  36175233 tg 36175234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 490 - 568
Target Start/End: Original strand, 26835796 - 26835872
Alignment:
Q  490 tttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    ||||||||||||||||||||| | ||||| ||||||  |||||||||||||| ||||| ||||||||| ||||||||||    
T  26835796 tttatctgtttgcaacagagcgaatttacctgtttt--gttgcagaaaagtatgcagcagttaggattcttcgaatccc 26835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 15690803 - 15690877
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||||||||||||||||||| ||  | ||||||||||||||||| |||||  ||| ||||||||||    
T  15690803 taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt 15690877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 24267052 - 24266955
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || ||| |||||||||||| | || |||||||||    
T  24267052 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 24343683 - 24343586
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || ||| |||||||||||| | || |||||||||    
T  24343683 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 454
Target Start/End: Original strand, 34487640 - 34487736
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||| ||||  ||||| | ||||||||||| |||||||| |||| |||| ||| |||||||||||||||| |||||||| |||| |||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttatttt 34487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 454
Target Start/End: Complemental strand, 25402405 - 25402337
Alignment:
Q  386 aagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||| |||| |||||||||    
T  25402405 aagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttatttt 25402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 486 - 570
Target Start/End: Complemental strand, 26121280 - 26121197
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||||||||| ||||||||||  | | ||||||||| |||||||||||| || |||||||||| || |||||||||    
T  26121280 aatttttatctgtttgcaagagagcaagttatc-tatttttggttacagaaaagtaagtagtggttaggattctttgaatccccc 26121197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 476
Target Start/End: Original strand, 19051551 - 19051669
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||| ||||| ||||| | ||||||||||||||||| |||| |||||||  |||||||||| ||| | || ||||||||   || |||||||||||    
T  19051551 aagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatc-ccagggattgttgttccatctaaacaattcttgttacttatttttg 19051649  T
Q  457 taattttgacgatataaaag 476  Q
    ||| ||||| || |||||||    
T  19051650 taagtttgatgacataaaag 19051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 24852287 - 24852173
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||| ||||  | ||||| ||| |||||  |||| | |||||||| ||||||||| ||||||||||| ||| ||||||| |||||||| |||||||    
T  24852287 ctgatggttggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaat 24852188  T
Q  439 ttgcgtaacttattt 453  Q
    |  ||| ||||||||    
T  24852187 tcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 15690916 - 15691002
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||| |||| | |||||||||| || || |||||| ||||||||||||||||||||  ||||||||| |||||||||||||    
T  15690916 ttgcaatttttatttgttcgtaacagagcaaatt-acctgtttt-ggttgcagaaaagtaagcag-tgttaggattcttcgaatccccct 15691002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 571
Target Start/End: Complemental strand, 18208212 - 18208123
Alignment:
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    |||||||||||||||||||||||||  |||||||| |||| ||  |||||||||||||||||||| ||| ||||  | | |||||||||||||    
T  18208212 aggttgcaatttttatctgtttgcagtagagcaag-ttacctg--tttggttgcagaaaagtaagtagcagttacaactcttcgaatccccct 18208123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 24265435 - 24265364
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||||||||||| | |||||||| || | | ||| ||||||||||||||||||||||||||||    
T  24265435 ttgcaatttttatctgtttgcaataaagcaagtt-acct-tatttagttgcagaaaagtaagcagcggttagga 24265364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 24342066 - 24341995
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||||||||||| | |||||||| || | | ||| ||||||||||||||||||||||||||||    
T  24342066 ttgcaatttttatctgtttgcaataaagcaagtt-acct-tatttagttgcagaaaagtaagcagcggttagga 24341995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 566
Target Start/End: Original strand, 36175272 - 36175354
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    ||||||||||||||||||| ||||| |||||| |||| || ||||||||| ||||||||||| |||||||| |||| || |||||    
T  36175272 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 36175354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 20744925 - 20744866
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtaga 399  Q
    ||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||| |||||    
T  20744925 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataaagtgatatgtaga 20744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 24260655 - 24260728
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||||||||||||||||||||| |||| |  ||||||||||||||| || || |||||||| ||||    
T  24260655 ttgcaatttttatctgtttgcaacagagcaag-ttacct-attttggttgcagaaatgttaggagcggttatgatt 24260728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 26120867 - 26120965
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    |||||||| ||||  ||||| | ||||||||||  ||||||||||||| |||  | | ||||||||||||||||||||||||| || | |||||||||||    
T  26120867 aagtgtaccaaattgtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttatttttg 26120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 540
Target Start/End: Original strand, 34487777 - 34487832
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 540  Q
    ||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  34487777 ttgcaatttttatctgttttcaacagagcaa-tttacatg--tttggttgcagaaaagt 34487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 438
Target Start/End: Complemental strand, 24167681 - 24167600
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||  ||||| ||||| | ||||||||||  ||||||||||||| |||  ||| ||||||||||||| ||||||||||    
T  24167681 aagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 403
Target Start/End: Complemental strand, 19086294 - 19086230
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtat 403  Q
    |||||| ||||||  || |||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  19086294 ctgatgatcggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 19086230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 455
Target Start/End: Complemental strand, 26121437 - 26121323
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||  | |||||||| || |||||||||||| ||||| ||||||||| | ||||| |||||  ||||    
T  26121437 tgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatttttgtttcatccaataaatt 26121339  T
Q  440 tgcgtaacttattttt 455  Q
    || || ||||| ||||    
