View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15540_low_13 (Length: 249)
Name: NF15540_low_13
Description: NF15540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15540_low_13 |
 | |
|
| [»] scaffold0648 (1 HSPs) |
| |
|
| [»] scaffold0274 (2 HSPs) |
| |
|
| [»] scaffold0271 (1 HSPs) |
| |
|
| [»] scaffold0640 (1 HSPs) |
| |
|
Alignment Details
Target: scaffold0648 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 2987 - 2751
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2987 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
2888 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
2788 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2787 |
actataccacagaagaagaaaatcctaaaactgcaaa |
2751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 229; Significance: 1e-126; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 21699 - 21935
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21699 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
21798 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21799 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
21898 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21899 |
actataccacagaagaagaaaatcctaaaactgcaaa |
21935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 2456 - 2221
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttggg-ttatttgaacttatcttgc |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
2456 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggagcatgtctcacttaaacttcttgggtttatttgaacttatcttgc |
2357 |
T |
|
| Q |
112 |
aacaattttaacggaactataccaaatggggactcaacttcaaag-ttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaa |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2356 |
aacaattttaacggaactataccaaatggggactcaacttcaaagtttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaa |
2257 |
T |
|
| Q |
211 |
aaactataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
2256 |
aaactgtaccac---agaagaaaatcctataactgcaaa |
2221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 11615 - 11850
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
11615 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgca |
11714 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11715 |
acaattttaacggaactatacc-aatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcagaactcctcttaaaa |
11813 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
11814 |
gctgtaccacaaaagaagaaaatcctaaaactgcaaa |
11850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 6520 - 6752
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6520 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagagcatgtctcacttaaacttcttgggttatttgaacttatcttgca |
6619 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6620 |
acaattttaacggaactatacc-aatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
6718 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
6719 |
actgtaccac---agaagaaaatcctataactgcaaa |
6752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 16678324 - 16678539
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||| || ||||||| |
|
|
| T |
16678324 |
aatatggaatctctcgacttctctaataataagttttctggtgaaattcctcagagtgcgtctctcttaaactttttgggttatttgaatttgtcttgca |
16678423 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||| |||||| || || || || |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| |||| |
|
|
| T |
16678424 |
acaattttgacggaaaaat-cccgataggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggagctcctctcaaaa |
16678522 |
T |
|
| Q |
213 |
actataccacagaagaa |
229 |
Q |
| |
|
||| ||||||| ||||| |
|
|
| T |
16678523 |
actgtaccacaaaagaa |
16678539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 25464164 - 25464398
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||| ||||||||| ||||||| | ||| || || ||||||||||||| |||||||||| ||||||| || |
|
|
| T |
25464164 |
aatatggaatctctcgatctttctaataacaagctttgtggtggaattcctcaaagcctggttctcttaaactttttgagttatttgaatttatcttaca |
