View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15554_high_7 (Length: 579)

Name: NF15554_high_7
Description: NF15554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15554_high_7
NF15554_high_7
[»] chr7 (29 HSPs)
chr7 (159-579)||(43699500-43699921)
chr7 (1-85)||(28536797-28536881)
chr7 (1-90)||(7240744-7240833)
chr7 (1-90)||(31319445-31319534)
chr7 (1-85)||(1565775-1565859)
chr7 (1-85)||(1738493-1738577)
chr7 (1-85)||(38063959-38064043)
chr7 (1-85)||(46840860-46840944)
chr7 (1-87)||(36583393-36583479)
chr7 (1-90)||(9268751-9268840)
chr7 (1-90)||(38441455-38441544)
chr7 (1-85)||(7482225-7482309)
chr7 (1-85)||(23314185-23314269)
chr7 (1-88)||(94364-94451)
chr7 (1-88)||(36016242-36016329)
chr7 (1-90)||(22285694-22285783)
chr7 (1-85)||(4790248-4790332)
chr7 (84-159)||(43700011-43700086)
chr7 (1-69)||(33418392-33418460)
chr7 (1-85)||(9575409-9575493)
chr7 (40-90)||(38441545-38441595)
chr7 (1-79)||(40840165-40840243)
chr7 (40-85)||(1738447-1738492)
chr7 (40-85)||(7240834-7240879)
chr7 (40-85)||(7482310-7482355)
chr7 (40-85)||(9268841-9268886)
chr7 (40-85)||(22285784-22285829)
chr7 (40-85)||(23314139-23314184)
chr7 (40-85)||(46840945-46840990)
[»] chr2 (36 HSPs)
chr2 (271-579)||(45514302-45514610)
chr2 (1-87)||(13197756-13197842)
chr2 (1-85)||(3055558-3055642)
chr2 (1-85)||(4683978-4684062)
chr2 (1-85)||(15896842-15896926)
chr2 (1-85)||(37990059-37990143)
chr2 (1-85)||(41478685-41478769)
chr2 (1-85)||(44397547-44397631)
chr2 (1-85)||(44398686-44398770)
chr2 (1-85)||(16044363-16044447)
chr2 (1-85)||(37666656-37666740)
chr2 (1-85)||(6648565-6648649)
chr2 (1-85)||(13344484-13344568)
chr2 (1-85)||(16243829-16243913)
chr2 (1-85)||(38917568-38917652)
chr2 (1-87)||(12337983-12338069)
chr2 (1-85)||(9047801-9047885)
chr2 (1-85)||(15372226-15372310)
chr2 (1-83)||(30099228-30099310)
chr2 (1-87)||(41492942-41493028)
chr2 (1-85)||(12170445-12170529)
chr2 (1-57)||(44804624-44804680)
chr2 (5-79)||(31150659-31150733)
chr2 (40-85)||(41492896-41492941)
chr2 (1-63)||(41453081-41453143)
chr2 (40-85)||(3055643-3055688)
chr2 (40-85)||(6648519-6648564)
chr2 (40-85)||(9047755-9047800)
chr2 (40-85)||(12337937-12337982)
chr2 (40-85)||(13197710-13197755)
chr2 (40-85)||(15372311-15372356)
chr2 (40-85)||(15896927-15896972)
chr2 (40-85)||(37990013-37990058)
chr2 (40-85)||(38917522-38917567)
chr2 (40-85)||(41478639-41478684)
chr2 (40-85)||(44398771-44398816)
[»] chr3 (44 HSPs)
chr3 (1-88)||(10297976-10298063)
chr3 (1-90)||(22721926-22722015)
chr3 (1-90)||(48340392-48340481)
chr3 (1-85)||(4238594-4238678)
chr3 (1-85)||(19557098-19557182)
chr3 (1-85)||(42507401-42507485)
chr3 (1-85)||(44785442-44785526)
chr3 (1-85)||(49823427-49823511)
chr3 (1-86)||(17653711-17653796)
chr3 (1-86)||(51406672-51406757)
chr3 (1-85)||(2787878-2787962)
chr3 (1-85)||(8437425-8437509)
chr3 (1-85)||(8817432-8817516)
chr3 (1-85)||(21295372-21295456)
chr3 (1-85)||(34080076-34080160)
chr3 (1-85)||(37508921-37509005)
chr3 (1-85)||(38964392-38964476)
chr3 (1-85)||(9111540-9111624)
chr3 (1-85)||(36095726-36095810)
chr3 (1-85)||(40691042-40691126)
chr3 (1-85)||(42170392-42170476)
chr3 (1-85)||(46208030-46208114)
chr3 (2-85)||(35513473-35513556)
chr3 (7-80)||(6013388-6013461)
chr3 (1-78)||(33942978-33943055)
chr3 (40-86)||(21295325-21295371)
chr3 (40-85)||(4238679-4238724)
chr3 (40-85)||(17653797-17653842)
chr3 (40-85)||(37509006-37509051)
chr3 (40-85)||(46208115-46208160)
chr3 (40-88)||(38964477-38964525)
chr3 (30-96)||(33128196-33128261)
chr3 (40-85)||(6013336-6013381)
chr3 (40-85)||(10298064-10298109)
chr3 (40-85)||(19557052-19557097)
chr3 (40-85)||(34080030-34080075)
chr3 (40-85)||(40690996-40691041)
chr3 (40-85)||(48340482-48340527)
chr3 (40-85)||(49823381-49823426)
chr3 (40-80)||(9111499-9111539)
chr3 (41-85)||(9213602-9213646)
chr3 (40-80)||(42507360-42507400)
chr3 (1-73)||(43323072-43323144)
chr3 (41-85)||(51406759-51406803)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-90)||(23780-23869)
[»] chr8 (34 HSPs)
chr8 (1-86)||(3304324-3304409)
chr8 (1-90)||(6552650-6552739)
chr8 (1-86)||(15888398-15888483)
chr8 (1-86)||(32114521-32114606)
chr8 (1-86)||(44498233-44498318)
chr8 (1-85)||(54658-54742)
chr8 (1-85)||(2890208-2890292)
chr8 (1-85)||(7785824-7785908)