T  26121338 tgtgttacttactttt 26121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 515
Target Start/End: Original strand, 22755664 - 22755694
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtt 515  Q
    |||||||||||||||||||||||||||||||    
T  22755664 caatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 24260560 - 24260617
Alignment:
Q  399 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 456  Q
    ||||||||||| ||| |||||||| ||||||||||| |||  |||| |||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttttg 24260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 571
Target Start/End: Complemental strand, 25402297 - 25402209
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    |||||||||||||||||||| || ||||  ||||| | | ||| |||||||||||||||| ||| |   ||||||||||||||| |||||    
T  25402297 ttgcaatttttatctgtttgtaatagaggtagtttcc-tatttctggttgcagaaaagtacgcaacatgtaggatttttcgaatgcccct 25402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 101; Significance: 9e-50; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 380 - 568
Target Start/End: Original strand, 21301 - 21488
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||   || || ||||||||||| ||||||| |||||||| ||    
T  21301 gtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatatttttgtaagtttgacggtataaaagtta 21400  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
     |||||||||||||| |||||||||||||| |||||||| || |||||||| |||||||||||| |||| |||||||| ||||||||||    
T  21401 agttgcaatttttatttgtttgcaacagaggaagtttacctg-ttttggtttcagaaaagtaagtagcgattaggattcttcgaatccc 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 384 - 569
Target Start/End: Original strand, 25015 - 25199
Alignment:
Q  384 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 483  Q
    |||| |||||||| |||||||||||  ||||| ||||||  |||||||||||||||   || |||||||||||||| ||||||| |||||||| || |||    
T  25015 taaaatgataagttgagtatcgtatacacaggaattgtctgttcgtccaaacaattattgttacttatttttgtaagtttgacggtataaaagttaagtt 25114  T
Q  484 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  25115 gcaatttttctctatttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcaacggttaggattcttcaaatcccc 25199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 380 - 566
Target Start/End: Complemental strand, 16230016 - 16229831
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||  |||||||||||||||||| |||||||||||| ||| ||||  ||||||   || |||||||||||||| ||||| | |||||||| ||    
T  16230016 gtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttatttttgtaagtttgatggtataaaag-ta 16229918  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
     |||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16229917 agttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 21301919 - 21302149
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || ||||||||||    
T  21301919 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttattttt 21302018  T
Q  456 gtaattttgacgat---ataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    ||||  ||||||||   ||||||||||           |||| ||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||    
T  21302019 gtaa-attgacgatataataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgattgcagaaaaataa 21302117  T
Q  543 gcagcggttaggatttttcgaatccccctgtt 574  Q
     |||||||||||||| ||||||||||||||||    
T  21302118 acagcggttaggattcttcgaatccccctgtt 21302149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 8770044 - 8770232
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| |||||| |||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| ||    
T  8770044 gtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagtta 8770143  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8770144 ggttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccc 8770232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 381 - 569
Target Start/End: Original strand, 8765143 - 8765330
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatag 480  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| |||    
T  8765143 taataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagttag 8765242  T
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||| |||||||||||    
T  8765243 gttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaagattcttcgaatcccc 8765330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 385 - 569
Target Start/End: Complemental strand, 12754981 - 12754797
Alignment:
Q  385 aaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttg 484  Q
    |||||||||| |||||||||||||| |||  ||||||| ||||||   |||||||  | | |||||||||||||| ||||||  |||||||| || |||     
T  12754981 aaagtgataattagagtatcgtatccacaatgattgtcctttcgtatgaacaattctctttacttatttttgtaactttgacagtataaaagttaagttt 12754882  T
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 12754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 383 - 569
Target Start/End: Complemental strand, 17438502 - 17438305
Alignment:
Q  383 ataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata--- 479  Q
    ||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||| | |||       
T  17438502 ataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatataataaataaag 17438403  T
Q  480 ---------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
             | ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  17438402 gtttagaaagcttgcaatttttatctgtttgcaacagagcaattttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaatcccc 17438305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 340 - 568
Target Start/End: Original strand, 19908292 - 19908531
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||  ||||||||| ||||| ||||| |  ||||||| ||||||||| ||||||||||| ||| || | ||||||||||||||||||||    
T  19908292 tgatggtcggatattgcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaatt 19908391  T
Q  440 tgcgtaacttatttttgta-attttgacgatataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
      |||||| ||||||| |  | |||||||||||||||| || |          ||| ||||||||| | ||||||||| ||||||||||| | |||||||    
T  19908392 cacgtaacctattttttttcagtttgacgatataaaagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttgg 19908491  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  19908492 ttgcagaaaagtaagcagcagttaggattcttcgaatccc 19908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 568
Target Start/End: Original strand, 22349410 - 22349615
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||  | | ||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T
Q  456 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||  |||||  |||||||| |||||||||||||||||||||||||     ||||| ||||  |  |||| ||||||||||| ||| |||||||||| |    
T  22349510 gtaa-gttgacagtataaaagttaggttgcaatttttatctgtttgc-----agcaaatttatct-attttagttgcagaaaaataaacagcggttagaa 22349602  T
Q  556 tttttcgaatccc 568  Q
    |||||||||||||    
