View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15554_high_36 (Length: 276)
Name: NF15554_high_36
Description: NF15554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15554_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 45954671 - 45954412
Alignment:
| Q |
1 |
caaggtatgctaattgtaaatgtaaacatcaaagctggatcattcactatttttgtaatgtaatgtaatttatttttatttcatagatcttgcatttgaa |
100 |
Q |
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| T |
45954671 |
caaggtatgttaattgtaaatgtaaacatcaaagctgtttcattcactatttttgtaatgtaatgtaacttatttttatttcatagatcttgcatttgaa |
45954572 |
T |
|
| Q |
101 |
aggagacaggaaagactatgattttgtaaaatctagtctctcagcagaaggatttgatgttgtttatgacattaatggtatttagattcttaactttcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45954571 |
aggagacaggaaagactatgattttgtaaaatctagtctctcagcagaaggatttgatgttgtttatgacattaatggtatttagattcttaactttcac |
45954472 |
T |
|
| Q |
201 |
accttctgtgctgaataccatttcttactattcatattaagaattgtgatttttcatgat |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45954471 |
accttctgtgctgaataccatttcttactattcatattaagaattgtgatttttcatgat |
45954412 |
T |
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