25464263 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||| | |||| || |||| | || |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
25464264 |
acaattttgatggaaaaatcccaa-taggaactcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcggacttcctcttaaag |
25464362 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||||| |||||||||||||||||| ||||| |
|
|
| T |
25464363 |
agtgtaccacaaaagaagaaaatcctaaaaatgcaa |
25464398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 18117082 - 18117306
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||||||| | |||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||| | || |
|
|
| T |
18117082 |
aatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcagagcatgtctctcttaacttttttgggttatttgaatttatcataca |
18117181 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| |||||| || || ||| | || ||||||||||||||||||||||| ||||| |||| ||||||| |||||||||| |||||||||| | |
|
|
| T |
18117182 |
ataattttgacggaaaaat-cccaatagcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggcgctcctcttaata |
18117280 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcct |
238 |
Q |
| |
|
||| |||||| ||||||||||||||| |
|
|
| T |
18117281 |
actgtaccacggaagaagaaaatcct |
18117306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 18872764 - 18872529
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||| || |
|
|
| T |
18872764 |
aatatggaatctctcgatctctctagtaataagttttgtggtgaaattcctcagagcatgtctctgttacactttatgggttatttgaatttatcttaca |
18872665 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
||| |||| | |||| || || ||| || ||||||||||||||||||||||||||||| | |||| ||||| || |||||||| |||||| || | |
|
|
| T |
18872664 |
acagttttgaaggaaaaattcc-aattggaactcaacttcaaagttttaatgcatcgagttgcattgggaatcctaaactatgcggagatcctctcaata |
18872566 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
| | ||||||| ||||||||||||||||||||||||| |
|
|
| T |
18872565 |
attgtaccacaaaagaagaaaatcctaaaactgcaaa |
18872529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 19394267 - 19394498
Alignment:
| Q |
17 |
tggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaa |
116 |
Q |
| |
|
|||| ||||||||||| || ||||||||||||| ||||||||||||| | |||||| ||| |||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
19394267 |
tggaatctctcgatctttccaataataagttttatggtgaaattcctcaaagcatggctctcttaaactttttgggttatttgaatctatcttacaacaa |
19394366 |
T |
|
| Q |
117 |
ttttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaacta |
216 |
Q |
| |
|
|||| |||||| || || ||| || ||||||||||||||||||||||||||||| ||||||| ||||| || |||| ||| |||| |||| || | |
|
|
| T |
19394367 |
ttttgacggaaaaat-cccaataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcctaaactatgtggagctccacttagtaattg |
19394465 |
T |
|
| Q |
217 |
taccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
19394466 |
taccgcagaagaagaaaatcctaaaactgcaaa |
19394498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 19425804 - 19426038
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
19425804 |
aatatggaatctctcgatctctctaataataagttttgtggtgaaattcctcagagcatgtctgtcttaacctttttgggttttttgaatttatcttgca |
19425903 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| ||||| ||||||| || |||| | || || ||||||||||| ||||||||||||| || |||| ||||| || |||||||| ||||||| || | |
|
|
| T |
19425904 |
ataatttaaacggaaaaatcccaact-ggaacacaacttcaaagaattaatgcatcgagttacattgggaatcctaaactatgcggagctcctctcaata |
19426002 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||| |
|
|
| T |
19426003 |
attgtaccatgaaagaagaaaatcctaaaactgcaa |
19426038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 19462306 - 19462530
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||| | || |
|
|
| T |
19462306 |
aatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcggagcatgtctctcttaacttttttgggttatttgaatttatcataca |
19462405 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| |||||| || || ||| | || ||||||||||||||||||||||| ||||| |||| ||||||| |||||||||| |||||||||| | |
|
|
| T |
19462406 |
ataattttgacggaaaaat-cccaatagcaacgcaacttcaaagttttaatgcatcaagctacattggcaatccaaaattatgcggtgctcctcttaata |