T  22349603 tttttcgaatccc 22349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 570
Target Start/End: Original strand, 12411136 - 12411373
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||| | ||||||||| |||||  |||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatt 12411235  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 528  Q
    |  || |||||||||| ||| ||||| |||||||||| || |           ||||||||||||  ||||||||||| | ||||||||| ||  |||||    
T  12411236 taggttacttatttttctaagtttgatgatataaaagttaagggtttagaaatttgcaattttta--tgtttgcaacacaacaagtttacctg--tttgg 12411331  T
Q  529 ttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||| ||||||   ||||||||||| ||||||||||||    
T  12411332 ttgcagaacagtaagtgacggttaggattcttcgaatccccc 12411373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 367 - 565
Target Start/End: Original strand, 932754 - 932963
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    |||| ||||||| |||||||| |||||| |||||||||||||| |||| ||||||| ||||||||||| ||||  | | |||||||||| ||| ||||||    
T  932754 aatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagtttgac 932853  T
Q  467 gatataaaagata--ggttg----------caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
    | |||||||| ||  ||||           |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||     
T  932854 gttataaaagttaaaggtttaaaagacttacaatttttatttgtttgcaacagagcaagtttacttgtttt-ggttgcagaaaagtaagcagcggttagt 932952  T
Q  555 atttttcgaat 565  Q
    ||| |||||||    
T  932953 attcttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 20023615 - 20023427
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaaga 477  Q
    |||||||||| | |||||| ||||| |||||||||||||||||| |||||||| |||||||    | |||||||||||||| |||||||| || |||||     
T  20023615 gtaataaagttagtaagtaaagtattgtatcaacagggattgtcctttcgtccgaacaattcttcttacttatttttgtaagttttgacggtacaaaagt 20023516  T
Q  478 taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
     ||  |||||||||||||||||||||||||||| | |||||  | ||||||||||||||||||||| ||| ||||||||| || ||||||||    
T  20023515 gag--tgcaatttttatctgtttgcaacagagcgaatttaccag-ttttggttgcagaaaagtaagtagcagttaggattctttgaatcccc 20023427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 562
Target Start/End: Complemental strand, 27413957 - 27413778
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | ||||||||||||| |||| | |||||||||| ||||| |  |||||||   || ||||||||||||| ||| |||| |||||||| |    
T  27413957 gtaataaagttagtaagtagagtatcatatccaaagggattgtcctttcgactgaacaattcttgttacttatttttgtagttt-gacg-tataaaagtt 27413860  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcg 562  Q
      ||| |||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  27413859 --gttacaatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcg 27413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 394 - 569
Target Start/End: Complemental strand, 19910020 - 19909847
Alignment:
Q  394 agtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattttta 493  Q
    |||||||||||||||| |||||||||||| |||| | | |||||||   || |||||||||||||| ||||||  |||||||| ||| ||||||||||||    
T  19910020 agtagagtatcgtatccacagggattgtcctttctttcgaacaattctagttacttatttttgtaagtttgaccgtataaaag-tag-ttgcaattttta 19909923  T
Q  494 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||| |||| || | |||   ||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  19909922 tctctttgtaaaaaagcgcatttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatcccc 19909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 367 - 569
Target Start/End: Original strand, 4650243 - 4650450
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 466  Q
    |||| ||||| | ||||||||||||| |||| ||||||||||| |||||||||||| ||||| |||||||||| |||| |||||||      |  |||||    
T  4650243 aatcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt------aagttgac 4650336  T
Q  467 gatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 554  Q
    |||| ||||| || |            |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  4650337 gatacaaaagttaagggttaaaaagacttgcaatttttatctgtttgcaacggagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttagg 4650435  T
Q  555 atttttcgaatcccc 569  Q
    ||| |||||||||||    
T  4650436 attcttcgaatcccc 4650450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 12806004 - 12805890
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | ||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatt 12805905  T
Q  440 tgcgtaacttatttt 454  Q
    ||||| |||||||||    
T  12805904 tgcgttacttatttt 12805890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 8169910 - 8170096
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||||||  |||||| | ||||||||| |||| |||| |  |||||||| |||||||   || |||||||||||||| || |  | |||||||| ||    
T  8169910 gtaataaagtagtaagtaaaatatcgtatccacagagatttttctttcgtccgaacaattctagttacttatttttgtaagtt-gttggtataaaag-ta 8170007  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    | ||| ||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8170008 g-ttgtaatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccc 8170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 354 - 580
Target Start/End: Complemental strand, 16245829 - 16245593
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| || || ||||| | ||||||||||||||||||||||||| |||| ||| ||||| || ||||||||||||||||  ||| ||||||||    
T  16245829 gacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttacttattt 16245730  T
Q  454 ttgtaattttgacgata---taaaagat---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 538  Q
    | ||    ||||| |||   |||||||    |||         ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  16245729 tagt----ttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagtt-acctgtttttggttgcagaaaa 16245635  T
Q  539 gtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||| ||| | ||||||||||| || |||||    
T  16245634 gtaagcagcggttagaattctccgaatccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 397 - 557
Target Start/End: Complemental strand, 19576265 - 19576107
Alignment:
Q  397 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatct 496  Q
    ||||||||||||| | | |||||||| |||||||| |||||||   || ||||| |||||||| ||| ||| |||||||| ||| |||||||||||||||    
T  19576265 agagtatcgtatccagatggattgtcctttcgtccgaacaattctagttacttacttttgtaagtttaacggtataaaag-tag-ttgcaatttttatct 19576168  T
Q  497 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||| ||  | ||||| | |||||||||||||||||| |||||||||||||||||    
T  19576167 gtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttaggatt 19576107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 570
Target Start/End: Complemental strand, 21303314 - 21303228
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  21303314 ttgcaatttttatctgtttgcaacagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattatttgaatccccc 21303228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 557
