View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15554_high_37 (Length: 258)

Name: NF15554_high_37
Description: NF15554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15554_high_37
NF15554_high_37
[»] chr1 (70 HSPs)
chr1 (14-239)||(29242519-29242744)
chr1 (14-239)||(21987854-21988081)
chr1 (14-239)||(18736112-18736339)
chr1 (28-239)||(21449089-21449301)
chr1 (27-238)||(17610130-17610354)
chr1 (27-239)||(12208601-12208826)
chr1 (26-236)||(9401511-9401731)
chr1 (14-222)||(16916806-16917016)
chr1 (27-239)||(15543841-15544065)
chr1 (38-239)||(25405516-25405729)
chr1 (26-239)||(16069435-16069649)
chr1 (38-236)||(16179010-16179220)
chr1 (26-239)||(17359162-17359387)
chr1 (26-239)||(18825656-18825869)
chr1 (25-219)||(21666481-21666687)
chr1 (25-217)||(727489-727682)
chr1 (28-239)||(18830482-18830693)
chr1 (53-239)||(14779565-14779764)
chr1 (141-239)||(13345337-13345435)
chr1 (26-237)||(31235922-31236145)
chr1 (26-238)||(22622892-22623116)
chr1 (26-217)||(23179819-23180010)
chr1 (29-239)||(22664206-22664429)
chr1 (65-217)||(24054001-24054153)
chr1 (26-217)||(14781739-14781930)
chr1 (141-239)||(17837517-17837615)
chr1 (119-239)||(21334698-21334818)
chr1 (140-239)||(23038012-23038110)
chr1 (141-239)||(3591654-3591752)
chr1 (141-239)||(24306307-24306404)
chr1 (147-239)||(21847634-21847725)
chr1 (25-113)||(32382881-32382968)
chr1 (147-234)||(51473883-51473968)
chr1 (157-239)||(9787896-9787978)
chr1 (27-113)||(18100888-18100973)
chr1 (139-239)||(22620262-22620362)
chr1 (138-229)||(16787724-16787815)
chr1 (30-113)||(28008244-28008326)
chr1 (28-235)||(33190681-33190900)
chr1 (27-113)||(15807895-15807980)
chr1 (120-239)||(24281277-24281393)
chr1 (40-110)||(18529079-18529149)
chr1 (142-239)||(27117720-27117817)
chr1 (183-239)||(26540896-26540951)
chr1 (27-239)||(12012688-12012899)
chr1 (140-239)||(15813155-15813253)
chr1 (30-113)||(17121378-17121460)
chr1 (148-238)||(26648979-26649068)
chr1 (139-239)||(32383008-32383097)
chr1 (17-113)||(9787743-9787839)
chr1 (141-238)||(24267783-24267880)
chr1 (14-97)||(25403951-25404036)
chr1 (139-238)||(15813523-15813623)
chr1 (121-238)||(147632-147746)
chr1 (160-222)||(44795386-44795447)
chr1 (181-238)||(17121521-17121577)
chr1 (120-223)||(24214560-24214660)
chr1 (27-72)||(25961040-25961085)
chr1 (141-234)||(34480974-34481067)
chr1 (57-113)||(16360010-16360065)
chr1 (26-107)||(22620407-22620488)
chr1 (31-113)||(34481108-34481189)
chr1 (27-80)||(15813417-15813470)
chr1 (150-239)||(16359871-16359959)
chr1 (27-107)||(21334592-21334672)
chr1 (27-80)||(24214709-24214762)
chr1 (27-111)||(21973079-21973164)
chr1 (141-213)||(24306957-24307028)
chr1 (56-113)||(51473780-51473836)
chr1 (54-113)||(15813057-15813116)
[»] chr7 (114 HSPs)
chr7 (29-239)||(13418534-13418744)
chr7 (14-216)||(11803103-11803307)
chr7 (42-234)||(17077133-17077325)
chr7 (17-239)||(1848092-1848324)
chr7 (26-217)||(4449002-4449193)
chr7 (14-239)||(8053923-8054157)
chr7 (18-217)||(13277525-13277726)
chr7 (17-239)||(18368843-18369079)
chr7 (17-239)||(2563818-2564053)
chr7 (28-239)||(20582259-20582479)
chr7 (30-228)||(39273053-39273263)
chr7 (26-237)||(8978879-8979103)
chr7 (26-217)||(16058906-16059099)
chr7 (26-219)||(8877441-8877647)
chr7 (119-239)||(8054468-8054588)
chr7 (38-237)||(3329542-3329755)
chr7 (27-239)||(5108566-5108790)
chr7 (26-238)||(6042462-6042676)
chr7 (116-237)||(13759835-13759957)
chr7 (30-237)||(3734598-3734817)
chr7 (25-239)||(10586896-10587123)
chr7 (27-240)||(18662440-18662664)
chr7 (141-239)||(9864327-9864425)
chr7 (122-237)||(16365707-16365820)
chr7 (36-222)||(17191097-17191284)
chr7 (120-239)||(7318273-7318389)
chr7 (154-239)||(23099966-23100051)
chr7 (139-239)||(9731626-9731726)
chr7 (27-237)||(17153028-17153251)
chr7 (141-239)||(18449242-18449340)
chr7 (139-240)||(11221163-11221264)
chr7 (141-235)||(5530025-5530119)
chr7 (120-239)||(4785837-4785952)
chr7 (120-239)||(4818837-4818952)
chr7 (120-239)||(9574407-9574523)
chr7 (155-239)||(31492930-31493014)
chr7 (141-239)||(4579098-4579195)
chr7 (141-238)||(18495374-18495471)
chr7 (41-216)||(22067128-22067302)
chr7 (125-239)||(1584545-1584654)
chr7 (139-239)||(2350746-2350846)
chr7 (140-239)||(16297820-16297919)
chr7 (27-113)||(9131049-9131135)
chr7 (141-239)||(10937602-10937700)
chr7 (122-239)||(12329682-12329797)
chr7 (138-228)||(17203035-17203124)
chr7 (28-113)||(140255-140339)
chr7 (157-222)||(8313412-8313477)
chr7 (141-238)||(10584487-10584584)
chr7 (120-238)||(4986556-4986671)
chr7 (120-238)||(4990654-4990769)
chr7 (28-217)||(13289294-13289485)
chr7 (184-239)||(15869595-15869650)
chr7 (31-109)||(8293920-8293997)
chr7 (141-239)||(9500444-9500542)
chr7 (141-239)||(21230312-21230410)
chr7 (139-236)||(7492262-7492358)
chr7 (125-239)||(12181608-12181720)
chr7 (28-107)||(4785985-4786064)
chr7 (26-113)||(7397280-7397367)
chr7 (140-239)||(1587681-1587780)
chr7 (141-232)||(18466012-18466103)
chr7 (27-113)||(8313267-8313352)
chr7 (169-239)||(9866570-9866639)
chr7 (141-239)||(14195974-14196071)
chr7 (141-239)||(21912481-21912579)
chr7 (120-215)||(3191042-3191134)
chr7 (140-229)||(10648588-10648677)
chr7 (183-240)||(18661589-18661646)
chr7 (183-239)||(5797511-5797567)
chr7 (141-237)||(6005839-6005934)
chr7 (50-113)||(7492160-7492223)
chr7 (27-113)||(1587821-1587904)
chr7 (39-106)||(6006084-6006150)
chr7 (140-239)||(6013593-6013692)
chr7 (156-239)||(9916566-9916649)
chr7 (156-239)||(9924478-9924561)
chr7 (183-238)||(26134791-26134845)
chr7 (141-239)||(9245181-9245279)
chr7 (27-113)||(9574546-9574631)
chr7 (27-113)||(14195847-14195932)
chr7 (27-109)||(17829712-17829793)
chr7 (167-221)||(21102320-21102374)
chr7 (141-234)||(22339312-22339408)
chr7 (26-102)||(5797659-5797735)
chr7 (168-237)||(7397198-7397266)
chr7 (155-232)||(9261211-9261288)
chr7 (157-238)||(14755147-14755228)
chr7 (30-110)||(16365847-16365927)
chr7 (155-216)||(18467474-18467535)
chr7 (185-234)||(21227184-21227233)
chr7 (167-239)||(12391185-12391257)
chr7 (36-112)||(31493066-31493141)
chr7 (140-239)||(1872785-1872884)
chr7 (167-238)||(4258913-4258983)
chr7 (185-240)||(9890182-9890237)
chr7 (43-113)||(16297724-16297794)
chr7 (140-239)||(19153298-19153395)
chr7 (140-239)||(20752697-20752794)
chr7 (201-239)||(1814115-1814153)
chr7 (63-113)||(10648717-10648766)
chr7 (185-239)||(23093310-23093363)
chr7 (53-110)||(2350647-2350703)
chr7 (80-113)||(7318412-7318445)
chr7 (185-238)||(15303666-15303718)
chr7 (185-222)||(16306711-16306748)
chr7 (187-239)||(5047434-5047485)
chr7 (42-113)||(9731516-9731587)
chr7 (54-113)||(19153434-19153493)
chr7 (54-113)||(20752833-20752892)
chr7 (155-239)||(9130906-9130991)
chr7 (200-239)||(9720964-9721003)
chr7 (27-113)||(15869734-15869819)
chr7 (189-239)||(33035473-33035522)
[»] chr8 (53 HSPs)
chr8 (17-237)||(17101769-17101990)
chr8 (27-239)||(24114158-24114381)
chr8 (36-239)||(29382244-29382460)
chr8 (33-216)||(27659468-27659653)
chr8 (27-239)||(24269598-24269821)
chr8 (28-237)||(18448417-18448639)
chr8 (28-217)||(23893089-23893278)
chr8 (27-238)||(25226137-25226360)
chr8 (26-237)||(13314865-13315089)
chr8 (26-199)||(16403952-16404126)
chr8 (30-198)||(18569107-18569276)
chr8 (53-219)||(17509266-17509443)
chr8 (14-217)||(19264064-19264270)
chr8 (27-239)||(34497115-34497340)
chr8 (140-239)||(14528149-14528248)
chr8 (141-239)||(24904633-24904731)
chr8 (27-239)||(24110544-24110754)
chr8 (140-234)||(2637603-2637697)
chr8 (141-238)||(5850942-5851039)
chr8 (142-239)||(15238799-15238896)
chr8 (120-238)||(19786732-19786847)
chr8 (27-98)||(26394573-26394644)
chr8 (148-237)||(31288360-31288448)
chr8 (27-238)||(25182302-25182526)
chr8 (141-233)||(44011025-44011116)
chr8 (183-234)||(30783784-30783835)
chr8 (27-113)||(7983720-7983805)
chr8 (141-239)||(17976619-17976717)
chr8 (139-221)||(21314641-21314723)
chr8 (120-239)||(30806475-30806596)
chr8 (141-234)||(14075599-14075692)
chr8 (140-239)||(6884958-6885056)
chr8 (172-239)||(26008023-26008090)
chr8 (27-113)||(13697994-13698078)
chr8 (141-239)||(24644838-24644935)
chr8 (141-239)||(30122156-30122253)
chr8 (45-113)||(14528288-14528355)
chr8 (120-239)||(13697862-13697971)
chr8 (160-239)||(28276778-28276856)
chr8 (31-113)||(30122033-30122114)
chr8 (27-112)||(9642018-9642102)
chr8 (183-239)||(5052964-5053020)
chr8 (26-113)||(44010897-44010984)
chr8 (172-239)||(17969414-17969481)
chr8 (167-238)||(26615269-26615339)
chr8 (37-114)||(14626166-14626244)
chr8 (197-239)||(30235377-30235419)
chr8 (183-219)||(24723484-24723520)
chr8 (27-113)||(21314761-21314848)
chr8 (183-238)||(24119812-24119866)
chr8 (80-113)||(19786870-19786903)
chr8 (190-222)||(14006112-14006144)
chr8 (46-86)||(14656994-14657034)
[»] chr4 (74 HSPs)
chr4 (27-240)||(13908853-13909079)
chr4 (27-238)||(19492586-19492798)
chr4 (17-239)||(13692544-13692768)
chr4 (17-240)||(17709756-17709989)
chr4 (27-238)||(15164768-15164990)
chr4 (40-239)||(17216817-17217031)
chr4 (26-237)||(7582299-7582523)
chr4 (34-239)||(17672002-17672219)
chr4 (48-239)||(13128768-13128973)
chr4 (70-235)||(16730318-16730494)
chr4 (120-237)||(11490534-11490648)
chr4 (25-202)||(17026216-17026394)
chr4 (26-217)||(25094589-25094780)
chr4 (27-221)||(17337009-17337216)
chr4 (138-239)||(21323873-21323974)
chr4 (147-237)||(13992883-13992973)
chr4 (141-239)||(19882640-19882738)
chr4 (141-239)||(20315000-20315098)
chr4 (29-217)||(25097856-25098044)
chr4 (120-239)||(12578249-12578365)
chr4 (120-239)||(14648895-14649010)
chr4 (150-239)||(22175972-22176061)
chr4 (27-239)||(19092295-19092519)
chr4 (26-240)||(19562048-19562278)
chr4 (45-238)||(17951189-17951394)
chr4 (120-238)||(5679206-5679321)
chr4 (141-237)||(25121227-25121322)
chr4 (28-106)||(24639336-24639415)
chr4 (48-238)||(17955044-17955246)
chr4 (27-113)||(25121101-25121186)
chr4 (140-238)||(8969722-8969819)
chr4 (27-113)||(26115780-26115865)
chr4 (141-238)||(11700571-11700667)
chr4 (140-237)||(19636586-19636682)
chr4 (148-239)||(9737512-9737608)
chr4 (26-170)||(12406576-12406720)
chr4 (139-239)||(40227777-40227875)
chr4 (140-239)||(11933419-11933517)
chr4 (164-239)||(19929699-19929774)
chr4 (155-237)||(19374828-19374909)
chr4 (155-221)||(24639469-24639535)
chr4 (141-237)||(11521192-11521288)
chr4 (26-106)||(12761390-12761469)
chr4 (157-237)||(15047130-15047210)
chr4 (157-237)||(15107214-15107294)
chr4 (140-239)||(9052674-9052772)
chr4 (140-239)||(20829739-20829837)
chr4 (59-113)||(9264912-9264966)
chr4 (169-239)||(19900580-19900649)
chr4 (153-238)||(26115917-26116001)
chr4 (149-237)||(11093966-11094054)
chr4 (63-110)||(12578177-12578223)
chr4 (167-234)||(22526369-22526436)
chr4 (17-110)||(14649036-14649129)
chr4 (29-113)||(5679344-5679427)
chr4 (181-234)||(22218642-22218694)
chr4 (142-239)||(3774825-3774923)
chr4 (191-239)||(12318433-12318481)
chr4 (120-237)||(22357515-22357632)
chr4 (141-237)||(23080343-23080439)
chr4 (27-110)||(40227917-40228000)
chr4 (159-222)||(17275833-17275896)
chr4 (34-113)||(19374694-19374772)
chr4 (63-110)||(21323787-21323833)
chr4 (169-239)||(10107011-10107080)
chr4 (164-233)||(43941811-43941880)
chr4 (200-239)||(13587231-13587270)
chr4 (195-229)||(1833648-1833682)
chr4 (183-237)||(12839823-12839877)
chr4 (186-240)||(20317824-20317877)
chr4 (31-80)||(23644945-23644995)
chr4 (183-237)||(40215361-40215414)
chr4 (30-99)||(11700452-11700520)
chr4 (169-221)||(10589730-10589781)
[»] scaffold0056 (2 HSPs)
scaffold0056 (28-240)||(21276-21488)
scaffold0056 (26-239)||(24987-25200)
[»] chr6 (81 HSPs)
chr6 (17-238)||(25781796-25782013)
chr6 (29-239)||(27737565-27737788)
chr6 (28-237)||(23844340-23844562)
chr6 (17-239)||(21841563-21841787)
chr6 (26-217)||(24657342-24657532)
chr6 (39-238)||(9516786-9516998)
chr6 (26-203)||(11135943-11136123)
chr6 (19-237)||(27124361-27124589)
chr6 (30-239)||(5624640-5624862)
chr6 (37-217)||(22813605-22813786)
chr6 (27-223)||(23231859-23232066)
chr6 (31-217)||(22412940-22413126)
chr6 (26-217)||(23009281-23009471)
chr6 (26-217)||(23778893-23779083)
chr6 (29-234)||(23645644-23645861)
chr6 (141-239)||(9726022-9726120)
chr6 (27-239)||(12183205-12183430)
chr6 (122-239)||(23143722-23143838)
chr6 (145-237)||(17729154-17729246)
chr6 (17-239)||(17826960-17827191)
chr6 (120-238)||(4339736-4339851)
chr6 (122-223)||(22410311-22410410)
chr6 (141-234)||(17299832-17299925)
chr6 (27-239)||(21672309-21672534)
chr6 (120-239)||(21907432-21907548)
chr6 (148-239)||(15466370-15466460)
chr6 (30-237)||(24475053-24475277)
chr6 (27-237)||(28933535-28933757)
chr6 (149-239)||(2586721-2586810)
chr6 (27-239)||(21679725-21679950)
chr6 (140-237)||(21688795-21688892)
chr6 (120-239)||(22567840-22567956)
chr6 (142-239)||(25927305-25927402)
chr6 (157-223)||(19244601-19244667)
chr6 (142-239)||(7542962-7543059)
chr6 (156-237)||(18075404-18075485)
chr6 (141-234)||(22566163-22566256)
chr6 (188-239)||(21932100-21932151)
chr6 (17-113)||(20005781-20005879)
chr6 (160-238)||(20005899-20005977)
chr6 (31-113)||(25927184-25927265)
chr6 (120-239)||(11176950-11177066)
chr6 (45-106)||(17382214-17382275)
chr6 (140-238)||(9898958-9899057)
chr6 (186-239)||(20145106-20145159)
chr6 (186-239)||(22187680-22187733)
chr6 (147-240)||(24251515-24251608)
chr6 (183-239)||(8241277-8241333)
chr6 (187-239)||(14079491-14079543)
chr6 (25-109)||(21907577-21907661)
chr6 (135-234)||(17883780-17883878)
chr6 (27-109)||(9838499-9838580)
chr6 (27-113)||(24215615-24215700)
chr6 (140-239)||(8039139-8039230)
chr6 (27-107)||(14637012-14637093)
chr6 (31-114)||(14079336-14079420)
chr6 (26-113)||(20144995-20145083)
chr6 (26-113)||(22187756-22187844)
chr6 (30-104)||(1635110-1635183)
chr6 (120-215)||(9838380-9838472)
chr6 (31-100)||(19244726-19244794)
chr6 (141-238)||(28586031-28586128)
chr6 (150-239)||(28589440-28589529)
chr6 (53-109)||(24252131-24252186)
chr6 (167-238)||(9385956-9386026)
chr6 (168-239)||(17382145-17382216)
chr6 (70-113)||(22410246-22410289)
chr6 (43-113)||(8241414-8241482)
chr6 (54-124)||(9898863-9898931)
chr6 (43-113)||(15466509-15466577)
chr6 (31-81)||(18075289-18075339)
chr6 (183-232)||(34478532-34478580)
chr6 (31-113)||(6630569-6630652)
chr6 (138-198)||(24252227-24252287)
chr6 (167-218)||(26215414-26215464)
chr6 (36-110)||(4339877-4339950)
chr6 (120-223)||(6630675-6630773)
chr6 (198-239)||(20002440-20002481)
chr6 (191-239)||(20722228-20722274)
chr6 (26-113)||(11177089-11177176)
chr6 (201-237)||(34092327-34092363)
[»] chr2 (56 HSPs)
chr2 (27-238)||(30411679-30411892)
chr2 (27-239)||(27908993-27909218)
chr2 (26-234)||(17349362-17349574)
chr2 (27-217)||(25530469-25530660)
chr2 (18-217)||(29142983-29143184)
chr2 (30-239)||(17743354-17743575)
chr2 (36-239)||(25196011-25196226)
chr2 (25-202)||(25920303-25920480)
chr2 (17-217)||(25535296-25535496)
chr2 (26-239)||(29719105-29719330)
chr2 (27-239)||(26603234-26603449)
chr2 (27-237)||(32085465-32085687)
chr2 (26-239)||(28925522-28925747)
chr2 (27-221)||(25618574-25618780)
chr2 (63-239)||(17635685-17635874)
chr2 (45-237)||(31804791-31804997)
chr2 (26-217)||(24090812-24091003)
chr2 (26-239)||(15339238-15339464)
chr2 (43-239)||(17675519-17675729)
chr2 (14-202)||(17197906-17198095)
chr2 (120-237)||(20174618-20174732)
chr2 (140-239)||(25888224-25888319)
chr2 (139-237)||(45621880-45621978)
chr2 (27-113)||(23933420-23933505)
chr2 (139-239)||(12953293-12953393)
chr2 (26-217)||(26667339-26667520)
chr2 (141-240)||(28770444-28770543)
chr2 (27-113)||(45553268-45553352)
chr2 (147-239)||(8503077-8503169)
chr2 (27-114)||(17890075-17890161)
chr2 (148-239)||(23011771-23011861)
chr2 (148-239)||(45553130-45553221)
chr2 (147-233)||(30900851-30900937)
chr2 (139-238)||(11382752-11382851)
chr2 (140-239)||(19200135-19200233)
chr2 (169-239)||(8447079-8447148)
chr2 (140-234)||(25885460-25885553)
chr2 (139-221)||(9774334-9774414)
chr2 (125-238)||(13776340-13776449)
chr2 (27-113)||(25887778-25887864)
chr2 (26-109)||(45621756-45621838)
chr2 (141-239)||(5777217-5777314)
chr2 (148-238)||(17889938-17890027)
chr2 (44-113)||(9774152-9774221)
chr2 (147-236)||(25939161-25939249)
chr2 (140-216)||(27418389-27418465)
chr2 (183-239)||(32440040-32440095)
chr2 (70-113)||(13776476-13776519)
chr2 (183-239)||(12557752-12557807)
chr2 (57-113)||(29027635-29027690)
chr2 (80-113)||(11382680-11382713)
chr2 (28-109)||(20174512-20174591)
chr2 (185-238)||(27869800-27869852)
chr2 (123-201)||(28606164-28606239)
chr2 (155-199)||(21078641-21078685)
chr2 (207-239)||(29883224-29883256)
[»] chr5 (64 HSPs)
chr5 (27-239)||(15375769-15375981)
chr5 (26-238)||(23388723-23388935)
chr5 (36-239)||(24140443-24140651)
chr5 (26-217)||(28664796-28664987)
chr5 (28-239)||(20315305-20315528)
chr5 (17-238)||(24245408-24245642)
chr5 (26-238)||(17431884-17432108)
chr5 (30-217)||(20563969-20564158)
chr5 (28-217)||(20858707-20858896)
chr5 (26-222)||(17314986-17315182)
chr5 (71-239)||(19004146-19004325)
chr5 (27-239)||(34128637-34128860)
chr5 (28-171)||(20744545-20744699)
chr5 (122-239)||(25550487-25550603)
chr5 (26-202)||(20549591-20549766)
chr5 (26-202)||(16523676-16523852)
chr5 (30-238)||(36175135-36175354)
chr5 (30-238)||(39434464-39434676)
chr5 (140-237)||(34487640-34487736)
chr5 (140-239)||(25402337-25402436)
chr5 (140-239)||(18208249-18208347)
chr5 (140-239)||(18937748-18937846)
chr5 (155-238)||(22755522-22755605)
chr5 (140-239)||(24266955-24267053)
chr5 (140-239)||(24343586-24343684)
chr5 (154-239)||(15469936-15470021)
chr5 (148-237)||(17171561-17171650)
chr5 (141-238)||(17185464-17185561)
chr5 (26-113)||(24260655-24260741)
chr5 (138-237)||(26120867-26120965)
chr5 (139-237)||(15690780-15690877)
chr5 (116-237)||(19051551-19051672)
chr5 (141-239)||(24852173-24852271)
chr5 (167-239)||(23380284-23380356)
chr5 (191-237)||(19086230-19086276)
chr5 (121-237)||(19283839-19283952)
chr5 (27-109)||(26121198-26121280)
chr5 (28-105)||(26835796-26835872)
chr5 (169-239)||(15544051-15544120)
chr5 (27-113)||(15690916-15691000)
chr5 (31-113)||(24265354-24265435)
chr5 (31-113)||(24341985-24342066)
chr5 (27-116)||(18208125-18208212)
chr5 (53-113)||(17171455-17171514)
chr5 (54-110)||(22755664-22755719)
chr5 (141-229)||(23265164-23265252)
chr5 (139-239)||(26110461-26110560)
chr5 (26-109)||(15470082-15470163)
chr5 (27-113)||(17474520-17474605)
chr5 (161-239)||(26121345-26121422)
chr5 (169-239)||(28253281-28253350)
chr5 (200-237)||(20419958-20419995)
chr5 (156-237)||(24167600-24167681)
chr5 (195-239)||(20744866-20744910)
chr5 (26-102)||(24852046-24852121)
chr5 (27-110)||(18937889-18937973)
chr5 (141-239)||(24656854-24656952)
chr5 (191-237)||(32417407-32417452)
chr5 (206-239)||(17769461-17769494)
chr5 (138-195)||(24260560-24260617)
chr5 (183-239)||(26307604-26307658)
chr5 (56-113)||(34487777-34487832)
chr5 (167-239)||(23014637-23014707)
chr5 (168-228)||(32581898-32581957)
[»] chr3 (67 HSPs)
chr3 (17-239)||(8770020-8770243)
chr3 (17-219)||(8765137-8765341)
chr3 (15-238)||(22349410-22349627)
chr3 (18-239)||(21301918-21302153)
chr3 (26-237)||(17438304-17438527)
chr3 (30-217)||(16229831-16230019)
chr3 (26-239)||(4650232-4650451)
chr3 (24-217)||(12754794-12754990)
chr3 (26-217)||(20023426-20023618)
chr3 (17-223)||(932758-932978)
chr3 (109-239)||(19171803-19171933)
chr3 (26-217)||(8169907-8170097)
chr3 (125-239)||(3116407-3116517)
chr3 (27-239)||(21303229-21303453)
chr3 (28-239)||(12805766-12805989)
chr3 (26-239)||(21325340-21325566)
chr3 (28-239)||(19908307-19908531)
chr3 (36-218)||(19925505-19925701)
chr3 (36-214)||(27413780-27413957)
chr3 (27-239)||(12411151-12411372)
chr3 (54-235)||(20429714-20429908)
chr3 (28-217)||(19167433-19167620)
chr3 (157-239)||(10744902-10744984)
chr3 (14-200)||(19909833-19910020)
chr3 (27-238)||(16245604-16245827)
chr3 (27-239)||(41508367-41508591)
chr3 (27-238)||(2167492-2167714)
chr3 (141-239)||(10917918-10918016)
chr3 (37-217)||(19576105-19576286)
chr3 (119-217)||(8889130-8889229)
chr3 (167-238)||(12759388-12759459)
chr3 (141-237)||(21825870-21825965)
chr3 (147-239)||(28728944-28729036)
chr3 (141-232)||(821515-821606)
chr3 (183-238)||(18458467-18458522)
chr3 (140-238)||(18736672-18736769)
chr3 (139-239)||(7478334-7478429)
chr3 (140-239)||(5508336-5508434)
chr3 (26-113)||(17155931-17156016)
chr3 (120-223)||(8319055-8319155)
chr3 (141-222)||(8557130-8557211)
chr3 (141-238)||(31286017-31286112)
chr3 (29-109)||(2723712-2723790)
chr3 (141-239)||(6289903-6290001)
chr3 (27-113)||(8445960-8446045)
chr3 (26-123)||(8882996-8883094)
chr3 (167-237)||(13908253-13908322)
chr3 (35-109)||(18736555-18736628)
chr3 (27-113)||(21825744-21825829)
chr3 (141-237)||(8143617-8143711)
chr3 (27-107)||(8267076-8267155)
chr3 (53-113)||(10745040-10745099)
chr3 (148-236)||(10923150-10923238)
chr3 (177-240)||(11517998-11518061)
chr3 (138-216)||(8445846-8445922)
chr3 (54-113)||(3116321-3116380)
chr3 (27-99)||(8143767-8143837)
chr3 (183-238)||(11533018-11533073)
chr3 (27-101)||(8319196-8319269)
chr3 (183-237)||(27542958-27543011)
chr3 (181-239)||(23056212-23056269)
chr3 (27-113)||(31285890-31285975)
chr3 (139-236)||(7495094-7495186)
chr3 (183-240)||(19706839-19706895)
chr3 (167-239)||(7147988-7148059)
chr3 (169-233)||(21019625-21019688)
chr3 (183-239)||(21074581-21074636)
[»] scaffold0016 (2 HSPs)
scaffold0016 (26-238)||(3533-3745)
scaffold0016 (167-239)||(12109-12181)
[»] scaffold0638 (1 HSPs)
scaffold0638 (26-221)||(695-904)
[»] scaffold0035 (2 HSPs)
scaffold0035 (36-239)||(69913-70128)
scaffold0035 (86-178)||(98689-98779)
[»] scaffold0671 (1 HSPs)
scaffold0671 (26-199)||(482-656)
[»] scaffold0034 (1 HSPs)
scaffold0034 (26-217)||(76439-76630)
[»] scaffold0024 (1 HSPs)
scaffold0024 (27-239)||(39584-39809)
[»] scaffold1869 (1 HSPs)
scaffold1869 (119-239)||(368-488)
[»] scaffold0622 (2 HSPs)
scaffold0622 (120-239)||(728-845)
scaffold0622 (27-110)||(871-952)
[»] scaffold0008 (4 HSPs)
scaffold0008 (119-239)||(48172-48289)
scaffold0008 (91-218)||(234362-234490)
scaffold0008 (168-237)||(54862-54931)
scaffold0008 (27-110)||(55003-55086)
[»] scaffold0005 (2 HSPs)
scaffold0005 (120-239)||(168282-168397)
scaffold0005 (17-110)||(168163-168256)
[»] scaffold0386 (2 HSPs)
scaffold0386 (14-201)||(6575-6764)
scaffold0386 (14-217)||(5965-6171)
[»] scaffold0650 (1 HSPs)
scaffold0650 (141-239)||(6287-6385)
[»] scaffold0263 (1 HSPs)
scaffold0263 (17-177)||(15708-15881)
[»] scaffold0672 (1 HSPs)
scaffold0672 (154-237)||(1736-1819)
[»] scaffold0838 (1 HSPs)
scaffold0838 (148-238)||(2371-2461)
[»] scaffold0832 (1 HSPs)
scaffold0832 (148-238)||(2402-2492)
[»] scaffold0042 (1 HSPs)
scaffold0042 (139-237)||(29909-30006)
[»] scaffold0957 (1 HSPs)
scaffold0957 (27-239)||(3153-3369)
[»] scaffold0102 (2 HSPs)
scaffold0102 (140-223)||(35553-35636)
scaffold0102 (26-113)||(35677-35763)
[»] scaffold0155 (2 HSPs)
scaffold0155 (140-222)||(35995-36077)
scaffold0155 (27-113)||(35868-35954)
[»] scaffold0043 (2 HSPs)
scaffold0043 (140-238)||(89854-89951)
scaffold0043 (30-109)||(89731-89809)
[»] scaffold0054 (2 HSPs)
scaffold0054 (26-113)||(72148-72236)
scaffold0054 (186-237)||(72074-72125)
[»] scaffold0001 (3 HSPs)
scaffold0001 (31-113)||(69218-69301)
scaffold0001 (154-239)||(81487-81571)
scaffold0001 (183-239)||(69082-69137)
[»] scaffold0048 (1 HSPs)
scaffold0048 (141-239)||(78594-78692)
[»] scaffold0019 (2 HSPs)
scaffold0019 (140-238)||(181706-181803)
scaffold0019 (141-238)||(11241-11338)
[»] scaffold0062 (1 HSPs)
scaffold0062 (17-217)||(43091-43304)
[»] scaffold0653 (1 HSPs)
scaffold0653 (141-239)||(4484-4582)
[»] scaffold0136 (2 HSPs)
scaffold0136 (169-239)||(15494-15564)
scaffold0136 (63-102)||(15376-15416)
[»] scaffold0111 (1 HSPs)
scaffold0111 (27-114)||(3771-3859)
[»] scaffold0427 (1 HSPs)
scaffold0427 (140-203)||(2818-2881)
[»] scaffold0063 (1 HSPs)
scaffold0063 (200-239)||(51123-51162)
[»] scaffold0006 (2 HSPs)
scaffold0006 (188-239)||(18793-18844)
scaffold0006 (188-239)||(223078-223129)
[»] scaffold0090 (1 HSPs)
scaffold0090 (153-234)||(7425-7506)
[»] scaffold0002 (2 HSPs)
scaffold0002 (119-188)||(94574-94643)
scaffold0002 (30-109)||(114631-114710)
[»] scaffold0351 (1 HSPs)
scaffold0351 (30-113)||(5641-5724)
[»] scaffold0238 (1 HSPs)
scaffold0238 (148-239)||(19111-19201)
[»] scaffold0128 (1 HSPs)
scaffold0128 (195-234)||(37413-37452)
[»] scaffold0620 (1 HSPs)
scaffold0620 (201-237)||(7661-7697)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 29242744 - 29242519
Alignment:
Q  14 aatatatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29242744 aatatatatacaaggagattcaaagtatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 29242645  T
Q  114 cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29242644 cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttatta 29242545  T
Q  214 cttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||||||||||||||||    
T  29242544 cttgataaacaatttggtacacttgc 29242519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 21987854 - 21988081
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||||||||||| |||| |||||||||||||| |||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  21987854 aatatatatacagagggtattcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgc 21987953  T
Q  112 aacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||| ||||||| |   ||||||||||||||||||||||||||||    
T  21987954 aacctaacttttataccgtcagcttacaaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttat 21988053  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    || ||||||||  |||||||||||||||    
T  21988054 tatttggtaaaggatttggtacacttgc 21988081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 18736112 - 18736339
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| ||||||||| |||||| | ||||||| |||||||||||  ||||||||||||||| |||||||||||||||| ||||    
T  18736112 aataaatatacagaggggattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgc 18736211  T
Q  112 aacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||||||| ||||||| ||||||| |||||||||| ||||||  ||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||    
T  18736212 aacctaaattttataccgtcaacctacaaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttat 18736311  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| |||||||||||||||    
T  18736312 tacttgttaaacgatttggtacacttgc 18736339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 21449301 - 21449089
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttata 126  Q
    ||||||| |||||||||||||||| ||||||||| |||| |||||| ||| |||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  21449301 gggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg-aacctatcttttata 21449203  T
Q  127 tcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaa 225  Q
     |||||| |||||||||||| |||||   |||||||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |    
T  21449202 ccgtcaaacttacaaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacga 21449103  T
Q  226 tttggtacacttgc 239  Q
    ||||||||||||||    
T  21449102 tttggtacacttgc 21449089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 17610130 - 17610354
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct--------- 116  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||             
T  17610130 ggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagctttctaacct 17610229  T
Q  117 --aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
      ||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||    
T  17610230 ttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttatta 17610329  T
Q  214 cttggtaaacaatttggtacacttg 238  Q
    |||||||||| ||||||||||||||    
T  17610330 cttggtaaacgatttggtacacttg 17610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 12208826 - 12208601
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    |||||||| |||||||||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||| |||| || |||||              
T  12208826 ggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaacagattaaaactgaaacctttctaaccct 12208727  T
Q  117 ---aacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
       | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||| |||| |||||||||||||||||||    
T  12208726 tttatcttttatatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttatta 12208627  T
Q  214 cttggtaaacaatttggtacacttgc 239  Q
    |||||||||| |||| ||||||||||    
T  12208626 cttggtaaacgatttagtacacttgc 12208601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 236
Target Start/End: Complemental strand, 9401731 - 9401511
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac--- 119  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||   |||||       
T  9401731 aggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaaacagataaaaattgcaactctctaaccgt 9401632  T
Q  120 -------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
           | |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||   | |||||||||||||||||||   ||||||||    
T  9401631 tatcttttattatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctactt---actttatt 9401535  T
Q  213 acttggtaaacaatttggtacact 236  Q
    || |||||||| ||||||||||||    
T  9401534 acctggtaaactatttggtacact 9401511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 16916806 - 16917016
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| |||||||||| ||||| ||||||||| ||||||||||| |||||||| | ||||||||||||| |||||||||||||    
T  16916806 aataaatatacagaggggattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgc 16916905  T
Q  112 aacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcacttta 210  Q
    ||| ||||||||||| ||||||| || ||||||| |||||| |||||||| |||||||| ||||||| || |||||||||||||||||||| | ||||||    
T  16916906 aac-taacttttataccgtcaacctataaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaacttta 16917004  T
Q  211 ttacttggtaaa 222  Q
    ||||||| ||||    
T  16917005 ttacttgataaa 16917016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 15543841 - 15544065
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc---------- 115  Q
    |||||||| |||||||||||||| | ||||||||| |||||| |||| ||||||||||| || ||||||||||| ||||||||||||||               
T  15543841 ggggattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttttaaccc 15543940  T
Q  116 -taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
     || ||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  15543941 ttatcttttatatcgtcaaattaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttattac 15544040  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||||||| |||||||||||||||    
T  15544041 ttggtaaacgatttggtacacttgc 15544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 25405516 - 25405729
Alignment:
Q  38 gaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct------------aactttta 124  Q
    |||||||||||||| |||||||| | |||||||||| || ||||||||||||||||||||||| ||||||||||||| ||            ||||||||    
T  25405516 gaatcctaaccgctgcttactttct-gcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaactttta 25405614  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||||||     
T  25405615 tatcgtcaacttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacg 25405714  T
Q  225 atttggtacacttgc 239  Q
    | |||||||||||||    
T  25405715 acttggtacacttgc 25405729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 16069435 - 16069649
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaa-ttgcaacctaactttta 124  Q
    |||| |||| |||||||||||| ||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  16069435 agggtattcgaagaatcctaactgctgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaaaatttgcaaccttactttta 16069534  T
Q  125 tatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
    || || | |||||||||||||| |||||  ||||||||   |||||||||||||| || || ||| |||| | ||||||||||||||||||||||| |||    
T  16069535 taccgccaaacttacaaaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttggttaac 16069634  T
Q  224 aatttggtacacttgc 239  Q
    || |||||||||||||    
T  16069635 aa-ttggtacacttgc 16069649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 16179220 - 16179010
Alignment:
Q  38 gaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaac----ctaac-------ttttat 125  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||     |||||       ||||||    
T  16179220 gaatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaagacatctaacccttatattttat 16179121  T
Q  126 atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaa 225  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||  ||  | ||||||||||||||||||||||| ||||||||||| ||||| |    
T  16179120 atcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtttattacttgttaaacga 16179021  T
Q  226 tttggtacact 236  Q
    |||||||||||    
T  16179020 tttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 17359387 - 17359162
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac-- 119  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||| ||||| |||||| | |||||||||||||||||   |||||      
T  17359387 aggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaactctctaaccc 17359288  T
Q  120 --------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
            | ||||||||||||| ||  |||||| |||||| ||||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||||    
T  17359287 ttatcttttattatatcgtcaaccta--aaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaacttatcactttat 17359190  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| |||||||||||||||    
T  17359189 tacttggtaaacgatttggtacacttgc 17359162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 18825869 - 18825656
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||||||||||||| | |||| ||||||||| | ||||||||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| |    
T  18825869 aggggattcaaagaatccttatcgctgcttacttttctacaaccaaaacaagtaaatttgctttgttgtaaacagataaaaattgcaacttaacttttgt 18825770  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |||||| |||||| |||| || ||||||  ||||||| | || ||| ||||| |  | ||||||||||||| ||||||||||||||||||||||| |||     
T  18825769 atcgtcaaacttataaaattaagtaacgaaaattgttcgaactaaaggacaacccttgtggatacgatactttacttatcactttattacttggtcaacg 18825670  T
Q  225 atttggtacacttgc 239  Q
    | |||||||||||||    
T  18825669 a-ttggtacacttgc 18825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 21666481 - 21666687
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgc----------aac 114  Q
    |||||||||| |||||||||||||  | ||||||||| | ||||||||||||||||||||| | | ||||||||||||||||||| |          |||    
T  21666481 aaggggattcgaagaatcctaaccattgcttacttttctacaaccaaaacaggtaaacttgttgtcttgcaaacagataaaaattactagtctttttaac 21666580  T
Q  115 c--taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
    |  || ||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  21666581 ccttatcttttatatcgtcaacttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttatt 21666680  T
Q  213 acttggt 219  Q
    |||||||    
T  21666681 acttggt 21666687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 217
Target Start/End: Complemental strand, 727682 - 727489
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    |||||||||| ||||||| |||||||| |||   ||| ||||||||||||||||||| || || ||||||||||| ||||||||||||||||| ||||||    
T  727682 aaggggattcgaagaatcttaaccgctgctttactttctgcaaccaaaacaggtaaattttctatgttgcaaacaaataaaaattgcaacctatctttta 727583  T
Q  125 tatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    ||||||| |||| ||||||||| |||||  |||||||| ||||||||    ||||  | ||||| |||||||||||||||||||||||||||||    
T  727582 tatcgtcaaactaacaaaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttattacttg 727489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 18830693 - 18830482
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatat 127  Q
    |||||||||| |||| |||  | | ||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||     
T  18830693 gggattcaaaaaatcataaatgttgcttacttttatgcaaccaaaacaggtaaaatttctctgttgcaaacagatagaaattgcaacttaacttttatac 18830594  T
Q  128 cgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaat 226  Q
    |||| || ||| ||||||| ||||   ||||||||||||||||| ||||||| || ||||||||||| | ||  ||||||||| ||||||||| ||| |     
T  18830593 cgtcaaaattaaaaaaataagtaaaaagaattgtttggacgaaaggacaatccctgtggatacgataatttaagtatcactttgttacttggtcaacca- 18830495  T
Q  227 ttggtacacttgc 239  Q
    |||||||||||||    
T  18830494 ttggtacacttgc 18830482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 14779764 - 14779565
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc----taac---------ttttatatcgtcaacttaca 139  Q
    ||||||||| | ||||||||||| ||||||||| | ||||| ||||| |||||||||||||||    ||||         ||||||||||||||||||||    
T  14779764 cttacttttcttcaaccaaaacaagtaaacttgatatgttgtaaacaaataaaaattgcaacccttctaacctttttcttttttatatcgtcaacttaca 14779665  T
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||  ||||||||  ||||||||||||||||||||| || |||||| ||||||||| ||||||| |||||||||||||||  |||||||||||||||    
T  14779664 aaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttggtaaatgatttggtacacttgc 14779565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 13345337 - 13345435
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||||||||||||||||| |||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13345337 aaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgc 13345435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 31235922 - 31236145
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac-- 119  Q
    |||| |||||||||||| |||||| | ||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||||      
T  31235922 agggaattcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaattgcaactctctaaccc 31236021  T
Q  120 --------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
            | |||||||||||||||  ||||||| |||||||||||| ||||||| |||||||||||  | | ||||  ||||||| |||||||||||||    
T  31236022 ttatattttattatatcgtcaactt--aaaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctgcttatcactttat 31236119  T
Q  212 tacttggtaaacaatttggtacactt 237  Q
    ||||| |||||| ||| |||||||||    
T  31236120 tacttagtaaacgattcggtacactt 31236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 22623116 - 22622892
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgc----------aacc 115  Q
    ||||||||  |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||          ||||    
T  22623116 aggggatttgaagaatcctaacagctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatatataaaaatggcaagtctttttaacc 22623017  T
Q  116 --taacttttatatcgtcaactt-acaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
      ||||||| ||| | ||||||| | |||| || |||||||||||| ||||||||||| ||||||| ||  ||||| ||||||||||| |||||||||||    
T  22623016 gttaactttaataccatcaacttaataaaattaagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttatt 22622917  T
Q  213 acttggtaaacaatttggtacacttg 238  Q
    ||||||| ||| | ||||||||||||    
T  22622916 acttggtcaacga-ttggtacacttg 22622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 23180010 - 23179819
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| || |||||| |||||| ||||||||| | ||||||||| ||||||| ||| | | ||| ||||||||||||||||||||   ||||||||    
T  23180010 aggggattcgaataatccttaccgctgcttacttttctccaaccaaaaaaggtaaaattgttattttgtaaacagataaaaattgcaac--tacttttat 23179913  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    | |||| ||||||||||||||  ||||| |||||||| |||||||| ||||||| || |||||| ||||||||| ||| | |||||||||||||    
T  23179912 accgtcaaacttacaaaaataaataacgagaattgttcggacgaaaggacaatccctgtggatatgatactctatttactaactttattacttg 23179819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 239
Target Start/End: Complemental strand, 22664429 - 22664206
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac------ 119  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||| |||||||||||||    |||||          
T  22664429 ggattcaaagagtcctaaccgctacttacttttctgcaaccaaaacatgtaa-cttgctctgttacaaacaaataaaaattgcaatttactaacccttat 22664331  T
Q  120 --------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
            ||||||||||||||||||   ||||| | ||||||| |||||| ||||||| || |||| |  |||||| ||||||||||||||||||||||    
T  22664330 ctcttttattttatatcgtcaactta---aaataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttatcactttat 22664234  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| |||||||||| ||||    
T  22664233 tacttggtaaacgatttggtacatttgc 22664206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 24054153 - 24054001
Alignment:
Q  65 caaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttg 163  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||| || ||| |||||||| |||| |||||||| ||||| |||||   |||||||      
T  24054153 caaccaaaacaagtaaattcgctctgttgcaaacagataaaaattgaaatctatcttttataccgtcaaacttacataaataagtaacaaaaattgttga 24054054  T
Q  164 gacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    ||||||| ||||||| || |||||| |||||||||||||| |||||||||||||    
T  24054053 gacgaaaggacaatccctgtggata-gatactctacttattactttattacttg 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 14781739 - 14781930
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| |||||||||||| |||  | |||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||||||   ||||||     
T  14781739 aggggattcgaagaatcctaactgctgatcacttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaac--tacttttt 14781836  T
Q  125 tatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | | ||| |||||||||||||| ||| |  ||||| || |||||||| ||||||   | ||||||||||||||||||||  |||||||||||||    
T  14781837 tcttgtcaaacttacaaaaataagtatctagaatttttcggacgaaaggacaattcttgtggatacgatactctacttactactttattacttg 14781930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 17837615 - 17837517
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||||||||||||| ||| ||| |||||||  | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacacttgc 17837517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 21334698 - 21334818
Alignment:
Q  119 cttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||| |||| ||||||  ||  |||||||||||| |||||||||||||||||||||     
T  21334698 cttttatatcgtcaacttaaaaaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacgatactatacttatcactttattacttga 21334797  T
Q  219 taaacaatttggtacacttgc 239  Q
    ||||  ||||| |||| ||||    
T  21334798 taaatgatttgatacatttgc 21334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 23038012 - 23038110
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||| || |||||| |||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  23038012 aaaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacacttgc 23038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 3591654 - 3591752
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||||||||||||| |||||||||||  | |||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgc 3591752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24306307 - 24306404
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||||||||| |||||  |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  24306307 aaataagtaacgcgaattatttggttgaaacg-caatccctgtggatacgatactctacttatcactttattacttggtaaacgacttggtacacttgc 24306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 21847725 - 21847634
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||||||||||||||||||  | ||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  21847725 gtaacgtgaattgtttggacgaaacgacaatccatgtggatacaatactctactta-gactttattacttggtaaacgatttggtacacttgc 21847634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 32382881 - 32382968
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||||| ||| || || ||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  32382881 aaggggattcaaagaatcctaacggctgctaacatttctgcaaccaaaacaggt-aatttgctctgttgcaaacagataaaaattgcaa 32382968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 51473883 - 51473968
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  51473883 gtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac--ggtaaacgatttggtaca 51473968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 9787896 - 9787978
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  9787896 ttgtttagacgaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaatgatttggtacacttgc 9787978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 18100888 - 18100973
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18100888 ggggattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgt-aacttgctatgttgcaaacagataaaaattgcaa 18100973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 22620362 - 22620262
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| |||||| ||||| ||| ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||  |||| |||||| ||||||||    
T  22620362 aaaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagttatcactttattactttttaaagaatttgatacacttg 22620263  T
Q  239 c 239  Q
    |    
T  22620262 c 22620262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 16787724 - 16787815
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttg 229  Q
    |||||||| ||||||| |||||||||| | |||||||||||  | || |||||||||||||||||||||||||||||||| ||||| |||||    
T  16787724 caaaaataagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattacttgataaacgatttg 16787815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 28008326 - 28008244
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| || || ||||||| ||| |||||||||||||||||||    
T  28008326 gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaacaagt-aatttgctctattggaaacagataaaaattgcaa 28008244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 235
Target Start/End: Complemental strand, 33190900 - 33190681
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------aa 118  Q
    ||||| |||||||||||||||||| ||||||||| ||||| |||| ||||||| ||||| |||||||||||| ||||||||| ||| ||         ||    
T  33190900 gggatccaaagaatcctaaccgctgcttacttttctgcaatcaaaccaggtaa-cttgcactgttgcaaacaaataaaaattacaatctctaaaccttaa 33190802  T
Q  119 ct-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||       |||||||||||||||||   ||||| ||||| ||| |||||| || |||||||||||   | ||||||  ||||||||||||||| |||||    
T  33190801 ctattttattttatatcgtcaactta---aaataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctacttatcattttat 33190705  T
Q  212 tacttggtaaacaatttggtacac 235  Q
    |||||| ||||| |||||||||||    
T  33190704 tacttgataaacgatttggtacac 33190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 15807895 - 15807980
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||||| |||| |||| |||| | |||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  15807895 ggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaactggt-aacttgctctgttgcaaacaaataaaaattgcaa 15807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 24281393 - 24281277
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||||||| |||||||||   ||||| ||||||| ||||||| |||  |||||| ||||  | |||||| |||| |||||||||||||||||||||||||    
T  24281393 ttttatattgtcaactta---aaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggt 24281297  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||||||||| ||||    
T  24281296 aaacgatttggtacatttgc 24281277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 18529079 - 18529149
Alignment:
Q  40 atcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||||||| || ||||||||| | |||||||||||||||||||||||||||||||||  |||||||||||    
T  18529079 atcctaaccactgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaaattgataaaaattg 18529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 27117720 - 27117817
Alignment:
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||  |||||||||  |||||||||||   | || |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaacgatttggtaaacttgc 27117817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 26540951 - 26540896
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  26540951 tggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 26540896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 12012688 - 12012899
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa--cctaactttta 124  Q
    |||||||| ||||||||||| || |  |||||||| |||||||||||||||| |||| ||| ||||||||||| |||||||||||||   |||||  |||    
T  12012688 ggggattcgaagaatcctaatcgttgtttacttttgtgcaaccaaaacaggt-aactcgctatgttgcaaacaaataaaaattgcaatctctaaccctta 12012786  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
      || |  | |||   | ||| ||||||||||| |||| ||  ||||||||||   | ||||||| |||||||||||||||||||| |||||| |||||     
T  12012787 actctttta-tta-ttatataagtaacgcgaatagtttagataaaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacg 12012884  T
Q  225 atttggtacacttgc 239  Q
    ||||| |||||||||    
T  12012885 atttgatacacttgc 12012899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 15813155 - 15813253
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||| || ||||||||||| ||||| ||||  | ||||||||||| || ||||||||||||||||| || ||||| |||||||||||||||    
T  15813155 aaaataagtaacgagagttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataaacgatttggtacacttgc 15813253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 17121378 - 17121460
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||| || |||||||||| ||||||||| || |||| |||||    
T  17121378 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagt-aacttgctctattgcaaacaaatgaaaaatgcaa 17121460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 26648979 - 26649068
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||| ||||||||||||||||| ||||  | ||||||| ||| || |||||||| ||||||||||||||||| ||||| ||||||||    
T  26648979 taacgcgagttgtttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgatacacttg 26649068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 32383008 - 32383097
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| ||||| | ||||||||||||||||||||||||           ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32383008 aaaaataggtaacacaaattgtttggacgaaacgacaatc-----------gatactctatttatcactttattacttggtaaacgatttggtacacttg 32383096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 9787743 - 9787839
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||| | ||||||||||||| | ||||||||  ||||||||| ||||||| |||||||||  |||||||||||||||||||| | ||||||||||    
T  9787743 atatatatatggggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggt-cacttgctctgttgcaaacagttcaaaattgcaa 9787839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 24267783 - 24267880
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| |||||| |||||| || |||||||| ||||||  |||||||| |||||| ||||||||| ||||||||||| ||||  ||||| ||||||||    
T  24267783 aaataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttg 24267880  T

