View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15544_low_24 (Length: 311)

Name: NF15544_low_24
Description: NF15544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15544_low_24
NF15544_low_24
[»] chr6 (3 HSPs)
chr6 (14-296)||(11165742-11166027)
chr6 (229-263)||(13772545-13772579)
chr6 (222-262)||(31875823-31875863)
[»] chr1 (3 HSPs)
chr1 (14-262)||(24276217-24276467)
chr1 (145-209)||(16111355-16111419)
chr1 (54-142)||(16111241-16111327)
[»] scaffold0120 (1 HSPs)
scaffold0120 (14-263)||(1844-2097)
[»] chr3 (3 HSPs)
chr3 (14-262)||(5704747-5704997)
chr3 (59-142)||(16972784-16972866)
chr3 (230-262)||(46403725-46403757)
[»] chr4 (3 HSPs)
chr4 (59-196)||(16163505-16163641)
chr4 (69-197)||(16167579-16167711)
chr4 (52-142)||(10276918-10277009)
[»] scaffold0006 (3 HSPs)
scaffold0006 (141-196)||(90144-90199)
scaffold0006 (224-264)||(199849-199889)
scaffold0006 (54-142)||(90029-90119)
[»] chr7 (5 HSPs)
chr7 (146-249)||(24883564-24883667)
chr7 (86-142)||(11676370-11676426)
chr7 (59-142)||(24883449-24883532)
chr7 (141-195)||(11676292-11676345)
chr7 (230-263)||(21490613-21490646)
[»] scaffold0069 (2 HSPs)
scaffold0069 (141-196)||(11680-11735)
scaffold0069 (54-142)||(11568-11656)
[»] chr2 (2 HSPs)
chr2 (126-195)||(11387890-11387958)
chr2 (54-142)||(23827635-23827724)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-142)||(356210-356299)
[»] chr8 (1 HSPs)
chr8 (222-262)||(4233100-4233140)


Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-135; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 11166027 - 11165742
Alignment:
Q  14 agatgaaatatgagcttgttgtgtgattgaagcgtactcgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 113  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11166027 agatgaaatatgagcttgatgtgtgatcgaagcgtacttgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 11165928  T
Q  114 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatat-ttttaa 212  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11165927 cttctaaaatacttttgaattctattattaaggagtaattttttattgatttatttttaacagtttatctttctattagtttcactcaaatattttttaa 11165828  T
Q  213 agaaacata--atttttaagtaatgtcttggatcaaaatatggggcgttacactacctattctcagaaacatatatgacattagtg 296  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11165827 agaaacatatcatttttaagtaatgtcttggatcaaaatctggggcgttacactacctattctcagaaacatatatgacattagtg 11165742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13772579 - 13772545
Alignment:
Q  229 agtaatgtcttggatcaaaatatggggcgttacac 263  Q
    ||||||||||||||||||||| |||||||||||||    
T  13772579 agtaatgtcttggatcaaaatctggggcgttacac 13772545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 31875823 - 31875863
Alignment:
Q  222 atttttaagtaatgtcttggatcaaaatatggggcgttaca 262  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  31875823 atttttaagtaatgtcttggatcaaaatccgaggcgttaca 31875863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 24276217 - 24276467
Alignment:
Q  14 agatgaaatatgagcttgttgtgtgattgaagcgtactcgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 113  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24276217 agataaaatatgagcttgatgtgtgattgaagcgtactcgggggcaaattgggtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 24276316  T
Q  114 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatatttttaaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24276317 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatatttttaaa 24276416  T
Q  214 gaaaca--taatttttaagtaatgtcttggatcaaaatatggggcgttaca 262  Q
    |||| |  ||||||||||||||||||||||||||||||  |||||||||||    
T  24276417 gaaatatttaatttttaagtaatgtcttggatcaaaattcggggcgttaca 24276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 16111355 - 16111419
Alignment:
Q  145 ggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatatttt 209  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||||||  ||||| |||||    
T  16111355 ggagtaattttctattgatttattttttaaagttcatctttctattagtttcgttcaaacatttt 16111419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 16111241 - 16111327
Alignment:
Q  54 ggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||||||||| ||| | ||||| ||||||| | ||||||| ||||| ||||| ||||||||||||| ||| |||| || |||||||||    
