View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15548_high_2 (Length: 291)
Name: NF15548_high_2
Description: NF15548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15548_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 23 - 273
Target Start/End: Original strand, 43036922 - 43037172
Alignment:
| Q |
23 |
tgtacgaaaatgaaatattggtggtgtgtggtgagtgccagttttcatggttcattcattcaattgaacagaaaaaggaaagaaaacaacagaaagtgat |
122 |
Q |
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| T |
43036922 |
tgtacgaaaatgaaatattggtggtgtgtggtcagtgccagttttcatggttcattcattcaattgaacagaaaaaggaaagaaaacaacagaaagtgat |
43037021 |
T |
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| Q |
123 |
gatgtctgccaacgaggaaagaaacatgaaaatgaaataatttagttgaaggaggatctcccacccaccaataattttgcaaaatatccaaacacaaata |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43037022 |
gatgtctgccaacgaggaaagaaacatgaaaatgaaataatttagttgaaggaggacctcccacccaccaataattttgcaaaatatccaaacacaaata |
43037121 |
T |
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| Q |
223 |
cagtagatactttcatttcatgcagtcatggtattttaatcagatggtata |
273 |
Q |
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| T |
43037122 |
cagtagatactttcatttcatgcagtcatggtattttaatcagatggtata |
43037172 |
T |
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