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Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 25403951 - 25404036
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaa 97  Q
    |||| ||||||| ||||| || ||||||||||||||||| ||||||||| || |||| |||||||||||| |||||||||||||||    
T  25403951 aataaatatacagagggggtttaaagaatcctaaccgctacttacttttctggaaccaaaaacaggtaaagttgctctgttgcaaa 25404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 15813523 - 15813623
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctac-ttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||| ||||| ||||||||||  | ||||||||||||  | ||||||| ||||||||| |||||||||||||  ||| ||||| |||||||||||||    
T  15813523 aaaaataagtaacacgaattgtttcaaagaaacgacaatccttgtggatacaatactctactttatcactttattttttgataaacgatttggtacactt 15813622  T
Q  238 g 238  Q
    |    
T  15813623 g 15813623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 147746 - 147632
Alignment:
Q  121 tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggta 220  Q
    ||||||||||||| |||   ||||| |||||||||  ||||| ||||||| |||||||  | || ||| ||||||| ||||||||||||||||||||  |    
T  147746 tttatatcgtcaaatta---aaataagtaacgcgagctgtttagacgaaatgacaatccatgtgaatatgatactccacttatcactttattacttgtga 147650  T
Q  221 aacaatttggtacacttg 238  Q
    ||| ||||| ||||||||    
T  147649 aacgatttgatacacttg 147632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 44795447 - 44795386
Alignment:
Q  160 tttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    |||||||||||||||||||  | |||||||||||||| ||||||| |||||||||||||||||    
T  44795447 tttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaaa 44795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 17121521 - 17121577
Alignment:
Q  181 tatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  17121521 tatggatatgatactctactta-cactttattacttgataaacaatttgatacacttg 17121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 24214660 - 24214560
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||||||||||| |||||   ||||| ||||||  | |||||| |||||||| ||||||  | |||||||  |||| |||||||||||||||||||||||    
T  24214660 ttttatatcgtccactta---aaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttattacttggt 24214564  T
Q  220 aaac 223  Q
    ||||    
T  24214563 aaac 24214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 25961040 - 25961085
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaa 72  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25961040 ggggattcaaagagtcctaaccgcttcttacttttctgcaaccaaa 25961085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 34481067 - 34480974
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||| ||||| |||||  |||||| |||| |||| ||| | ||||||  ||| ||||||||||||||||||||||||||||| |||| |||||    
T  34481067 aaataagtaacacgaatgttttggatgaaatgacagtcattgtggatataatattctacttatcactttattacttggtaaacgattttgtaca 34480974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 16360065 - 16360010
Alignment:
Q  57 cttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  16360065 cttttctgcaaccaaaacaggtaa-cttgctttgttgcaaacaaataaaaattgcaa 16360010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 22620488 - 22620407
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttt-tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaa 107  Q
    |||||||| |||||||| |||||||| ||||| |||| | |||||||||||||||| || | | |||||||||||||||||||    
T  22620488 aggggatttaaagaatcttaaccgctgcttacattttctacaaccaaaacaggtaa-ctcgatttgttgcaaacagataaaaa 22620407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 34481189 - 34481108
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||| || |||||| || || ||||| |||| ||||||||||| |||||| |||| |||||| |||||||||||||    
T  34481189 attcaaagaatactgaccgctactaacatttttacaacaaaaacaggtaa-cttgctttgttccaaacatataaaaattgcaa 34481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 15813417 - 15813470
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaa 80  Q
    |||||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||    
T  15813417 ggggattctaagaatactaactgctgcttacttttctgcaaccaaaacaggtaa 15813470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 16359959 - 16359871
Alignment:
Q  150 acgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||| ||||| ||||||||| |   | ||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  16359959 acgcgagttgattggatgaaacgacagtacatgtggatacaatactatactta-cattttattacttggtaaacgatttggtacacttgc 16359871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 21334592 - 21334672
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaa 107  Q
    |||||||| ||||||||||||||||  |||||||| | ||||| |||| |||| |||||||| | |||||||||||||||||    
T  21334592 ggggattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggt-aacttgctattttgcaaacagataaaaa 21334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 24214762 - 24214709
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaa 80  Q
    ||||||||||||| ||||||||||| |||| |||| |||||||||| |||||||    
T  24214762 ggggattcaaagagtcctaaccgctacttatttttctgcaaccaaaccaggtaa 24214709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 21973079 - 21973164
Alignment:
Q  27 ggggattcaaagaatcct--aaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||||||| |||||||||  |||||||  |||||||| ||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  21973079 ggggattcgaagaatcctctaaccgctg-ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgc 21973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 24306957 - 24307028
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
    ||||| |||||| |||||| || |  |||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  24306957 aaataagtaacgtgaattgcttagttgaaacgacaatccctatgaatacgatactctactta-cactttatta 24307028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 51473780 - 51473836
Alignment:
Q  56 acttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||| ||||||||||| || ||| |||| | |||||||||||||||||||||||||    
T  51473780 acttttctgcaaccaaaatagataa-cttgatatgttgcaaacagataaaaattgcaa 51473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 15813057 - 15813116
Alignment:
Q  54 ttacttttttgcaaccaaa-acaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||| |||| |||||||| |||||| ||||| ||||| |||||||||||||    
T  15813057 ttacttttttgcaagcaaagacaggtaa-cttgctatgttggaaacatataaaaattgcaa 15813116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 114)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 29 - 239
Target Start/End: Complemental strand, 13418744 - 13418534
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatc 128  Q
    ||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13418744 ggattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatacc 13418645  T
Q  129 gtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcac-tttattacttggtaaacaatt 227  Q
    ||||||||| ||||||| ||||||  || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| | |    
T  13418644 gtcaacttaaaaaaataagtaacgacaaatgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattacttggttaacga-t 13418546  T
Q  228 tggtacacttgc 239  Q
    ||||||||||||    
T  13418545 tggtacacttgc 13418534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 11803307 - 11803103
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgca 112  Q
    |||||||||||| ||||||||| || |||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  11803307 aatatatatacagaggggattcgaataatcctaaccgctggttacttctctgcaaccaaaacaggtaaacttgctctgttgcaaacaactaaaaatttca 11803208  T
Q  113 acctaacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||||||||||||||  ||||| |||||||||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  11803207 acctaacttttatactgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttat 11803108  T
Q  212 tactt 216  Q
    |||||    
T  11803107 tactt 11803103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 17077325 - 17077133
Alignment:
Q  42 cctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtcaacttacaaa 141  Q
    |||||||||| ||||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaacaggtaaacttactctattgcaaacagataaaaattgcaacccaacttttataccgtcaacttacaaa 17077226  T
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||| |||||  ||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||    
T  17077225 aataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatttggtaca 17077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 1848092 - 1848324
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    ||||||| | || ||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1848092 atatatatagggagattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaagct 1848191  T
Q  117 -----------aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatc 204  Q
               || |||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||||| |  ||||||||||||| ||||||||    
T  1848192 ctctaacccttaatttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatc 1848291  T
Q  205 actttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||  ||||||||||||||||||    
T  1848292 actttattacttggt--acaatttggtacacttgc 1848324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 4449193 - 4449002
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||| ||||||| | |||||| |||||||||||||||||| |||||| ||||||||    
T  4449193 aggggattcaaagaattctaaccgctgtttacttttttgcaaccaaaataggtaaattcgctctgctgcaaacagataaaaatttcaacct-acttttat 4449095  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | |||| |||||||||||||| |||||  ||||||||||||| ||| |||| || || ||||||| ||||| |||||||||||||||||||||    
T  4449094 accgtcaaacttacaaaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttattacttg 4449002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 8053923 - 8054157
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgca 112  Q
    |||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||| | ||||||| |||||||| || ||    
T  8053923 aatatataaacagaggggattcaaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctatattgcaaatagataaaatttaca 8054022  T
Q  113 a-----------cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactt 201  Q
    |           | || ||||||||||||||||||||||||||| |||| | ||||||||||||   |||||||||   | |||||||||||||||| ||    
T  8054023 agtcttttaactcttatcttttatatcgtcaacttacaaaaataagtaatgagaattgtttgga---aacgacaattcatgtggatacgatactctaatt 8054119  T
Q  202 atcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||| |||||||||||||||    
T  8054120 atcactttattacttggtaaacgatttggtacacttgc 8054157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 13277726 - 13277525
Alignment:
Q  18 tatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||| | |||||||||||||| || | ||||| | ||||||||||||||||||||||||    
T  13277726 tatatacagaggggattcaaagaatcctaatcgctacttacttttctacaaccaaaacaggtcaattcgctctatagcaaacagataaaaattgcaacct 13277627  T
Q  117 aacttttatatcg-tcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    |||||||||| || | ||||||||||||||  ||||  |||||||| |||||||| |||||||  | |||||||||||||||| |||||||| |||||||    
T  13277626 aacttttataccgttaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctatttatcactgtattact 13277527  T
Q  216 tg 217  Q
    ||    
T  13277526 tg 13277525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 18368843 - 18369079
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgca--- 112  Q
    ||||| ||| |||||||||| |||||||||||| ||||||||||| | ||||||||| ||||||| |||||| ||||||||||||||||||||||||       
T  18368843 atatagacagggggattcaaggaatcctaaccgtttcttacttttctacaaccaaaagcaggtaa-cttgctttgttgcaaacagataaaaattgcacga 18368941  T
Q  113 -------acc---taacttttatatc-gtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactt 201  Q
           |||   || |||||||||  ||||||||| ||||||| |||||  ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18368942 ctttctaaccctttatcttttatatttgtcaacttataaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctactt 18369041  T
Q  202 atcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  18369042 atcactttattacttggtaaactatttagtacacttgc 18369079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 2564053 - 2563818
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac- 114  Q
    ||||| ||| |||||||| ||| |||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||| ||||     
T  2564053 atataaacagggggattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaact 2563954  T
Q  115 --ctaac----------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
      |||||          | ||||||||| |||||||| ||||| ||||| | ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  2563953 ctctaacccttatcttttattatatcgtgaacttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta 2563854  T
Q  203 tcactttattacttggtaaacaatttggtacacttgc 239  Q
     |||||||||||||||||||| |||||||||||||||    
T  2563853 -cactttattacttggtaaacgatttggtacacttgc 2563818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 20582479 - 20582259
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa------------cc 115  Q
    ||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||            |     
T  20582479 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaatctttttaaccct 20582380  T
Q  116 taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    || ||||||||||||||||||| |||| || |||||| ||||||| |||| |||||||| ||| || ||||||||||||   |||||||||||||||| |    
T  20582379 taccttttatatcgtcaacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgatac---acttatcactttattaat 20582283  T
Q  216 tggtaaacaatttggtacacttgc 239  Q
    |||||||| ||||||||| |||||    
T  20582282 tggtaaacgatttggtacccttgc 20582259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 30 - 228
Target Start/End: Original strand, 39273053 - 39273263
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacct----------aa 118  Q
    ||||| ||| |||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||| |||| ||| ||||||| |          ||    
T  39273053 gattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaactttataacccttaa 39273152  T
Q  119 cttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    ||||||||||||||| |||||||||||| ||||| | |||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||     
T  39273153 cttttatatcgtcaaacttacaaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactctacttatcactttattactta 39273252  T
Q  218 gtaaacaattt 228  Q
    |||||||||||    
T  39273253 gtaaacaattt 39273263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 8978879 - 8979103
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa--cctaac--- 119  Q
    |||||||| ||||||||||||| ||| |||| |||| ||||||||||| |||||||||||| ||| |||||||||||| ||||||||||  ||||||       
T  8978879 aggggatttaaagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatcctaaccct 8978978  T
Q  120 ------ttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
          |||||||| ||||| ||||| |||||| |||| |||||||||||||||||||| ||||||  | |||||| |||||||||||||||||||||||    
T  8978979 tttatcttttatattgtcaaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttatt 8979078  T
Q  213 acttggtaaacaatttggtacactt 237  Q
    ||||||||||  |||||||||||||    
T  8979079 acttggtaaatgatttggtacactt 8979103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 16058906 - 16059099
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| |||||||||||| ||| ||||||||  ||||||||||| || ||||| |||||||||||||||||||||||||||| ||| | |||||||    
T  16058906 aggggattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgaaac-tcactttta 16059004  T
Q  125 tatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    || |||||| |||||||||||| |||||   |||||||||||||||| |||||||  | |||||||||||||||||||| | |||||||||||||    
T  16059005 taccgtcaaacttacaaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctacttactaactttattacttg 16059099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 8877647 - 8877441
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttact-tttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----------- 113  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||               
T  8877647 aggggattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaac 8877548  T
Q  114 -cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
     | |||||||||||  ||||||||| ||||||| |||  | ||||||||| ||| ||| | |||||  | |||||||||||||||||||||||| |||||    
T  8877547 ccttaacttttatactgtcaacttataaaaataagtacagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatcaccttatt 8877448  T
Q  213 acttggt 219  Q
    |||||||    
T  8877447 acttggt 8877441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 8054468 - 8054588
Alignment:
Q  119 cttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||  || || |||||||||||||||||||||||||||| ||||    
T  8054468 cttttatatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcactttattatttgg 8054567  T
Q  219 taaacaatttggtacacttgc 239  Q
    ||||| |||||||||||||||    
T  8054568 taaacgatttggtacacttgc 8054588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 237
Target Start/End: Original strand, 3329542 - 3329755
Alignment:
Q  38 gaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaacttttatat------ 127  Q
    |||||||||||||| ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||   |||||  |||| |          
T  3329542 gaatcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaacccttatctttcatt 3329641  T
Q  128 ---cgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
       ||| || |||||||||||| |||||||  |||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||     
T  3329642 atacgttaaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaat 3329741  T
Q  224 aatttggtacactt 237  Q
    |||||| |||||||    
T  3329742 aatttgatacactt 3329755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 5108790 - 5108566
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac--- 119  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||| |||   |||||       
T  5108790 ggggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattgtaactctctaaccat 5108691  T
Q  120 ---------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
             | |||||||||||||||| ||| |  |||    ||||||||||||||||||||||||||  | |||||||||||||||||||| |||||||    
T  5108690 atactcttttattatatcgtcaacttaaaaataagtgtt---cgaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cacttta 5108595  T
Q  211 ttacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| ||||||||||||||||    
T  5108594 ttacttggtaaataatttggtacacttgc 5108566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 6042676 - 6042462
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac--ctaactt- 121  Q
    |||||||||||||||||||||||||| |||| |||| ||||||| |||| |||||||||| |||||||||||||| ||||||||||||||  ||| |||     
T  6042676 aggggattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattgcaacatctatcttt 6042578  T
Q  122 --ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
      ||||| ||||||  |  ||||||| ||||||| ||||||||| |||||||||||| | || |||||||||||||||||||| || |||||||| ||||    
T  6042577 tattataccgtcaaact--aaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttattacatggt 6042481  T
Q  220 aaacaatttggtacacttg 238  Q
    |||| ||||| ||||||||    
T  6042480 aaacgatttgatacacttg 6042462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 13759835 - 13759957
Alignment:
Q  116 taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||  | |||||| ||||||||||||||||||||||||     
T  13759835 taacttttatatcgtcaaacttacaaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaa 13759934  T
Q  215 ttggtaaacaatttggtacactt 237  Q
    ||||||||| |||||||||||||    
T  13759935 ttggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 237
Target Start/End: Complemental strand, 3734817 - 3734598
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------aact 120  Q
    |||||||||| ||||||||  | ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||         ||||    
T  3734817 gattcaaagagtcctaaccattgcttacttttctgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 3734719  T
Q  121 -------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
           |||||||||||||||||   ||||| |||||| ||||||||||||| |||| |||||   | |||||||||||||||||||||||||||||||    
T  3734718 cttttattttatatcgtcaactta---aaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactttatta 3734622  T
Q  214 cttggtaaacaatttggtacactt 237  Q
    ||||||||| ||||||||||||||    
T  3734621 cttggtaaaaaatttggtacactt 3734598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 10586896 - 10587123
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaacca-aaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac-- 119  Q
    ||||||||||||||| || ||||| || |||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||| ||  |||      
T  10586896 aaggggattcaaagagtcttaaccactgcttacttttttgcaaccagaaacatgtat-cttgctctgttgcaaacagataaaaattgcaatctttaaccc 10586994  T
Q  120 ------------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcact 207  Q
                |||||||| || ||||||   ||||| |||||  || |||||| ||||||||||||||| || | |||||||||||||||||||||||    
T  10586995 ttatttcttttattttatattgtaaactta---aaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcact 10587091  T
Q  208 ttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||| |||||||||||||||    
T  10587092 ttattacttggtaaacgatttggtacacttgc 10587123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 18662664 - 18662440
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac--ctaactttta 124  Q
    |||||||| |||| ||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||   |||||| | |    
T  18662664 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaacaaataaaaattgcaatatctaactctca 18662566  T
Q  125 tatcgtcaacttacaa----------aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
     ||| |  | ||| |           ||||| |||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||| | |    
T  18662565 aatcttttatttatattttgttcaccaaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgc 18662466  T
Q  215 ttggtaaacaatttggtacacttgct 240  Q
    ||||||||| ||||| ||||||||||    
T  18662465 ttggtaaacgatttgatacacttgct 18662440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 9864327 - 9864425
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||| |||||||| |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgc 9864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 16365820 - 16365707
Alignment:
Q  122 ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||||||  |||||| ||||||||||||||||| || |||||||||||  | ||||||||||||||||||| | |||||||||||||||||    
T  16365820 ttatatcgtcaactta--aaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctactttttactttattacttggtaa 16365723  T
Q  222 acaatttggtacactt 237  Q
    || |||||||||||||    
T  16365722 acgatttggtacactt 16365707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 222
Target Start/End: Original strand, 17191097 - 17191284
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtcaa- 133  Q
    ||||||||||| | || ||| ||||| ||||||||||| |||||||| | ||||||||| ||||||||||||||||||||   ||||||||| | ||||     
T  17191097 aagaatcctaatcactactttcttttctgcaaccaaaaacaggtaaaatcgctctgttggaaacagataaaaattgcaact--acttttataccatcaaa 17191194  T
Q  134 cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttggtaaa 222  Q
    |||| ||||||| |||||| |||| ||| ||| |||| ||||| | ||||||||||||||||||||||| | ||||||||||||| ||||    
T  17191195 cttaaaaaaatacgtaacgagaatcgttcggatgaaaggacaacccctatggatacgatactctacttactaactttattacttgataaa 17191284  T