Target Start/End: Complemental strand, 19925697 - 19925508
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    ||||||| |||||| ||||||||||||||| ||| |||||||| ||||||||||| |||| |||| |||||||||| | |  || |||||||||||  ||    
T  19925697 gtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataaaattta 19925598  T
Q  480 gg-------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
     |             |||||||||| || ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||    
T  19925597 agggttaaaagagacttgcaatttt-atatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggatt 19925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 396 - 568
Target Start/End: Original strand, 19167452 - 19167620
Alignment:
Q  396 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 495  Q
    |||||||||||||| ||| ||||| || |||||||| |||||||   || |||||||||||||| || |||  |||||||  | ||||||||||||||||    
T  19167452 tagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttgtaagtt-gacagtataaaa--ttggttgcaatttttatc 19167548  T
Q  496 tgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    ||||||||| | ||| | ||||| | ||||||||||||| |||||||||| ||||||||||| || |||||||    
T  19167549 tgtttgcaataaagcgaatttacctatttttggttgcag-aaagtaagcaacggttaggattatttgaatccc 19167620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 356 - 580
Target Start/End: Original strand, 41508368 - 41508602
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||  | |||||||||||||| ||||| |||||||||  | ||||||||||||| ||||||||||||||| | ||||||||||    
T  41508368 caagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttattttt 41508467  T
Q  456 gtaattttgacgata---taaaagat---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 540  Q
       | ||||||||||   |||||||    |||         ||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  41508468 ---aatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagtt-acatgtttt-ggttgcagaaaagt 41508562  T
Q  541 aagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    || ||||||||| |||| || |||||||||| || |||||    
T  41508563 aaccagcggttaagattctttgaatccccctctttatatt 41508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 8889226 - 8889130
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 476  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||| | |||||||  ||| |||||||||||||| ||||||| ||||||||    
T  8889226 gtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttttgtaagtttgacggtataaaag 8889130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 486
Target Start/End: Complemental strand, 19171908 - 19171803
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||| |||| ||| |||  ||| |||||||||||||||||||||||||||| | |||||||||||| |  ||||||||||||||| ||    
T  19171908 gtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttatttttgt-aggttgacgatataaaagtta 19171810  T
Q  480 ggttgca 486  Q
    |||||||    
T  19171809 ggttgca 19171803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 31286129 - 31286017
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    |||||||||||||  ||||||||||| ||||| ||||| | ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||||||||||    
T  31286129 ctgatggtcggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaat 31286032  T
Q  439 ttgcgtaacttattt 453  Q
    || ||| ||||||||    
T  31286031 ttccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 569
Target Start/End: Complemental strand, 8883094 - 8882997
Alignment:
Q  472 aaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||| || |||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||| ||||| || ||||||||| |||||||||||    
T  8883094 aaaagctaagttgcaatttttatctgtttgcaacatagcgagtttacctatttttagttgcagaaaattaagctgcagttaggattcttcgaatcccc 8882997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 3116516 - 3116419
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||  ||| |||||||||    
T  3116516 caagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttatttt 3116419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 8557203 - 8557130
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| |  ||||||||||||| ||||||||    
T  8557203 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 554
Target Start/End: Original strand, 20429695 - 20429920
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||  | || |||||| ||||  ||||| | |||||||| ||||||||||||||||||||| | | |||||||| |||| |||| ||||||    
T  20429695 tgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaatt 20429794  T
Q  440 tgcgtaacttatttttgtaattttgacgat---ataaaaga-----------taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 525  Q
     |||| |||||||||  ||| |||||||||   ||||||||            || ||||||||||||| ||||||||||||||||||||||  |  |||    
T  20429795 cgcgttacttatttt--taagtttgacgatataataaaagagtaagggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatct-attt 20429891  T
Q  526 tggttgcagaaaagtaagcagcggttagg 554  Q
    ||||||||||||||||| ||| |||||||    
T  20429892 tggttgcagaaaagtaatcagtggttagg 20429920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 568
Target Start/End: Complemental strand, 12805850 - 12805766
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 568  Q
    |||||||||||||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||| |||||||||| ||||||||||    
T  12805850 ttgcaatttttatctgtttgcaacagag-aaaattacctg-atttggttgcagaaaagtaagcaggggttaggattcttcgaatccc 12805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 21325341 - 21325439
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||  ||||| | |||||||| ||||||||| ||||||||||| |||   ||||||||||||||||||||||||| || |||||||||    
T  21325341 caagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttatttt 21325439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 356 - 437
Target Start/End: Original strand, 10744903 - 10744984
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 437  Q
    ||||| ||| ||||| ||||| | ||||||||||||||||||||||||||| || | |||||||||||||||||| ||||||    
T  10744903 caagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaa 10744984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 571
Target Start/End: Original strand, 5508477 - 5508562
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccct 571  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| ||| ||||  |||||| |||||||||||||    
T  5508477 aatttttatctgtttgcaatagagcaag-ttacatgttttttgttgcagaaaagtaa-cagtggttagaggattcttcgaatccccct 5508562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 10917919 - 10917999
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  10917919 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaaca 10917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 18736771 - 18736672
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||| |||||  ||||||||||||| |||||| | |||| ||||||||    
T  18736771 gacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttacttattt 18736673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 482 - 580
