View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15554_high_25 (Length: 339)
Name: NF15554_high_25
Description: NF15554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15554_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 19 - 328
Target Start/End: Original strand, 45954663 - 45954978
Alignment:
| Q |
19 |
cataccttggaagaaaaatcagcaaagtcagtgtctgattcacctggcaattgttgagtgataggtgcttttcctcttgtaaataaagttacctaccaaa |
118 |
Q |
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| T |
45954663 |
cataccttggaagaaaaatcagcaaagtcagtgtctgattcacctggcaattgttgagtgataggtgcttttcctcttgtgaataaagttacctaccaaa |
45954762 |
T |
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| Q |
119 |
tttacaagttattttcctaaaccttaattcaaaaatatattatttccggttagagtcaaataatgagtaataat------atatatacctggtggccttc |
212 |
Q |
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| T |
45954763 |
tttacaagttattttcctaaaccttaattcaaaaatatattatttccggttagagtcaaataatgagtaataataaaatcatatatacctggtggccttc |
45954862 |
T |
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| Q |
213 |
tttgacaagttgccttgacaaaaacacaccaatgaatctagtacctcccattatgaggattttcttggtgcttgatgccgagacaattaaagaacctttt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
45954863 |
tttgacaagttgccttgacaaaaacacaccaatgaatctagtacctcccattatgaggattttcttggtgcttgatgctgagacaattaaagaacctttt |
45954962 |
T |
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| Q |
313 |
ggctgccatgtttttc |
328 |
Q |
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|||||||||||||||| |
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| T |
45954963 |
ggctgccatgtttttc |
45954978 |
T |
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