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Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 7318389 - 7318273
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   ||||| |||| ||||  ||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  7318389 ttttatatcgtcaactta---aaataagtaatgcgagctgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggt 7318293  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| || ||||||||||||    
T  7318292 aaacgatatggtacacttgc 7318273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 23099966 - 23100051
Alignment:
Q  154 gaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23099966 gaattgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgc 23100051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 9731626 - 9731726
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| ||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||| |||||  ||||| ||||||||||||||    
T  9731626 aaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacgatttggtacacttg 9731725  T
Q  239 c 239  Q
    |    
T  9731726 c 9731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 17153028 - 17153251
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac---- 119  Q
    ||||||||||||| || |||||||| ||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||  ||| ||  |||        
T  17153028 ggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaa-cttgctttgttgcaaacagataaaaataacaatctctaaccctt 17153126  T
Q  120 ----------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
              |||||| |||||||||||   ||||| |||||||||  ||||| |||||||||||||||  | |||||||||||||||||||||||||||    
T  17153127 atctcttttattttatgtcgtcaactta---aaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcacttt 17153223  T
Q  210 attacttggtaaacaatttggtacactt 237  Q
     ||||||||||||| ||||| |||||||    
T  17153224 cttacttggtaaactatttgatacactt 17153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 18449340 - 18449242
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||| ||||||||||  |||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||    
T  18449340 aaataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgc 18449242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 11221163 - 11221264
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| ||||||| ||||||||  |||||||||||||| || ||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  11221163 aaaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttg 11221262  T
Q  239 ct 240  Q
    ||    
T  11221263 ct 11221264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 5530119 - 5530025
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacac 235  Q
    ||||| ||||| | ||||||||||||||||||| |||| || |||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatttggtacac 5530025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 4785952 - 4785837
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||   ||||||| |||||| ||| || |||||||||||||||||| || |||||  ||||||||||||||||||||||||||||||    
T  4785952 ttttatatcgtcaact---aaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggt 4785856  T
Q  220 aaacaatttggtacacttgc 239  Q
     ||| ||||| |||||||||    
T  4785855 -aacgatttgatacacttgc 4785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 4818952 - 4818837
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||   ||||||| |||||| ||| || |||||||||||||||||| || |||||  ||||||||||||||||||||||||||||||    
T  4818952 ttttatatcgtcaact---aaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggt 4818856  T
Q  220 aaacaatttggtacacttgc 239  Q
     ||| ||||| |||||||||    
T  4818855 -aacgatttgatacacttgc 4818837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 9574523 - 9574407
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   |||||  |||||||| | |||| |||||||| |||||| || | |||||||||||||||||||||||||||| ||||||    
T  9574523 ttttatatcgtcaactta---aaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctacttatcactttattccttggt 9574427  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||| ||||||||||    
T  9574426 aaacgatttagtacacttgc 9574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 31493014 - 31492930
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||    
T  31493014 aattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgc 31492930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 4579195 - 4579098
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| |||||||||||||| ||| ||||||| || |||||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatcac-ttattacttagtaaacgatttggaacacttgc 4579098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 18495471 - 18495374
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||| | |||||||| ||||||||||||||| | ||||||||  |||| |||||||||||||||||||| ||||||||||| |||||||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaaacaatttagtacacttg 18495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 216
Target Start/End: Original strand, 22067128 - 22067302
Alignment:
Q  41 tcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcg-tcaactta-c 138  Q
    ||||||||| | ||||||||| ||||||||||||||||||| |  || ||||||| ||| ||||||||||    ||||||||||||||| | |||||| |    
T  22067128 tcctaaccgttgcttacttttctgcaaccaaaacaggtaaattctctttgttgcagacatataaaaattg----ctaacttttatatcgttaaacttacc 22067223  T
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattactt 216  Q
    ||||| |  ||||  |||||| | |||||||| ||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  22067224 aaaaaaaactaactagaattgatcggacgaaaggacaatccctatggatatgatactctacttactaactttattactt 22067302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 1584654 - 1584545
Alignment:
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |||||||||||||   ||||| ||||||||| |||||| |||||||| |||||| || |||||||||||||| |||||||||||||||||||||||||      
T  1584654 tatcgtcaactta---aaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatg 1584559  T
Q  225 atttggtacacttgc 239  Q
    | |||||||||||||    
T  1584558 a-ttggtacacttgc 1584545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 2350746 - 2350846
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||| ||||||| ||| ||||||| |||||||||||  | ||||||||||| |||||||| || ||||||||||||||||  ||||||||||||||    
T  2350746 aaaaatatttaacgcggattatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttg 2350845  T
Q  239 c 239  Q
    |    
T  2350846 c 2350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 16297820 - 16297919
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||| | ||||||||||||||||| |||||||  | || |||||||| |||||||||||| |||||||||||||||  |||||||||||||||    
T  16297820 aaaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatttggtacacttgc 16297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 9131135 - 9131049
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||   || |||||||||| ||||||||| |||||||||||||    
T  9131135 ggggattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaa 9131049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 10937700 - 10937602
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| | ||||||||||   ||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  10937700 aaataagtaatgtgaattgtttgattgaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgc 10937602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 12329797 - 12329682
Alignment:
Q  122 ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||||||  |||||| |||||||| ||| ||||| | |||||||||||  | ||||||| |||||||| |||||| ||| |||||||||||    
T  12329797 ttatatcgtcaactta--aaaataagtaacgcggattatttgggcaaaacgacaatccttgtggatactatactctatttatcaatttcttacttggtaa 12329700  T
Q  222 acaatttggtacacttgc 239  Q
    || |||||||||| ||||    
T  12329699 acgatttggtacatttgc 12329682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 17203124 - 17203035
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaattt 228  Q
    |||||||| |||||||| ||||||||||||||||||||||| |  || |||||||||||||||||| ||||||||||||  ||||||||||    
T  17203124 caaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctacttat-actttattacttcataaacaattt 17203035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 140339 - 140255
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||| |||||| || || ||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  140339 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 8313412 - 8313477
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    |||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||    
T  8313412 ttgtttagacgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaa 8313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 10584487 - 10584584
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||| ||||||||||  | ||||||||||||  | ||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttg 10584584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 4986671 - 4986556
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||| |||||||||||||   ||||| |||||||||  | ||| |||||||||||||||  | ||| ||| |||||||||| | ||||||||||||||||    
T  4986671 ttttttatcgtcaactta---aaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggt 4986575  T
Q  220 aaacaatttggtacacttg 238  Q
    |||| ||||||||||||||    
T  4986574 aaacgatttggtacacttg 4986556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 4990769 - 4990654
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||| |||||||||||||   ||||| |||||||||  | ||| |||||||||||||||  | ||| ||| |||||||||| | ||||||||||||||||    
T  4990769 ttttttatcgtcaactta---aaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggt 4990673  T
Q  220 aaacaatttggtacacttg 238  Q
    |||| ||||||||||||||    
T  4990672 aaacgatttggtacacttg 4990654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 13289294 - 13289485
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttata 126  Q
    ||||||| |||||| |||||||||| ||| |||| ||||||| |||||||||||| | || || ||||||||||| ||||||||||| ||  ||||||||    
T  13289294 gggattcgaagaattctaaccgcttattaattttctgcaaccaaaaacaggtaaattcgcactattgcaaacagaaaaaaattgcaa-ctttcttttata 13289392  T
Q  127 tcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
     |||| ||||||||||||||  |||   |||||||| ||| |||| |||||||  | ||||||| ||| | |||||| | |||||||||||||    
T  13289393 ccgtcaaacttacaaaaataattaattagaattgttcggaggaaaggacaatccatgtggatacaatattatacttactaactttattacttg 13289485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 15869650 - 15869595
Alignment:
Q  184 ggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  15869650 ggatacgatactctacttatcactttattacttggtaaacgatttgatacacttgc 15869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 8293920 - 8293997
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||||||||||||| || |  || ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8293920 attcaaagaatcctaaccactgcgaacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaaatt 8293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 9500542 - 9500444
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||||||||| |||||||| ||||||  | |||||||||||||||| | ||||| |||||||||||||||  |||| ||||||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaatgattttgtacacttgc 9500444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 21230410 - 21230312
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| | ||||| || |||||||||| |||| ||||| |||||||||||||||||||| ||||||| ||||||||| ||||| || ||||||    
T  21230410 aaataagtaacacaaattgcttagacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgc 21230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 7492262 - 7492358
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacact 236  Q
    ||||||| |||| || ||||||||| ||||||| ||||||  | ||||||||||||||||||||||| |||||||| |||  ||||||||||||||||    
T  7492262 aaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattac-tggataacaatttggtacact 7492358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 12181720 - 12181608
Alignment:
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttgg-acgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
    |||||||||||||   ||||| ||||| |||||||||||| |||||||||||||   | |||||||| |||||||||| ||||||||||||||  |||||    
T  12181720 tatcgtcaactta---aaataagtaactcgaattgtttgggacgaaacgacaattcatgtggatacggtactctacttctcactttattactttataaac 12181624  T
Q  224 aatttggtacacttgc 239  Q
     |||||||| ||||||    
T  12181623 gatttggtatacttgc 12181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 4786064 - 4785985
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaa 107  Q
    ||||||| |||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||| |||||||||    
T  4786064 gggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggt-aacttgctctattgcaaatagataaaaa 4785985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 7397367 - 7397280
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||| |||| |||||||||||||||| ||||||||| ||||||| ||||||| | |||||| | |||||||||||||||||||||||||    
T  7397367 agggaattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagat-aacttgttttgttgcaaacagataaaaattgcaa 7397280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 1587780 - 1587681
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||||||||||||| ||||| || |||  | | |||| ||||||||| ||||||||||| ||||| |||||| |||||||||| ||||    
T  1587780 aaaataggtaacgcgaattgtttggatgaaacaactatctatgtagatatgatactctaattatcactttactacttagtaaacgatttggtacatttgc 1587681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 18466103 - 18466012
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggta 232  Q
    ||||| ||||| | ||||||||||  ||||||| |||| ||||||||||| |||||||||||||||||||||| ||| ||||  ||||||||    
T  18466103 aaataagtaacacaaattgtttggctgaaacgagaatccctatggatacgttactctacttatcactttattatttgataaatgatttggta 18466012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 8313267 - 8313352
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| |||| ||||||  | | ||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  8313267 ggggattccaagagtcctaaatgttgcttacttttctgcaaccaaaataggtaa-cttgctctgttgaaaacagataaaaattgcaa 8313352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 9866570 - 9866639
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||| | | |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9866570 aacgacaattattgtggatatgatactctactta-cactttattatttggtaaacaatttggtacacttgc 9866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 14195974 - 14196071
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||||||||||||||||||||| | |||   | |||||||| |||| |||||| |||||||||| ||| ||||| |||||||||||||||    
T  14195974 aaataagtaacgcgaattgtttggacgaaacaataattcttgtggatacggtactttactta-cactttattatttgataaacgatttggtacacttgc 14196071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 21912481 - 21912579
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||| | ||||||| |  |||||||||||| |  | |||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||    
T  21912481 aaataagtaacgtggattgttttgttgaaacgacaatccccgtagatacgatactcaacttatcactttattatttgataaacaatttgatacacttgc 21912579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 3191042 - 3191134
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    ||||||||| ||||||||   |||||  |||| |||||||||||||||||||||||||| |||| ||||  ||||| ||||| |||||||||||||    
T  3191042 ttttatatcctcaactta---aaataaataacacgaattgtttggacgaaacgacaatccctatagatataatactttacttttcactttattact 3191134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 10648677 - 10648588
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttg 229  Q
    |||||| ||||| |||||||||| || ||||||||||||  |  | ||| ||||||||| |||||||||||||||||||||||| |||||    
T  10648677 aaaataagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattacttggtaaacgatttg 10648588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 18661646 - 18661589
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    ||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  18661646 tggatacaatactctacttatcactttattgtttggtaaacgatttggtacacttgct 18661589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 5797567 - 5797511
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||    
T  5797567 tggatacgatactctacttattactttattacttggtaagcgatttgttacacttgc 5797511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 6005934 - 6005839
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| |||||| ||||||||||||| |||||||||||  | ||||||| |||||||  ||| || ||||||| |||||||||||||||||| ||||    
T  6005934 aaataagtaacgtgaattgtttggaccaaacgacaatccatgtggatacaatactctggtta-caatttattaattggtaaacaatttggtaaactt 6005839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 7492160 - 7492223
Alignment:
Q  50 cttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  7492160 cttcttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaacagttaaaaattgcaa 7492223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 1587904 - 1587821
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||| || || ||||| ||||||||| ||||||||| |  ||||| |||||||||||||||||| |||||||||||||    
T  1587904 ggggattcaaagattcatatccgctgcttacttttctgcaaccaaga--ggtaa-cttgctctgttgcaaacaaataaaaattgcaa 1587821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 6006150 - 6006084
Alignment:
Q  39 aatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaa 106  Q
    |||| |||||||| ||||||||| ||| |||||||||||| ||||| |||||||||||||||||||||    
T  6006150 aatcttaaccgctacttacttttctgccaccaaaacaggt-aacttactctgttgcaaacagataaaa 6006084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 6013692 - 6013593
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||| || |||||||||||  ||| || ||||  | |||||||||||||||||||||||||| | |||||| ||||  |||||||||||||||    
T  6013692 aaaataagtaaagccaattgtttggataaaatgagaatccttgtggatacgatactctacttatcacttaagtacttgataaatgatttggtacacttgc 6013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 9916649 - 9916566
Alignment:
Q  156 attgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||  ||||| ||||||  | ||||||||||||||||||||| |||||||||| |||||||  |||||||| ||||||    
T  9916649 attgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgc 9916566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 9924561 - 9924478
Alignment:
Q  156 attgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||  ||||| ||||||  | ||||||||||||||||||||| |||||||||| |||||||  |||||||| ||||||    
T  9924561 attgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgc 9924478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 26134791 - 26134845
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  26134791 tggatacgatactctactta-cattttattacttggtaaacgatttggtacacttg 26134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 9245279 - 9245181
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| ||||||||||  |||||| |||||||  | ||||||||||||||| |||| || ||| ||||||||||||| ||| |||||| ||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgc 9245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 9574631 - 9574546
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||| |||  |||||||| | ||| |||| ||||| | |||||||| ||||||||||||||||||| |||    
T  9574631 ggggattcaaagaatcctaactgctgtttacttttcttcaaacaaaccaggtta-cttgctctattgcaaacagataaaaattacaa 9574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 14195847 - 14195932
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| ||||||| |||  | | ||||| ||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  14195847 ggggattcgaagaatcttaattgttgcttacatttctgcaatcaaaacagataa-cttgctctgttgcaaacagataaaaattgcaa 14195932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 17829793 - 17829712
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||| ||||||| ||||| || |||| |||| | |||||||||||| ||| |||| |||||||||||||||||||||||    
T  17829793 ggggattcgaagaatcttaaccactgcttaattttctccaaccaaaacagttaa-cttgttctgttgcaaacagataaaaatt 17829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 21102320 - 21102374
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||| | || |||| |||||||||||||||||||||||||||||||    
T  21102320 gaaacgacaatcattgtgaatacaatactctacttatcactttattacttggtaa 21102374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 22339312 - 22339408
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactt---tattacttggtaaacaatttggtaca 234  Q
    ||||| |||| |||||||||||||||||||||||||||  |  |||| ||||||| ||||||||||||   ||||||||| ||||  ||||||||||    
T  22339312 aaataagtaaggcgaattgtttggacgaaacgacaatccttgcggatgcgatactttacttatcactttaatattacttgataaatgatttggtaca 22339408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 5797735 - 5797659
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaac-ttgctctgttgcaaacagat 102  Q
    |||||||||||||||||||||||||| || ||  || ||||| |||||||||||||| ||||||||||||||| ||||    
T  5797735 aggggattcaaagaatcctaaccgctgctaac-attctgcaatcaaaacaggtaaactttgctctgttgcaaatagat 5797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 7397266 - 7397198
Alignment:
Q  168 aaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||  | |||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||    
T  7397266 aaacgacaatccatgtggatacgatactctagtta-cactttattacttggtaaacggtttggtacactt 7397198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 9261288 - 9261211
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggta 232  Q
    ||||||||  |||||| |||||||  ||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||    
T  9261288 aattgtttaaacgaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaacgattaggta 9261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 14755147 - 14755228
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| |||||||| |||||   | |||||| |||||||||||| |||||||| |||||| ||||| ||||||||||||||    
T  14755147 ttgtttagacgaaacaacaatacttgtggatatgatactctacttctcactttactacttgataaacgatttggtacacttg 14755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 16365927 - 16365847
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||| || ||||||||| | |||||| |||| |||||||    
T  16365927 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgt-aacttgctcagatgcaaatagatcaaaattg 16365847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 18467535 - 18467474
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
    |||||||| |||||||||||||||  | ||||||| ||||| ||||||||||||||||||||    
T  18467535 aattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 21227233 - 21227184
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  21227233 gatacgatactctacttatcactttattactttgtaaatgatttggtaca 21227184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 12391257 - 12391185
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||  || || |||||| ||||| ||||||||||||||| ||| ||||| |||||||||||||||    
T  12391257 gaaacgacaattcctgtgaatacgacactcttcttatcactttattatttgataaactatttggtacacttgc 12391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 31493141 - 31493066
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgca 112  Q
    |||||||||||||| | ||||| ||| | ||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  31493141 aagaatcctaaccgttgcttacatttctacaaccaaaacaagtaa-ctgactctgttgcaaacagataaaaattgca 31493066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 1872884 - 1872785
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| ||||||||||| | ||||||||||    | ||||||||||||||||||||||| | |||||||| || ||| |||||  ||||||||    
T  1872884 aaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattacttagtgaacgatttgtcacacttgc 1872785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 4258913 - 4258983
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||||| |||||||||||||||||| ||| || ||||||| ||||||||| ||||| ||||||||    
T  4258913 gaaacaacaatcattatggatacgatactctagtta-cattttattatttggtaaacgatttgttacacttg 4258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9890237 - 9890182
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    ||||||||||||||||||  ||||||||||| ||||||| |||| |||||||||||    
T  9890237 gatacgatactctacttactactttattactcggtaaacgatttagtacacttgct 9890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 16297724 - 16297794
Alignment:
Q  43 ctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||||| |||||||||||  |||||| ||| |||||||||||||| |||||||||||||    
T  16297724 ctaaccgctgcttacttttctgcaaccaaaaataggtaa-cttactctgttgcaaacatataaaaattgcaa 16297794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 19153395 - 19153298
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||| || ||||||| ||||||||| || |  ||||  ||||||| | |||||||||||||||||||||||  |||||||||||||||    
T  19153395 aaaataagtaacgcgagttatttggacaaaacgacaacca-tgcggatgtgatactc-atttatcactttattacttggtaaaagatttggtacacttgc 19153298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 20752794 - 20752697
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||| || ||||||| ||||||||| || |  ||||  ||||||| | |||||||||||||||||||||||  |||||||||||||||    
T  20752794 aaaataagtaacgcgagttatttggacaaaacgacaacca-tgcggatgtgatactc-atttatcactttattacttggtaaaagatttggtacacttgc 20752697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 1814153 - 1814115
Alignment:
Q  201 tatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  1814153 tatcactttattacttggtaaataatttggtacacttgc 1814115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 10648766 - 10648717
Alignment:
Q  63 tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  10648766 tgcaaccaaaacatgtaa-cttgctttgttgcaaacagataaaaattgcaa 10648717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 23093363 - 23093310
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  23093363 gatacaatactctactta-cactttattacttagtaaacgatttggtacacttgc 23093310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 2350647 - 2350703
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    |||||||||||||||||||||||||| || ||| | ||||| ||||||||||||||||    
T  2350647 cttacttttttgcaaccaaaacaggt-aatttgatgtgttgtaaacagataaaaattg 2350703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 7318445 - 7318412
Alignment:
Q  80 aacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||||||||||||||||    
T  7318445 aacttgctctgttgcaaacagataaaaattgcaa 7318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 15303666 - 15303718
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||    
T  15303666 gatacgatactttactta-cactttattacctggtaaacgatttggtacacttg 15303718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 16306748 - 16306711
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaa 222  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16306748 gatacgatactctacttatcactttattacttgttaaa 16306711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 5047434 - 5047485
Alignment:
Q  187 tacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| |||||||| |||||||||||||||||||  |||||||||||||||    
T  5047434 tacgataatctactta-cactttattacttggtaaatgatttggtacacttgc 5047485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 9731516 - 9731587
Alignment:
Q  42 cctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||| ||||||||| ||||||| ||||||||| |||||||| |||| || | |||||||||||||||    
T  9731516 cctaaccgctgcttacttttatgcaaccaaaaacaggt-aacttgctatgttacacatagataaaaattgcaa 9731587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 19153493 - 19153434
Alignment:
Q  54 ttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| ||||||||||| ||||||| |||| | |||||||||||||||||||||||||    
T  19153493 ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgcaa 19153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 20752892 - 20752833
Alignment:
Q  54 ttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| ||||||||||| ||||||| |||| | |||||||||||||||||||||||||    
T  20752892 ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgcaa 20752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 9130991 - 9130906
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggata--cgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||||||||| ||||  | ||||||  | ||||| |||||| |||||||||||||| ||||||||||| |||||||||    
T  9130991 aattatttggacgaaacgataatccatgtggatatacaatactatactta-cactttattacttgataaacaatttgatacacttgc 9130906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 9721003 - 9720964
Alignment:
Q  200 ttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  9721003 ttatcactttattatttggtaaacgatttggtacacttgc 9720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 15869819 - 15869734
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||| ||||||||| |  |||||||| ||||||| ||||||||| |||||  ||| |||||||||||| ||||||||||    
T  15869819 ggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggt-aactttttctattgcaaacagat-aaaattgcaa 15869734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 33035522 - 33035473
Alignment:
Q  189 cgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||| |||||||||||||| |||||||| ||||| |||||||||    
T  33035522 cgatactctacctatcactttattac-tggtaaacgatttgatacacttgc 33035473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 8e-70; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 17101769 - 17101990
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||| ||| |||||||  | ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  17101769 atataaacatggggatttgatgaatcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattggaacc 17101868  T
Q  116 taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    || |||||||| |||||||||||||| ||| ||||| |  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17101869 tatcttttataccgtcaacttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattact 17101968  T
Q  216 tggtaaacaatttggtacactt 237  Q
    |||||||| ||||| |||||||    
T  17101969 tggtaaacgatttgatacactt 17101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 24114158 - 24114381
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    |||||||| |||||||||||||||| |||||||||  |  |||||||||||||||||||||||| |||||||||||||||||||||||||              
T  24114158 ggggattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaattgcaacctttataaccct 24114257  T
Q  117 -aacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
     | ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||    
T  24114258 tatcttttatatcgtcaacttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttattact 24114357  T
Q  216 tggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||    
T  24114358 tggtaaacaatttggtacacttgc 24114381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 29382244 - 29382460
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacct-----------aactttt 123  Q
    ||||||||||||| || ||||||||| |||||||||||  ||||| ||||||| ||||||||||||||||||||||||| ||           |||||||    
T  29382244 aagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaaccattaactttt 29382343  T
Q  124 atatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    |||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  29382344 atatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaa 29382443  T
Q  223 caatttggtacacttgc 239  Q
    | |||||||||||||||    
T  29382444 cgatttggtacacttgc 29382460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 27659653 - 27659468
Alignment:
Q  33 tcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc--taacttttatatcg 129  Q
    ||||||||||| ||||||| |||| |||| |||||| |||| |||||||||||||||| ||||||| |||| ||||||||||||  || |||||||||||    
T  27659653 tcaaagaatcc-aaccgctgcttaattttctgcaacaaaaaacaggtaaacttgctcttttgcaaatagattaaaattgcaacccttatcttttatatcg 27659555  T
Q  130 tcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
    |||||||||||||||| ||||| || | |||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||    
T  27659554 tcaacttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattactt 27659468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 24269821 - 24269598
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac----ctaact- 120  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||  |||||||||||||||||||| ||||||||    | ||||     
T  24269821 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacta-ctctgttgcaaacagataaagattgcaactattcaaactc 24269723  T
Q  121 ------tttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
          |||||| |||||| ||||||||||||  ||| | ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  24269722 ttattttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctactta-cactttatta 24269624  T
Q  214 cttggtaaacaatttggtacacttgc 239  Q
    ||||||||| ||||||||||||||||    
T  24269623 cttggtaaataatttggtacacttgc 24269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 237
Target Start/End: Original strand, 18448417 - 18448639
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac-----ctaac-- 119  Q
    ||||| ||||||||| |||||| | ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||||      |||||      
T  18448417 gggatacaaagaatcataaccgttgcttacttttatgcaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaactgcaagactttctaacca 18448515  T
Q  120 ------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
          |||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||| |||| |||||||| ||||| |||| |||||||||    
T  18448516 tttatcttttatatcgtcaacttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttatta 18448615  T
Q  214 cttggtaaacaatttggtacactt 237  Q
    |||||||||  |||||||||||||    
T  18448616 cttggtaaatgatttggtacactt 18448639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 23893089 - 23893278
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatat 127  Q
    ||||||||||||||||||||  ||  |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||     
T  23893089 gggattcaaagaatcctaactactagttacttttctgcaaccaaaacaggtaaatttgctttgttgcaaacagataaaaattgcaa-ctatcttttatac 23893187  T
Q  128 cgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||| |||||||||||||| |||||  |||||||| |||| |||  ||||||  | | |||| ||||||||||||||||||| ||||||||    
T  23893188 cgtcaaacttacaaaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatcacttcattacttg 23893278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 25226360 - 25226137
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-----------cc 115  Q
    ||||||||||| ||||||||  ||| ||||||||||| ||||||| ||| ||||||||||||| ||||||||| |||||||||| ||           ||    
T  25226360 ggggattcaaacaatcctaattgctacttacttttttacaaccaagacatgtaaacttgctctattgcaaacatataaaaattggaagactttctaaccc 25226261  T
Q  116 taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    | ||||||||||| |||| |||| ||||||||||||||| ||||||||||| ||||| | |||| || |  ||||||||||| |||||||||||||||||    
T  25226260 ttacttttatatcttcaaacttataaaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaacttatcactttattac 25226161  T
Q  215 ttggtaaacaatttggtacacttg 238  Q
    ||| ||||| |||| |||||||||    
T  25226160 ttgataaacgatttagtacacttg 25226137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 13314865 - 13315089
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaactt 121  Q
    ||||||||| ||||||| |||||| | ||||||||| ||||||||||| |||||||| ||| || |||||||||| ||||||||||||||   ||||| |    
T  13314865 aggggattcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaactctctaacgt 13314964  T
Q  122 ttat----------atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||||          |||||||||||| |||| || ||||||||||||||||||||||||| | ||||  | ||||||||||||| |||||||||||||||    
T  13314965 ttatcttttattatatcgtcaacttataaaa-taagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcactttat 13315063  T
Q  212 tacttggtaaacaatttggtacactt 237  Q
    |||||||||||  || ||||||||||    
T  13315064 tacttggtaaatgatctggtacactt 13315089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 16404126 - 16403952
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||||||||||||||| |||| |||| |||| |||||| ||||||| | ||||||||||||||| ||||||||||||| || ||||||||    
T  16404126 aggggattcgaagaatcctaaccgctgcttatttttctgcagccaaaataggtaaattcgctctgttgcaaacaaataaaaattgcaa-ctcacttttat 16404028  T
Q  126 atcgt--caacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctac 199  Q
    | |||   |||||||||||||| |||||  |||||||| |||||||| |||||||  | |||||||||||||||||    
T  16404027 accgtgaaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 18569276 - 18569107
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcg 129  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||| |||| || ||||||||| ||    
T  18569276 gattcaaaaaatcgtaaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaaaatagcaa-ctcacttttataccg 18569178  T
Q  130 tc--aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactcta 198  Q
    ||  |||||||||||||| |||||  ||||| ||  ||||||| ||||||| ||||||||| |||||||||    
T  18569177 tcaaaacttacaaaaataagtaacaagaatttttaagacgaaaggacaatccctatggatatgatactcta 18569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 17509443 - 17509266
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-----------cctaacttttatatcgtcaacttacaaa 141  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||           | ||| ||||||| |||||||||| |||    
T  17509443 cttacttttttgcaacaaaaacaggtaaacttgctctattgcaaacaggtgaaaattgcaagtcttttaacccttaatttttataccgtcaacttataaa 17509344  T
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||| |||| | |||||||||||||||||  ||||||  | |||||| ||||||||||||||||||||||||||||||    
T  17509343 aataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggt 17509266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 19264270 - 19264064
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| || || ||| |||||| ||||| ||||| |||||||||  || |||||||||||||||||||| ||||||||||| |    
T  19264270 aataaatatacagaggggattcgaaaaagccttaccgctgcttaccttttttcaaccaaaaatagataaacttgctctgttgcaaaaagataaaaattac 19264171  T
Q  112 aacctaacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
    ||| ||||||||||| | || |||||||||||||| |||||| |||||  || || ||||  ||||||  |||| ||||||||||  |||||||||||||    
T  19264170 aacttaacttttataacatcaaacttacaaaaataagtaacgagaattaatttgatgaaagaacaatccatatgaatacgatacttaacttatcacttta 19264071  T
Q  211 ttacttg 217  Q
    |||||||    
T  19264070 ttacttg 19264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 34497340 - 34497115
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    |||||||||| |||||||||||||| ||||||||| ||||| |||| ||||||| | |||| ||||||||| ||||||||||||||| ||              
T  34497340 ggggattcaaggaatcctaaccgctgcttacttttctgcaagcaaaccaggtaa-catgctatgttgcaaaaagataaaaattgcaatctctaacccttt 34497242  T
Q  117 aact-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
    ||||       ||||||||||||| |||   ||||| |||||| | |||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  34497241 aactcttttattttatatcgtcaattta---aaataagtaacgtggattgtttggacgaaacgacagtctctatggatacgatactctactaatcacttt 34497145  T
Q  210 attacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||| ||||| || ||||||    
T  34497144 attacttggtaaacgatttgatagacttgc 34497115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 14528248 - 14528149
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||| || ||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  14528248 aaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaacgatttggcacacttgc 14528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 24904731 - 24904633
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| | ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatttggtacacttgc 24904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 24110544 - 24110754
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac----ctaac--- 119  Q
    |||||||| || |||||||||| || ||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||||||    |||||       
T  24110544 ggggattcgaataatcctaacccctgcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagat-aaaattgcaacttttctaaccct 24110642  T
Q  120 ----ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
        |||||||||||||||||||||||            | |||||||||| ||| || ||||  | ||||||||||||||||||||||| |||||||||    
T  24110643 tatgttttatatcgtcaacttacaaaa------------acttgtttggacaaaatgaaaatcgttgtggatacgatactctacttatcattttattact 24110730  T
Q  216 tggtaaacaatttggtacacttgc 239  Q
    |||||||  ||||| |||||||||    
T  24110731 tggtaaatgatttgatacacttgc 24110754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 2637697 - 2637603
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||| |||||| || |||||| |||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  2637697 aaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatttgataca 2637603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 5851039 - 5850942
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||| || |||||||||  ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttg 5850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 15238896 - 15238799
Alignment:
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||||||||||| ||||||||||||||   | ||||||||||| ||||||||||| ||| ||||||||||||||||||| |||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgc 15238799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 19786847 - 19786732
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||| |||||||| || ||   ||||| ||| ||||||||||||||||||| || ||||||||| |||||| ||||| |||||||||||||||||    
T  19786847 ttttatatcatcaacttaaaacaa---gtaacacgagttgtttggacgaaacgacagtccctatggatatgatactttacttgtcactttattacttggt 19786751  T
Q  220 aaacaatttggtacacttg 238  Q
    |||| |||||||| |||||    
T  19786750 aaacgatttggtatacttg 19786732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 26394573 - 26394644
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaac 98  Q
    |||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26394573 ggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 31288448 - 31288360
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||  |||||  |||| ||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  31288448 taacgcgaatgatttggttgaaaagacaatccctatggatacgatactttactta-cactttattacttggtaaacgatttggtacactt 31288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 25182302 - 25182526
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac---- 119  Q
    ||||||||||||| |||||||| ||  || ||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||| ||  |||        
T  25182302 ggggattcaaagagtcctaaccactgtttccttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaatctctaaccctt 25182400  T
Q  120 ----------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
              ||||||||||||||||||   ||||| ||||||| |   |||| ||||||| |||||||  | || |||||||||||||||| |||||||    
T  25182401 atctcttttattttatatcgtcaactta---aaataagtaacgcaagcagtttagacgaaatgacaatccatgtgaatacgatactctacttgtcacttt 25182497  T
Q  210 attacttggtaaacaatttggtacacttg 238  Q
    |||| |||||||| |||||||| ||||||    
T  25182498 attatttggtaaataatttggtccacttg 25182526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 44011025 - 44011116
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtac 233  Q
    |||||||||||| ||||  ||| |||||||||||||||  | |||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  44011025 aaatatgtaacgtgaatcattttgacgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaaacgatttggtac 44011116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 30783784 - 30783835
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30783784 tggatacgatactctacttatcactttattacttggtaaacgatttggtaca 30783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 7983805 - 7983720
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||| ||| | ||||||||| |||||||||| ||||  |||||||| ||| |||||||||||||||||||||    
T  7983805 ggggattcaaagaatcctacccgttgcttacttttctgcaaccaaaccagg-caacttgctatgtcgcaaacagataaaaattgcaa 7983720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 17976717 - 17976619
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||| ||| | |||||||||| ||||  | ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||    
T  17976717 aaataagtaatgcgaaatgtgtagacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatttggcacacttgc 17976619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 21314723 - 21314641
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||| |||||| | |||||||| ||||||||| |||| || | |||||||||| ||||||||||||||||||||||||||    