19462504 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcct |
238 |
Q |
| |
|
||| |||||| ||||||||||||||| |
|
|
| T |
19462505 |
actgtaccacggaagaagaaaatcct |
19462530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 14895280 - 14895045
Alignment:
| Q |
9 |
gaagaatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatct |
108 |
Q |
| |
|
|||||||||||| ||||| || ||||||| ||||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||| |
|
|
| T |
14895280 |
gaagaatatggaatctcttgacctctctagtaataagttttatggtgaaattccgcagagcatgtctctcttaacatttttgggttatttgaatttatct |
14895181 |
T |
|
| Q |
109 |
tgcaacaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctctt |
208 |
Q |
| |
|
| |||||||||| |||||| || || || || |||||||||||||||||||||| ||||||||| |||| ||||| || |||||||| ||||| | |
|
|
| T |
14895180 |
tacaacaattttgacggaaaaattcc-aacaggaactcaacttcaaagttttaatgaatcgagctacattggaaatcctaaactatgcggagctcctgta |
14895082 |
T |
|
| Q |
209 |
aaaaactataccacagaagaagaaaatcctaaaactg |
245 |
Q |
| |
|
| || | |||||||||||||||||||||||| |||| |
|
|
| T |
14895081 |
accaattgtaccacagaagaagaaaatcctaacactg |
14895045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 17943068 - 17943303
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||| |||||| |||||||| ||||| |||||||||| |
|
|
| T |
17943068 |
aatatggaatctctagatctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaattttttgggggtgttgaatttatcttgca |
17943167 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| | |||| || || ||| || ||||||||||||||||||||||||||||| || |||| ||||| || |||| ||| |||||||||| | |
|
|
| T |
17943168 |
ataattttgatggaaaaat-cccaattggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgtggagctcctcttaata |
17943266 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaaa |
249 |
Q |
| |
|
| | |||||| ||||||||||||||||||||||||| |
|
|
| T |
17943267 |
attgtaccacgaaagaagaaaatcctaaaactgcaaa |
17943303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 19335126 - 19335360
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||| || |
|
|
| T |
19335126 |
aatatggaatctctcgatctctctaataataagttttatggtgaaattcctcggagcatgtctgtcttaacctttttgggttatttgaatttatcttaca |
19335225 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
||| |||| | |||| || |||| | || || |||||||||||||||||||||||||| || |||| ||||| || | |||||| ||||||| || | |
|
|
| T |
19335226 |
acagttttgaaggaaaaatcccaact-ggaacacaacttcaaagttttaatgcatcgagttacattgggaatcctaaactgtgcggagctcctctcaata |
19335324 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||| |
|
|
| T |
19335325 |
attgtaccatgaaagaagaaaatcctaaaactgcaa |
19335360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 18166270 - 18166504
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||||||||| ||||||||||||| ||||||| |||| ||||| |||||| ||||||||||| ||||||| || |
|
|
| T |
18166270 |
aatatggaatctctcgacctctctagtaataagttttatggtgaaattcctcagagcatctctctcttaacctttttaggttatttgaatttatcttaca |
18166369 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| || ||| |||||| || || ||| || |||||||||||||||||||||||||| || ||||||| ||||| || |||| ||| ||||||||| | |
|
|
| T |
18166370 |
ataactttgacggaa-taatcccaataggaactcaacttcaaagttttaatgcatcaagttatattgagaatcctaaactatgtggagctcctcttagta |
18166468 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||||| ||||| ||||| |||||||||||| |
|
|
| T |
18166469 |
attgtaccacaaaagaaaaaaattctaaaactgcaa |
18166504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 19354829 - 19355063
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||| || ||||||| ||||||||||| |||||| |||||| |||||||||||| ||||| |||||| ||||||||||| ||||||| || |
|
|
| T |
19354829 |
aatatggaatctcttgacctctctagtaataagttttatggtgacattcctcagagcatgtctctcttaacctttttaggttatttgaatttatcttaca |
19354928 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
|||||||| |||||| || || ||| || |||||||||||||||||||||||||| || || ||| ||||| || |||||||| ||||||| || | |
|
|
| T |
19354929 |
acaattttgacggaaaaat-cccaataggaactcaacttcaaagttttaatgcatcaagttacgttggaaatcctaaactatgcggagctcctctcaata |
19355027 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||| |