Target Start/End: Complemental strand, 2167577 - 2167481
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||||||||||||| | |||||| || |||||| |||||  |||||||||| || |||||||||| ||||||||||||| || |||||    
T  2167577 ttgcaatttttatctgtttgcaacataccaagtt-acctgtttt-ggttgtggaaaagtaagaagtggttaggattcttcgaatccccctatttatatt 2167481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 439
Target Start/End: Complemental strand, 821602 - 821529
Alignment:
Q  366 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||    
T  821602 aaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaatt 821529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 2167716 - 2167632
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||| ||||| || || | |||||||||||||||||||||||||||||| |||   | |||||||||||||||||||||    
T  2167716 gacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaatt 2167632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 571
Target Start/End: Original strand, 10745040 - 10745127
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||||||||| ||||||| | ||||  | |||||||||||||||    
T  10745040 ttgcaatttttatctatttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagcaacagttaaaaattttcgaatccccct 10745127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 12759386 - 12759459
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||||| ||||  ||||| | |||||||||||||||||||||||||||||| ||| | |||||||||||    
T  12759386 gacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttc 12759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 17155931 - 17156015
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||||||||||||||   |  | |||||||||||||||||||| |||| |||||| | || ||||||||    
T  17155931 ttgcaatttttatctgtttgcaacagagcaagtt---acctatttggttgcagaaaagtaagtagcgattaggactatttgaatcccc 17156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 28728969 - 28729038
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 449  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||  |||||||||| |||| ||||    
T  28728969 gtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 482 - 542
Target Start/End: Complemental strand, 3116380 - 3116321
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 542  Q
    ||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  3116380 ttgcaatttttatctgtttgcaacagagcaag-atacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 453
Target Start/End: Complemental strand, 21825965 - 21825870
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||| ||||| |||||   ||||||||||| |||||||||||||||||| ||| ||||| | |||||||||||||| || |||| ||||||||    
T  21825965 aagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 21325480 - 21325565
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||| |||||||||||||||| |||| |   |||||||||||||||||||| |||||||| |||| |||| ||||||    
T  21325480 ttgcaatttttatctatttgcaacagagcaag-ttacct-aatttggttgcagaaaagtaagtagcggttatgattcttcgcatcccc 21325565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 5508337 - 5508434
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||| | | ||||||||||||||||| ||||||  |||| ||| ||||||||||||||||||||||  | |||| |||||||||    
T  5508337 caagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttacttatttt 5508434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 454
Target Start/End: Complemental strand, 21303452 - 21303354
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||  ||||| ||||| |  ||||||| ||||||||||||||||||| | |||  |||||| ||||| |||||||||||| ||| |||||||||    
T  21303452 caagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttatttt 21303354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 569
Target Start/End: Complemental strand, 7495045 - 7494989
Alignment:
Q  513 gtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||| |||||||||||| |||||||||||||| | |||||||| |||||||||||    
T  7495045 gtttacctgtttttggttgtagaaaagtaagcagggattaggattattcgaatcccc 7494989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 8319051 - 8319123
Alignment:
Q  367 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||| ||||| | ||||| |||||||||||||| ||| ||||| ||||||||| ||||||||| |||||||||    
T  8319051 aatcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaatt 8319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 552
Target Start/End: Complemental strand, 2723790 - 2723727
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 552  Q
    ||||||||||||||||||||| |||||| |||| ||  |||||||||| ||||||||||||||||||    
T  2723790 aatttttatctgtttgcaacaaagcaag-ttacctg--tttggttgcaaaaaagtaagcagcggtta 2723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 577
Target Start/End: Original strand, 8445960 - 8446053
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 577  Q
    |||||||||||||| |||||||||||| |||||| || |   || ||||||||||| |||||||| |||||||||| || |||||||||| |||||    
T  8445960 ttgcaatttttatcagtttgcaacagaacaagtt-acctccatt-ggttgcagaaatgtaagcagtggttaggattctttgaatccccctattcat 8446053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 18736628 - 18736559
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    ||||||||| |||||||||| || |||||| || |||||| |||||||||||| ||||||||||||||||||    
T  18736628 aatttttatttgtttgcaaccgaacaagtt-acctgtttt-ggttgcagaaaaataagcagcggttaggatt 18736559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 429
Target Start/End: Original strand, 6289887 - 6289977
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgt 429  Q
    |||||||||||||  | ||| ||||  ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||| || ||||||    
T  6289887 ctgatggtcggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgt 6289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 13908322 - 13908253
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    |||||||| ||||||||| | || |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  13908322 aagtgtaccaaatcttttccaag-taataaagtgataagtagagtatcatatccatagggattatcgtttc 13908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 482 - 543
Target Start/End: Complemental strand, 21825829 - 21825770
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 543  Q
    |||||||||||||||||||| |||| |||||| |||| | ||||||||||||||||||||||    
T  21825829 ttgcaatttttatctgtttgtaacatagcaag-ttacct-tttttggttgcagaaaagtaag 21825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 409
Target Start/End: Complemental strand, 18458524 - 18458469
Alignment:
Q  354 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 409  Q
    ||||||||||| ||||  ||||  | ||||||||||||||||||||||||||||||    
T  18458524 gacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatc 18458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 566
Target Start/End: Complemental strand, 19171799 - 19171744
Alignment:
Q  511 aagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    |||||||  ||||||| |||||||||||||| |||| |||||||||| ||||||||    
