View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15540_low_11 (Length: 270)
Name: NF15540_low_11
Description: NF15540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15540_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 44442137 - 44442371
Alignment:
| Q |
16 |
atgaaacagacaaatgtgttttaactagcttctggtggattttggtcgctatacgcaacgattccaactaagnnnnnnnttcaccattccacccaatcaa |
115 |
Q |
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| T |
44442137 |
atgaaacagacaaatgtgttttaactagcttctggtggattttggtcgctatacgcaacgattccaactaagaaaaaa-ttcaccattccacccaatcaa |
44442235 |
T |
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| Q |
116 |
aatcttgcgatcaaaacaaagtaacatataatgcttataattttattaatccattcccaagattgattagctaattagaaaattcatgtaaattaataat |
215 |
Q |
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| T |
44442236 |
aatcttgcgatcaaaacaaagtaacatataatgcttataattttattcatccattcccaagattgattagctaattagaaaattcatgtaaattaataat |
44442335 |
T |
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| Q |
216 |
ttggatttttgttcattcatcaattattatacattg |
251 |
Q |
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| T |
44442336 |
ttggatttttgttcattcatcaattattatacattg |
44442371 |
T |
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