View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15551_low_24 (Length: 254)
Name: NF15551_low_24
Description: NF15551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15551_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 51676797 - 51677028
Alignment:
| Q |
16 |
acacacacaaagattaaaaatgaaaagtgtggtaaattaattaatcaatgaagtgttgataaagttcctttggtttttctcttgtcttttgttatttgca |
115 |
Q |
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| T |
51676797 |
acacacacaaagattaaaaatgaaaagtgtggtaaattaattattcaatgaagtgttgataaagttcctttggtttttctcttgtcttttgttatttgca |
51676896 |
T |
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| Q |
116 |
tgtcgtaatagtttgctctgtgcgggccgtggtaataactgtatgccattgcctgcagtttaagatttgtccctattatatgatatatgcaacttgtagt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51676897 |
tgtcgtaatagtttgctctgtgcgggccgtggtaataactgtatgccattgcctgcagtttaagatttgtccctattatatgatatatgcaacttgtagt |
51676996 |
T |
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| Q |
216 |
ttctgaggaggctcaataaacgagatactcct |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
51676997 |
ttctgaggaggctcaataaacgagatactcct |
51677028 |
T |
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