View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15551_low_7 (Length: 399)
Name: NF15551_low_7
Description: NF15551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15551_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 386
Target Start/End: Complemental strand, 9139979 - 9139612
Alignment:
| Q |
19 |
acaaggctaattatgtaatcttccttatttttaatcaattaccacatagaccagtgtccttcttagatggtctaaaatttaaagcattaagactatatat |
118 |
Q |
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| T |
9139979 |
acaaggctaattatataatcttccttattttttatcaattaccacatagaccagtgtccttcttagatggtctaaaatttaaagcattaagactatatat |
9139880 |
T |
|
| Q |
119 |
gcatagattggttttccttgctttgactgatatgacattagcagtgcttttgtatccaggaacattgcaagcagtggttgaactccctattaaatttgct |
218 |
Q |
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| T |
9139879 |
gcatagatttgttttccttgctttgactgatatcacattagcagtgcttttgtatccaggaacattgcaagcagtggttgaactccctattaaatttgct |
9139780 |
T |
|
| Q |
219 |
tggcaagaagacatcacttcagttccttcagcacatctcactccatcaactgatggtacttcaattctgtacattccatatttatttgttgttctgttca |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
9139779 |
tggcaagaagacatcacttcagttccttcagcacatctcactccatcaactgatggtacttcaattctgtacattccatacttatttgttgttctgttca |
9139680 |
T |
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| Q |
319 |
ctgacagtgtaatctgctctgtggttttggctgaaattgctttgaacatgcagtctactttcatctca |
386 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |
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| T |
9139679 |
ctgacagtgtaatctgctctgttgttttggctgaaattgctttgaacatgcaatctactttcacctca |
9139612 |
T |
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