T  21314723 aaaaataagtaacgagtattgtttgcacgaaacgaaaatccctgtagatacgatacactacttatcactttattacttggtaa 21314641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 30806475 - 30806596
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatgga-----tacgatactctacttatcactttattac 214  Q
    ||||||||||||||   || |||||| ||||||| ||||||||||| ||||||||||||  | ||||     ||||||||||||||||||||||||||||    
T  30806475 ttttatatcgtcaa---actaaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttattac 30806571  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||  ||||| ||||| |||||||||    
T  30806572 ttaataaacgatttgatacacttgc 30806596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 14075692 - 14075599
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||| |||||||  |||||||||  ||||||||||||  | ||||||||||| ||||||||||||||| ||||||||||||  ||||||||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaaagatttggtaca 14075599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 6885056 - 6884958
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||| ||| | ||||||||||||||||||||||  | | |||||||||||| |||||||||||||||||| |||| || |||| ||||||||||    
T  6885056 aaaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacacgatttagtacacttgc 6884958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 26008090 - 26008023
Alignment:
Q  172 gacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| || | ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  26008090 gacaatccctcttgataccatactctacttatcactttattacttggtaaatgatttggtacacttgc 26008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 13698078 - 13697994
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||| || ||| | || ||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  13698078 ggggattcaaagagtcataatcactgcttacttttctgcaaccaaa-caggtaa-cttgctctgttgcaaagagataaaaattgcaa 13697994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 24644935 - 24644838
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||||| ||||||  |||||| ||||  | ||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  24644935 aaataagtaatgcgaattatttggaaaaaacgataatccatgtggatacaatactctactta-cactttattacttggtaaataatttggcacacttgc 24644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 30122156 - 30122253
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||||||||||||| ||| |||||||  | |||||| ||||||||||||| ||||||||||||||| ||   |||||||||||||||    
T  30122156 aaataagtaatgcgaattgtttggacaaaatgacaatccatgtggatatgatactctactta-cactttattacttggaaagtgatttggtacacttgc 30122253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 14528355 - 14528288
Alignment:
Q  45 aaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||| ||||||||| |||||||||| ||||||| |||||| |||||||||||| ||||||||||||    
T  14528355 aaccgctgcttacttttctgcaaccaaaccaggtaa-cttgctttgttgcaaacagctaaaaattgcaa 14528288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 13697971 - 13697862
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   ||||| |||||||   ||||||||||||||||| ||||  | |||||||||||||||       ||||||||| |||||    
T  13697971 ttttatatcgtcaactta---aaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactct-------actttattaattggt 13697882  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||||||||||||||    
T  13697881 aaacgatttggtacacttgc 13697862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 28276778 - 28276856
Alignment:
Q  160 tttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| |||| | |||| ||||||||||||||||| |||||||||||| ||| ||||||||| ||||| |||||||||    
T  28276778 tttggacaaaactataatccctatggatacgatactc-acttatcacttttttatttggtaaacgatttgatacacttgc 28276856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 30122033 - 30122114
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| |  ||||| || ||||||||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||    
T  30122033 attcaaagagttataaccactgcttacttttctgcaaccaaaataggtaa-cttactctgttacaaacagataaaaattgcaa 30122114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 9642102 - 9642018
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgca 112  Q
    |||||||||||||||  |||||||| || || ||| |||||| |||||| ||||  |||||||||||||| |||||||||||||||    
T  9642102 ggggattcaaagaattttaaccgctgctaacatttctgcaactaaaacaagtaat-ttgctctgttgcaagcagataaaaattgca 9642018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 5052964 - 5053020
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| |||||||||||| |||||||||||  ||||||| |||||||||||||||    
T  5052964 tggatacaatactctacttagcactttattacccggtaaacgatttggtacacttgc 5053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 44010897 - 44010984
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| ||| ||||||| |||||||| |||||| || ||||||||||| || |||| |||| ||||||||||||| |||||||||||||    
T  44010897 agggggttcgaagaatcttaaccgctacttactcttctgcaaccaaaaacatgtaa-cttgttctgttgcaaacatataaaaattgcaa 44010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 17969481 - 17969414
Alignment:
Q  172 gacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| ||||||||||| || |||||||||||||||||| ||||  ||| || ||||||||    
T  17969481 gacaatcactatagatacgatactatatttatcactttattacttgataaatgattcggcacacttgc 17969414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 26615269 - 26615339
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||||||   ||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||||    
T  26615269 gaaacgacaattcatatggatacaatactctacttatcactttattagttggt-aacgatttgatacacttg 26615339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 14626244 - 14626166
Alignment:
Q  37 agaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    ||||||||||| ||| ||||||||| ||||||| |||| |||||||| ||||||  | |||||| ||||||||||||||    
T  14626244 agaatcctaactgctgcttacttttctgcaaccaaaaaaaggtaaacatgctctaatccaaacacataaaaattgcaac 14626166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 30235419 - 30235377
Alignment:
Q  197 tacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  30235419 tacttatcactttattacttggtaaacgattttgtacacttgc 30235377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 24723484 - 24723520
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24723484 tggatacgatactttacttatcactttattacttggt 24723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 21314848 - 21314761
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| || | ||||||||||| ||||||||| || ||| |||| |||| ||||||||||| ||| || |||||||| |||||||    
T  21314848 ggggattcgaatactcctaaccgctacttacttttatgtaactaaaaacaggcaaacttgctctattgtaagcagataaatattgcaa 21314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 24119812 - 24119866
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| |||||||||||| |||||||| ||||||||||| |||||| |||||||    
T  24119812 tggatacaatactctactta-cactttataacttggtaaacgatttggcacacttg 24119866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 19786903 - 19786870
Alignment:
Q  80 aacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||||||||||||||| |||    
T  19786903 aacttgctctgttgcaaacagataaaaattacaa 19786870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 14006144 - 14006112
Alignment:
Q  190 gatactctacttatcactttattacttggtaaa 222  Q
    |||||||||||||||| ||||||||||||||||    
T  14006144 gatactctacttatcattttattacttggtaaa 14006112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 14657034 - 14656994
Alignment:
Q  46 accgcttcttacttttttgcaaccaaaacaggtaaacttgc 86  Q
    |||||| ||||||||| || |||||||||||||||||||||    
T  14657034 accgctacttacttttctgtaaccaaaacaggtaaacttgc 14656994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 13909079 - 13908853
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa-----------c 114  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||           |    
T  13909079 ggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaagactttctaacc 13908980  T
Q  115 ctaacttttatatcgtcaac-ttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
     | ||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  13908979 tttacttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttatta 13908880  T
Q  214 cttggtaaacaatttggtacacttgct 240  Q
    |||||||||| ||||||||||||||||    
T  13908879 cttggtaaacgatttggtacacttgct 13908853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 19492586 - 19492798
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    |||||||| |||||||||||||||  ||||||||| ||||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  19492586 ggggattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaacaaataaatattgcaacctaacttttat 19492685  T
Q  126 atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaa 225  Q
    || |||||| |||||||||| ||||||||||||||||||| |||||||||||   | |||||||||||||||||||||| |||||||||||||||||| |    
T  19492686 attgtcaacctacaaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaacga 19492785  T
Q  226 tttggtacacttg 238  Q
    |||||||||||||    
T  19492786 tttggtacacttg 19492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 13692544 - 13692768
Alignment:
Q  17 atatatacaagg-ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    ||||||||| || |||||| ||||||||||||  || ||||||||| ||||||||||| |||||||||||||||| || |||||  ||||||||||||||    
T  13692544 atatatacagggcggattcgaagaatcctaactactgcttacttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaac 13692643  T
Q  115 ctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||  ||||||| | ||||| |||||||||| ||||| |||||||||||| |||||||||||||  | |||||| |||||||||||||||||||||||||    
T  13692644 ctatattttataccttcaacctacaaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattac 13692743  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||||||| |||||||||||||||    
T  13692744 ttggtaaacgatttggtacacttgc 13692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 17709989 - 17709756
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-- 113  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||      
T  17709989 atatatacataggggattcgaagaatcctaacagctacttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaatttcaagt 17709890  T
Q  114 ----------cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttat 203  Q
              | || ||||||||||||||| ||| ||||||| |||||| |||||||   ||| |||  |||||| |||||||||| |||||||||||||    
T  17709889 ctttttaacccttatcttttatatcgtcaaattataaaaataagtaacgagaattgt---gacaaaagaacaatccctatggatacaatactctacttat 17709793  T
Q  204 cactttattacttggtaaacaatttggtacacttgct 240  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17709792 cactttattacttggtaaacgatttggtacacttgct 17709756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 15164990 - 15164768
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc----------t 116  Q
    |||||||| |||||  |||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||           |    
T  15164990 ggggattcgaagaaaactaacctccacttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaactctctaaccctt 15164891  T
Q  117 aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| ||||||| || ||||||||||||||| ||||| | || ||||||    
T  15164890 aacttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattact 15164791  T
Q  216 tggtaaacaatttggtacacttg 238  Q
    |||||||| ||||||||||||||    
T  15164790 tggtaaacgatttggtacacttg 15164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 40 - 239
Target Start/End: Complemental strand, 17217031 - 17216817
Alignment:
Q  40 atcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac------------tttta 124  Q
    |||||||||| | ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||            | |||    
T  17217031 atcctaaccgttgcttacttttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtatta 17216932  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||| ||||||||||     
T  17216931 tatcatcaacttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacg 17216832  T
Q  225 atttggtacacttgc 239  Q
    |||||||||| ||||    
T  17216831 atttggtacatttgc 17216817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 7582523 - 7582299
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa--cctaa---- 118  Q
    ||||||||||||||||||||||| || |||| |||| ||||||||||| |||||||||||| ||| |||||||||||| ||||||||||  |||||        
T  7582523 aggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatcctaagcct 7582424  T
Q  119 -----cttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
         ||||||||||||||| ||||| |||||| |||| ||  |||||||||||||||| ||||||  | |||||| |||||||||||||||||||||||    
T  7582423 tttatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttatt 7582324  T
Q  213 acttggtaaacaatttggtacactt 237  Q
    ||||||||||  |||||||||||||    
T  7582323 acttggtaaatgatttggtacactt 7582299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 17672219 - 17672002
Alignment:
Q  34 caaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------aact---- 120  Q
    |||| ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||         ||||        
T  17672219 caaataatcctaactgcttcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaacctttaactcttt 17672121  T
Q  121 ---tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
       |||||||||| ||||||   ||||| ||||||||| |||||| |||||||| ||||||  | ||||||| |||||||||||||||||||||||||||    
T  17672120 tattttatatcgttaactta---aaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttg 17672024  T
Q  218 gtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||||||||    
T  17672023 gtaaacgatttggtacacttgc 17672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 13128768 - 13128973
Alignment:
Q  48 cgcttcttacttttttgcaacc--aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac----------ttttatatcgtca 132  Q
    |||| ||||||||| |||||||  |||||||| |||||| ||||||| |||||| ||||||||||||||   |||||          | |||||| ||||    
T  13128768 cgctgcttacttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaactctctaacccttatcttttattatatggtca 13128867  T
Q  133 acttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggta 232  Q
    ||| | ||||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  13128868 actaa-aaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggta 13128966  T
Q  233 cacttgc 239  Q
    |||||||    
T  13128967 cacttgc 13128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 16730318 - 16730494
Alignment:
Q  70 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct----------aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaatt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |          ||||||||||| ||||| |||||||||||| ||||||||| ||    
T  16730318 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttaacttttatattgtcaaacttacaaaaataagtaacgcgagtt 16730417  T
Q  159 gtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacac 235  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||||| || ||| |||| | |||| ||||||    
T  16730418 gtttggacgaaacgaaaatccttttggatacgatactctacttatcactttctttcttcgtaagcgatttagtacac 16730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 11490648 - 11490534
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||   || |||||| ||||||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||| |    
T  11490648 ttttatatcgtcaa---actaaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttgat 11490552  T
Q  220 aaacaatttggtacactt 237  Q
    ||||||||||||||||||    
T  11490551 aaacaatttggtacactt 11490534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 17026216 - 17026394
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttt 123  Q
    |||||||||| |||||||||||||||| ||||||| | ||||||| |||||||||||| || |||||||||||||||||||||| ||||| || ||||||    
T  17026216 aaggggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaa-ctcactttt 17026314  T
Q  124 atatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
    |||  ||| |||||||||||||| |||||  ||||||||   |||||| |||||||  | || |||||||||||||||||    
T  17026315 atactgtcaaacttacaaaaataagtaactagaattgttcccacgaaaggacaatccatgtgaatacgatactctactta 17026394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 25094780 - 25094589
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| |||||||||||||||| |||  |||| | || ||||||| ||||||| | ||| ||||||||||||||||||||||||| ||||||||||    
T  25094780 aggggattctaagaatcctaaccgctgcttgattttctacatccaaaactaggtaaattcgctttgttgcaaacagataaaaattgcaa-ctaactttta 25094682  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    || ||| ||| ||||||| || |||||  |||||||||||||||||  ||||||  | |||||| ||||||||||||| | |||||||||||||    
T  25094681 taccgttaac-tacaaaattaagtaacaagaattgtttggacgaaagaacaatccatgtggatatgatactctacttactaactttattacttg 25094589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 221
Target Start/End: Original strand, 17337009 - 17337216
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac--- 119  Q
    |||||||| ||||||| ||| | || ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    | |||       
T  17337009 ggggattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaaatctcaaaccct 17337108  T
Q  120 ---------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
             | ||||||||||||||   ||||||| ||||||| |||||||||||||||| ||||||| || |||||||||||||||||||||||| |||    
T  17337109 ttactcttttattatatcgtcaact---aaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctacttatcacgtta 17337205  T
Q  211 ttacttggtaa 221  Q
    ||||| |||||    
T  17337206 ttactcggtaa 17337216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 21323873 - 21323974
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |||||| ||||||||| |||| ||||||||    
T  21323873 caaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacactt 21323972  T
Q  238 gc 239  Q
    ||    
T  21323973 gc 21323974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 13992883 - 13992973
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| |||||||||||||| |||||| ||||  | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13992883 gtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacactt 13992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 19882738 - 19882640
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||||||||||||||||||||||||||||  | | |||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacacttgc 19882640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 20315098 - 20315000
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||| ||||||||||||||||||||||||  | |||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttgc 20315000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 25098044 - 25097856
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatat 127  Q
    |||||| |||||||||||||||| | |||||||   ||||||||| |||||||| ||||| |||||| |||||||||||||||||| |||||||| ||||    
T  25098044 ggattcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattgcaa-ctaactttaatat 25097946  T
Q  128 cgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
     |||||| || ||||||| |||||  ||||| || |||| |||  ||||||  | |||||||||||||||||||| | |||||||||||||    
T  25097945 tgtcaac-tataaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctacttactaactttattacttg 25097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 12578249 - 12578365
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   ||||| | ||||| |||||||||||| |||||||||||  | |||||||||||||||| |||||||||||||| |||||    
T  12578249 ttttatatcgtcaactta---aaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggt 12578345  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||  |||||||||||||||    
T  12578346 aaatgatttggtacacttgc 12578365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 14649010 - 14648895
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   ||||| ||||| |||  | ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  14649010 ttttatatcgtcaactta---aaataagtaacacgagctatttagaagaaacgacaatc-ctgtggatacgatactctacttatcactttattacttggt 14648915  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||||||||||||||    
T  14648914 aaacgatttggtacacttgc 14648895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 22175972 - 22176061
Alignment:
Q  150 acgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||  ||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  22175972 acgcgaattgtttggagaaaatgacaatctctatggatacaatactctacttatcactttattacttgataaacgatttggtacacttgc 22176061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 19092519 - 19092295
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aactttta 124  Q
    |||||| |||||| |||||||||||  |||||||| || |||||||||||||||  || |||||||| ||||||||||||||||||| ||  |||| |||    
T  19092519 ggggatgcaaagagtcctaaccgctatttacttttctgtaaccaaaacaggtaat-ttactctgttgtaaacagataaaaattgcaatctctaactctta 19092421  T
Q  125 t--------------atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
    |              ||||||||||||   ||||| | |||| || ||||||||||||||||||||||  | || || ||||||||| ||||||||||||    
T  19092420 tctcttttatttaatatcgtcaactta---aaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttcttatcacttta 19092324  T
Q  211 ttacttggtaaacaatttggtacacttgc 239  Q
    ||||||| |||||||||||||||||||||    
T  19092323 ttacttgataaacaatttggtacacttgc 19092295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 19562048 - 19562278
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgc--------aacc- 115  Q
    ||||||||| |||||| |||||||||  |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||        ||||     
T  19562048 aggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaattaaataaccc 19562147  T
Q  116 ---taactt---ttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactt 208  Q
       || |||   |||||  ||| |||||| ||||||| ||||  | ||||||||||| |||||||||||   | |||| |||||||| ||||||||||||    
T  19562148 ttttatcttttattataatgtcaaactta-aaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttatcactt 19562246  T
Q  209 tattacttggtaaacaatttggtacacttgct 240  Q
    ||||||||||||||  ||||||||||||||||    
T  19562247 tattacttggtaaatgatttggtacacttgct 19562278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 17951189 - 17951394
Alignment:
Q  45 aaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac--------------ttttatatc 128  Q
    ||||||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||  |||              |||||||||    
T  17951189 aaccgctgcttgcttttctgcaaccaaatcaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaacccgtcactcttttattttatatc 17951287  T
Q  129 gtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaattt 228  Q
    |||||||||   ||||| |||||||||  |  || |||||||||||||   | |||||||||||||| |||||||||||||| |||||||||||| ||||    
T  17951288 gtcaactta---aaataagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttggtaaacgattt 17951384  T
Q  229 ggtacacttg 238  Q
    ||||||||||    
T  17951385 ggtacacttg 17951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 5679321 - 5679206
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||| ||||||   ||||| ||||||||||||||||||||||||| | | |   | | |||||||||||||||| ||||||||||||||||||    
T  5679321 ttttatatcgttaactta---aaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattacttggt 5679225  T
Q  220 aaacaatttggtacacttg 238  Q
    |||| ||||||||||||||    
T  5679224 aaacgatttggtacacttg 5679206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 25121227 - 25121322
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| ||||||||||||||||||||||||| ||||||  | ||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaacgatttggaacactt 25121322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 24639336 - 24639415
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaa 106  Q
    ||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  24639336 gggattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaaa 24639415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 17955044 - 17955246
Alignment:
Q  48 cgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac--------------ttttatatcgtc 131  Q
    |||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||  |||              ||||||||||||    
T  17955044 cgctgcttgcttttctgcaaccaaatcaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaacccatcactcttttattttatatcgtc 17955142  T
Q  132 aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggt 231  Q
    ||||||   ||||| |||||||||  |  || |||||||||||||   | |||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  17955143 aactta---aaataagtaacgcgagctagttagacgaaacgacaaatccaatggatacgatactttacttatcactttagtacttggtaaacgatttggt 17955239  T
Q  232 acacttg 238  Q
    |||||||    
T  17955240 acacttg 17955246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 25121101 - 25121186
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| |||||||||||||||| ||||||||| ||||| |||||| ||| |||||||||||||||||||||||| |||||||||    
T  25121101 ggggattcgaagaatcctaaccgctgcttacttttctgcaatcaaaacgggt-aacttgctctgttgcaaacagatagaaattgcaa 25121186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 8969722 - 8969819
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||| |||||||||||||||||||||||||| |  | |||||| | ||||||||| ||||||||||||| ||||| |||||||||||||||    
T  8969722 aaaataagtaacacgaattgtttggacgaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaaataatttggtacacttg 8969819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 26115780 - 26115865
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||  |||||||||||||||| || || ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  26115780 ggggatttgaagaatcctaaccgctgctaacatttatgcaaccaaaacaggt-aacttactctgttgcaaacagataaaaattgcaa 26115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 11700571 - 11700667
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||| | ||||||||  |||||| |||||||  | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  11700571 aaataggtaacacaaattgtttaaacgaaaagacaatct-tgtggatacgatactctatttatcattttattacttggtaaacaatttggtacacttg 11700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 19636586 - 19636682
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||| |||||  |||||||||||| |||||||||||| |||| ||||| |||||||||||| ||||||||||||| || ||| |||||||||||||    
T  19636586 aaaataagtaacatgaattgtttggatgaaacgacaatccctatagatacaatactctacttaccactttattactttgt-aacgatttggtacactt 19636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 9737512 - 9737608
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactt-----atcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||| |||||||| ||||||  | |||||||||||||||||||     |||||||||||||||||||||| |||||||||||||||    
T  9737512 taacgcaaattgtttagacgaaactacaatccatgtggatacgatactctactttactgatcactttattacttggtaaacgatttggtacacttgc 9737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 12406576 - 12406720
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| ||||||||||||||||  |||||||  ||||||| |||||||||||| | ||||| ||||||||| | ||||||| ||| || |||||||    
T  12406576 aggggattcgaagaatcctaaccgctgtttactttcctgcaaccaaaaacaggtaaattcgctctattgcaaaca-aaaaaaatt-caa-ctcactttta 12406672  T
Q  125 tatcgtc--aacttacaaaaatatgtaacgcgaattgtttggacgaaa 170  Q
    |||||||  |||||||||||||| |||||  |||||||| ||||||||    
T  12406673 tatcgtcaaaacttacaaaaataagtaacaagaattgttcggacgaaa 12406720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 40227875 - 40227777
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| ||||||||||||||||||| ||||| |||||  |||||||||| ||| |  |||||||||||||||||||||| ||| ||||||||||||||    
T  40227875 aaaaataagtaacgcgaattgtttggatgaaactacaattcctatggatacaata-ttaacttatcactttattacttggt-aacgatttggtacacttg 40227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 11933517 - 11933419
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||| ||||||||||||||||||||||  | |||  ||||||||| ||||||||||| |||||||||||||| ||| || ||||||||    
T  11933517 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttggtaaacgattaggaacacttgc 11933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 19929699 - 19929774
Alignment:
Q  164 gacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||  | |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  19929699 gacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaatgatttggtacacttgc 19929774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 19374828 - 19374909
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  19374828 aattgtttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatttggtacactt 19374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 24639469 - 24639535
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    |||||||||||| |||||| ||||  | |||||||||||||||||||||||||||||||||||||||    
T  24639469 aattgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 24639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 11521192 - 11521288
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| |||| | |||| |||| || ||||||||||||  | || |||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  11521192 aaataagtaatgtgaatagtttagaagaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatttggtacactt 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 12761469 - 12761390
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaa 106  Q
    ||||||||||||||||| |||||||| || || || ||||||||||||||||| |||||||| ||||||||||| ||||||    
T  12761469 aggggattcaaagaatcataaccgctgctaacattgttgcaaccaaaacaggt-aacttgctttgttgcaaacaaataaaa 12761390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 15047210 - 15047130
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||| |||||||||| ||||  | | |||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  15047210 ttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactt 15047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 15107214 - 15107294
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||| |||||||||| ||||  | | |||||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  15107214 ttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactt 15107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 9052772 - 9052674
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||| |||||||||||  ||||| ||||||  |  ||||||||||||||||||| || ||||||||||||||||  |||||||||||||||    
T  9052772 aaaataagtaacgtgaattgtttggttgaaacaacaatctttgcggatacgatactctactta-cattttattacttggtaaatgatttggtacacttgc 9052674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 20829739 - 20829837
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||| || |||| |||| ||||||| ||||||  | ||||||| |||||| | |||||||||||||||||||||||| |||||||||||||||    
T  20829739 aaaataagtaatgcaaattttttgaacgaaacaacaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacacttgc 20829837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 9264912 - 9264966
Alignment:
Q  59 tttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||    
T  9264912 tttttgcaatcaaaacacgtaaactttctctgttgcaaacagataaaaattgcaa 9264966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 19900649 - 19900580
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||  | || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19900649 aacgacaatctttgtgaatatgatactctactta-cactttattacttggtaaacaatttggtacacttgc 19900580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 26115917 - 26116001
Alignment:
Q  153 cgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||| || ||| ||| |||||||||| ||||| ||||||||||||||    
T  26115917 cgaattgtttggaagaatcgacaatccttatggatacgatactttaatta-cacgttattacttgataaacgatttggtacacttg 26116001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 11094054 - 11093966
Alignment:
Q  149 aacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||| ||||||||||   |||||||||||| || |||||| || ||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  11094054 aacgtgaattgtttgattgaaacgacaatctctgtggatatgacactctacctatcattttattacttggtaaacgatttgatacactt 11093966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 12578177 - 12578223
Alignment:
Q  63 tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  12578177 tgcaaccaaaacaggtaa-cttgctctgttgcaaacagataaaaattg 12578223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 22526436 - 22526369
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||||||||   | ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  22526436 gaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatttggtaca 22526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 14649129 - 14649036
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||| ||| ||||||||||||| ||||||||| |  || ||||| | ||||||||| || |||| |||||||||||||||||||||||||||||    
T  14649129 atataaacagggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaa-cttgctctgttgcaaacagataaaaattg 14649036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 5679427 - 5679344
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttactttttt-gcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||| ||||||  ||| ||||||||||| |||||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  5679427 ggattcaaagagtcctaatggctgcttactttttttgcaaccaaat-aggtaa-cttgctctgttacaaacagataaaaattgcaa 5679344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 22218642 - 22218694
Alignment:
Q  181 tatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  22218642 tatggatacgatactctactta-cactttattacttgataaacaattttgtaca 22218694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 3774923 - 3774825
Alignment:
Q  142 aatatgtaacgcgaattgtttggacgaaacgaca--atcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||| |||||||||||| |||||||||  ||   | |||||| ||||||||||||  ||||||||||||| |||||||||||| |||||||||    
T  3774923 aataagtaacgtgaattgtttggatgaaacgacacaattcatgtggatatgatactctacttg-cactttattacttagtaaacaatttgatacacttgc 3774825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 12318481 - 12318433
Alignment:
Q  191 atactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  12318481 atactctacttatcactttattacttggttaatgatttggtacacttgc 12318433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 22357515 - 22357632
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgata---ctctacttatcactttattactt 216  Q
    |||||||||||||||||    ||||| ||||| |||| |||||  | ||||||||||||  | |||||||||||   || ||||||||||||||||||||    
T  22357515 ttttatatcgtcaacttt---aaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcactttattactt 22357611  T
Q  217 ggtaaacaatttggtacactt 237  Q
    ||||||  |||| ||||||||    
T  22357612 ggtaaatgatttagtacactt 22357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 23080439 - 23080343
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| ||||||| ||||||||||  ||||||||||||  | || |||| ||| |||||||||||| |||||| ||||||||  |||| ||||||||    
T  23080439 aaataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatcaccttattatttggtaaattatttagtacactt 23080343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 40228000 - 40227917
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    |||||||||| |||||||||||||| |||| ||||  ||||| ||||  |||||||||| ||| |||||||||||||||||||||    
T  40228000 ggggattcaa-gaatcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagataaaaattg 40227917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 17275896 - 17275833
Alignment:
Q  159 gtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    |||| |||||||| |||||  |||||||||||||| |||| |||||||||||||| ||||||||    
T  17275896 gtttagacgaaacaacaatttctatggatacgatattctaattatcactttattatttggtaaa 17275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 19374694 - 19374772
Alignment:
Q  34 caaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||  | ||||| ||| |||||||||||||||| |||||||| || |||||||| |||||| ||||||    
T  19374694 caaagaatcctaaccaatgcttacatttctgcaaccaaaacaggt-aacttgctttgctgcaaacatataaaatttgcaa 19374772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 21323787 - 21323833
Alignment:
Q  63 tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  21323787 tgcaaccaaaacaggtaa-cttgctctgttgcaaatagataaaaattg 21323833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 10107080 - 10107011
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||| |||||||||  |||||||||||  || ||||||||||||||||| ||||| |||||||||    
T  10107080 aacgacaatccctatggatagaatactctacttg-caatttattacttggtaaacgatttgctacacttgc 10107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 43941811 - 43941880
Alignment:
Q  164 gacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtac 233  Q
    |||||||| ||||||  | |||||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  43941811 gacgaaacaacaatctatgtggataggataccttacttatcactttattacttgataaataatttggtac 43941880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 13587270 - 13587231
Alignment:
Q  200 ttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  13587270 ttatcactttattatttggtaaacgatttggtacacttgc 13587231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 1833648 - 1833682
Alignment:
Q  195 tctacttatcactttattacttggtaaacaatttg 229  Q
    ||||||||||||||||||||||||||||| |||||    
T  1833648 tctacttatcactttattacttggtaaacgatttg 1833682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 12839823 - 12839877
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||||||| ||||| ||||||| ||||||| | |||| ||||||||    
T  12839823 tggatacgatactctacctatcattttattaattggtaagcgattttgtacactt 12839877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 20317824 - 20317877
Alignment:
Q  186 atacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    ||||||||||||||||| || |||||||| ||||||||||||| ||| |||||||    
T  20317824 atacgatactctactta-cattttattacatggtaaacaatttagtatacttgct 20317877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 23644995 - 23644945
Alignment:
Q  31 attcaaagaatcctaaccgcttcttactttttt-gcaaccaaaacaggtaa 80  Q
    |||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  23644995 attcgaagaatcctaaacgctgcttactttttttgcaaccaaaacaggtaa 23644945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 40215361 - 40215414
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||| ||||||||  ||||||||| |||||||||||| ||||||||||    
T  40215361 tggatacgataatctacttaa-actttattatttggtaaacaatctggtacactt 40215414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 11700452 - 11700520
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaaca 99  Q
    |||||||||||||||||||||  || ||  || ||||| ||||| ||| |||||||||||||||||||||    
T  11700452 gattcaaagaatcctaaccgccgctaac-attctgcaatcaaaataggcaaacttgctctgttgcaaaca 11700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 10589781 - 10589730
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    |||||||||| || | ||||||| |||| ||||||||||||||||||||||||    
T  10589781 aacgacaatccctgttgatacgacactc-acttatcactttattacttggtaa 10589730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 21488 - 21276
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatat 127  Q
    ||||||| ||||||||||| |||| ||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||     
T  21488 gggattcgaagaatcctaatcgctacttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattgcaacttaacttttatac 21389  T
Q  128 cgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaat 226  Q
    |||| ||||||||||||||||||||  |||||||| |||||||| ||||||| || |||||| ||||||||||||||||||||||||||| || ||| |     
T  21388 cgtcaaacttacaaaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattactttgttaacga- 21290  T
Q  227 ttggtacacttgct 240  Q
    ||||||||||||||    
T  21289 ttggtacacttgct 21276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 25200 - 24987
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||  |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  25200 aggggatttgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaacttaacttttat 25101  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    | |||| |||||||||||||| |||||   |||||||||||||||  ||||||  || || ||||||||||| |||||||| |||| ||||| || |||     
T  25100 accgtcaaacttacaaaaataagtaacaataattgtttggacgaacagacaattcctgtgtatacgatactcaacttatcattttaatactttgttaacg 25001  T
Q  225 atttggtacacttgc 239  Q
    | |||||||||||||    
T  25000 a-ttggtacacttgc 24987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 81)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 25782013 - 25781796
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||||||| ||||||||| ||||||||||||  ||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25782013 atatatacagaggggattcgaagaatcctaactactgtttacttttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaacc 25781914  T
Q  116 taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||     |  |||||||| |||| |||||| |||||||||    
T  25781913 taacttttataccatcaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaat-----tccatacgatattctatttatcattttattact 25781819  T
Q  216 tggtaaacaatttggtacacttg 238  Q
      |||||| ||||||||||||||    
T  25781818 cagtaaacgatttggtacacttg 25781796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 29 - 239
Target Start/End: Original strand, 27737565 - 27737788
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaacttttat 125  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||  ||||    
T  27737565 ggattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaacccttat 27737664  T
Q  126 ----------atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
              |||||||||||||||||||| ||||||||||||||||||||||||| ||||||  | ||| || ||||||||||||||||||||||||||    
T  27737665 ctttcattttatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattact 27737764  T
Q  216 tggtaaacaatttggtacacttgc 239  Q
    |||||||| |||| ||||||||||    
T  27737765 tggtaaacgatttagtacacttgc 27737788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 28 - 237
Target Start/End: Original strand, 23844340 - 23844562
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac----ctaac---- 119  Q
    ||||||| || ||||||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    |||||        
T  23844340 gggattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaacatttctaaccctt 23844439  T
Q  120 -----ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
         |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || | |||| |||||||||||||||| ||||||||    
T  23844440 ttatcttttatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattac 23844539  T
Q  215 ttggtaaacaatttggtacactt 237  Q
    ||||||||| |||||||||||||    
T  23844540 ttggtaaacgatttggtacactt 23844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 21841563 - 21841787
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||||||| ||||||||| ||||||||||||| || |||  ||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  21841563 atatatacagaggggattcgaagaatcctaaccactacttcatttcttgcaaccaaaacaagtaaacttgctttgttgcaatcagataaaaattgcaacc 21841662  T
Q  116 taacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    ||||||||||| |||| |||||||||||||| |||||  ||| |||| |||||||| |||||||  | ||||| | | |||||||||||| |||||||||    
T  21841663 taacttttataccgtcaaacttacaaaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatctctttattac 21841762  T
Q  215 ttggt-aaacaatttggtacacttgc 239  Q
    ||| | |||||| |||||||||||||    
T  21841763 ttgatgaaacaa-ttggtacacttgc 21841787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 24657342 - 24657532
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||   |||||    
T  24657342 aggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaatttcaactta--ctttat 24657439  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | |||| |||||||||||||| |||||  |||||||| ||||||||  |||||| || |||||||||||||| |||||||| |||||||||||    
T  24657440 accgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttattacttg 24657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 9516998 - 9516786
Alignment:
Q  39 aatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct-------------aacttttat 125  Q
    ||||||||  ||| |||| |||| ||||| ||||| ||||||||||||| |||||| ||||||||||| || ||||||             | |||||||    
T  9516998 aatcctaatggctgcttaattttctgcaatcaaaataggtaaacttgctatgttgctaacagataaaacttacaacctttctaacccttttatcttttat 9516899  T
Q  126 atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaa 225  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||| |    
T  9516898 atcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacga 9516799  T
Q  226 tttggtacacttg 238  Q
    |||||||||||||    
T  9516798 tttggtacacttg 9516786  T

