View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15554_high_30 (Length: 314)
Name: NF15554_high_30
Description: NF15554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15554_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 93 - 297
Target Start/End: Complemental strand, 25144813 - 25144607
Alignment:
| Q |
93 |
aaaaaagagaaggataatgcaattataaataagtttgacaaatcatatttgttagtccaagtatcaaagagcttagttttaaatttttctcaagtcaagt |
192 |
Q |
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| T |
25144813 |
aaaaaagagaaggataatgcaattataaataagtttgacaaatcaaatt-gttagtccaagtatcaaagagcttagttttaaatttttctcaagtcaagt |
25144715 |
T |
|
| Q |
193 |
tgaagggtcatgcattcacgctttcatgaattttgattgttgaata---aaaatcacacaacctacatatcaagttgtgttttaaaatagatttggtgac |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25144714 |
tgaagggtcatgcattcacgctttcatgaattttgatttttgaataaaaaaaatcacacaacctacatatcaagttgtgttttaaaatagatttggtgac |
25144615 |
T |
|
| Q |
290 |
gtcataat |
297 |
Q |
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|||||||| |
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| T |
25144614 |
gtcataat |
25144607 |
T |
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