View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15551_low_12 (Length: 358)
Name: NF15551_low_12
Description: NF15551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15551_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 343
Target Start/End: Original strand, 30888394 - 30888716
Alignment:
| Q |
19 |
atgaaacaagttaactaaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatag |
118 |
Q |
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| T |
30888394 |
atgaaacaagttaactaaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatag |
30888493 |
T |
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| Q |
119 |
ttctaagtgttttgtttgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattaaccaagaacaatcatgaggg |
218 |
Q |
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| T |
30888494 |
ttctaagtgttttgtttgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattagccaagaacaatcatgaggg |
30888593 |
T |
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| Q |
219 |
aaattgttatgattgcaactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgcgcgctcatgtatatttta |
318 |
Q |
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| T |
30888594 |
aaattgttatgattgcaactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgt--gcgctcgtgtgtatttta |
30888691 |
T |
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| Q |
319 |
ttatgacatctattctattgtttat |
343 |
Q |
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| T |
30888692 |
ttatggcatctcttctattgtttat |
30888716 |
T |
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