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Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 11136123 - 11135943
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttactttttt-gcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttt 123  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||    
T  11136123 aggggattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaacctaactttt 11136024  T
Q  124 atatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttat 203  Q
    ||| |||| ||||||||||||||  ||||   |||| ||  ||||||| ||||||| || |||||||||||||||||||||    
T  11136023 ataccgtcaaacttacaaaaataattaacaataattattcagacgaaaggacaatctctgtggatacgatactctacttat 11135943  T

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Target: chr6; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 27124361 - 27124589
Alignment:
Q  19 atatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----- 113  Q
    ||||| |||||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| ||         
T  27124361 atatataaggggattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaattggaagtctt 27124460  T
Q  114 ------cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcact 207  Q
          | ||  |||||||||||||| || |||||||| |||||| ||||||||||  |||||||||||||  | | ||||||||| | || ||||||||    
T  27124461 ttaacccttatgttttatatcgtcaagtt-caaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcact 27124559  T
Q  208 ttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||||||| |||||||||||||    
T  27124560 ttattacttggtaaacgatttggtacactt 27124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 5624862 - 5624640
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct-----------a 117  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||| | |||||||| ||||| || |||||||||||||||||||||||           |    
T  5624862 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaact-gctctattacaaacagataaaaattgcaacctttctaaccctta 5624764  T
Q  118 acttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatgg-atacgatactctacttatcactttattact 215  Q
    |||||| ||||||||| |||||||||||| ||||||| ||||||||| || ||||||||||| |||| | ||| ||||||||||||||||||||||||||    
T  5624763 acttttctatcgtcaaacttacaaaaataagtaacgcaaattgtttgcacaaaacgacaatctctattgtataagatactctacttatcactttattact 5624664  T
Q  216 tggtaaacaatttggtacacttgc 239  Q
    |||||||| |||||||||| ||||    
T  5624663 tggtaaacgatttggtacatttgc 5624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 22813605 - 22813786
Alignment:
Q  37 agaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtc-aact 135  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||  ||| |||     
T  22813605 agaatcataaccgctacttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaattgcatcctaacttttatactgtcaaacc 22813704  T
Q  136 tacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
     ||||||||| |||||  |||||||| ||| |||| ||||||| |||| ||||| ||||  ||||||||||| |||||||||    
T  22813705 gacaaaaataagtaacaagaattgttcggatgaaaggacaatccctatagatacaatacattacttatcactatattacttg 22813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 23231859 - 23232066
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa---------cc-- 115  Q
    |||||||| ||||||||||| || | ||||||||| |  |||||||||| ||||| |||||||||||||||||||||||| ||||||         ||      
T  23231859 ggggattcgaagaatcctaaacgttgcttacttttctataaccaaaacaagtaaatttgctctgttgcaaacagataaaa-ttgcaagacttctaaccgt 23231957  T
Q  116 taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||   |||||||| ||||| |||||||||||||||||||    
T  23231958 taacttttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttattac 23232057  T
Q  215 ttggtaaac 223  Q
    |||||||||    
T  23232058 ttggtaaac 23232066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 217
Target Start/End: Original strand, 22412940 - 22413126
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgt 130  Q
    |||| |||||||||||||||| ||||||||  || |||||||||||||||| | |||||||| ||||||||||||| ||||||| | ||||||||| |||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaaccaaaacaggtaaattcgctctgttacaaacagataaaagttgcaacat-acttttataccgt 22413038  T
Q  131 c-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | |||||||||||||| |||||  |||||||| ||||||||  ||||||  | | ||||||||||||||||||| |||||||||||||    
T  22413039 caaacttacaaaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttataactttattacttg 22413126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 23009281 - 23009471
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||| |||||| ||||  |||||  | | ||||||||||||||||| ||||||||||||||||| ||||||| ||||| || ||||||||    
T  23009281 aggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaacaggtaaatttgctctgttgcaaacaaataaaaactgcaa-cttacttttat 23009379  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||||| |||||||||||||| |||||  ||||| |||||| |||| ||||||| || |||||||||| ||||||||||||||||| ||||||    
T  23009380 atcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatacttg 23009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 23779083 - 23778893
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||| |||||| ||||  |||||  | | ||||||||||||||||| ||||||||||||||||| ||||||| ||||| || ||||||||    
T  23779083 aggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaacaggtaaatttgctctgttgcaaacaaataaaaactgcaa-cttacttttat 23778985  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||||| |||||||||||||| |||||  ||||| |||||| |||| ||||||| || |||||||||| ||||||||||||||||| ||||||    
T  23778984 atcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcactttaatacttg 23778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 23645644 - 23645861
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------aac 119  Q
    |||||||||||| ||||||| || ||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||| ||         |||    
T  23645644 ggattcaaagaagcctaaccactgcttacttttatgcaaccaaaacatgtaa-cttgctctgttgcaaacaaataaaaattgcaatctctaaccctcaac 23645742  T
Q  120 ttttatatcgtcaactta-----caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    | || |||  | |  |||     ||||||||  |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23645743 tcttttatttt-attttattgttcaaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattac 23645841  T
Q  215 ttggtaaacaatttggtaca 234  Q
    ||||||||| ||||||||||    
T  23645842 ttggtaaacgatttggtaca 23645861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 9726120 - 9726022
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 9726022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 12183205 - 12183430
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    |||||||| |||||||||||||| | ||||||||| || ||||||||||||||| |||||| ||||||||||||||||| ||||||| ||              
T  12183205 ggggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggtaa-cttgctatgttgcaaacagataaacattgcaatctctaaccttta 12183303  T
Q  117 aact-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
    ||||       |||||||||||| ||||   ||||| |||||| |||||||| |||||||| |||||||  | ||||||||||||| |||||||||||||    
T  12183304 aactcttttattttatatcgtcacctta---aaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtacttatcacttt 12183400  T
Q  210 attacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||| |||||||||||||||    
T  12183401 attacttggtaaacgatttggtacacttgc 12183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 23143838 - 23143722
Alignment:
Q  122 ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||||||||||| || |||||  ||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||    
T  23143838 ttatatcgtcaacttacaaaa-taagtaacatgaattgtttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaa 23143740  T
Q  222 acaatttggtacacttgc 239  Q
    |  |||||||||||||||    
T  23143739 atgatttggtacacttgc 23143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 17729246 - 17729154
Alignment:
Q  145 atgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17729246 atgtaacgcgaatcgtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 17729154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 17826960 - 17827191
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||| ||||||| ||||||||||| ||||||| | ||||||||| ||||||||||| || ||||||| ||| ||||||||||| ||||||||||||||     
T  17826960 atataaacaagggaattcaaagaattctaaccgttgcttacttttctgcaaccaaaaacaagtaaact-gctatgttgcaaacatataaaaattgcaact 17827058  T
Q  116 -----------taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatc 204  Q
               || ||||||||| |||||   | ||||||| ||||||||||||||||||| ||||||||||||  | |||||||||||||||| ||||     
T  17827059 cttttaacccttatcttttatattgtcaaa--aaaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttata 17827156  T
Q  205 actttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||  ||||| | |||||||||||||    
T  17827157 actttattacttattaaacgagttggtacacttgc 17827191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 4339851 - 4339736
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||   || |||||| |||| |||||||| |||||| |||||||||||| | ||||||| ||||||||||||||||||||||| ||| |    
T  4339851 ttttatatcgtcaa---actaaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttgat 4339755  T
Q  220 aaacaatttggtacacttg 238  Q
    |||||||||||||||||||    
T  4339754 aaacaatttggtacacttg 4339736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 22410311 - 22410410
Alignment:
Q  122 ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||||||  |||||| |||||| |||||||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  22410311 ttatatcgtcaactta--aaaataagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaa 22410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 17299832 - 17299925
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||| ||||||| |||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatttgctaca 17299925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 21672309 - 21672534
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa---------cct- 116  Q
    ||||||| ||| | ||||||||||  ||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||||||||         |||     
T  21672309 ggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaa-cttgctcagttgcaaatagataaaaattgcaaatctctaatcctt 21672407  T
Q  117 -aacttttat------atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
     |||| ||||      |||||||||| | |||||   ||||| |||||||||||||||||| || ||||  | |||||||||||||||||||||||||||    
T  21672408 taactcttattattttatcgtcaactaaaaaaaa---gtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcacttt 21672504  T
Q  210 attacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||| ||||||| |||||||    
T  21672505 attacttggtaaacgatttggtgcacttgc 21672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 21907548 - 21907432
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||| ||||||||   || || ||||||||| || |||||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||    
T  21907548 ttttatatcatcaactta---aattaagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggt 21907452  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||||||| ||||||    
T  21907451 aaacgatttggtatacttgc 21907432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 15466460 - 15466370
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||| ||||||| ||||||| |||| ||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  15466460 taacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgta-cactttattacttggtaaacgatttggtacacttgc 15466370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 237
Target Start/End: Complemental strand, 24475277 - 24475053
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc------------ta 117  Q
    ||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||            ||    
T  24475277 gattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaagattgcaacctttctaacccttta 24475178  T
Q  118 acttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctac-----ttatcactttatt 212  Q
     ||||| ||||||||||||||||||||| ||  ||||  ||||||||||||||  |||||   | ||||| ||||||| |||     |||||| ||||||    
T  24475177 tcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaataacaattcttgtggatgcgatactatactataattatcattttatt 24475078  T
Q  213 acttggtaaacaatttggtacactt 237  Q
    ||||| ||||||||||  |||||||    
T  24475077 acttgataaacaatttaatacactt 24475053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 28933535 - 28933757
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaa-aacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac---- 119  Q
    ||||||||||||| |||||||||||  || |||||| |||||||| |||| |||| |||||||||||||||||||||||||||||||| ||  |||        
T  28933535 ggggattcaaagagtcctaaccgctgtttccttttt-gcaaccaagaacaagtaa-cttgctctgttgcaaacagataaaaattgcaatctctaaccctt 28933632  T
Q  120 ----------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
              ||||||||| ||||||||   ||||| | ||| | ||||||||||||||||||| ||||  | |||||||||||||||||||||||||||    
T  28933633 atctcttttattttatatcatcaactta---aaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcacttt 28933729  T
Q  210 attacttggtaaacaatttggtacactt 237  Q
    |||| ||| |||||||| ||||||||||    
T  28933730 attatttgctaaacaatatggtacactt 28933757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 2586810 - 2586721
Alignment:
Q  149 aacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||| |||||||||||||||||||| | ||||| | ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  2586810 aacgcgaattttttggacgaaacgacaatcattttggatgc-atactatacttatcacttcattacttggtaaacaatttggtacacttgc 2586721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 21679725 - 21679950
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa---------cct- 116  Q
    ||||||| ||| | ||||||||||  ||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||||||||         |||     
T  21679725 ggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaa-cttgctcagttgcaaatagataaaaattgcaaatctctaatcctt 21679823  T
Q  117 -aacttttat------atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
     |||| ||||      |||||||||| | |||||   ||||| |||||||||||||||||| || ||||  | |||||||||||||||||||||||||||    
T  21679824 taactcttattattttatcgtcaactaaaaaaaa---gtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcacttt 21679920  T
Q  210 attacttggtaaacaatttggtacacttgc 239  Q
    ||||||| |||||| ||||||| |||||||    
T  21679921 attacttagtaaacgatttggtgcacttgc 21679950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 21688795 - 21688892
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||| |||||||||||| |||||| | |||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| ||| |||||||||    
T  21688795 aaaataagtaacgcgaattttttggatgtaacgacaatccctatggatacaatactctacttatcacttgattacttagtaaacgattgggtacactt 21688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 22567956 - 22567840
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||| ||||||   ||||| |||||| || ||||||||||||||| ||||||  | ||||||| ||||| ||||| |||| ||||||||||||    
T  22567956 ttttatatcgttaactta---aaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggt 22567860  T
Q  220 aaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||    
T  22567859 aaacaatttggtacacttgc 22567840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 25927305 - 25927402
Alignment:
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||| |||||||||||||||||| | ||||  | ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgc 25927402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 19244667 - 19244601
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  19244667 ttgtttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaac 19244601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 7542962 - 7543059
Alignment:
Q  142 aatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| ||||||||||||||||||| ||||| ||| ||   || ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  7542962 aataagtaacgcgaattgtttggatgaaactacagtccacattgatacgatactttacttatcactttattacttggtaaacaatttgatacatttgc 7543059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 18075404 - 18075485
Alignment:
Q  156 attgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||| |||||||||||    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  18075404 attgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaacaatttcgtacactt 18075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 22566163 - 22566256
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||| ||||||||||||| || |||||| |||||||   | |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22566163 aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaaataatttggtaca 22566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 21932100 - 21932151
Alignment:
Q  188 acgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21932100 acgatactctacttatcactttattacttggtaaacaatttggtacacttgc 21932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 20005781 - 20005879
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||||| ||||||| |||||||| | ||| ||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  20005781 atatatacagaggggattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaa 20005879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 20005899 - 20005977
Alignment:
Q  160 tttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||||||||| ||||  | | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacacttg 20005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 25927184 - 25927265
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||| || || ||| || ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  25927184 attcaaagaatcctaaccgctactaacatttatgaaaccaaaacaggt-aacttgctctattgcaaacagataaaaattgcaa 25927265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 11177066 - 11176950
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||||||||||||| |||   ||||| ||||| |||||| ||| || |||||||||| |  | |||||||||||||||||||||||||||| |||| |||    
T  11177066 ttttatatcgtcaattta---aaataagtaacacgaattatttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagtactcggt 11176970  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| ||| |||||||||||    
T  11176969 aaacgattgggtacacttgc 11176950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 17382275 - 17382214
Alignment:
Q  45 aaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaa 106  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  17382275 aaccgctgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 9898958 - 9899057
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatc-actttattacttggtaaacaatttggtacacttg 238  Q
    |||||| |||||| |||| ||||| ||||||| |||||| |  ||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  9898958 aaaataagtaacgtgaatggtttgaacgaaacaacaatccccgtggatacaatactctacttttagactttattacttggtaaacaatttggtacacttg 9899057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20145106 - 20145159
Alignment:
Q  186 atacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20145106 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgc 20145159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 22187733 - 22187680
Alignment:
Q  186 atacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22187733 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgc 22187680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 24251608 - 24251515
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    |||||||||||||||||||| | ||||||| | || ||||| |||| |||| ||||| ||||||||||||||||||| | ||| ||||||||||    
T  24251608 gtaacgcgaattgtttggacaagacgacaaaccctgtggatgcgatcctctgcttatgactttattacttggtaaacgaattgatacacttgct 24251515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 8241333 - 8241277
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  8241333 tggatacgatactctacttatcactttcttacttcgtaaacgatttggtacacttgc 8241277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 14079491 - 14079543
Alignment:
Q  187 tacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  14079491 tacgatactctacttatcactttataacttggtaaacgatttggtacacttgc 14079543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 21907661 - 21907577
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||||||||||||| || ||||||||  || |||||||||||||||||   |  ||||||||||||||||||||||||||||||    
T  21907661 aaggggattcaaagagtcgtaaccgctgtttccttttttgcaaccaaaaatagctaacttgctctgttgcaaacagataaaaatt 21907577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 17883780 - 17883878
Alignment:
Q  135 ttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||||| || ||||| |||||||||||||||||| ||||||| || | ||| |||| ||||||| | ||| |||||||||||||||| ||||||||||    
T  17883780 ttacaaaagtaagtaacacgaattgtttggacgaaaggacaatccctgtcgatgcgatcctctactca-cacgttattacttggtaaacgatttggtaca 17883878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 9838580 - 9838499
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||  |||||||||||||  | ||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  9838580 ggggatttgaagaatcctaaccattgcttacttttctgcaaccaaaacgggtaa-cttgctcttttgcaaacagataaaaatt 9838499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 24215700 - 24215615
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||| ||  || || ||||||||||||||| |||| |||||| |||||| |||||| |||||||||||||    
T  24215700 ggggattcaaagaatcctaactgccgctaacatttttgcaaccaaaataggt-aacttgttctgtttcaaacaaataaaaattgcaa 24215615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 8039139 - 8039230
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| ||||||||||||| |||||||||||||       |||||||||| ||||| |||||||||||||||||||| |||||| ||||||||    
T  8039139 aaaataagtaacacgaattgtttggatgaaacgacaatca-------tacgatactccactta-cactttattacttggtaaacgatttggcacacttgc 8039230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 14637093 - 14637012
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaa 107  Q
    |||||||| ||||||||||  |||| ||||||||| ||||||| |||||||||||||||||||||||| ||  |||||||||    
T  14637093 ggggattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaa 14637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 14079336 - 14079420
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    |||| |||||| ||||||||| ||||||||| || ||||||||  ||| |||||| || ||||||||||||||||||||||||||    
T  14079336 attcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattgcaac 14079420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 20144995 - 20145083
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||||| |||||| ||| ||||| |||||| ||||  | |||||||| |||||||||||||| |||||||||||||    
T  20144995 aggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaa 20145083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 22187844 - 22187756
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||||| |||||| ||| ||||| |||||| ||||  | |||||||| |||||||||||||| |||||||||||||    
T  22187844 aggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaa 22187756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 1635183 - 1635110
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataa 104  Q
    ||||| ||||||||||||||||  |||||||| | ||||||||||| || |||||||| ||||||||||||||||    
T  1635183 gattcgaagaatcctaaccgctgtttacttttctacaaccaaaacatgt-aacttgctttgttgcaaacagataa 1635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 9838472 - 9838380
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    ||||||||||||||   || |||||| ||||||||| ||||||  || ||| |||||||  | ||||||| |||||||||||||||||||||||||    
T  9838472 ttttatatcgtcaa---actaaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 19244794 - 19244726
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacag 100  Q
    |||||||||||||| ||| || ||||||||| | |||||||| ||||| |||||||||||||||||||||    
T  19244794 attcaaagaatccttaccactacttacttttctacaaccaaaccaggt-aacttgctctgttgcaaacag 19244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 28586031 - 28586128
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| |||||| | ||||||| |  ||||||||||||  | | |||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  28586031 aaataagtaacgtggattgttttgttgaaacgacaatccatgtcgatatgatactctacttatcaatttattactcggtaaacgatttggtatacttg 28586128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 28589440 - 28589529
Alignment:
Q  150 acgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||| |||||  ||||||| ||||  | ||| ||||||||| ||||||||||||| ||| ||| ||||| |||||||||||||||    
T  28589440 acgcgaattttttggttgaaacgaaaatccatgtggctacgatactttacttatcactttgttatttgataaacgatttggtacacttgc 28589529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 24252131 - 24252186
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  24252131 cttacatttctgcaaccaaaacacg-aaacttgctctgttgcaaacagataaaaatt 24252186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 9386026 - 9385956
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||||  | ||||||||  |||||||||  |||||||||||||||||| ||||||||||||||||    
T  9386026 gaaacgacaatccatgtggatacgcgactctacttg-cactttattacttggtaaccaatttggtacacttg 9385956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 17382216 - 17382145
Alignment:
Q  168 aaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||| || | |||||||||||||||| |||||||||||  ||||||||| |||| ||||| ||||    
T  17382216 aaacgacaatccctgtagatacgatactctactcatcactttattcattggtaaacgatttagtacatttgc 17382145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 22410246 - 22410289
Alignment:
Q  70 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||| ||| |||||||||||||||||||||||||||||||||||    
T  22410246 aaaataggaaaacttgctctgttgcaaacagataaaaattgcaa 22410289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 8241482 - 8241414
Alignment:
Q  43 ctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| ||| ||||||||| | |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  8241482 ctaactgctgcttacttttctacaaccaaa-caggtaa-cttgctatgttgcaaacagataaaaattgcaa 8241414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 9898863 - 9898931
Alignment:
Q  54 ttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    |||||||| ||||||||||| |||||| |||| ||| ||||||||||||||||||||||| ||||| ||||    
T  9898863 ttacttttctgcaaccaaaataggtaa-cttgttct-ttgcaaacagataaaaattgcaatctaacattta 9898931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 15466577 - 15466509
Alignment:
Q  43 ctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||  |||||||| ||||||||||  |||||| ||||||||||||||||||||||||| ||||||    
T  15466577 ctaaccgctgtttacttttctgcaaccaaat-aggtaa-cttgctctgttgcaaacagataaaatttgcaa 15466509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 18075289 - 18075339
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaa 81  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  18075289 attcaaagaatcttaaccgctgcttacttttctgcaaccaaaacagataaa 18075339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 34478580 - 34478532
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggta 232  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  34478580 tggatacgatactctactta-cactttattatttggtaaacgatttggta 34478532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 6630569 - 6630652
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgc-aaacagataaaaattgcaa 113  Q
    ||||||||| |||||||||||  || | ||||||||||| ||||||||| ||||||||||||||| ||| | |||||||||||||    
T  6630569 attcaaagagtcctaaccgctatttccatttttgcaaccaaaaacaggt-aacttgctctgttgcaaaaaaaataaaaattgcaa 6630652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 24252227 - 24252287
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactcta 198  Q
    |||||||| |||||  ||||||||||||| |||||||||||  | ||||||||||||||||    
T  24252227 caaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 26215414 - 26215464
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||| ||||    
T  26215414 gaaacgacaatctatatggatacgatactctactta-cactttattatttgg 26215464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 4339950 - 4339877
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||| ||| ||||||  |||||||| |||||||||||||||| ||||||||  |||||||||| ||||| ||||    
T  4339950 aagaaccctgaccgctggttacttttctgcaaccaaaacaggt-aacttgcttagttgcaaacaaataaatattg 4339877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 6630675 - 6630773
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    |||||||| |||||||||   ||||| ||||||| |   |||| |||||||||||||||  | ||||| ||||||||||||||| |  ||||||||||||    
T  6630675 ttttatattgtcaactta---aaataagtaacgcaagcggtttagacgaaacgacaatctatgtggatccgatactctacttatta--ttattacttggt 6630769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 20002440 - 20002481
Alignment:
Q  198 acttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  20002440 acttatcactttattacttggtaattgatttggtacacttgc 20002481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 20722228 - 20722274
Alignment:
Q  191 atactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||  ||||||||||||||||||| |||||||||| ||||    
T  20722228 atactctactta--actttattacttggtaaacgatttggtacatttgc 20722274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 11177176 - 11177089
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| ||||| |||||||||||  || ||||| || ||| |||| ||||||| |||||| ||||||||||  |||||||||||||    
T  11177176 aggggatttaaagagtcctaaccgctgtttccttttatgtaacaaaaaacaggtaa-cttgctatgttgcaaacttataaaaattgcaa 11177089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 34092327 - 34092363
Alignment:
Q  201 tatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  34092327 tatcactttattacttggtaaacgatttgatacactt 34092363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 30411892 - 30411679
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    |||||||| || ||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30411892 ggggattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaacctatcttttat 30411793  T
Q  126 atcgtcaac-ttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |  |||||  ||||||||||| ||||||| ||||||| |||||||| ||||||| || | |||||||||||||||||||||||||||||| |||||||      
T  30411792 actgtcaaaattacaaaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattacatggtaaaag 30411693  T
Q  225 atttggtacacttg 238  Q
    |||| |||||||||    
T  30411692 atttcgtacacttg 30411679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 27908993 - 27909218
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    |||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |              
T  27908993 ggggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacgttctaaccctt 27909092  T
Q  117 --aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
      ||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||| | || |  | |||||||||||||||||||||||||||||||    
T  27909093 ttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttatta 27909192  T
Q  214 cttggtaaacaatttggtacacttgc 239  Q
    |||||||||| |||||||||||||||    
T  27909193 cttggtaaacgatttggtacacttgc 27909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 17349574 - 17349362
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc--taactt- 121  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  || |||     
T  17349574 aggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgcaacccttatcttt 17349475  T
Q  122 --ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
      ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  17349474 tattatatcgtcaacttac-aaaataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttggt 17349377  T
Q  220 aaacaatttggtaca 234  Q
    |||| |||| |||||    
T  17349376 aaacgatttagtaca 17349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 25530660 - 25530469
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttata 126  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| || |||||||||    
T  25530660 ggggattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa-cttacttttata 25530562  T
Q  127 tcgtc--aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
     | ||  |||| ||||||||| |||| | ||||| |  |||||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  25530561 ccatcaaaactcacaaaaataagtaatgagaattttacggacgaaaggacaatccctgtggatacgatactctacttatcactttattacttg 25530469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 29143184 - 29142983
Alignment:
Q  18 tatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    |||||||| ||||||||| ||||||| ||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  29143184 tatatacagaggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaacta 29143085  T
Q  117 aacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattact 215  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||| | |||||  |||||||  | |||||||| |||||||||||||  |||||||||    
T  29143084 aacttttataccgtcaaacttacaaaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctacttatcgttttattact 29142985  T
Q  216 tg 217  Q
    ||    
T  29142984 tg 29142983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 17743354 - 17743575
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc----------taa 118  Q
    |||||||| ||||||||||||  ||| ||||| | ||||||||| ||||||||||||||  |||||||| ||||||||||||||||           |||    
T  17743354 gattcaaataatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaactctctaacccttaa 17743453  T
Q  119 cttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||||||||||| || ||| |||||||| ||||| ||||||||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||    
T  17743454 cttttatatcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttg 17743553  T
Q  218 gtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||||||||    
T  17743554 gtaaacgatttggtacacttgc 17743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 25196226 - 25196011
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----------cc--taactttt 123  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||          ||  |||||| |    
T  25196226 aagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaaaatttcaagtctttttaaccattaacttat 25196127  T
Q  124 atatcgtcaacttac-aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||||||| ||||| | || |||||| |||||||||||||||||||||||||||||||||    
T  25196126 atatcgtcaacttaataaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttggtaaa 25196027  T
Q  223 caatttggtacacttgc 239  Q
    | | |||||||||||||    
T  25196026 cga-ttggtacacttgc 25196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 25920480 - 25920303
Alignment:
Q  25 aaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttt 123  Q
    |||||||||||||||||| ||| | || || |||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  25920480 aaggggattcaaagaatcataatcactgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaac-taactttt 25920382  T
Q  124 atatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
    |||  ||||||||||||||||| |||||| |||||||| |||||||| |||||||  | ||||||||||||||||||||    
T  25920381 ataatgtcaacttacaaaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctactta 25920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 25535496 - 25535296
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    ||||||| | |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| |  | |||||||||| ||||||||||||||| ||    
T  25535496 atatatagagggggattcgaagaatcccaaccgctgcttacttttttgcaaccaaaacaggtaaattcacgctgttgcaaatagataaaaattgcaa-ct 25535398  T
Q  117 aacttttatatcgtcaa--cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
     ||||||| | ||||||   | ||||||||| |||||  |||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  25535397 tactttta-accgtcaaagttcacaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattac 25535299  T
Q  215 ttg 217  Q
    |||    
T  25535298 ttg 25535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 29719105 - 29719330
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaa-acaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaactt 121  Q
    ||||||||| |||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||   |||||      
T  29719105 aggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactctctaaccc 29719204  T
Q  122 ttatat----------cgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
    ||||||          ||||||  ||  |||||| ||||||||||||||||| ||||||||||||||  | ||||||||||| |||||||||||||||||    
T  29719205 ttatattttattataccgtcaaacta--aaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttat 29719302  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||| |||||||||||||||    
T  29719303 tacttggtaaacgatttggtacacttgc 29719330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 26603234 - 26603449
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac--ctaactttt 123  Q
    |||||||| |||||||||||||||| ||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||| |||||    
T  26603234 ggggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaact-gctctgttgcaaacagataaaaattgcaacatctatctttt 26603332  T
Q  124 at---atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggta 220  Q
    ||   | ||||||    |||||||| ||||||  ||||||||| |||||| |||||||  |||  |||||||||||||||||||||||| ||||||| ||    
T  26603333 atcataccgtcaaac--caaaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcacttttttacttgata 26603430  T
Q  221 aacaatttggtacacttgc 239  Q
    |||||||||||||||||||    
T  26603431 aacaatttggtacacttgc 26603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 32085687 - 32085465
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------a 117  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||         |    
T  32085687 ggggatttaaagagtcctaaccgctgcttacttttctgcaaccaaaccaggtaa-cttgctctgttgcaaacagataaaaattgcaatctctaactctta 32085589  T
Q  118 act-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
    |||       |||||||||||||||||   ||||| ||||| |||  ||||| |||||||||||||||  | |||||| |||||||||||||||||||||    
T  32085588 actcttttattttatatcgtcaactta---aaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcacttta 32085492  T
Q  211 ttacttggtaaacaatttggtacactt 237  Q
    |||||||||||||||||||||||||||    
T  32085491 ttacttggtaaacaatttggtacactt 32085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 28925747 - 28925522
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc---------- 115  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |              
T  28925747 aggggattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaagctttctaaccc 28925648  T
Q  116 --taacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
      || ||||||||||||| ||||||||||||||  ||||  |||||||||||||||||||||||||    ||||||| |  |||||||||||||||||||    
T  28925647 tttatcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttatt 28925548  T
Q  213 acttggtaaacaatttggtacacttgc 239  Q
    ||||||| ||| |||| ||||||||||    
T  28925547 acttggt-aacgatttagtacacttgc 28925522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 25618780 - 25618574
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa---cctaactt-- 121  Q
    |||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||      
T  25618780 ggggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaaacagataaaaattgcaaatctctaactttt 25618681  T
Q  122 ----------ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
              ||||||||||||||   ||||||| || ||||||||||||| |||||||||||||||  | |||||| ||||||||||||||||||||||    
T  25618680 cactcttttattatatcgtcaact---aaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttat 25618584  T
Q  212 tacttggtaa 221  Q
    ||||||||||    
T  25618583 tacttggtaa 25618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 63 - 239
Target Start/End: Original strand, 17635685 - 17635874
Alignment:
Q  63 tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct-------------aacttttatatcgtcaacttacaaaaatatgta 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             | |||||| |||||||||||||||||||| |||    
T  17635685 tgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatcttttacatcgtcaacttacaaaaataagta 17635784  T
Q  150 acgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||| || || ||| ||||||||||||||| || |||||| ||| |||||||| || |||||||||||||||||| ||||| |||| ||||    
T  17635785 acgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttggtaaacgatttgctacatttgc 17635874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 45 - 237
Target Start/End: Original strand, 31804791 - 31804997
Alignment:
Q  45 aaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac----------ttttatatcgt 130  Q
    ||||||| ||||||||| ||||||||||| |||||||| ||||| | ||||||||| ||||||||||||||   |||||          | |||||||||    
T  31804791 aaccgctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactctctaacccttatcttttattatatcgt 31804890  T
Q  131 caacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttgg 230  Q
    ||||||||||||||| ||||| |  |||| |||||||||||| ||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  31804891 caacttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttgg 31804990  T
Q  231 tacactt 237  Q
    |||||||    
T  31804991 tacactt 31804997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 24090812 - 24091003
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| ||| ||||||||| || ||||||||| ||||||||||||||||||| | ||  | ||||||| | |||||||||||||| | | ||||||    
T  24090812 aggggattcgaagcatcctaaccactgcttacttttctgcaaccaaaacaggtaaattcgcagttttgcaaaaatataaaaattgcaacttca-ttttat 24090910  T
Q  126 atcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | |||||| |||||||||||| |||||  ||||||||||||||||| |||||||  | ||||||||||| |||| ||||||||||||||||||    
T  24090911 accgtcaaacttacaaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattacttg 24091003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 15339464 - 15339238
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac-- 119  Q
    ||||||||  |||||||||||| ||| ||||||||| |||||| |||| ||| |||||||||||||||||||||| ||||||||||||||   |||||      
T  15339464 aggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactctctaaccc 15339365  T
Q  120 --------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
            | ||||||| | ||||||||||  || ||||||| ||||||||||||||||||||||||  | |||||| |||||||||||| |||||||||    
T  15339364 ttatcttttattatatccttaacttacaaag-taagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctacttttcactttat 15339266  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||  |||||||||||||||    
T  15339265 tacttggtaaatgatttggtacacttgc 15339238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 17675519 - 17675729
Alignment:
Q  43 ctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc-------------taacttttatatcg 129  Q
    |||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||             || |||||| ||||    
T  17675519 ctaaccgctgtttatttttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatcttttacatcg 17675618  T
Q  130 tcaacttacaaaaatatgtaacgcga-attgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaattt 228  Q
    |||||||||||||||| |||||| ||  || ||| ||||||||||||||| || | |||| ||| |||||||| || |||||||||||||||||| ||||    
T  17675619 tcaacttacaaaaataagtaacgtgagttttttttgacgaaacgacaatctctgttgatatgattctctacttttctctttattacttggtaaacgattt 17675718  T
Q  229 ggtacacttgc 239  Q
    | |||| ||||    
T  17675719 gctacatttgc 17675729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 17198095 - 17197906
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| ||||||| |||||||| ||||||||| |||||||||||  |||| || | |||||| ||||||| ||||||| ||||    
T  17198095 aataaatatacagaggggattcgaagaatcttaaccgctgcttacttttctgcaaccaaaaataggtgaattcgctctgctgcaaactgataaaagttgc 17197996  T
Q  112 aacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
    ||| | |||||||||  ||||||||||||||||| | |||| |||||||| |||||||| ||||||| |  ||||||| ||||||||||||    
T  17197995 aac-tcacttttatactgtcaacttacaaaaataagaaacgagaattgttcggacgaaaggacaatctccgtggatacaatactctactta 17197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 20174618 - 20174732
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||| ||||||||   ||||| |||||  |||||||||||||||||||||||||  | |||| | ||||||||||||||||||||||||||||||    
T  20174618 ttttatatcatcaactta---aaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggt 20174714  T
Q  220 aaacaatttggtacactt 237  Q
    |||| |||||||||||||    
T  20174715 aaacgatttggtacactt 20174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 25888224 - 25888319
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||||||||||    |||||||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25888224 aaaataagtaacgcgaattgtttg----aaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgc 25888319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 45621880 - 45621978
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||| ||||| ||||||||||||||||||||||||||  | | ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactt 45621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 23933420 - 23933505
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||||    
T  23933420 ggggattcaaagaatcctaaccgctgcttacttttgtgaaaccaaaccaagt-aacttgctctgttgcaaacagataaaaattgcaa 23933505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 12953293 - 12953393
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| |||||||||||||||| |||||||||||||||  | |||| || ||||||||||||| ||||||||||||| ||||  ||||||||||||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttg 12953392  T
Q  239 c 239  Q
    |    
T  12953393 c 12953393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 26667520 - 26667339
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||| |||||||||||| | ||| ||||| |||          ||||||||  ||||| |    
T  26667520 aggggattcgaagaatcctaaccgctgtttacttttctgcaaccgaaaacaggtaaaatcgctatgttggaaa----------ttgcaacc--actttga 26667433  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    || |||||||||||||||||| |||||| |||||||| | |||||| || |||| || |||||||||||||||||||| | |||||||||||||    
T  26667432 taccgtcaacttacaaaaataagtaacgagaattgttcgtacgaaaggaaaatccctgtggatacgatactctacttactaactttattacttg 26667339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 28770444 - 28770543
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    ||||| ||| || |||||||||||| |||| |||| |  |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||    
T  28770444 aaataagtagcgtgaattgtttggatgaaaagacattacctatggatacgatactctacttatcactttattatttggtaaaggatttggtacacgtgct 28770543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 45553352 - 45553268
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||||||| || || || | ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  45553352 ggggattcaaagaatcctaaccgctgctaacgttct-gcaaccaaaacaggtaa-cttgctatgttgcaaacagataaaaattgcaa 45553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 8503077 - 8503169
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| ||||||||||  |||| |||||||  | |||||| ||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  8503077 gtaacgcaaattgtttggttgaaatgacaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacacttgc 8503169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 17890161 - 17890075
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    ||||||| |||||||| ||| || | ||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  17890161 ggggattgaaagaatcttaatcgttgcttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaacatataaaaattgcaac 17890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 23011771 - 23011861
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||| ||| |||||||||||  | ||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  23011771 taacgcaaattgtttagacaaaacgacaatccttgtggatacaataatctactta-cactttattacttggtaaaaaatttggtacacttgc 23011861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 45553221 - 45553130
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| ||||||| |||||| ||||||||||| || |  |||||||| | ||||||||||||||||||||| ||||| |||||||||||||||    
T  45553221 taacacgaattgcttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacacttgc 45553130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 30900851 - 30900937
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtac 233  Q
    |||||||||||||||| |||||||| |||||     ||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  30900851 gtaacgcgaattgtttagacgaaacaacaatatacgtggatacaatactctagttatcactttattatttggtaaacaatttggtac 30900937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 11382752 - 11382851
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| |||||||||||| |||||| ||||  |||||   | |||||| ||||||||||||||||||||||||  |||||||| ||||| ||||||||    
T  11382752 aaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcactttattatctggtaaacgatttgatacacttg 11382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 19200135 - 19200233
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||| | || ||||||||| ||||||||||||  | |||||||||||||| ||||||||| |||||| ||||||||  |||||||||||||||    
T  19200135 aaaataagtaatgtgagttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattattatttggtaaaagatttggtacacttgc 19200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 8447079 - 8447148
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||  | ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  8447079 aacgacaatccatgtggatacgataatctacttat-actttattacttggtaaacgatttggtacacttgc 8447148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 25885460 - 25885553
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||| ||||| | |||||||||||||||||||||||   | ||||||||||||| | |||||||| ||||||||| |||||| ||||||||||    
T  25885460 aaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattcttatcac-ttattactttgtaaacgatttggtaca 25885553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 9774334 - 9774414
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||| ||||||| ||||| |||||| |||||||||||  | |||||||||||||||||  ||||||||||| ||||||||    
T  9774334 aaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac--atcactttattccttggtaa 9774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 13776449 - 13776340
Alignment:
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |||||||||||||   ||||| |||||| |  |||||||||||||| |||||||  | |||||||||||||| |||||||||||||||| ||  |||||     
T  13776449 tatcgtcaactta---aaataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttattatttaataaacg 13776354  T
Q  225 atttggtacacttg 238  Q
    ||||| ||||||||    
T  13776353 atttgctacacttg 13776340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 25887778 - 25887864
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||  ||||||| ||| ||||  |||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  25887778 ggggatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggtaa-cttgctctgttgcaaacagataaaaattgcaa 25887864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 45621756 - 45621838
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||||||||||||||| |||||||  || ||  || ||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  45621756 aggggattcaaagaatcttaaccgccgctaac-attctgcaatcaaaacaagtaaacttgctatgttgcaaacagataaaaatt 45621838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 5777314 - 5777217
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||| |||||||||||||||||||||||||  ||| ||| ||||||| ||||||  ||||||||| ||| ||||| || || |||||||||    
T  5777314 aaataagtaacgtgaattgtttggacgaaacgacaatccatatagattcgatactttactta-aactttattatttgataaacgatatgatacacttgc 5777217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 17890027 - 17889938
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| |||||||||  ||||||||||||| ||||| ||| ||||| ||||||| |||| ||||| || |||||| ||||||||||||||    
T  17890027 taacgcaaattgtttgatcgaaacgacaatccctatgaatatgataccctactta-cactgtattatttagtaaacgatttggtacacttg 17889938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 9774152 - 9774221
Alignment:
Q  44 taaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||| | ||||||||| || ||| |||||||||||| ||||| |||| ||||||||    
T  9774152 taaccgcttcttacttttcttcaaccaaaatagataagcttgctctgttgtaaacatataacaattgcaa 9774221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 25939249 - 25939161
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacact 236  Q
    |||||| |||||||||||  ||||||| ||||  ||||||||||||||| |||||| |||||||||||||| ||||  || |||||||||    
T  25939249 gtaacgtgaattgtttggttgaaacgaaaatccttatggatacgatactttactta-cactttattacttgataaatgatgtggtacact 25939161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 27418465 - 27418389
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
    |||||| ||||| ||||||||||||  |||| || ||||  | |||||| |||||||||||||||||||||||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 32440040 - 32440095
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||| || ||| ||||||||| ||||||||||||||||||||||||||    
T  32440040 tggatacgatactttattta-cactttatttcttggtaaacaatttggtacacttgc 32440095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 13776519 - 13776476
Alignment:
Q  70 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13776519 aaaacaggtaatcttactctgttgcaaacagataaaaattgcaa 13776476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 12557752 - 12557807
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| |||||||| |||||||||||||||||||  |||||||||||||||    
T  12557752 tggattcgatattctactta-cactttattacttggtaaaagatttggtacacttgc 12557807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 29027690 - 29027635
Alignment:
Q  57 cttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| |||||||||| ||||| | |||||||| |||||||||||||||||||||||    
T  29027690 cttttctgcaaccaaatcaggtca-cttgctctcttgcaaacagataaaaattgcaa 29027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 11382680 - 11382713
Alignment:
Q  80 aacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||||||||||||||||| ||||||    
T  11382680 aacttgctctgttgcaaacagataaaatttgcaa 11382713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 20174512 - 20174591
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||||| |||| | ||||||||| ||||||||| |   |||||| |||||||  |||||||||||||||||||||||||||    
T  20174512 gggattcgaagagtgctaaccgctgcttacttttcttttaccaaa-caggtaat-ttgctctgttgcaaacagataaaaatt 20174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 27869852 - 27869800
Alignment:
Q  185 gatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||||||||||| | ||| |||||||||  ||||||||||||||||||||    
T  27869852 gatacgatactctactaa-cacattattacttaataaacaatttggtacacttg 27869800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 28606164 - 28606239
Alignment:
Q  123 tatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcacta-tggatacgatactctactt 201  Q
    |||||||||||||||   ||||| ||||||| |  ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  28606164 tatatcgtcaactta---aaataagtaacgccagctgtttagacgaaacgacaatc-ctagtggatacgatactctactt 28606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 21078641 - 21078685
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctac 199  Q
    ||||||||||||||||||||||||  | ||||| |||||||||||    
T  21078641 aattgtttggacgaaacgacaatccttgtggatgcgatactctac 21078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 29883256 - 29883224
Alignment:
Q  207 tttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||| ||||||||||    
T  29883256 tttattacttggtaaacaatttagtacacttgc 29883224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 15375769 - 15375981
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    |||||||| |||||||||||||| | ||||||||| |||||||||||  |||  |||||||||||||||||||| ||||||||||||| |||| ||||||    
T  15375769 ggggattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaatctaa-ttttat 15375867  T
Q  126 atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaa 225  Q
    | ||||||||| |||||||| |||| || |||| ||||||||||||||||||| || |||||| |||||||||||||||| ||||||| ||||||||| |    
T  15375868 accgtcaacttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacga 15375967  T
Q  226 tttggtacacttgc 239  Q
    ||||||||||||||    
T  15375968 tttggtacacttgc 15375981  T