|
|
| T |
19355028 |
attgtaccaagaaagaagaaaatcctaaaactgcaa |
19355063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 19376732 - 19376954
Alignment:
| Q |
9 |
gaagaatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatct |
108 |
Q |
| |
|
|||||||||||| ||||| || ||||||| ||||||||||| ||||||||||||| ||| ||||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
19376732 |
gaagaatatggaatctcttgacctctctagtaataagttttatggtgaaattcctcagaccatgtctatcttaacctttttgggttatttgaatctatct |
19376831 |
T |
|
| Q |
109 |
tgcaacaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctctt |
208 |
Q |
| |
|
| |||||||||| | |||| || || ||| || ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| |||||||| |
|
|
| T |
19376832 |
tacaacaattttgatggaaaaattcc-aataggaactcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgcggagctcctctt |
19376930 |
T |
|
| Q |
209 |
aaaaactataccacagaagaagaa |
232 |
Q |
| |
|
|| || | |||| ||||||||||| |
|
|
| T |
19376931 |
aataattgtaccgcagaagaagaa |
19376954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 19382007 - 19382240
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||||| ||||| |||||||||| |
|
|
| T |
19382007 |
aatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgca |
19382106 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| | |||| || || || || |||||||||||||||||||||||||| || ||||||| ||||| || |||||||| |||||||||| | |
|
|
| T |
19382107 |
ataattttgatggaaaaat-cccaacaggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcggagctcctcttaata |
19382205 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgca |
247 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||| |
|
|
| T |
19382206 |
attgtaccataacagaagaaaatcctaaaactgca |
19382240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 19438072 - 19438305
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||| ||||||||||||| | ||||||||| ||||| |||||||| ||||||||| ||||| | | |
|
|
| T |
19438072 |
aatatggaatctctcgatctatctaataacaagttttttggtgaaattcctcaaggcatgtctctcttaacctttttggattatttgaatttatcatata |
19438171 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| |||||| || || | | || || ||||||||||||||||||||||||||||| |||| |||||| ||||||| ||| ||||||||| | |
|
|
| T |
19438172 |
ataattttgacggaagaatcccga-tcggaacgcaacttcaaagttttaatgcatcgagctacattggcaatcctaaattatgtggagttcctcttaata |
19438270 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgca |
247 |
Q |
| |
|
| | |||||| ||||||||||||||||||| |||| |
|
|
| T |
19438271 |
attgtaccacggaagaagaaaatcctaaaaatgca |
19438305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 19456411 - 19456645
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||| | || || ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| ||||| | || |
|
|
| T |
19456411 |
aatatggaatctctcgaattttccaaaaataagttttgtggtgaaattccacagagcatgtctctcttaacctttttgggttatttgaatttatcataca |
19456510 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| || ||| || || | | | || ||||||||||||||||| ||||||||||| |||| |||||| ||||||||||| |||||||||| | |
|
|
| T |
19456511 |
ataattttgacagaaaaatcccga-tagcaacgcaacttcaaagttttaacgcatcgagctacattggaaatccaaaattatgcggagctcctcttaata |
19456609 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||| ||||||||||||||||| ||||||| |
|
|
| T |
19456610 |
attgtaccaaggaagaagaaaatcctaagactgcaa |
19456645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 19465467 - 19465699
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| | |||||||||||| ||||| |||||||||| |
|
|
| T |
19465467 |
aatatggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggctctc-taaactttttggaggtgttgaatttatcttgca |
19465565 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| | |||| || || ||| || |||||||||||||||||||||| ||| || ||||||| ||||| || |||||||| |||||||||| | |
|
|
| T |
19465566 |
ataattttgatggaaaaattcc-aataggaactcaacttcaaagttttaatgtatcaagttatattgggaatcctaaactatgcggagctcctcttaata |
19465664 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgca |
247 |
Q |
| |
|
| | ||||| | |||||||||||||||||||||| |
|
|
| T |
19465665 |
attgtaccataacagaagaaaatcctaaaactgca |