T  19171799 aagtttatctgttttttgttgcagaaaagtatgcagtggttaggattcttcgaatc 19171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 8143767 - 8143838
Alignment:
Q  496 tgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    ||||||||||||| |||||| || |||||| ||||||||||| ||||||| ||||||||||| || |||||||||    
T  8143767 tgtttgcaacagaacaagtt-acctgtttt-ggttgcagaaa-gtaagcaacggttaggattcttggaatccccc 8143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 8445848 - 8445901
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||||| |||||||||||| || || ||| ||||||||||||||||||||    
T  8445848 gtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttcgtccaaa 8445901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 10923150 - 10923228
Alignment:
Q  358 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    ||||||| ||||| ||||| | ||||||||||||||| || ||||||||||| ||  ||||||| ||||| || |||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaaca 10923228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 455
Target Start/End: Complemental strand, 7495151 - 7495094
Alignment:
Q  398 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||| ||| ||| |||| ||||||||||||||||||||  ||| ||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattttt 7495094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 569
Target Start/End: Complemental strand, 7478285 - 7478229
Alignment:
Q  513 gtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||| ||||||| |||| ||||| |||||||| | |||||||| |||||||||||    
T  7478285 gtttacctgtttttagttgtagaaatgtaagcagggattaggattattcgaatcccc 7478229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 897 - 696
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||   ||| |||||||||| ||| |||||||||||||||||||    
T  897 gtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatataaaagata 798  T
Q  480 gg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 567  Q
     |            |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||| |||||| ||    
T  797 agggtttagaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaagattcttcgaaccc 698  T
Q  568 cc 569  Q
    ||    
T  697 cc 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 356 - 557
Target Start/End: Original strand, 69914 - 70125
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||| ||||| ||||| | |||||||||||| ||||| ||||||||||  ||| |||||||||||||||||||||||||  ||| ||||||||||    
T  69914 caagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattttt 70013  T
Q  456 gtaattttgacgatataaaagat-----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    || || |||| ||||||||||||           |||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  70014 gt-atgttgatgatataaaagataaaggttagaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagc 70112  T
Q  545 agcggttaggatt 557  Q
    ||| |||||||||    
T  70113 agcagttaggatt 70125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 98719 - 98779
Alignment:
Q  446 acttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagag 509  Q
    ||||||||||||| ||| |||||||||||||   ||||||||||||||||||||| ||| ||||    
T  98719 acttatttttgtagttt-gacgatataaaagt--ggttgcaatttttatctgtttacaatagag 98779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 569
Target Start/End: Original strand, 482 - 655
Alignment:
Q  395 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 493  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| |||||||  |||||||| || |||||||||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagttttgacagtataaaag-taagttgcaattttta 580  T
Q  494 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  581 tctgtttgcaacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 3556 - 3744
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| ||    
T  3556 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagtta 3655  T
Q  480 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||| |||||||||||||||||| | ||||| ||  |||| ||| |||||   ||||||| ||||||||| |||||||||||    
T  3656 ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagttaggattcttcgaatcccc 3744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 76442 - 76629
Alignment:
Q  380 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 478  Q
    |||||||||| | ||||||||||||| |||| |||||||||||  |||||||| |||||||   || ||||||||||||| ||  || | |||||||| |    
T  76442 gtaataaagttagtaagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttatttttgtagtt--gagggtataaaagtt 76539  T
Q  479 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    || |||||| |||||| ||||| ||||| ||||| ||||| |||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  76540 ag-ttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagcaccgattaggattcttcgaatcccc 76629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 393 - 569
Target Start/End: Complemental strand, 6764 - 6589
Alignment:
Q  393 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattttt 492  Q
    |||||||||||| |||| ||||||| |||   ||||||| |||||||   || || || |||| ||| ||||| ||||||||||  || |||||||||||    
T  6764 aagtagagtatcatatccacagggactgttcattcgtccgaacaattctagttacctagttttataagtttgatgatataaaagtgag-ttgcaattttt 6666  T
Q  493 atctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    |||||||||||| ||||  | ||||| ||||||||||| || |||||||||||||||| |||||| |||||||||||    
T  6665 atctgtttgcaatagagtgaatttacttgtttttggtttcaaaaaagtaagcagcggtcaggattcttcgaatcccc 6589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 569
Target Start/End: Complemental strand, 6098 - 5979
Alignment:
Q  449 tatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 548  Q
    ||||||||||| ||||| | ||||||||  || ||||||||||||||||||||||| ||||| | ||||| |||||||||||| ||||||||||| | ||    
T  6098 tatttttgtaagtttgaaggtataaaagtgag-ttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaagtaagtaacg 6000  T
Q  549 gttaggatttttcgaatcccc 569  Q
    || |||||| |||||||||||    
T  5999 gtcaggattcttcgaatcccc 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 72148 - 72235
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  || |||||| |||||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaatcccc 72235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 438
Target Start/End: Original strand, 729 - 811
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 438  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  729 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaat 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 571
Target Start/End: Original strand, 871 - 954
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||| ||||||||||||||| |||  ||| ||  |||||||| |||||| |||||||||||||||| | || ||||||||||    
T  871 caatttttacctgtttgcaacagagtaag-atacctg--tttggttgtagaaaactaagcagcggttaggactctttgaatccccct 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 463 - 263
