View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1554_low_5 (Length: 299)
Name: NF1554_low_5
Description: NF1554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1554_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 11612520 - 11612380
Alignment:
| Q |
135 |
ggtaagaactttggtgaattaagtgaaaagcagtaaaagatatttcacacctcaaagcatagtaaagcataagaaataaagagatagtgctatgaatcaa |
234 |
Q |
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| T |
11612520 |
ggtaagaactttggtgaattaagtgaaaagcagtaaaagatatttcacacctcaaagcatagtaaagcataagaaataaagagatagtgctatgaatcaa |
11612421 |
T |
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| Q |
235 |
tagggacacatgaaaaaagagaagagagtactaacatatga |
275 |
Q |
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| T |
11612420 |
tagtgacacatgaaaaaagagaagagagtactaacatatga |
11612380 |
T |
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