19465699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 17726419 - 17726195
Alignment:
| Q |
17 |
tggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaa |
116 |
Q |
| |
|
|||| |||||||| ||||| || ||||| |||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||| |||||| |
|
|
| T |
17726419 |
tggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatgtcttcgttacactttttgggttatttgaatttatcttacaacaa |
17726320 |
T |
|
| Q |
117 |
ttttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaacta |
216 |
Q |
| |
|
||| | |||| || || ||| || ||||||||||||||||||||||||||||| ||||||| |||| | |||||||| |||||||||| || | |
|
|
| T |
17726319 |
gtttgatggaaaaat-cccaataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggagctcctcttaataattg |
17726221 |
T |
|
| Q |
217 |
taccacagaagaagaaaatcctaaaa |
242 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
17726220 |
taccatagaagaagaaaatcctaaaa |
17726195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 18109556 - 18109784
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||| |||||||||||| || | ||||||| ||| | |||||||||||||||||| ||||| | | |
|
|
| T |
18109556 |
aatatggaatctctcgacctctctaataacaagttttttggtgaaattccccagggtatgtctctcttgacctttttgggttatttgaatttatcatata |
18109655 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| | |||| || ||| | || || ||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||| |||||||||| | |
|
|
| T |
18109656 |
ataattttgatggaaaaatcccag-tcggtacacaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgtggatctcctcttaata |
18109754 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaa |
242 |
Q |
| |
|
| | |||||| |||||||||||| |||||| |
|
|
| T |
18109755 |
attgtaccacggaagaagaaaattctaaaa |
18109784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 18147944 - 18148168
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||| | |||||||| ||||||||||| ||||||| ||||||||||||| || ||||||||| ||||| ||||||| |||||||||| ||||| | | |
|
|
| T |
18147944 |
aatatgaaatctctcgacctctctaataacaagttttttggtgaaattcctcagggcatgtctctcttaacctttttgagttatttgaatttatcatata |
18148043 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| |||||| || || || || || ||||||||||||||||||||||||||||| |||| |||||| || |||||||| |||| ||||| | |
|
|
| T |
18148044 |
ataattttgacggaagaat-cccgatcggaacacaacttcaaagttttaatgcatcgagctacattggcaatcctaaactatgcggagctccccttaata |
18148142 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcct |
238 |
Q |
| |
|
| | |||||| ||||||||||||||| |
|
|
| T |
18148143 |
attgtaccacggaagaagaaaatcct |
18148168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 19027648 - 19027424
Alignment:
| Q |
17 |
tggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaa |
116 |
Q |
| |
|
|||| |||||||| ||||| || ||||| |||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||| |||||| |
|
|
| T |
19027648 |
tggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatgtcttcgttacactttttgggttatttgaatttatcttacaacaa |
19027549 |
T |
|
| Q |
117 |
ttttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaacta |
216 |
Q |
| |
|
||| | |||| || || ||| || ||||||||||||||||||||||||||||| ||||||| |||| | |||||||| |||||||||| || | |
|
|
| T |
19027548 |
gtttgatggaaaaat-cccaataggaactcaacttcaaagttttaatgcatcgagttatattgggaatcattatctatgcggagctcctcttaataattg |
19027450 |
T |
|
| Q |
217 |
taccacagaagaagaaaatcctaaaa |
242 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
19027449 |
taccatagaagaagaaaatcctaaaa |
19027424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 18017139 - 18017370
Alignment:
| Q |
16 |
atggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaaca |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||| ||||| ||||||||||| | |
|
|
| T |
18017139 |
atggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttgggggtgttgaatttatcttgcaata |
18017238 |
T |
|
| Q |
116 |
attttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaact |
215 |
Q |
| |
|
||||| | |||| || || || || ||||||||||||||| | ||||||| || ||||||| ||||| || | ||||| |||||||||| || | |
|
|
| T |
18017239 |