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Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 23388723 - 23388935
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||||||||||| ||| |||   ||| | ||| |||| |||||||| | |||||||||||||||||| |||||||||||||||||||||     
T  23388723 aggggattcgaagaatcctaactgctgctttactttctccaatcaaagcaggtaaattcgctctgttgcaaacagatgaaaattgcaacctaacttttac 23388822  T
Q  126 atcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    | |||||| |||||||||||| |||||  |||||||| |||||||| |||||||  | ||||||||||||||||||||||||||||||||||||| ||||    
T  23388823 accgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggttaaca 23388922  T
Q  225 atttggtacacttg 238  Q
    | ||||||||||||    
T  23388923 a-ttggtacacttg 23388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 24140651 - 24140443
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc-----taacttttatatcgt 130  Q
    |||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||| ||       ||||  |||||||||    
T  24140651 aagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaattggaagtctctttaacccttatatcgt 24140552  T
Q  131 caacttac-aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttg 229  Q
     ||||||  |||||||||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||||||||||||||||||||||||| | |||    
T  24140551 taacttaataaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaacga-ttg 24140453  T
Q  230 gtacacttgc 239  Q
    ||||||||||    
T  24140452 gtacacttgc 24140443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 28664987 - 28664796
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| ||||||| |||||| | |||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||| || ||| ||||||    
T  28664987 aggggattcgaagaatcttaaccgttgcttatttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcgacttaa-ttttat 28664889  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    | |||| ||||| |||||||| |||||| |||||||| | |||||| |||| || ||||| ||||||||||||||||||||||||||||||||    
T  28664888 accgtcaaacttgcaaaaataagtaacgagaattgttcgcacgaaaggacagtccctatgaatacgatactctacttatcactttattacttg 28664796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 20315305 - 20315528
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa------------cc 115  Q
    ||||||| ||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||            |     
T  20315305 gggattcgaagaaccctaatcgcttcttactattttgcaaccaaaacatgtaaacttgctttgttgcaaacagataaaaattgcaagtttctttatccct 20315404  T
Q  116 taacttttatatcgtcaacttac-aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    ||| ||||||||||||||||||  ||||||| || ||||||||||||||||||||| || ||||  | |||||||||||||||||||||||| |||||||    
T  20315405 taaattttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattac 20315504  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||||||| | |||||||||||||    
T  20315505 ttggtaaacga-ttggtacacttgc 20315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 24245408 - 24245642
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    ||||| ||| |||||||| |||||||||||||| | ||||||||| |||||| |||||||||||||||||| ||||| ||||| |||||||| | |||||    
T  24245408 atataaacagggggattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaatcgaaacct 24245507  T
Q  117 -------------aacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttat 203  Q
                 | |||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||    
T  24245508 ttctaacccttttatcttttatattctcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttat 24245607  T
Q  204 cactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||| |||||| | |||||  |||||||    
T  24245608 cactttattacatggtaagcgatttgtgacacttg 24245642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 17432108 - 17431884
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac--- 119  Q
    |||| |||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| ||||    ||||       
T  17432108 agggtattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaattacaactctttaaccct 17432009  T
Q  120 ----ttttatatcgtc--aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
        |||||||||| |  |||||| ||||||| ||| || || ||||||||| |||||||||||| || |||||||||||||||||||  ||||||||||    
T  17432008 tatattttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttatta 17431909  T
Q  214 cttggtaaacaatttggtacacttg 238  Q
    |||||||||| |||| |||||||||    
T  17431908 cttggtaaacgatttagtacacttg 17431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 20563969 - 20564158
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatc 128  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||||||| |    
T  20563969 gattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaa-ctcacttttatacc 20564067  T
Q  129 gtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    ||| |||||||||||||| |||||  |||  ||||||||||||  ||||||  | |||||||||||||||||||| | |||||||||||||    
T  20564068 gtcaaacttacaaaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctacttactaactttattacttg 20564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 20858896 - 20858707
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatat 127  Q
    ||||||| | |||||||||||||| ||||||||| ||||||||||| ||||||| | ||| |||||||||| ||||||||||| || || |||||||||     
T  20858896 gggattcgacgaatcctaaccgctgcttacttttatgcaaccaaaataggtaaattcgctttgttgcaaaccgataaaaattgtaa-cttacttttatac 20858798  T
Q  128 cgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||| |||||||||||||| |||||  |||||||| |||| ||| ||||||| |  ||||||||||||||||||||||| |||||||||||    
T  20858797 cgtcaaacttacaaaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttattacttg 20858707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 222
Target Start/End: Original strand, 17314986 - 17315182
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  | ||||| ||||||| |||||||||||| || ||  |||||||    
T  17314986 aggggattcaaagaatcttaaccgctgcttacttttttgcaaccaaaacaggtaacttcgctctattgcaaaaagataaaaattgtaa-ctttcttttat 17315084  T
Q  126 atcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    | |  | |||||||||||||| |||||  |||||||| ||| |||| |||||||  | ||||||||||||| ||||||||||||||||||||| ||||    
T  17315085 accaacaaacttacaaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattacttgataaa 17315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 19004146 - 19004325
Alignment:
Q  71 aaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc----------taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattg 159  Q
    |||||| ||||||||| |||||||||||||||||||||||||||           || ||||||||||||||| |||||||||||| |||||| ||||||    
T  19004146 aaacagataaacttgccctgttgcaaacagataaaaattgcaactatttaacccttatcttttatatcgtcaaacttacaaaaataagtaacgtgaattg 19004245  T
Q  160 tttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||| ||| |||||||  | |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  19004246 tttggacaaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacacttgc 19004325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 34128860 - 34128637
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa------------c 114  Q
    |||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||  | |||||| |||            |    
T  34128860 ggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaacaagtcaaaatttcaagtctttttaaccc 34128761  T
Q  115 ctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
     ||||||||||| | |||||||| ||||||| | |||| ||||| ||||||||||| ||||||  || ||||||||||| ||||||||||||||||||||    
T  34128760 ttaacttttataccttcaacttataaaaataagaaacgagaattttttggacgaaaggacaattcctgtggatacgatattctacttatcactttattac 34128661  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||| ||| | |||||||||||||    
T  34128660 ttggtcaacga-ttggtacacttgc 34128637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 20744545 - 20744699
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa----------ccta 117  Q
    ||||||| |||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||          | ||    
T  20744545 gggattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgcaaacagataaaaattgcaactctctaaccctta 20744644  T
Q  118 acttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaac 171  Q
    |||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||    
T  20744645 acttttatatcgtcaaacttacaaaaataagtaacgtgaaatgtttggacgaaac 20744699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 25550487 - 25550603
Alignment:
Q  122 ttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaa 221  Q
    ||||||||||||||||||||| || |||||  ||||||||||||||||| ||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  25550487 ttatatcgtcaacttacaaaa-taagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaa 25550585  T
Q  222 acaatttggtacacttgc 239  Q
    || ||||| |||||||||    
T  25550586 acgatttgatacacttgc 25550603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 20549591 - 20549766
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||| ||| |||||||||||||||| |||||||   ||||||||||| |||||||| |  |||||||| |||||| |||||||||||||   |||||||    
T  20549591 aggggtttcgaagaatcctaaccgctgcttacttgcctgcaaccaaaaacaggtaaaatcactctgttgtaaacaggtaaaaattgcaact--actttta 20549688  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
    || | | ||| |||||||||| |||||  |||||||| |||||||| ||||||| || ||||||||||||||||||||    
T  20549689 taccattaacctacaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctactta 20549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 16523676 - 16523852
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    |||||||||||||||||||||||||| ||||||||| |  ||| |||| |||||||| | ||||||||||||||||||||||||||||||   |||||||    
T  16523676 aggggattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaac--tactttta 16523773  T
Q  125 tatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
     |  ||| ||||||||||| || |||||   ||||||| |||||||| ||||| | || ||||||| ||||||||||||    
T  16523774 aactgtcaaacttacaaaactaagtaacaataattgttcggacgaaaggacaaaccctgtggatacaatactctactta 16523852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 36175354 - 36175135
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------aact 120  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||||||||||||||||| ||         ||||    
T  36175354 gattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggtaa-cttgctttgttgaaaacagataaaaattgcaatctctaaccctcaact 36175256  T
Q  121 tttatatcg---tcaact-tacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
     || |||     | || | | |||||||| |||||||   ||||||||||||||||||||||  |||||||||||||||||||  | |||||||||||||    
T  36175255 cttttatttattttaattgttcaaaaataagtaacgcatgttgtttggacgaaacgacaatccttatggatacgatactctac-aaacactttattactt 36175157  T
Q  217 ggtaaacaatttggtacacttg 238  Q
    ||||||| ||||||||||||||    
T  36175156 ggtaaacgatttggtacacttg 36175135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 238
Target Start/End: Complemental strand, 39434676 - 39434464
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa------------ccta 117  Q
    ||||| |||||||||||||| | ||||||||| ||||| ||||||||||||||||||        |||||||||||||||||||            | ||    
T  39434676 gattcgaagaatcctaaccgttgcttacttttctgcaaacaaaacaggtaaacttgc--------aaacagataaaaattgcaattctttttaaccctta 39434585  T
Q  118 acttttatatcgtcaacttac-aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
    |||||||||||||||| |||  ||||||| |||||||||||||||||||| ||| |||||||  | ||||||||||  ||||||||||| ||||||||||    
T  39434584 acttttatatcgtcaagttaataaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattactt 39434485  T
Q  217 ggtaaacaatttggtacacttg 238  Q
    ||||||| | ||||||||||||    
T  39434484 ggtaaacga-ttggtacacttg 39434464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 34487736 - 34487640
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||| |||||||||||||||| |||||||||||||||  | |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34487736 aaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttattacttggtaaacaatttggtacactt 34487640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 25402337 - 25402436
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||||  || |||||||||||||||| || ||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  25402337 aaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacacttgc 25402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 18208249 - 18208347
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||  ||||||||||||||||| |||||||  | |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  18208249 aaaataagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttattactttgtaaacgatttggtacacttgc 18208347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 18937846 - 18937748
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||| |||||||||||||||||| |||||| || || |||||||||| ||||||||||||||||||||  ||||| |||||||||||||||    
T  18937846 aaaataagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatact-tacttatcactttattacttaataaacgatttggtacacttgc 18937748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 22755605 - 22755522
Alignment:
Q  155 aattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||    
T  22755605 aattgtttggaagaaacgacaatccttatggatacgatactctacttatctcttcattacttggtaaacgattcggtacacttg 22755522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 24266955 - 24267053
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| |||||||||||||| ||| || ||||  | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  24266955 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 24267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 24343586 - 24343684
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| |||||||||||||| ||| || ||||  | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  24343586 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 24343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 15470021 - 15469936
Alignment:
Q  154 gaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||| ||||||||||||||   | |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  15470021 gaattgtttagacgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgc 15469936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 17171561 - 17171650
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||| || |||||||||||||||  | |||||||||| |||||||||||||||||||||||| ||||  |||||||||||||    
T  17171561 taacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacactt 17171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 17185561 - 17185464
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| |||||| |||||||||||  |||||||||||| || | ||||||||||||||||||||||||||||| ||||||||  |||| |||||||||    
T  17185561 aaatacgtaacgtgaattgtttggttgaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaaatgatttagtacacttg 17185464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 24260741 - 24260655
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||| ||||| |||||||| || || ||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  24260741 aggggattcaaggaatcataaccgctcctaacatttctgcaaccaaaataggtaa-cttgctctgttgcaaacagataaaaattgcaa 24260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 26120965 - 26120867
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||| |||| || ||||||||||||||||||||||||  | || ||| |||||||||||||  |||||||||| ||||||||||||||||||||||    
T  26120965 caaaaataagtaatgctaattgtttggacgaaacgacaatccttttgaatatgatactctactta-aactttattacatggtaaacaatttggtacactt 26120867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 15690877 - 15690780
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||| |||||| |||||| |||||||||||||||||     ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  15690877 aaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctacttatcactttatta-ttggtaaacgatttggtaaactt 15690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 19051672 - 19051551
Alignment:
Q  116 taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||| || |||| |||||||||||| |||||  ||||||||| || | ||| |||||| ||  |||||||| |||| |||||||||||||||||    
T  19051672 taacttttatgtcatcaaacttacaaaaataagtaacaagaattgtttagatggaacaacaatccctg-ggatacgacactcaacttatcactttattac 19051574  T
Q  215 ttggtaaacaatttggtacactt 237  Q
    || |||||| |||||||||||||    
T  19051573 tttgtaaacgatttggtacactt 19051551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24852173 - 24852271
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||| ||||||||| |||||||| ||||||  | ||||||||||||| ||||||||| ||||||||||||||| | |||| ||| ||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatttagtagacttgc 24852271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 23380284 - 23380356
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||  |||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  23380284 gaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgc 23380356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 19086230 - 19086276
Alignment:
Q  191 atactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19086230 atactctacttatcactttattacttggtaaacgatttggtacactt 19086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 19283839 - 19283952
Alignment:
Q  121 tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggta 220  Q
    |||||||||||||||||   ||||| || | || ||||||||||||||||||  |||   | ||||||| ||||||||||||||||||||||| ||||||    
T  19283839 tttatatcgtcaactta---aaataagttaagcaaattgtttggacgaaacgttaattcttgtggatacaatactctacttatcactttattatttggta 19283935  T
Q  221 aacaatttggtacactt 237  Q
    ||| |||| || |||||    
T  19283936 aacgatttagtgcactt 19283952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 26121198 - 26121280
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||||||||||||||||| || ||||||||| || ||||||||   |  |||||||||| |||||||||||||||||||    
T  26121198 ggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagataacttgctctcttgcaaacagataaaaatt 26121280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 26835872 - 26835796
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaa 105  Q
    ||||||| |||||||||||| ||| | ||||||| |||||| |||||||||||| | |||||||||||||||||||||    
T  26835872 gggattcgaagaatcctaactgctgcatacttttctgcaac-aaaacaggtaaattcgctctgttgcaaacagataaa 26835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 15544120 - 15544051
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||| ||||||||||||||| | || ||||||||||||||||| |||||||||||||||    
T  15544120 aacgataatccctatgtatacgatactctactga-cagtttattacttggtaaacgatttggtacacttgc 15544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 15691000 - 15690916
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| ||||||||||||  || ||||||||| |||||||||||||||| || |||||||||| | |||| |||||||||||||    
T  15691000 ggggattcgaagaatcctaaca-ctgcttacttttctgcaaccaaaacaggt-aatttgctctgttacgaacaaataaaaattgcaa 15690916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 24265354 - 24265435
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||| | ||||||||||| ||||||||| |||||| |||  |||||| |||||| | |||||||||||||||||||||||    
T  24265354 attcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaa-cttgctttattgcaaacagataaaaattgcaa 24265435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 24341985 - 24342066
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||| | ||||||||||| ||||||||| |||||| |||  |||||| |||||| | |||||||||||||||||||||||    
T  24341985 attcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaa-cttgctttattgcaaacagataaaaattgcaa 24342066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 18208125 - 18208212
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct 116  Q
    |||||||| |||| |  |||| ||| ||||||||| |||||||||| ||||||| ||||||||  |||||||||||||||||||||||||    
T  18208125 ggggattcgaagagttgtaactgctacttacttttctgcaaccaaa-caggtaa-cttgctctactgcaaacagataaaaattgcaacct 18208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 17171455 - 17171514
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||  |||||||||||||||    
T  17171455 cttacatttttgcaaccaaagcaggtaa-cttgctctgttgcaactagataaaaattgcaa 17171514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 22755719 - 22755664
Alignment:
Q  54 ttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||    
T  22755719 ttacttttttggaaccaaaactagtaa-cttgctctgttgcaaacagataaaaattg 22755664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 23265252 - 23265164
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttg 229  Q
    ||||| |||||| |||||||||||  |||| || ||||  ||||||||||||| | ||||||||||||||| |||||  ||||||||||    
T  23265252 aaataagtaacgtgaattgtttggttgaaatgaaaatccatatggatacgatattttacttatcactttatcacttgaaaaacaatttg 23265164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 26110461 - 26110560
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||||| | ||||| ||||| ||||| | |||| || ||||||  |||||||||||| || ||||||||||| ||||| ||| ||||||||||    
T  26110461 aaaaatatgtaacacaaattgattggatgaaacaaaaatccctgtggatattatactctactta-cattttattacttgataaacgattcggtacacttg 26110559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 15470163 - 15470082
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||||||||||||||||||||  || | | |||||||| |||||  ||||| ||||||||||||||||||||| ||||||    
T  15470163 aggggattcaaagaatcctaaccgccgctaa-tattttgcaatcaaaattggtaa-cttgctctgttgcaaacagatcaaaatt 15470082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 17474520 - 17474605
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||  |||||||||||||||| || || |||||||||||||||||| | ||| |  | ||||||||||||| |||||||||||    
T  17474520 ggggattataagaatcctaaccgctgctaacatttttgcaaccaaaacagat-aacctattatgttgcaaacagaaaaaaattgcaa 17474605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 26121345 - 26121422
Alignment:
Q  161 ttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| | |||| || ||||||| |||||||||||| || ||||||||||| ||||| |||||||||||||||    
T  26121345 ttggatgaaacaaaaatccctgtggatactatactctactta-cattttattacttgctaaacgatttggtacacttgc 26121422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 28253350 - 28253281
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| || || |||||||| |||||||| |||||||||||||||||||| |||||||||| ||||    
T  28253350 aacgataatccctgtgaatacgatattctactta-cactttattacttggtaaacgatttggtacatttgc 28253281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 20419995 - 20419958
Alignment:
Q  200 ttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||||||||||||||| |||||||||||||    
T  20419995 ttatcactttattacttggtaaacgatttggtacactt 20419958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 24167600 - 24167681
Alignment:
Q  156 attgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||| ||||||||||||  | |  ||| |||||||||||||  ||||||||||||||||||| ||||  |||||||    
T  24167600 attgtttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacactt 24167681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 20744866 - 20744910
Alignment:
Q  195 tctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||    
T  20744866 tctacatatcactttattacttggtaaatgatttggtacacttgc 20744910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 24852046 - 24852121
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagat 102  Q
    ||||||||||||||||||||||| || ||  | || |  ||||||||||||||||  ||||||||||||||||||||    
T  24852046 aggggattcaaagaatcctaaccactgctatcattcta-caaccaaaacaggtaactttgctctgttgcaaacagat 24852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 18937973 - 18937889
Alignment:
Q  27 ggggattcaaagaatcct--aaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||||||||||||||||  |||| ||  |||| ||| ||||||||||| || |||| |||||||||||||||||||||||||||||    
T  18937973 ggggattcaaagaatcctctaaccactg-ttacatttctgcaaccaaaaacatgtaa-cttgctctgttgcaaacagataaaaattg 18937889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24656854 - 24656952
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| |||||||||| |||||||| ||||||  | | |||  ||| |||||||||| | ||||||| |||| |||| || ||||||||||||    
T  24656854 aaataagtaacacgaattgtttagacgaaacaacaatccatgttgatttgattctctacttataattttattaattgggaaactatctggtacacttgc 24656952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 32417407 - 32417452
Alignment:
Q  191 atactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||    
T  32417407 atactctactta-cactttattacttgataaacgatttggtacactt 32417452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 17769461 - 17769494
Alignment:
Q  206 ctttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||| |||||||||||||||    
T  17769461 ctttattacttggtaaacgatttggtacacttgc 17769494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 24260617 - 24260560
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatact 195  Q
    |||||||| |||||||| ||| ||||||||||| |||||||  | |||||||||||||    
T  24260617 caaaaataagtaacgcggattttttggacgaaatgacaatccttgtggatacgatact 24260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 26307658 - 26307604
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||  ||||||  ||||||||||||  |||||||||||||||||||||    
T  26307658 tggatacgatacgatactta--actttattacttaataaacaatttggtacacttgc 26307604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 34487832 - 34487777
Alignment:
Q  56 acttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||| |||||||||| || ||||| ||||||||||| |||||||||||||||||||    
T  34487832 acttttctgcaaccaaa-catgtaaa-ttgctctgttgaaaacagataaaaattgcaa 34487777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 23014637 - 23014707
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||  || |||||| ||||||||||||||||||||||| ||| ||| | ||||| |||||||||    
T  23014637 gaaacgacaatcctta-ggatacaatactctacttatcactttattatttgataatc-atttgatacacttgc 23014707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 32581957 - 32581898
Alignment:
Q  168 aaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaattt 228  Q
    |||||||||||  |||| ||| ||||||| |||||| ||||||||||||| ||||||||||    
T  32581957 aaacgacaatccttatgaataagatactcaacttat-actttattacttgctaaacaattt 32581898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 8770243 - 8770020
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||||||| ||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8770243 atatatacagaggggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaacc 8770144  T
Q  116 taacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||||  ||| ||||||||||| || |||||  ||||||||  ||| ||| |||||||  | |||||| |||||| ||||||||||||||||||    
T  8770143 taacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttatcactttattac 8770044  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||| ||| | |||||||||||||    
T  8770043 ttggttaacga-ttggtacacttgc 8770020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 8765341 - 8765137
Alignment:
Q  17 atatatacaa-ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    |||||||||| |||||||| ||||||| |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8765341 atatatacaaaggggattcgaagaatcttaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaacc 8765242  T
Q  116 taacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||||  ||| ||||||||||| || |||||  ||||||||  ||| ||| |||||||  | ||||||||||||| |||||||||||||||||     
T  8765241 taacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttattaa 8765142  T
Q  215 ttggt 219  Q
    |||||    
T  8765141 ttggt 8765137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 22349627 - 22349410
Alignment:
Q  15 atatatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    ||||||||||| ||| |||| || ||| |||||||||  ||| |||| |||||| |||| || |||| |||||     ||||||||||||||||||||||    
T  22349627 atatatatacacggg-attcgaaaaattctaaccgctgtttatttttctgcaactaaaatagataaatttgct-----gcaaacagataaaaattgcaac 22349534  T
Q  115 ctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    ||||||||||||  ||||||||||||||||| |||| | ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||     
T  22349533 ctaacttttatactgtcaacttacaaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattat 22349434  T
Q  215 ttggtaaacaatttggtacacttg 238  Q
    ||||||||| ||||||||||||||    
T  22349433 ttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 21302153 - 21301918
Alignment:
Q  18 tatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaaca-ggtaaacttgctctgttgcaaacagataaaaattgcaac-- 114  Q
    |||| ||| |||||||| ||||||||||||||||  ||| |||| ||||| ||||| | |||||||||||||||||||||||||||||||||| ||||      
T  21302153 tataaacagggggattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaacac 21302054  T
Q  115 -ctaac----------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttat 203  Q
     |||||          | |||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||  | |||||||||||||||||||||    
T  21302053 tctaacccatatcttttattatatcgtcaatttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttat 21301954  T
Q  204 cactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||| |||||||||||||||    
T  21301953 cactttattacttggtaaacgatttggtacacttgc 21301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 17438304 - 17438527
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct-----aac- 119  Q
    ||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||     |||     
T  17438304 aggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaagctttctaaacc 17438403  T
Q  120 ------ttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatt 212  Q
          | |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||  | |||||| |||||||||||||||| |||||     
T  17438404 tttatttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcattttata 17438503  T
Q  213 acttggtaaacaatttggtacactt 237  Q
    ||||||| ||| |||||||||||||    
T  17438504 acttggt-aacgatttggtacactt 17438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 16229831 - 16230019
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatc 128  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| || |||||||| |    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaactta-cttttatacc 16229929  T
Q  129 gtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
     |||| |||||||||||| |||||  |||||||  |||| ||| ||||||| || ||||||||||||||||||||  |||||||||||||    
T  16229930 atcaaacttacaaaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctacttactactttattacttg 16230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 4650451 - 4650232
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa------------ 113  Q
    ||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||                
T  4650451 aggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaacc 4650352  T
Q  114 cctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttatta 213  Q
    | |||||||| ||||||||||||     |||| |||||||||||||||||| ||||| ||||||| || ||||||||||||| |||| ||||||||||||    
T  4650351 cttaacttttgtatcgtcaactt-----aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttatta 4650257  T
Q  214 cttggtaaacaatttggtacacttgc 239  Q
    |||||||||  | |||||||||||||    
T  4650256 cttggtaaatga-ttggtacacttgc 4650232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 12754794 - 12754990
Alignment:
Q  24 caaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttt 122  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| |||||||    
T  12754794 caaggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattgaaacttaacttt 12754893  T
Q  123 tatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcac-tttattacttg 217  Q
    ||||  ||| || ||||||||||| |||| | ||||||||   |||||| |||||||| | |||||||||||||||| ||||||| |||||||||||    
T  12754894 tatactgtcaaagttacaaaaataagtaaagagaattgttcatacgaaaggacaatcattgtggatacgatactctaattatcacttttattacttg 12754990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 20023426 - 20023618
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||| | ||||||||||||||||||||||||||||  || |||||| |    
T  20023426 aggggattcaaagaatcctaactgctacttacttttctgcaaccaaaactggtaaattcgctctgttgcaaacagataaaaattgca--ctcacttttgt 20023523  T
Q  126 atcgtc--aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    | ||||  |||||||||||||| ||||   |||||||| |||||||| ||||||| || | ||||| ||||| |||||| | |||||||||||||    
T  20023524 accgtcaaaacttacaaaaataagtaagaagaattgttcggacgaaaggacaatccctgttgatacaatactttacttactaactttattacttg 20023618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 932978 - 932758
Alignment:
Q  17 atatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg----- 110  Q
    ||||||||| |||| |||| |||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||         
T  932978 atatatacagagggaattcgaagaatactaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattgtaagt 932879  T
Q  111 -----caacc--taacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta 202  Q
          ||||  ||||||||||| |||| |||||| ||||||| |||| | ||||| ||||||||||| ||||||| || |||||||||||||||| |||    
T  932878 cttttaaacctttaacttttataacgtcaaacttataaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctattta 932779  T
Q  203 tcactttattacttggtaaac 223  Q
    ||| |||||||||| ||||||    
T  932778 tcaatttattacttagtaaac 932758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 19171803 - 19171933
Alignment:
Q  109 tgcaacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactt 208  Q
    |||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||  | || ||| ||| |||| ||||||||||    
T  19171803 tgcaacctaacttttatatcgtcaacctacaaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactt 19171902  T
