View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15544_low_10 (Length: 419)
Name: NF15544_low_10
Description: NF15544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15544_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 92 - 334
Target Start/End: Original strand, 7143630 - 7143872
Alignment:
| Q |
92 |
gctcccataaaactcaactctccatacttaacactctttgaagcgtacagagaatttaaatttgacaacaacttaaatttgaactgccctacttaaatta |
191 |
Q |
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| T |
7143630 |
gctcccataaaactcaactctccatacttaacactctttgaagcgtacagagaatttaaatttgacaacaacttaaatttgaacagccctacttaaatta |
7143729 |
T |
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| Q |
192 |
taatttagtcgcatctacatttgctttatacatttgagggaaggattccaagtagttgaaaagattctaatatatactccattatgtttgatgtgctgag |
291 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
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| T |
7143730 |
taatttagtcgcatctacatttgctttatatatttgagggcaggattccaagtagttgaaaagattctaatatatactcgattatgtttgatgtcctgag |
7143829 |
T |
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| Q |
292 |
aagtgtcatgatggtttaaggacgaaattagagctgatttgaa |
334 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7143830 |
aagtgtcatgatggtttaaggacgaaattagaactgatttgaa |
7143872 |
T |
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