attttgatggaaaaat-cccaacaggaactcaacttcaaagtcgtgatgcatcaagttatattgggaatcctaaactgtgcggggctcctcttaataatt |
18017337 |
T |
|
| Q |
216 |
ataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
||||| | ||||||||||||||||||||||| |
|
|
| T |
18017338 |
gtaccataacagaagaaaatcctaaaactgcaa |
18017370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 19400844 - 19401042
Alignment:
| Q |
14 |
atatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaa |
113 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||| | |||||| ||||||||||| |
|
|
| T |
19400844 |
atatggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaa |
19400943 |
T |
|
| Q |
114 |
caattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaa |
213 |
Q |
| |
|
|||||| ||||||| || || ||| || ||||| |||||| |||| || |||| |||| |||| |||||| | ||||||||| ||||||||||||| |
|
|
| T |
19400944 |
taattttgacggaacaat-cccaataggatctcaaattcaaacttttgatccatcaagcttcattggaaatccaaagttatgcggagctcctcttaaaaa |
19401042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 17950949 - 17951182
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||| ||||||||||||| | | ||||||| ||| | ||||||| |||||||||| ||||| | | |
|
|
| T |
17950949 |
aatatggaatctctcgacctctctaataacaagttttttggtgaaattcctcatggtatgtctctcttgacctttttgagttatttgaatttatcatata |
17951048 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
| |||||| | |||| || || | || || ||||||||||||||||||||||||||||| |||| ||||| ||||||| ||| |||||||||| | |
|
|
| T |
17951049 |
ataattttgatggaaaaatcccgg-tcggtacacaacttcaaagttttaatgcatcgagctacattggcaatcttaaattatgtggatctcctcttaata |
17951147 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgca |
247 |
Q |
| |
|
| | | |||| ||||||||||||||||||| |||| |
|
|
| T |
17951148 |
attgttccacggaagaagaaaatcctaaaaatgca |
17951182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 19415298 - 19415532
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgca |
112 |
Q |
| |
|
|||||||| ||||| || ||||| ||||||||||| | |||||||||||| ||||||||||| ||||| |||||||| |||||| || ||||||| || |
|
|
| T |
19415298 |
aatatggaatctctagacctctcaaataataagttctacggtgaaattcctcagagcatgtctttcttaacctttttggattatttaaatttatcttaca |
19415397 |
T |
|
| Q |
113 |
acaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaa |
212 |
Q |
| |
|
||| |||| |||||| || || ||| || |||||||||||||||||||| ||||| || || | | ||||| || |||||||| |||||||||| | |
|
|
| T |
19415398 |
acagttttgacggaaaaat-cccaataggaactcaacttcaaagttttaacgcatcaagttacaacgggaatcctaaactatgcggagctcctcttaata |
19415496 |
T |
|
| Q |
213 |
actataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| | ||||| ||||||||||||||| |||||||| |
|
|
| T |
19415497 |
attgtaccatcaaagaagaaaatcctacaactgcaa |
19415532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 19352510 - 19352740
Alignment:
| Q |
17 |
tggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaacaa |
116 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||| ||| |||| ||| | |||||||||| | ||| || ||||||||||| || |
|
|
| T |
19352510 |
tggaatctctcgatctctctaataataagttttttggtgaaattccgcagaccatggctcgcctaaactttttagaggttttaaatttatcttgcaataa |
19352609 |
T |
|
| Q |
117 |
ttttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaacta |
216 |
Q |
| |
|
||| || |||| || |||| | || || ||||||||||||||||||||||| || || |||| ||||| | |||| ||| |||||||||| || | |
|
|
| T |
19352610 |
tttcaatggaaaaatcccaact-ggaacacaacttcaaagttttaatgcatcaagttacattgggaatcctagactatgtggagctcctcttaataattg |
19352708 |
T |
|
| Q |
217 |
taccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
||||| |||||||||||||||| ||||||| |
|
|
| T |
19352709 |
taccatgaaagaagaaaatcctaagactgcaa |
19352740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 18104754 - 18104846
Alignment:
| Q |
146 |
caacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaagaaaatcct |
238 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| |||||| || |||||||| |||||||||| |||| ||||| |||||||||||||| |
|
|
| T |
18104754 |
caacttcaaagttttaatgcatcaagctacattggcaatcctaaactatgcggagctcctcttaataactgtaccaggaaagaagaaaatcct |
