View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15552_low_2 (Length: 369)
Name: NF15552_low_2
Description: NF15552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15552_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 13 - 354
Target Start/End: Original strand, 40215950 - 40216291
Alignment:
| Q |
13 |
tgaaccctgaatctctttctcaaa-ctctttcgggcgttctagctcaaccacttgagctacggc---tgctacactttgaaaactgttaataaaattaaa |
108 |
Q |
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| T |
40215950 |
tgaaccctgaatctctttctcaaaactctttcgggcgttctagctcaaccacttgagctacggcggctgctacactttgaaaactgttaataaaattaaa |
40216049 |
T |
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| Q |
109 |
tatacacatatatagcagtccttgttgtctaaaaatgagttagagacaaaagaatataatgtctataatattaacatatctaatccttgatttttagcag |
208 |
Q |
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| T |
40216050 |
tatacacata----gcagtccttgttgtctaaaaatgagttagagacaaaagaatataatgtctataattttaacatatctaatccttgatttttagcag |
40216145 |
T |
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| Q |
209 |
tgagaaatatttgctattttttagtacatttagttatttaactaattgcttattgtgtccagaatggagaagataaaaataagaagtgtacatagtcaag |
308 |
Q |
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| T |
40216146 |
tgagaaatatttgctattttttagtacatttagttatttaactaattgcttattgtgtccagaatggagaagataaaaatgagaagtgtacatagtcaag |
40216245 |
T |
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| Q |
309 |
caaagattgttgggacaatagccactgttgcaggtgccatggttat |
354 |
Q |
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| T |
40216246 |
caaagattgttgggacaatagccactgttgcaggtgccatggttat |
40216291 |
T |
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