chr8 (1-85)||(7805745-7805829)
chr8 (1-85)||(12343186-12343270)
chr8 (1-85)||(43199400-43199484)
chr8 (1-85)||(12763700-12763784)
chr8 (1-85)||(31654613-31654697)
chr8 (1-85)||(32211409-32211493)
chr8 (1-85)||(39571249-39571333)
chr8 (1-87)||(7012169-7012255)
chr8 (4-85)||(25601049-25601130)
chr8 (1-85)||(33289307-33289391)
chr8 (1-85)||(13578857-13578941)
chr8 (26-85)||(4245652-4245711)
chr8 (1-89)||(8587166-8587254)
chr8 (1-82)||(28463614-28463695)
chr8 (40-87)||(6552740-6552787)
chr8 (40-87)||(33289259-33289306)
chr8 (31-85)||(25601000-25601054)
chr8 (31-85)||(27422266-27422320)
chr8 (40-85)||(54612-54657)
chr8 (40-85)||(2890162-2890207)
chr8 (40-85)||(7785778-7785823)
chr8 (40-85)||(31654698-31654743)
chr8 (40-85)||(39571203-39571248)
chr8 (40-85)||(43199354-43199399)
chr8 (40-93)||(44498179-44498232)
chr8 (41-85)||(32211363-32211407)
[»] chr4 (40 HSPs)
chr4 (1-86)||(20538732-20538817)
chr4 (1-90)||(48336258-48336347)
chr4 (1-85)||(3372121-3372205)
chr4 (1-85)||(26231577-26231661)
chr4 (1-85)||(47833611-47833695)
chr4 (1-85)||(53337370-53337454)
chr4 (4-85)||(24704370-24704451)
chr4 (1-85)||(3904729-3904813)
chr4 (1-85)||(3992976-3993060)
chr4 (1-85)||(6121939-6122023)
chr4 (1-85)||(7579310-7579394)
chr4 (1-85)||(33551201-33551285)
chr4 (1-85)||(42797732-42797816)
chr4 (1-85)||(43900549-43900633)
chr4 (1-85)||(46797725-46797809)
chr4 (1-85)||(47838663-47838747)
chr4 (1-85)||(52756675-52756759)
chr4 (1-90)||(51894628-51894717)
chr4 (1-85)||(33621796-33621880)
chr4 (1-85)||(41469812-41469896)
chr4 (1-90)||(5986871-5986960)
chr4 (1-85)||(40913235-40913319)
chr4 (1-73)||(3422073-3422144)
chr4 (1-73)||(41615722-41615794)
chr4 (31-85)||(4780371-4780425)
chr4 (3-85)||(25855083-25855165)
chr4 (1-74)||(29845656-29845728)
chr4 (40-85)||(42797817-42797862)
chr4 (1-70)||(50430464-50430533)
chr4 (40-88)||(6121890-6121938)
chr4 (40-87)||(46797810-46797857)
chr4 (40-87)||(47833696-47833743)
chr4 (40-85)||(3422145-3422190)
chr4 (40-85)||(41469766-41469811)
chr4 (40-85)||(47838617-47838662)
chr4 (40-85)||(51894582-51894627)
chr4 (41-85)||(3904683-3904727)
chr4 (41-85)||(20538686-20538730)
chr4 (2-70)||(31013036-31013104)
chr4 (40-80)||(40913194-40913234)
[»] chr1 (38 HSPs)
chr1 (1-86)||(31842841-31842926)
chr1 (1-90)||(39402012-39402101)
chr1 (1-90)||(47216745-47216834)
chr1 (1-85)||(9981647-9981731)
chr1 (1-85)||(26471111-26471195)
chr1 (1-85)||(27159404-27159488)
chr1 (1-85)||(44668139-44668223)
chr1 (1-86)||(23278047-23278132)
chr1 (1-85)||(1050888-1050972)
chr1 (1-85)||(11795933-11796017)
chr1 (1-85)||(14984837-14984921)
chr1 (1-85)||(34042696-34042780)
chr1 (1-85)||(44955252-44955336)
chr1 (1-86)||(47777527-47777612)
chr1 (1-85)||(12483674-12483758)
chr1 (1-85)||(47588383-47588467)
chr1 (1-73)||(25694331-25694403)
chr1 (1-79)||(47969700-47969779)
chr1 (1-85)||(17556752-17556837)
chr1 (1-85)||(11897054-11897138)
chr1 (4-85)||(16448157-16448238)
chr1 (40-85)||(11897139-11897184)
chr1 (1-70)||(11989796-11989865)
chr1 (1-85)||(12213520-12213604)
chr1 (40-79)||(44955212-44955251)
chr1 (40-86)||(27159357-27159403)
chr1 (31-77)||(37552217-37552263)
chr1 (40-90)||(39401961-39402011)
chr1 (40-86)||(44668092-44668138)
chr1 (40-85)||(11796018-11796063)
chr1 (40-85)||(12483628-12483673)
chr1 (40-85)||(14984922-14984967)
chr1 (40-85)||(17556838-17556883)
chr1 (40-85)||(25694404-25694449)
chr1 (40-85)||(31842795-31842840)
chr1 (4-85)||(37552141-37552222)
chr1 (40-85)||(47777481-47777526)
chr1 (40-80)||(9981732-9981772)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-85)||(12860-12944)
[»] chr6 (31 HSPs)
chr6 (1-85)||(2830335-2830419)
chr6 (1-85)||(6330115-6330199)
chr6 (1-85)||(8099530-8099614)
chr6 (1-85)||(8383015-8383099)
chr6 (1-85)||(11572191-11572275)
chr6 (1-85)||(26602323-26602407)
chr6 (1-85)||(33052840-33052924)
chr6 (1-85)||(6143554-6143638)
chr6 (1-85)||(13853639-13853723)
chr6 (1-85)||(35031047-35031131)
chr6 (1-90)||(6068561-6068650)
chr6 (1-85)||(9644696-9644780)
chr6 (1-85)||(9650713-9650797)
chr6 (1-85)||(8417839-8417923)
chr6 (1-85)||(13043758-13043842)
chr6 (1-69)||(28747180-28747248)
chr6 (3-55)||(17992018-17992070)
chr6 (6-77)||(6068991-6069062)
chr6 (1-87)||(22896469-22896546)
chr6 (2-80)||(14936504-14936582)
chr6 (40-95)||(8382959-8383014)