Q  209 tattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||| ||| ||||||    
T  19171903 tattacttggtaaacaatttagtatacttgc 19171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 8170097 - 8169907
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| |||||||| | ||| ||||||||||||||||||||| ||||   |||||||    
T  8170097 aggggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaattacaact--actttta 8170000  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    || |  ||||||||||||||| |||||  |||||||| ||||||||  | |||| || ||||||||||| | ||||||  |||||||||||||    
T  8169999 taccaacaacttacaaaaataagtaactagaattgttcggacgaaagaaaaatctctgtggatacgatattttacttactactttattacttg 8169907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 3116407 - 3116517
Alignment:
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    |||||||||||||   ||||| |||||| ||||||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||    
T  3116407 tatcgtcaactta---aaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaaca 3116502  T
Q  225 atttggtacacttgc 239  Q
    |||||||||||||||    
T  3116503 atttggtacacttgc 3116517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 21303229 - 21303453
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa--cctaac----- 119  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||   |||||         
T  21303229 ggggattcaaataatcctaaccgctgcttacttttctgcaaccaaaacaagt-aacttgctctgttgcaaacagataaaaattgcaatctctaacccttt 21303327  T
Q  120 ---------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
             |||||||| ||||||||   |||||| ||||||  ||||||||||| ||||| ||||||  | ||| ||||||||||||||||||| ||||    
T  21303328 actcttttattttatatagtcaactt---aaaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatcatttta 21303424  T
Q  211 ttacttggtaaacaatttggtacacttgc 239  Q
    ||| ||||||||| ||||| |||||||||    
T  21303425 ttatttggtaaacgatttgatacacttgc 21303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 12805766 - 12805989
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--aac------ 119  Q
    ||||||| ||||||||||||| || ||||||||| |||||||||| |||||||  || |||||||||||||||||||||||||||| ||  |||          
T  12805766 gggattcgaagaatcctaacccctgcttacttttctgcaaccaaatcaggtaatttt-ctctgttgcaaacagataaaaattgcaatctctaacccttta 12805864  T
Q  120 --------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
            ||||||| |||| |||||   ||||| ||||||| ||||||||||| ||||||||||||  | |||||| ||||||||||||||||||||||    
T  12805865 atcttttattttataacgtcgactta---aaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttat 12805961  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||  |||||||||||||||    
T  12805962 tacttggtaaatgatttggtacacttgc 12805989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 21325566 - 21325340
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct--------- 116  Q
    ||||||| | ||||||| |||||||| ||||||||| ||||||||||  |||||| |||||||||||||||| ||||||||||||||| ||             
T  21325566 aggggatgcgaagaatcataaccgctacttacttttctgcaaccaaattaggtaa-cttgctctgttgcaaatagataaaaattgcaatctctaaccctt 21325468  T
Q  117 -aact-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactt 208  Q
     ||||       |||||||||| ||||||   ||||| ||||| | |||||||||||||||||||||||   | ||||||||||||| ||||||||| ||    
T  21325467 caactcttttattttatatcgttaactta---aaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtt 21325371  T
Q  209 tattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||||||||||||    
T  21325370 tattacttggtaaacaatttggtacacttgc 21325340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 19908531 - 19908307
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacct---------- 116  Q
    ||||||| |||||||||||| ||| ||||||||| |||||||||||  ||||||||||||| ||||||||| | ||||||||| ||| ||              
T  19908531 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaatcttttaaccctt 19908432  T
Q  117 aacttttatatcgtcaactt--acaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    |||||||||||||||||  |  | ||||||| || ||| ||||||||||||||||||||| | |  | ||||||||||||| ||||||||| |||||||     
T  19908431 aacttttatatcgtcaaactgaaaaaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttatcattttattat 19908332  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    ||||||||| |||||||||||||||    
T  19908331 ttggtaaacgatttggtacacttgc 19908307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 218
Target Start/End: Original strand, 19925505 - 19925701
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaa-ccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-------------cctaactt 121  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||             | ||| ||    
T  19925505 aagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatat-aaaattgcaagtctcttttaacccttaaatt 19925603  T
Q  122 ttatatcgtcaactt-acaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||| ||||| | ||||||| |||||||||||| ||||||||||| |||||||  | ||||||||||||||||| |||||| |||||||||||    
T  19925604 ttatatcgttaacttaataaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttattacttgg 19925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 27413780 - 27413957
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtcaac 134  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||| | ||||||||| |||||||||||||||| |||  |||||||||| ||||||     
T  27413780 aagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctgttgaaaacagataaaaattgtaac--aacttttata-cgtcaaa 27413876  T
Q  135 ttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattac 214  Q
     |||||||||| |||||  ||||||||  | ||||| ||||||| || |||||| ||||||||||||| | ||||||||||    
T  27413877 ctacaaaaataagtaacaagaattgttcagtcgaaaggacaatccctttggatatgatactctacttactaactttattac 27413957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 12411372 - 12411151
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa-----------cc 115  Q
    |||||||| ||||||||||||||   |||||| || |||||||||| |||||||||||| | |||||||||||  ||||||||||||           |     
T  12411372 ggggattcgaagaatcctaaccgtcacttactgttctgcaaccaaa-caggtaaacttgttgtgttgcaaaca--taaaaattgcaaatttctaaaccct 12411276  T
Q  116 taacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattac 214  Q
    ||||||||||||| |||| |||| ||||||| |||||   ||||||||| ||||||||||||||  | |||||||||||||||||| |||||||||||||    
T  12411275 taacttttatatcatcaaacttagaaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctactaatcactttattac 12411176  T
Q  215 ttggtaaacaatttggtacacttgc 239  Q
    |||||||   |||||||||||||||    
T  12411175 ttggtaagtgatttggtacacttgc 12411151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 20429908 - 20429714
Alignment:
Q  54 ttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---aac-----------ttttatatcgtcaa-cttac 138  Q
    |||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||| ||   |||           | |||||||||||| ||||     
T  20429908 ttacttttctgcaaccaaaatagataaacttgctctgttgcaaacatataaaaattgcaaacttctaacccttactcttttattatatcgtcaaactta- 20429810  T
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacac 235  Q
     |||||| |||||||||||||| |||| |||| |||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  20429809 -aaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaacaatttagtacac 20429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 19167620 - 19167433
Alignment:
Q  28 gggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttata 126  Q
    |||||||||| ||||||||||| | |||||||| | ||||||||||  ||||||| | ||| | ||||||||||||||||||||||||| |  |||||||    
T  19167620 gggattcaaataatcctaaccgttgcttactttct-gcaaccaaaaataggtaaattcgctttattgcaaacagataaaaattgcaaccaa--ttttata 19167524  T
Q  127 tcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
      ||||||||||||||||| |||||  |||||||| |||||||| || ||||  | |||||||||||||||| |||  ||||| |||||||    
T  19167523 ctgtcaacttacaaaaataagtaactagaattgttcggacgaaaggataatccatgtggatacgatactctatttacaactttcttacttg 19167433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 10744984 - 10744902
Alignment:
Q  157 ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  10744984 ttgtttagacgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaacttgc 10744902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 19909833 - 19910020
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaac-caaaacaggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||  ||||||||||||   ||| | || |||| |||||||||||||    
T  19909833 aataaatatacataggggattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggtaaatgcgcttttttacaaagagataaaaattgc 19909932  T
Q  112 aacctaacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctact 200  Q
    |||   |||||||||  ||| |||||||||||||| |||||  |||||||| | | |||| ||||||| || ||||||||||||||||||    
T  19909933 aac--tacttttatacggtcaaacttacaaaaataagtaactagaattgttcgaaagaaaggacaatccctgtggatacgatactctact 19910020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 16245604 - 16245827
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac--- 119  Q
    ||||||||  ||||| ||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    |||||       
T  16245604 ggggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaaatctctaaccct 16245702  T
Q  120 ------ttttat---atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcacttta 210  Q
          ||||||   || |||||   || |||||| |||||| ||||||||||||||||| || ||||  | |||||| |||||||||||||||||||||    
T  16245703 taactcttttattttattgtcaa---actaaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcacttta 16245799  T
Q  211 ttacttggtaaacaatttggtacacttg 238  Q
    ||||||||||||| | ||||||||||||    
T  16245800 ttacttggtaaacgagttggtacacttg 16245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 41508591 - 41508367
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa---cctaa----- 118  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||||||| || |||||||| ||||||||||||||| |||||||||    ||||         
T  41508591 ggggattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgt-aacttgctttgttgcaaacagatacaaattgcaaatctctaaccctt 41508493  T
Q  119 ----ctttta---tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
        ||||||   ||||||||| ||  ||||||| |||| || |||||||||||| ||||||||||| |    ||||||||| ||||| |||||||||||    
T  41508492 aactcttttattttatcgtcaaatt--aaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacctatcactttat 41508395  T
Q  212 tacttggtaaacaatttggtacacttgc 239  Q
    |||||| ||||| |||||||||||||||    
T  41508394 tacttgataaacgatttggtacacttgc 41508367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 238
Target Start/End: Original strand, 2167492 - 2167714
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaac---ctaac---- 119  Q
    |||||||| ||||||||||||| ||||||||||||   |||||||||||||||| |||| | |||||||||||||||||||||||||    |||||        
T  2167492 ggggattcgaagaatcctaaccacttcttacttttccacaaccaaaacaggtaa-cttggtatgttgcaaacagataaaaattgcaaatctctaaccatt 2167590  T
Q  120 -----ttttat---atcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
         ||||||   || |||||  ||  |||||| |||| | |||||||||||||||||||||| |   | |||||||||||||||||||||||||||||    
T  2167591 tactcttttattttatagtcaaacta--aaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctacttatcactttat 2167688  T
Q  212 tacttggtaaacaatttggtacacttg 238  Q
    |||||||| ||| ||||||||||||||    
T  2167689 tacttggt-aacgatttggtacacttg 2167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 10918016 - 10917918
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||| ||||| |||||||| ||||||  | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10918016 aaataggtaatgcgaactgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgc 10917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 19576105 - 19576286
Alignment:
Q  37 agaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttatatcgtcaa-c 134  Q
    ||||||||||||||| ||| ||||| |||||||||||  ||||||| |  || ||||||||||||||||||||||||||   ||||||||| ||| || |    
T  19576105 agaatcctaaccgctgcttgcttttctgcaaccaaaaataggtaaattcactttgttgcaaacagataaaaattgcaact--acttttataccgttaaac 19576202  T
Q  135 ttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    |||||||| || |||||  |||||||| |||||||| |||||||  | ||||||||||||||| || | | |||||||||||||    
T  19576203 ttacaaaagtaagtaactagaattgttcggacgaaaggacaatccatctggatacgatactctcctcactaactttattacttg 19576286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 8889130 - 8889229
Alignment:
Q  119 cttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    |||||||| |||||| |||||||||||| |||||| |||||||| | |||||| ||||||| || ||||||| |||||||||||||||||||||||||||    
T  8889130 cttttataccgtcaaacttacaaaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattacttg 8889229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 12759459 - 12759388
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12759459 gaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 12759388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 21825870 - 21825965
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| |||||||||| |||||||||||||| | ||||  | |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacactt 21825965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 28729036 - 28728944
Alignment:
Q  147 gtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||||||  ||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||  |||||  ||||||||    
T  28729036 gtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaattatttgacacacttgc 28728944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 821515 - 821606
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggta 232  Q
    ||||| |||||  |||||||||  ||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggta 821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 18458467 - 18458522
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18458467 tggatacgatactctacttatcactttattacttgataaacaatttggtacacttg 18458522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 18736672 - 18736769
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||||||| |||||| |||||||||||||   || | ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  18736672 aaaataagtaacgcgagttgtttagacgaaacgacaacacctgtagatacgatattctacttat-actttattacttggtaaacgatttggtacacttg 18736769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 7478334 - 7478429
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||||| |||||| ||||||||||||| |||||||||||| | ||||||||||| ||     |||||||||||| |||||||||| |||||||||||||    
T  7478334 aaaaataagtaacgtgaattgtttggaccaaacgacaatcaatgtggatacgatagtc-----atcactttattatttggtaaacagtttggtacacttg 7478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 5508434 - 5508336
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||| |||||||||  |||||||||||||||||||||  | ||||||  |||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  5508434 aaaataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-acttatcactttattacttggcaaatgatttggtacacttgc 5508336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 17156016 - 17155931
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||| | |||||| |||| ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  17156016 aggggattcaaatagtcctaatcgctacttacttttctgcaaccaaat-aggtaa-cttgctctgttgcaaacagataaaaattgcaa 17155931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 8319155 - 8319055
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||| ||||||||   ||||| |||||  |||||||||| ||||||||| |||| || ||||||| ||| |||||||||||||| ||||||||||    
T  8319155 ttttatatcatcaactta---aaataagtaacatgaattgtttgtacgaaacgataatccctgtggatactatattctacttatcacttcattacttggt 8319059  T
Q  220 aaac 223  Q
    ||||    
T  8319058 aaac 8319055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 8557130 - 8557211
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    ||||| ||||||| ||||||||  | ||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaaa 8557211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 31286017 - 31286112
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| ||||||  ||||||||||||||||| |||||| || ||||||||||| |||| ||| |||||||||||||||||||  ||||||||||||||    
T  31286017 aaataagtaacggaaattgtttggacgaaac-acaatccctgtggatacgatattctagtta-cactttattacttggtaaatgatttggtacacttg 31286112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 2723712 - 2723790
Alignment:
Q  29 ggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||||||| | || |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  2723712 ggattcaaatagtcttaaccgctgcttacttttttgcaacc-aaacaggt-aacttgctttgttgcaaacagataaaaatt 2723790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 6290001 - 6289903
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| ||||||||| |  |||||| || ||||  | |||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  6290001 aaataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgc 6289903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 8446045 - 8445960
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||||||| || ||||| ||| |||||||||   |||| |||||| |||||||||||| ||||||||||||||    
T  8446045 ggggattcaaagaatcctaaccactgcttacatttctgcaaccaatggaggt-aacttgttctgttgcaaactgataaaaattgcaa 8445960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 8882996 - 8883094
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttt 123  Q
    ||||||||| |||||||||||| ||  |||| |||| |||||| ||||  ||||||||| ||| |||||||||||||||||||||||||| || |||||    
T  8882996 aggggattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaacttagctttt 8883094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 13908253 - 13908322
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||    
T  13908253 gaaacgataatccctatggatatgatactctacttatcactttattacttgg-aaaagatttggtacactt 13908322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 18736555 - 18736628
Alignment:
Q  35 aaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| |||||| || |||||||||| |||||||||    
T  18736555 aaagaatcctaaccgctgcttatttttctgcaaccaaaacaggt-aacttgttcggttgcaaacaaataaaaatt 18736628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 21825744 - 21825829
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||||||| |||||||   | ||||||||| ||||||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  21825744 ggggattcaaagagtcctaactcttacttacttttctgcaaccaaaaaaggt-aacttgctatgttacaaacagataaaaattgcaa 21825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 8143711 - 8143617
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||| |||| |||| ||||||||| ||||||| ||||||  ||||||| |||||||||||| ||||||||| ||| |||||| |||||||||||||    
T  8143711 aaataagtaaagcgagttgtttggatgaaacgagaatcacg-tggatacaatactctactta-cactttattgcttagtaaacgatttggtacactt 8143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 8267155 - 8267076
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaa 107  Q
    ||||||||||||| ||||||||||| || |||||| ||||||||||| |||| || |||||||||||| |||||| |||||    
T  8267155 ggggattcaaagagtcctaaccgctactgacttttatgcaaccaaaataggt-aatttgctctgttgctaacagaaaaaaa 8267076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 10745099 - 10745040
Alignment:
Q  53 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  10745099 cttacatttctgcaaccaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaa 10745040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 10923238 - 10923150
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacact 236  Q
    ||||||||| ||||| || ||||| ||||||    ||||||||||||| || |||||||||||||||||||||||  ||||||||||||    
T  10923238 taacgcgaactgtttagatgaaacaacaatcctcgtggatacgatactgtaattatcactttattacttggtaaatgatttggtacact 10923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 11517998 - 11518061
Alignment:
Q  177 tcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    ||||| |||||| |||| ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  11517998 tcactgtggatatgatattctacttatcactttattacttgatgaacgatttggtacacttgct 11518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 8445922 - 8445846
Alignment:
Q  138 caaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattactt 216  Q
    |||||| |||||||||||||| |||||||||||||||||||  | |||| || |||||||||||| |||||||||||||    
T  8445922 caaaaacatgtaacgcgaatt-tttggacgaaacgacaatccatgtggacacaatactctactta-cactttattactt 8445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 3116321 - 3116380
Alignment:
Q  54 ttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  3116321 ttacttttctgcaaccaaaaccaggtat-cttgctctgttgcaaacagataaaaattgcaa 3116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 8143837 - 8143767
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaaca 99  Q
    |||||||| |||||||||||||| | ||||| ||| |||||||||||||||| |||||| |||||||||||||    
T  8143837 ggggattccaagaatcctaaccgttgcttac-tttctgcaaccaaaacaggt-aacttgttctgttgcaaaca 8143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 11533018 - 11533073
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||||| |||||||||||||||||||||| ||||||||   |||||||||||||    
T  11533018 tggatacggtactctacttatcactttattatttggtaaatgttttggtacacttg 11533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 8319269 - 8319196
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacaga 101  Q
    ||||||||||||| |||||||| || ||||||||| ||||||||||| |||| || ||||| |||||| ||||||    
T  8319269 ggggattcaaagagtcctaaccactgcttacttttatgcaaccaaaataggt-aatttgctatgttgctaacaga 8319196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 27542958 - 27543011
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||    
T  27542958 tggatacgatactctacttat-actttatttcttggtaaacgatttgatacactt 27543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 23056212 - 23056269
Alignment:
Q  181 tatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||  |||| |||||||||    
T  23056212 tatggatacgatactcaactta-cacttcattacttggtaaacgttttgatacacttgc 23056269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 31285890 - 31285975
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| || |||| |||| ||| ||||||||||   |||||||| |||||| |||||||| ||| ||||| |||||||||||||    
T  31285890 ggggattcgaataatcttaactgctgcttactttttgaaaaccaaaataggtaa-cttgctctattgaaaacatataaaaattgcaa 31285975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 7495094 - 7495186
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacact 236  Q
    ||||||| ||||||  |||||||||||||||||||| |||  | ||||| ||||||||     |||||||||||| |||||||| | |||||| ||||    
T  7495094 aaaaataagtaacgttaattgtttggacgaaacgacgatccatgtggattcgatactc-----atcactttattatttggtaaatagtttggtgcact 7495186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 19706839 - 19706895
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgct 240  Q
    |||||| |||||| |||||| | |||||||| ||||||||||||||| ||||||||||    
T  19706839 tggatatgatactttactta-ctctttattatttggtaaacaatttgatacacttgct 19706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 7148059 - 7147988
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||  | |||| ||||||||||||||||   |||| |||||||||||| |||||||||| ||||    
T  7148059 gaaacgacaatccatgtggagacgatactctacttattt-tttagtacttggtaaacgatttggtacatttgc 7147988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 21019625 - 21019688
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtac 233  Q
    ||||||||||  | |||||| |||||||||||||| |||||||||||||||| |  |||||||||    
T  21019625 aacgacaatccttgtggataagatactctacttat-actttattacttggtagatgatttggtac 21019688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 21074581 - 21074636
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||| |||||||||||||| || |  |||||||||| ||||    
T  21074581 tggatacgatactctactta-cactttattacttgatagatgatttggtacagttgc 21074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 3745 - 3533
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||||||||||| ||| |||   ||| | ||| |||| |||||||| | |||||||||||||||||| |||||||||||||||||||||     
T  3745 aggggattcgaagaatcctaactgctgctttactttctccaatcaaagcaggtaaattcgctctgttgcaaacagatgaaaattgcaacctaacttttac 3646  T
Q  126 atcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaaca 224  Q
    | |||||| |||||||||||| |||||  |||||||| |||||||| |||||||  | ||||||||||||||||||||||||||||||||||||| ||||    
T  3645 accgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggttaaca 3546  T
Q  225 atttggtacacttg 238  Q
    | ||||||||||||    
T  3545 a-ttggtacacttg 3533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 12181 - 12109
Alignment:
Q  167 gaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||| |||||||  |||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  12181 gaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgc 12109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 695 - 904
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct-------- 116  Q
    ||||| ||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||            
T  695 agggggttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatctttctaaac 794  T
Q  117 ----aacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttat 211  Q
        | ||||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  795 ccttatcttttatatcgtcaaacttataaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttat 894  T
Q  212 tacttggtaa 221  Q
    ||||||||||    
T  895 tacttggtaa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 70128 - 69913
Alignment:
Q  36 aagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct-----------aactttt 123  Q
    |||||||||||| ||| ||||||||| | ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||           | |||||    
T  70128 aagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaacctttctaacctttatctttt 70029  T
Q  124 atatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||  | || |||||||||| ||||| ||||||||||||||||||||     
T  70028 atatcatcaacatacaaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaaat 69929  T
Q  224 aatttggtacacttgc 239  Q
     |||||||||||||||    
T  69928 gatttggtacacttgc 69913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 98779 - 98689
Alignment:
Q  86 ctctgttgcaaacagataaaaattgcaacctaacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatc 178  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||  |||||||||| |||||  || || || |||||||| |||||||    
T  98779 ctctattgtaaacagataaaaattgcaacc--acttttatatcgtcaaactacaaaaataagtaacaagatttattcggacgaaaggacaatc 98689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 656 - 482
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctaacttttat 125  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| || ||||||||    
T  656 aggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa-cttacttttat 558  T
Q  126 atcgtc--aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctac 199  Q
    |  |||  ||||||||||||||  ||||  |||||||| |||||||| |||||||  | |||||||||||||||||    
T  557 actgtcaaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 76630 - 76439
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacctaactttta 124  Q
    ||||||||| ||||||||||| || | ||||||||| | ||||||||| |||||||| ||||| ||||| ||||| |||||| ||||||| |||||||||    
T  76630 aggggattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaaatttgcaac-taactttta 76532  T
Q  125 tatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactta-tcactttattacttg 217  Q
    || | |||||| ||||||||| |||||  |||||||| ||||||||  |||||| || |||||| ||||||||||||| | |||||||||||||    
T  76531 taccctcaact-acaaaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctacttactaactttattacttg 76439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 39809 - 39584
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa--cctaa------ 118  Q
    ||||||||||||| || |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||          
T  39809 ggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaacaggt-aacttgctctgttgcaaacagataaaaattgcaatctctaattctta 39711  T
Q  119 --------cttttatatcgtcaacttacaaaaatatgtaacgcga-attgtttggacgaaacgacaatcactatggatacgatactctacttatcacttt 209  Q
             |||||||||||||||||   |||||| |||| | ||  || ||||||| |||| ||||||| | |||||||||| ||||||||||||||||    
T  39710 tctcttttattttatatcgtcaactt---aaaataagtaaagtgagtttttttggacaaaacaacaatcaatgtggatacgatgctctacttatcacttt 39614  T
Q  210 attacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||| ||||| ||||||||||    
T  39613 attacttggtaaataattttgtacacttgc 39584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 368 - 488
Alignment:
Q  119 cttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||||||||||||| | |||||| ||||| ||||||||||||||||| ||||||| || | ||||||||||||||| |||||||||||||||| |    
T  368 cttttatatcgtcaacttatataaatatctaacgagaattgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattactttg 467  T
Q  219 taaacaatttggtacacttgc 239  Q
    ||||| || || |||||||||    
T  468 taaacgatatgatacacttgc 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 845 - 728
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacg-cgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    ||||||||| ||||||||   ||||| |||||| || |||||||||||||||||||||||  | | ||||| ||||||||||||||||||||||||||||    
T  845 ttttatatcttcaactta---aaataagtaacgtcggattgtttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttgg 749  T
Q  219 taaacaatttggtacacttgc 239  Q
    ||||| |||||||||||||||    
T  748 taaacgatttggtacacttgc 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 952 - 871
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||||||||||| ||||||||||| |||| |||| | ||||| |||||||| | ||| ||||||||||||||| |||||||||    
T  952 ggggattcaaagagtcctaaccgctgcttagttttctacaacc-aaacaggt-atcttactctgttgcaaacaggtaaaaattg 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 62; Significance: 7e-27; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 48172 - 48289
Alignment:
Q  119 cttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttgg 218  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||||||||  |||||||  ||  ||||||||||||||||||||||||||||||||||    
T  48172 cttttacatcgtcaacttacaaaaataagtaa-gagaattgtttggacgaattgacaatccata--gatacgatactctacttatcactttattacttgg 48268  T
Q  219 taaacaatttggtacacttgc 239  Q
    ||||| ||||| |||| ||||    
T  48269 taaacgatttgatacatttgc 48289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 234490 - 234362
Alignment:
Q  91 ttgcaaacagataaaaattgcaacctaacttttatatcgtcaa-cttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatac 189  Q
    |||||||||||||||||||||||  |||||||||||  || || |||||||||||| || ||  |||||||| |||||||| ||||||| || ||| |||    
T  234490 ttgcaaacagataaaaattgcaatataacttttatagagttaaacttacaaaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtac 234391  T
Q  190 gatactctacttatcactttattacttgg 218  Q
    |||||| ||||||||||||||||||||||    
T  234390 gatactatacttatcactttattacttgg 234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 54931 - 54862
Alignment:
Q  168 aaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  54931 aaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 54862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 55086 - 55003
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||||||||||| ||||||||  |  || ||||| ||||||| ||||||||| |||||||| ||| ||||||| ||||||||||    
T  55086 ggggattcaaagagtcctaaccagtgttttcttttgtgcaaccaaaaacaggt-aacttgctatgtcgcaaacaaataaaaattg 55003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 168282 - 168397
Alignment:
Q  120 ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggt 219  Q
    ||||||||||||||||||   ||||| ||||| |||  | ||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  168282 ttttatatcgtcaactta---aaataagtaacacgagctatttagaagaaacgacaatc-ctgtggatacgatactctacttatcactttattacttggt 168377  T
Q  220 aaacaatttggtacacttgc 239  Q
    |||| |||||||||||||||    
T  168378 aaacgatttggtacacttgc 168397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 168163 - 168256
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattg 110  Q
    ||||| ||| ||||||||||||| ||||||||| |  || ||||| | ||||||||| || |||| |||||||||||||||||||||||||||||    
T  168163 atataaacagggggattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaa-cttgctctgttgcaaacagataaaaattg 168256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 6575 - 6764
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| ||||||||| |||||| |||||||||||| |||| |||||| ||||| |  |||| |||||||||||||||||||||    
T  6575 aataaatatacataggggattcgaagaatcctgaccgctgcttacttttttgaaaccaaaaacaagtaaattcactctattgcaaacagataaaaattgc 6674  T
Q  112 aacctaacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactt 201  Q
    || || ||||||||||| || |||||| |||| || |||||  |||||||| |||||||   ||| || || |||||| ||||||||||||    
T  6675 aa-ctcacttttatatcatcaaacttataaaactaggtaactagaattgttcggacgaatgaacagtccctgtggatatgatactctactt 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 5965 - 6171
Alignment:
Q  14 aatatatataca-aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgc 111  Q
    |||| ||||||| ||||||||| ||||||||| |||| | ||||||||| | ||||||||| || ||||| | ||||| |||||||||||||||||||||    
T  5965 aataaatatacataggggattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgc 6064  T
Q  112 aacctaacttttatatcgtc-aacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctactt-atcacttt 209  Q
    || || ||||||||| | || |||||||||||||| ||| |  |||||||| ||| |||   ||| || || |||||| |||||| |||||  | |||||    
T  6065 aa-ctcacttttataccttcaaacttacaaaaataggtacctagaattgttcggatgaatgaacagtccctctggatatgatactatacttgctaacttt 6163  T
Q  210 attacttg 217  Q
    ||||||||    
T  6164 attacttg 6171  T