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat- 478  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||| |  ||||| | |||  |||||||||||||||||     
T  463 gtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatatttatataa-gttgacgatataaaagata 365  T
Q  479 -agg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
     |||           |||||||||||||||| |||||| |||||||| | || |||||||||||  |||||  |||||||| ||||||||| ||||||||    
T  364 aagggttagaaagtcttgcaatttttatctgcttgcaatagagcaag-taacctgtttttggttttagaaatataagcagccgttaggattcttcgaatc 266  T
Q  567 ccc 569  Q
    |||    
T  265 ccc 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 380 - 504
Target Start/End: Original strand, 234366 - 234490
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
    |||||||||||||||||| ||||||||| | |||| ||||||| |||||||| |||||||   || |||||||||||||| ||| ||  |||||||| ||    
T  234366 gtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaattcttgtcacttatttttgtaagtttaactctataaaagtta 234465  T
Q  480 ggttgcaatttttatctgtttgcaa 504  Q
      |||||||||||||||||||||||    
T  234466 tattgcaatttttatctgtttgcaa 234490  T

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Target: scaffold0008; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 48304 - 48169
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||||||||||||||||||||||||   | ||||||||  |||||||||||||||    
T  48304 tgatggtcggatatggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaatt 48207  T
Q  440 tgcgtaacttatttttgtaattttgacgatataaaagata 479  Q
      | | ||||||||||||||  |||||||| |||||||||    
T  48206 ctc-ttacttatttttgtaa-gttgacgatgtaaaagata 48169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 454
Target Start/End: Original strand, 54845 - 54960
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcg-tttcgtccaaacaat 438  Q
    ||||||||||||  |  |||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| |      
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagc 54944  T
Q  439 ttgcgtaacttatttt 454  Q
    |||||| |||||||||    
T  54945 ttgcgttacttatttt 54960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 580
Target Start/End: Original strand, 55003 - 55097
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||| ||||||| ||| |||||||| || |||||||||||||| ||||| || ||  |||||||| | || |||||||||| || |||||    
T  55003 caatttttatttgtttgcgacatagcaagtt-acctgtttttggttgcacaaaagaaaacactggttaggactctttgaatccccctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 15785 - 15871
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||||  |||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagtt-acctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaatcccc 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 580
Target Start/End: Complemental strand, 36088 - 35857
Alignment:
Q  361 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaat 460  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||| |||| | || |||||||||   ||     
T  36088 gtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttatttt---aag 35992  T
Q  461 tttgacgatataa---aagat----agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 544  Q
    |||||||||| ||   ||||     |||         ||||||||||||||| |||| |||| || ||||| || || ||||||||||||||||||||||    
T  35991 tttgacgataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagtt-acctgattttggttgcagaaaagtaagc 35893  T
Q  545 agcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||| || |||||||||| || |||||    
T  35892 agcggttaggattcttagaatccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 39724 - 39810
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 570  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| || | || |||||||||    
T  39724 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcagcggttatgactctttgaatccccc 39810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 39585 - 39663
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    ||||||||| ||||  ||||| | ||||||||||||||||||||| |||||||| |||  |||||| |||| |||||||    
T  39585 caagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaa 39663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 570
Target Start/End: Original strand, 3154 - 3370
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgta-acttatttt 454  Q
    ||||||||| ||||  ||||| | ||||||||||| || ||||||||||||||| ||| |||||||| |||| |||||| |||||| | | ||  |||||    
T  3154 caagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatttggggatacaaatttt 3252  T
Q  455 tgtaattttgacgatataaa----agatag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 548  Q
    ||    | ||||||||||||    |||| |  |||||||||||||| |||||| || ||||||| ||||| |||||||||||  ||||||||||||||||    
T  3253 tgg---tctgacgatataaataaaagatggaagttgcaatttttatttgtttgtaatagagcaa-tttacctgtttttggttatagaaaagtaagcagcg 3348  T
Q  549 gttaggatttttcgaatccccc 570  Q
    |||| ||||||| |||||||||    
T  3349 gttatgattttttgaatccccc 3370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 580
Target Start/End: Complemental strand, 168256 - 168162
Alignment:
Q  485 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| || || ||||||||| | || ||||||||||||| |||||    
T  168256 caatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 168162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 427
Target Start/End: Complemental strand, 168413 - 168326
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 427  Q
    ||||||||| |||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  168413 ctgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 168326  T

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Target: scaffold0111 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 481 - 571
Target Start/End: Original strand, 3771 - 3861
Alignment:
Q  481 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 571  Q
    ||||||||||||||||| | |||||| || |||||||| | |||||| |||||||||||||||| |||||||||||| ||| |||||||||    
T  3771 gttgcaatttttatctgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttaggattcttccaatccccct 3861  T

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Target: scaffold0001 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 557
Target Start/End: Original strand, 69218 - 69293
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 557  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||   ||||||||| ||||||||||||||||||    
T  69218 ttgcaatttttatctgtttgcaacagagaaagtttacctgttcttacatgcagaaaaataagcagcggttaggatt 69293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 69106 - 69181
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    ||||||||||||||||| ||| |||||||| ||| ||||||||  ||  |||||||||||||| |  |||||||||    
T  69106 gtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgcttattttt 69181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 81488 - 81570
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||||| ||| ||||||| |||||||| ||| ||||    