chr6 (40-85)||(2830420-2830465)
chr6 (40-85)||(3788122-3788167)
chr6 (40-85)||(6330200-6330245)
chr6 (40-85)||(8099615-8099660)
chr6 (40-85)||(9644781-9644826)
chr6 (40-85)||(9650798-9650843)
chr6 (40-85)||(11572145-11572190)
chr6 (40-85)||(13853593-13853638)
chr6 (40-85)||(26602408-26602453)
chr6 (41-85)||(35031001-35031045)
[»] chr5 (27 HSPs)
chr5 (1-85)||(9395350-9395434)
chr5 (1-85)||(37149001-37149085)
chr5 (1-90)||(26350396-26350485)
chr5 (1-85)||(582989-583073)
chr5 (1-85)||(11795168-11795252)
chr5 (1-85)||(20848074-20848158)
chr5 (1-85)||(23359942-23360026)
chr5 (1-85)||(36563584-36563668)
chr5 (1-85)||(41989453-41989537)
chr5 (1-85)||(13033051-13033135)
chr5 (1-85)||(13103024-13103108)
chr5 (1-85)||(17025624-17025708)
chr5 (1-85)||(37641953-37642038)
chr5 (1-85)||(4443960-4444044)
chr5 (1-60)||(21575971-21576030)
chr5 (7-85)||(38361743-38361821)
chr5 (1-78)||(13539913-13539986)
chr5 (1-60)||(6126849-6126908)
chr5 (40-85)||(23360027-23360072)
chr5 (40-85)||(37148955-37149000)
chr5 (41-79)||(11574166-11574204)
chr5 (40-85)||(6126909-6126954)
chr5 (40-85)||(9395435-9395480)
chr5 (40-85)||(13103109-13103154)
chr5 (40-85)||(17025709-17025754)
chr5 (40-85)||(36563538-36563583)
chr5 (40-85)||(41989407-41989452)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-85)||(1335-1419)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-85)||(6177-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-85)||(49505-49589)
scaffold0009 (40-85)||(49590-49635)
[»] scaffold0415 (1 HSPs)
scaffold0415 (1-74)||(13773-13845)


Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 159 - 579
Target Start/End: Complemental strand, 43699921 - 43699500
Alignment:
Q  159 ttattttaaaattcatccatgattacaatgaataactattttaactatcataataatgttacaatagtatt-cctctaaataaggttattgtgtgactgt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  43699921 ttattttaaaattcatccatgattacaatgaataactattttaattatcataataatgttacaatagtatttcctctaaataaggttatgttgtgactgt 43699822  T
Q  258 ccttatagacgtccgtggagaagggttcatagctcaagacattggatttgtaaactcagcggggatagatgcaggtcctgcaatggccgttcgaaacgag 357  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43699821 ccttatagacgtccgtggagaagggctcatagctcaagacattggatttgtgaactcagcggggacagatgcaggtcctgcaatggccgttcgaaacgag 43699722  T
Q  358 gcaaacaatagcatattccttcggtgctccattcaaggattccaagacaccttgtttgctgtttccggaagacaattctacaaaaactgtgaaatctatg 457  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43699721 gcaaacaatagtatattccttcggtgctccattcaaggattccaagacaccttatttgctgtttccggaagacaattctacaaaaactgtgaaatatatg 43699622  T
Q  458 gtatcgtcgacttcatcttcggcaacgctgcagctgtatttcaagactgtatggtttatgcacgctatcggcagtttgggggaataaccgctcagtcacg 557  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || | | ||||| || |||||    
T  43699621 gtaccgtcgacttcatcttcggcaacgctgcagctgtatttcaagactgtatggtttatgcacgctatcgacagttcgtggtattcaccgcacaatcacg 43699522  T
Q  558 tggaaatccatctgaaaaaaca 579  Q
    ||||||||||||||||||||||    
T  43699521 tggaaatccatctgaaaaaaca 43699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28536797 - 28536881
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  28536797 ttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7240833 - 7240744
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7240833 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 7240744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31319445 - 31319534
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  31319445 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 31319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1565775 - 1565859
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1565775 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1738493 - 1738577
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1738493 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38063959 - 38064043
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38063959 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 46840944 - 46840860
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46840944 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36583479 - 36583393