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Target: scaffold0650 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 6385 - 6287
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||| |||||||||||||||||||| ||||||  | ||||||||||||| ||||||| |||||||||||| |||||| ||||| |||||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgc 6287  T

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Target: scaffold0263 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 15881 - 15708
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaacc-aaaacaggtaaacttgctctgttgcaaacagataaaaattgc---- 111  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||  |||||| ||||||||| ||||||||||||||||||  ||||||||||||        
T  15881 atatagacaaggggattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggt-aacttgctctgttgcaaattgataaaaattgcaaga 15783  T
Q  112 ------aacc---taacttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaat 177  Q
          ||||   || |||||||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||||    
T  15782 ctttctaaccgtttatcttttatatcatcaacttataaaaatatctaacgagaattgtttggacgaaatgacaat 15708  T

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Target: scaffold0672 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 1819 - 1736
Alignment:
Q  154 gaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||||||||  || ||||||||||  || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  1819 gaattgtttacacaaaacgacaattcctgtggatacgatactctacttatcacttttttacttggtaaacagtttggtacactt 1736  T

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Target: scaffold0838 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 2461 - 2371
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||||||||| |||| | |||||  | |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  2461 taacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2371  T

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Target: scaffold0832 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 2492 - 2402
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||||||||| |||| | |||||  | |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  2492 taacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2402  T

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Target: scaffold0042 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 30006 - 29909
Alignment:
Q  139 aaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||| ||||||  |||||||||   || ||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  30006 aaaaataagtaacgtaaattgtttgacagatacgacaatctctatggataccatactctactta-cactttattacttggtaaacgatttggtacactt 29909  T

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Target: scaffold0957 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 3369 - 3153
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacct--aactttt 123  Q
    ||||||||||| |||| |||||||| ||||||||| |  |||||||| |||||||| ||||||| || |||||| |||||||||||||| |  | |||||    
T  3369 ggggattcaaaaaatcataaccgctgcttacttttctataaccaaaaacaggtaaa-ttgctctattacaaacaaataaaaattgcaacttccatctttt 3271  T
Q  124 at----atcgtca-acttacaaaaatatgtaacgcgaa-ttgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttg 217  Q
    ||    ||||||| ||   ||||||| |||| | | || || |||||| |||| |||||||  | ||||||||||||||||| || ||||||||||||||    
T  3270 atttatatcgtcagac---caaaaatttgtatccccaaattttttggatgaaatgacaatccgtgtggatacgatactctacata-cactttattacttg 3175  T
Q  218 gtaaacaatttggtacacttgc 239  Q
    ||||||||||| ||||||||||    
T  3174 gtaaacaattttgtacacttgc 3153  T

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Target: scaffold0102 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 35636 - 35553
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaac 223  Q
    |||||| |||| |||||||||||||||||||||| ||||  | ||||||| |||||||| |||||||||||||||||| |||||    
T  35636 aaaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataaac 35553  T

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Target: scaffold0102; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 35763 - 35677
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||  ||||||| |||||||| ||||| ||| |||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  35763 aggggatttgaagaatcttaaccgctgcttacctttctgcaaccaaaacaggt-aacttgctttgttgcagacaaataaaaattgcaa 35677  T

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Target: scaffold0155 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 35995 - 36077
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaa 222  Q
    |||||| ||||| |||||| |||||| |||||||||||   | |||||||||||||||||||||||||||||||||| |||||    
T  35995 aaaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctacttatcactttattacttagtaaa 36077  T

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Target: scaffold0155; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 35868 - 35954
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||| ||||| ||||| || |||| |||| |||||||||||||||    
T  35868 ggggattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggt-aactttctttgttccaaatagataaaaattgcaa 35954  T

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Target: scaffold0043 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 89854 - 89951
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||||||| |||||| ||||||||||||||   | | |||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  89854 aaaataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctactta-cactttattacttggtaaacgatttgatacacttg 89951  T

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Target: scaffold0043; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 89731 - 89809
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||| ||||| ||||||||||| |||| |||| |||||||||||||||| |||||| || |||||||||||||| |||||    
T  89731 gatttaaagagtcctaaccgctgcttatttttctgcaaccaaaacaggt-aacttgttcggttgcaaacagatagaaatt 89809  T

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Target: scaffold0054 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 72236 - 72148
Alignment:
Q  26 aggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    ||||||||| ||||||||| ||  || ||||||||| |||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  72236 aggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaa 72148  T

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Target: scaffold0054; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 72125 - 72074
Alignment:
Q  186 atacgatactctacttatcactttattacttggtaaacaatttggtacactt 237  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  72125 ataccatactctacttatcactttattacttggttaacaatttggtacactt 72074  T

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Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 69301 - 69218
Alignment:
Q  31 attcaaagaatcctaaccgcttcttacttttttgcaaccaa-aacaggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||| |||||||||||||||| |||| |||| ||||   || ||||||||||||| ||||||||||||||||||||||||||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaa 69218  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 81571 - 81487
Alignment:
Q  154 gaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||| |||||||| ||||||  | ||||||| |||| |||||||||||||||||| ||||||||| |||| ||| ||||||    
T  81571 gaattattttgacgaaaccacaatccatgtggatacaatac-ctacttatcactttattatttggtaaacgatttcgtaaacttgc 81487  T

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Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 69137 - 69082
Alignment:
Q  183 tggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||| ||| |||||||||||||||||||||| ||  |||||||||||||||    
T  69137 tggatacgattctcaacttatcactttattacttggt-aatgatttggtacacttgc 69082  T

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Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 78692 - 78594
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| |||||||| |||| || |  ||||||||||||  |||||||||||| ||  |||||||| ||||||||||||||||| || ||||||||||||    
T  78692 aaataagtaacgcggattggtttgttgaaacgacaatccttatggatacgatgcttaacttatcagtttattacttggtaaacgatatggtacacttgc 78594  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 181706 - 181803
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    |||||| ||||| ||| || ||||||| |||||||||||  | |||||||||||||| | ||||||||||||||||||||||   ||||||||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaattgatttggtacacttg 181803  T

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Target: scaffold0019; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 11338 - 11241
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 238  Q
    ||||| |||| || ||||||||||  ||||| ||||||  | | |||| |||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  11338 aaataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttattatttgataaacaatttagtacacttg 11241  T

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Target: scaffold0062 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 43091 - 43304
Alignment:
Q  17 atatatacaaggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaacc 115  Q
    ||||| ||| ||||||||||||| || ||||||||  ||  |||| || |||||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  43091 atataaacagggggattcaaagagtcttaaccgctattttgttttctgtaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaattgcaatc 43189  T
Q  116 t--aac--------------ttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctac 199  Q
    |  |||              |||||||||||||| |||   ||||| ||||| |||  ||||| |||||||||||||||  | |||||||| |||| |||    
T  43190 tctaacccttatctcttttattttatatcgtcaattta---aaataagtaacacgagctgtttagacgaaacgacaatccttgtggatacgttactttac 43286  T
Q  200 ttatcactttattacttg 217  Q
    ||||||||||||||||||    
T  43287 ttatcactttattacttg 43304  T

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Target: scaffold0653 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 4484 - 4582
Alignment:
Q  141 aaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||| ||||| ||||||||||  |||||| |||||||  | ||||||||||||||| |||| || ||| ||||||||||||| ||| |||||| ||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgc 4582  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 15494 - 15564
Alignment:
Q  169 aacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||  | ||||||||||||||||| ||| ||||||||||||||||||  ||||| |||||||||    
T  15494 aacgacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgc 15564  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 15376 - 15416
Alignment:
Q  63 tgcaaccaaaacaggtaaactt-gctctgttgcaaacagat 102  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  15376 tgcaatcaaaacaggtaaacttcgctctgttgcaaacagat 15416  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 3859 - 3771
Alignment:
Q  27 ggggattcaaagaatcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaac 114  Q
    |||||||  |||||||||||||||  ||||||||| ||||| |||||  |||||||||| || |||||| | |||||||||||||||||    
T  3859 ggggattggaagaatcctaaccgcagcttacttttctgcaaacaaaaataggtaaactttctatgttgcgagcagataaaaattgcaac 3771  T

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Target: scaffold0427 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 2818 - 2881
Alignment:
Q  140 aaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttat 203  Q
    |||||| ||||| |||||||||||||||||||||||||   | |||||||||||||| ||||||    
T  2818 aaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaacttat 2881  T

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Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 51162 - 51123
Alignment:
Q  200 ttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  51162 ttatcactttattacttggtaaacaatttggttcacttgc 51123  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 18793 - 18844
Alignment:
Q  188 acgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||||||||||    
T  18793 acgatactctacttatgattttattacttgataaataatttggtacacttgc 18844  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 223078 - 223129
Alignment:
Q  188 acgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    |||||||||||||||| | ||||||||||| |||| ||||||| ||||||||    
T  223078 acgatactctacttatgattttattacttgataaataatttggcacacttgc 223129  T

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Target: scaffold0090 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 7425 - 7506
Alignment:
Q  153 cgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtaca 234  Q
    |||||||||| ||| ||||||||||   | |  |||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  7425 cgaattgtttagaccaaacgacaattcttgtaaatacaatactctacttatcactttattacttgataaacgatttagtaca 7506  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 94643 - 94574
Alignment:
Q  119 cttttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggacgaaacgacaatcactatggata 188  Q
    |||||||| | |||||||  |||||||| ||||| ||||| |||||||||||||||||||  ||||||||    
T  94643 cttttatagcatcaacttttaaaaatatctaacgagaattatttggacgaaacgacaatccatatggata 94574  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 114710 - 114631
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaatt 109  Q
    |||||||||| ||||||||| |  || ||||| ||||||||||| |||||||  ||| |||||||||||||||||||||||    
T  114710 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaacaggtaat-ttggtctgttgcaaacagataaaaatt 114631  T

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Target: scaffold0351 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 5641 - 5724
Alignment:
Q  30 gattcaaagaatcctaaccgcttcttacttttttgcaaccaaaa-caggtaaacttgctctgttgcaaacagataaaaattgcaa 113  Q
    |||||||||||||||||||| |  || ||||| | ||||||||| |||||||  ||| ||| |||||||||||||||||||||||    
T  5641 gattcaaagaatcctaaccgttgtttccttttctacaaccaaaaacaggtaat-ttggtctattgcaaacagataaaaattgcaa 5724  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 19201 - 19111
Alignment:
Q  148 taacgcgaattgtttggacgaaacgacaatcactatggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgc 239  Q
    ||||||||||||||| ||| | |||| |||   | || |||||||| | ||||||||| |||||||||||  ||||||||||||||||||||    
T  19201 taacgcgaattgtttagacaacacgataattcatgtgcatacgataatttacttatcattttattacttga-aaacaatttggtacacttgc 19111  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 37413 - 37452
Alignment:
Q  195 tctacttatcactttattacttggtaaacaatttggtaca 234  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  37413 tctacatatcactttattacttggtaaacaatttagtaca 37452  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 7661 - 7697
Alignment:
Q  201 tatcactttattacttggtaaacaatttggtacactt 237  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  7661 tatcactttattacttggtaaacgatttgatacactt 7697  T

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