T  81488 caagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtcaaaataatt 81570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 580
Target Start/End: Complemental strand, 43187 - 43090
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 580  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||  ||  |||||||| || | || ||||||||||||| |||||    
T  43187 ttgcaatttttatctgtttgcaacagagcaag-ttacctgtttttggttacagaaaacaaaatagcggttaagactctttgaatccccctgtttatatt 43090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 43301 - 43245
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 436  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||||||||| |||||    
T  43301 gtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaaca 43245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 6288 - 6385
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    ||||||||  ||||| ||||| | |||||||||| ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| || | ||||||||    
T  6288 caagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0941 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0941
Description:

Target: scaffold0941; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 1516 - 1606
Alignment:
Q  18 caagatcaaaggttggtcctcccaaaccttttagatg-agtgc---tattggaacttcagaggtttatctaatactcccacaaaattagct 104  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||   ||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  1516 caagatcaaaggttggtgctcccaagccttttagatgaagtgcctttattggaacttaagaggtttagctaattctcctacaaaattagct 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 2371 - 2469
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| |  |||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |||| | |||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 454
Target Start/End: Original strand, 2402 - 2500
Alignment:
Q  356 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||| ||||| ||||| |  |||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |||| | |||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 35562 - 35636
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    ||||||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||| || | |||||||||    
T  35562 gtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttatttt 35636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 35677 - 35762
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 569  Q
    ||||||||||||| ||| ||||||| |||||||| || |||||| ||||||||||| |||||||||||||| |||| ||| |||||||    
T  35677 ttgcaatttttatttgtctgcaacaaagcaagtt-acctgtttt-ggttgcagaaaggtaagcagcggttaagattcttcaaatcccc 35762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 454
Target Start/End: Complemental strand, 89967 - 89854
Alignment:
Q  340 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    ||||||||| ||  ||||||||||  ||||| ||||| | ||||||||||| ||||||||||||| |||| ||| | |||||||||||||| |||||| |    
T  89967 tgatggtcgaattagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaact 89869  T
Q  440 tgcgtaacttatttt 454  Q
     |||| |||||||||    
T  89868 cgcgttacttatttt 89854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 555
Target Start/End: Complemental strand, 89809 - 89742
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||| |||||||||||||| || |||||| || |||||| |||||||||||| ||||||||||||||||    
T  89809 aatttctatctgtttgcaaccgaacaagtt-acctgtttt-ggttgcagaaaaataagcagcggttagga 89742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  381 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 453  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||  ||||||||||||| | ||||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 181804 - 181726
Alignment:
Q  355 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 434  Q
    |||||||||| |||||  |||| | ||||||||||||||| | |||||||||||| |||  ||||||||||| |||||||    
T  181804 acaagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaa 181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 425
Target Start/End: Complemental strand, 15580 - 15494
Alignment:
Q  339 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 425  Q
    |||||||||||||  | ||||||||  ||||| ||||| | |||||||||| ||| ||||||||||||||| ||| |||||||||||    
T  15580 ctgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 555
Target Start/End: Original strand, 114631 - 114699
Alignment:
Q  486 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 555  Q
    ||||||||||||||||||||||| ||| || || |||||||||||||||||||| || || |||||||||    
T  114631 aatttttatctgtttgcaacagaccaaatt-acctgtttttggttgcagaaaaggaaacaacggttagga 114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 566
Target Start/End: Complemental strand, 5724 - 5641
Alignment:
Q  482 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 566  Q
    ||||||||||||||||||||||| ||| ||| || || |||||||||||| ||||||| || || ||||||||||| || |||||    
T  5724 ttgcaatttttatctgtttgcaatagaccaaatt-acctgtttttggttgtagaaaaggaaacaacggttaggattctttgaatc 5641  T

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Target: scaffold0672 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 439
Target Start/End: Original strand, 1759 - 1818
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||| ||  ||||||||    
T  1759 gtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaacaatt 1818  T

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Target: scaffold0427 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 2881 - 2818
Alignment:
Q  391 ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 454  Q
    |||||| |||||||||||| ||| | ||||||||||||||||||||||| | || |||||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttatttt 2818  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 455
Target Start/End: Original strand, 29909 - 30006
Alignment:
Q  357 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 455  Q
    |||||||| ||||| ||||| | ||||||||||| |||||||||||| ||||| | || ||||||||| ||   |||||||||| ||| ||||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttattttt 30006  T

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Target: scaffold0098 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 36602 - 36512
Alignment:
Q  18 caagatcaaaggttggtcctcccaaaccttttagatga-gtgc---tattggaacttcagaggtttatctaatactcccacaaaattagct 104  Q
    |||||||||||||| || ||||||| | ||||| |||| ||||   ||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  36602 caagatcaaaggttcgtgctcccaagcattttatatgaagtgcatttattggaacttaagaggtttagctaattctcctacaaaattagct 36512  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 7486 - 7427
Alignment:
Q  380 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 439  Q
    |||||||||||||||||||||||| ||||  ||| | |||||||||| ||| ||||||||    
T  7486 gtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaatt 7427  T

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