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36583479 ttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtact 36583393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9268840 - 9268751
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  9268840 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtattata 9268751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38441544 - 38441455
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  38441544 ttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagtactata 38441455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7482309 - 7482225
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7482309 ttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23314185 - 23314269
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23314185 ttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 94364 - 94451
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtacta 88  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  94364 ttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtacta 94451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36016242 - 36016329
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtacta 88  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  36016242 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtacta 36016329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22285783 - 22285694
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  22285783 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattata 22285694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4790332 - 4790248
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||| | |||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||    
T  4790332 ttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 43700086 - 43700011
Alignment:
Q  84 tactatactacatatatatcacatgattggagtaaaatttgctaggtagacccagcacaatgcatgtataattagt 159  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  43700086 tactatactacgtatatatcacatgactggagtgaaatttgctagggagacccagcacaatgcatgtataattagt 43700011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33418460 - 33418392
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaat 69  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  33418460 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9575493 - 9575409
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| || |||||| ||  |||||||||||| || ||||| ||| |||||||||| |||| ||||    
T  9575493 ttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 38441545 - 38441595
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||||||||    
T  38441545 cttttgttgacccaaaattctcttataaataggaccggaggaagtactata 38441595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40840165 - 40840243
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggag 79  Q
    ||||||||  |||||||||||||| ||||||||||||   ||||||| || ||| ||||| || |||||||||||||||    
T  40840165 ttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 1738492 - 1738447
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  1738492 cttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 7240834 - 7240879
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  7240834 cttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 7482310 - 7482355
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  7482310 cttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 9268841 - 9268886
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  9268841 cttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 22285784 - 22285829
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  22285784 cttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 23314184 - 23314139
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  23314184 cttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 46840945 - 46840990
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  46840945 cttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 271 - 579
Target Start/End: Complemental strand, 45514610 - 45514302
Alignment:
Q  271 cgtggagaagggttcatagctcaagacattggatttgtaaactcagcggggatagatgcaggtcctgcaatggccgttcgaaacgaggcaaacaatagca 370  Q
    ||||||||||||||||| |||||| ||||||||||||| ||| |||||| | |||||||| |  ||||| |||||||||| ||||| |||||||| ||||    