18104846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 18104460 - 18104510
Alignment:
| Q |
13 |
aatatggagtctctcgatctctctaataataagttttgtggtgaaattcct |
63 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
18104460 |
aatatggaatctctcgacctctctaataacaagttttttggtgaaattcct |
18104510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 8460681 - 8460914
Alignment:
| Q |
14 |
atatggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaa |
113 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| | |||||| ||||||||||| |
|
|
| T |
8460681 |
atatggaatcactcgacctctctaataataagttttgtggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaa |
8460780 |
T |
|
| Q |
114 |
caattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaa |
213 |
Q |
| |
|
|||||| |||||| || || ||| || |||||||||||||||||||||||||||||||| |||| ||||| || | |||||| ||||||||| | |
|
|
| T |
8460781 |
taattttgacggaaaaat-cccaattggaactcaacttcaaagttttaatgcatcgagctacattggaaatcctaaactgtgcggagctcctcttagtag |
8460879 |
T |
|
| Q |
214 |
ctataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
| |||||| |||||||||||||||||||||||| |
|
|
| T |
8460880 |
ttgtaccacgaaagaagaaaatcctaaaactgcaa |
8460914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 2709456 - 2709231
Alignment:
| Q |
16 |
atggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaaca |
115 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||| ||||||||||||| |||||||| || | ||| || ||| | ||| || ||||||||||| | |
|
|
| T |
2709456 |
atggaatctctcgatctctctaacaataaattttttggtgaaattcctcagagcatggctatcataacctatttagaggttttaaatttatcttgcaata |
2709357 |
T |
|
| Q |
116 |
attttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaact |
215 |
Q |
| |
|
||||||| |||| || |||| | |||||||||||||| ||||||||||| |||||||| |||| || ||| ||||||||||| ||||||||||||||| |
|
|
| T |
2709356 |
attttaatggaaaaatcccaa-tagggactcaacttcagagttttaatgcttcgagctacattgggaacccacaattatgcggagctcctcttaaaaact |
2709258 |
T |
|
| Q |
216 |
ataccacagaagaagaaaatcctaaaa |
242 |
Q |
| |
|
||| ||||||||||||||| ||||| |
|
|
| T |
2709257 |
gtactgcagaagaagaaaatcataaaa |
2709231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 15536650 - 15536881
Alignment:
| Q |
16 |
atggagtctctcgatctctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgggttatttgaacttatcttgcaaca |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||| | | ||||| | ||||| |||||||||||||||||| ||||||||||| | |
|
|
| T |
15536650 |
atggaatctctcgatctctctaataataagttttatggtgaaattcctcaaaacatgtttgtcttaacctttttgggttatttgaatttatcttgcaata |
15536749 |
T |
|
| Q |
116 |
attttaacggaactataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaact |
215 |
Q |
| |
|
|||| || |||| || || ||| || || |||||||||||||||||||||||||| || |||| ||||| || | || ||| ||||||| || || | |
|
|
| T |
15536750 |
atttcaatggaaaaat-cccaattggaacacaacttcaaagttttaatgcatcgagttacattgagaatcctaaactgtgtggagctcctctcaataatt |
15536848 |
T |
|
| Q |
216 |
ataccacagaagaagaaaatcctaaaactgcaa |
248 |
Q |
| |
|
||||| ||||||||||||| ||||| |||| |
|
|
| T |
15536849 |
gtaccaagaaagaagaaaatcccaaaaccgcaa |
15536881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 13665817 - 13665600
Alignment:
| Q |
32 |
tctctaataataagttttgtggtgaaattccttagagcatgtctcacttaaactttttgg--gttatttgaacttatcttgcaacaattttaacggaact |
129 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
13665817 |
tctctaataataagttttttggtgaaattcctcggagcatgtctatcttaacctttttggaatatatttgaatttatctcacaacaattttgacggaaaa |
13665718 |
T |
|
| Q |
130 |
ataccaaatggggactcaacttcaaagttttaatgcatcgagctatattgccaatccagaattatgcggaactcctcttaaaaactataccacagaagaa |
229 |
Q |
| |
|
|| || || || |||||||||||||||||||||||||| || ||||||| ||||| || | || ||| |||||||||| || | ||||| ||||| |
|
|
| T |
13665717 |
at-ccctataggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactttgtggagctcctcttaataattgtaccatgaaagaa |
13665619 |
T |
|
| Q |
230 |
gaaaatcctaaaactgcaa |
248 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
13665618 |
gaaaatcctagaactgcaa |
13665600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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