View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15541_low_42 (Length: 204)
Name: NF15541_low_42
Description: NF15541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15541_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 32167671 - 32167840
Alignment:
| Q |
12 |
tgagatgaatgataagcaaacaaattggcagaaatatgtgttcaagagaaaaagtggcccacactgcttactaaggaagcaacagacaaaacgaattcca |
111 |
Q |
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| T |
32167671 |
tgagataaatgataagcaaa-aaattggcagaaatatgtgttcaagagaaaaagtggcccacactgcttactaaggaagcaacagacaaaacgatttcca |
32167769 |
T |
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| Q |
112 |
gtggggttacacttggaacttgttttcccttctaatctaatctaataatgttaaaattttattcaggttagtcct |
186 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32167770 |
gtggggttacacttggaacttgttttcccttctaat----tctaataatgttaaaattttattcaggttagtcct |
32167840 |
T |
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