T  16111241 ggggcaaattgggttat-caatgaaaaagaa-actaatttttattaatttgtaattgtaacttttaacatatttttaaactctattatt 16111327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 263
Target Start/End: Complemental strand, 2097 - 1844
Alignment:
Q  14 agatgaaatatgagcttgttgtgtgattgaagcgtactcgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 113  Q
    ||||||| |||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2097 agatgaagtatgagctggatgtgtgattgaagcgtactctggggcaaattgggtttttcaatgtaaaagaagattaattttcattaagtcgtatttgtaa 1998  T
Q  114 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttat--ttttaacagtttatctttctattagtttcactcaaatattttta 211  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  1997 cttttaaaatacttttgaattcttgtattaaggagtaattttctattgatttatttttttaacagtttatctttctattagtttcacttaaatattttta 1898  T
Q  212 aagaa--acataatttttaagtaatgtcttggatcaaaatatggggcgttacac 263  Q
    |||||  | ||||||||||||||||||||||||| |||||  ||||||||||||    
T  1897 aagaaatatataatttttaagtaatgtcttggatgaaaatccggggcgttacac 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 8e-95; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 5704747 - 5704997
Alignment:
Q  14 agatgaaatatgagcttgttgtgtgattgaagcgtactcgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaa 113  Q
    |||| ||||||||||||| |||||||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  5704747 agataaaatatgagcttgatgtgtgattgaagcatactcgtgggcaaattggatttttcaatgtaaaagaagattaattttcattaagttgtatttataa 5704846  T
Q  114 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaata--ttttta 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  5704847 cttttaaaatacttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatatttttttt 5704946  T
Q  212 aagaaacataatttttaagtaatgtcttggatcaaaatatggggcgttaca 262  Q
     | | | |||||||| ||||||||||||||||||||||  ||| |||||||    
T  5704947 taaatatataattttaaagtaatgtcttggatcaaaatccgggacgttaca 5704997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 16972784 - 16972866
Alignment:
Q  59 aaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    |||||| | ||||||||| ||||||| ||||||||| ||||| ||||| || |||||||||||||| ||||| | |||||||||    
T  16972784 aaattggggttttcaatg-aaaagaatattaatttttattaatttgtaattataacttttaaaatatttttgtactctattatt 16972866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 46403757 - 46403725
Alignment:
Q  230 gtaatgtcttggatcaaaatatggggcgttaca 262  Q
    |||||||||||||||||||| ||||||||||||    
T  46403757 gtaatgtcttggatcaaaatctggggcgttaca 46403725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 16163641 - 16163505
Alignment:
Q  59 aaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattattaaggagtaattttcta 158  Q
    |||||| | ||||||||| ||||||||| || |||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  16163641 aaattggggttttcaatgaaaaagaagactagttttcattaatttgtatttgtaa-ttttaaaatatttttgaactctattattaaggagtaattttcta 16163543  T
Q  159 ttgatttatttttaacagtttatctttctattagtttc 196  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  16163542 ttgatttatttttaatagtttatctttctattagtttc 16163505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 16167711 - 16167579
Alignment:
Q  69 tttcaatgtaaaagaagattaattttcattaagtt-----gtatttgtaacttttaaaatacttttgaattctattattaaggagtaattttctattgat 163  Q
    |||||||| ||||||||| || |||||||||| ||     |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  16167711 tttcaatgaaaaagaagactagttttcattaatttaatttgtatttgtaa-ttttaaaatatttttgaactctattattaaggagtaattttctattgat 16167613  T
Q  164 ttatttttaacagtttatctttctattagtttca 197  Q
    ||||||||||||||||||||||||||||||||||    
T  16167612 ttatttttaacagtttatctttctattagtttca 16167579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 10276918 - 10277009
Alignment:
Q  52 cgggggcaaattgcgtttttcaatgtaaaagaaga-ttaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||||||||||| ||||||||||| ||||||||| ||  |||||||||| ||||| | ||||||||||||||| ||||||| |||||||||    
T  10276918 cgggggcaaattgagtttttcaatgaaaaagaagacttgtttttcattaatttgtaatagtaacttttaaaatagttttgaactctattatt 10277009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 90144 - 90199
Alignment:
Q  141 ttaaggagtaattttctattgatttatttttaacagtttatctttctattagtttc 196  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  90144 ttaaggagtaattttctattgatttatttttaatagtttatctttctattagtttc 90199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 199889 - 199849
Alignment:
Q  224 ttttaagtaatgtcttggatcaaaatatggggcgttacact 264  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  199889 ttttaagtaatgtcttggaccaaaatctggggcgttacact 199849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 90029 - 90119
Alignment:
Q  54 ggggcaaattgcgtttttcaatgtaaaagaagattaa--ttttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    |||||| |||| ||||||||||| ||| ||||| ||   ||||| ||||  |||| ||||||||||||||||| ||||||| |||||||||    
T  90029 ggggcagattgggtttttcaatgaaaatgaagactatagttttctttaaaatgtaattgtaacttttaaaatatttttgaactctattatt 90119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 24883564 - 24883667
Alignment:
Q  146 gagtaattttctattgatttatttttaacagtttatctttctattagtttcactcaaatatttttaaagaaa-cataatttttaagtaatgtcttggatc 244  Q
    ||||||||||||||| ||||||||| || |||||||||||| |||||||||  |||||||||||||||||||  |  |||||||| ||| |||||||||     
T  24883564 gagtaattttctattaatttatttt-aatagtttatctttccattagtttcgttcaaatatttttaaagaaatgaatatttttaattaacgtcttggatg 24883662  T
Q  245 aaaat 249  Q
    |||||    
T  24883663 aaaat 24883667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 11676426 - 11676370
Alignment:
Q  86 attaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||||||||||||| ||||| |||||||||| |||||| ||||||| |||||||||    
T  11676426 attaattttcattaatttgtaattgtaactttaaaaatatttttgaactctattatt 11676370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 24883449 - 24883532
Alignment:
Q  59 aaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    |||||| ||||||||||| ||||| |||||| |||| ||||  ||||| |||||| |||||||||| | ||||| |||||||||    
T  24883449 aaattgggtttttcaatgaaaaaggagattagtttttattattttgtaattgtaatttttaaaatattcttgaactctattatt 24883532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 11676345 - 11676292
Alignment:
Q  141 ttaaggagtaattttctattgatttatttttaacagtttatctttctattagttt 195  Q
    |||| ||||||||||| ||| ||||||||| || |||||||||||||||||||||    
T  11676345 ttaaagagtaattttccattaatttatttt-aatagtttatctttctattagttt 11676292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 21490646 - 21490613
Alignment:
Q  230 gtaatgtcttggatcaaaatatggggcgttacac 263  Q
    |||||||||||||||||||| |||||||||||||    
T  21490646 gtaatgtcttggatcaaaatctggggcgttacac 21490613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 11680 - 11735
Alignment:
Q  141 ttaaggagtaattttctattgatttatttttaacagtttatctttctattagtttc 196  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  11680 ttaaggagtaattttttattgatttatttttaatagtttgtctttctattagtttc 11735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 11568 - 11656
Alignment:
Q  54 ggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||||||||| ||||||||||| ||| ||||| || ||||| ||||  |||| ||||||||| ||||||| ||||||| |||| ||||    
T  11568 ggggcaaattgggtttttcaatgaaaatgaagactagttttctttaaaatgtaattgtaacttgtaaaatatttttgaactctagtatt 11656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 11387890 - 11387958
Alignment:
Q  126 ttttgaattctattattaaggagtaattttctattgatttatttttaacagtttatctttctattagttt 195  Q
    |||| |||||||||||||| ||||||| |||||||||||| ||||||| | |||||||||||||||||||    
T  11387890 ttttaaattctattattaatgagtaatcttctattgattt-tttttaatattttatctttctattagttt 11387958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 23827724 - 23827635
Alignment:
Q  54 ggggcaaattgcgtttttcaatgtaaaagaaga-ttaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||||||||| ||||||||||| ||||||||| ||  |||||||||| | ||| | ||||||||||||||| ||||||| |||||||||    
T  23827724 ggggcaaattgggtttttcaatgaaaaagaagacttgtttttcattaattagtaatagtaacttttaaaatagttttgaactctattatt 23827635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 356299 - 356210
Alignment:
Q  52 cgggggcaaattgcgtttttcaatgtaaaagaagattaattttcattaagttgtatttgtaacttttaaaatacttttgaattctattatt 142  Q
    ||||| ||||||| ||||||||||| ||||||| |||| | || ||||| ||||| |||||||||||||||||  |||||| |||||||||    
T  356299 cggggtcaaattgggtttttcaatgaaaaagaaaattagtctt-attaatttgtaattgtaacttttaaaatatatttgaactctattatt 356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 4233100 - 4233140
Alignment:
Q  222 atttttaagtaatgtcttggatcaaaatatggggcgttaca 262  Q
    |||||||||||||||||||||| |||||  |||||||||||    
T  4233100 atttttaagtaatgtcttggatgaaaatccggggcgttaca 4233140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University