T  45514610 cgtggagaagggttcatggctcaaaacattggatttgtgaacacagcggagctagatgcaagcgctgcagtggccgttcggaacgaagcaaacaacagca 45514511  T
Q  371 tattccttcggtgctccattcaaggattccaagacaccttgtttgctgtttccggaagacaattctacaaaaactgtgaaatctatggtatcgtcgactt 470  Q
    ||||| | |  |||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| || || |  ||||||||    
T  45514510 tattcttccaatgctccatccaaggattccaagacaccttgtgggctgtttccggtagacaattctacaaaaactgtgaaatatacggcactgtcgactt 45514411  T
Q  471 catcttcggcaacgctgcagctgtatttcaagactgtatggtttatgcacgctatcggcagtttgggggaataaccgctcagtcacgtggaaatccatct 570  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| |  | | ||||| |||||||||| || ||||| |    
T  45514410 catctacggcaacgctgccgctgtatttcaagactgcatggtttatgcacgctatagacagtttgtgacattcaccgcacagtcacgtgaaagtccatat 45514311  T
Q  571 gaaaaaaca 579  Q
    |||||||||    
T  45514310 gaaaaaaca 45514302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13197756 - 13197842
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13197756 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtact 13197842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3055642 - 3055558
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3055642 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4683978 - 4684062
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4683978 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15896926 - 15896842
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15896926 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37990059 - 37990143
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37990059 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41478685 - 41478769
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  41478685 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44397631 - 44397547
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44397631 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44398770 - 44398686
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44398770 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16044363 - 16044447
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16044363 ttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37666656 - 37666740
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37666656 ttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6648565 - 6648649
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||||    
T  6648565 ttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13344568 - 13344484
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||    
T  13344568 ttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

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Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16243829 - 16243913
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||    
T  16243829 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

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Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38917568 - 38917652
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  38917568 ttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12337983 - 12338069
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| | |||||||||| |||||||||||||||    
T  12337983 ttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagtact 12338069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9047801 - 9047885
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||| |||||||| |||||    
T  9047801 ttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagta 9047885  T

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Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15372310 - 15372226
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  15372310 ttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T

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Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30099228 - 30099310
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtag 83  Q
    |||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||    
T  30099228 ttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

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Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41492942 - 41493028
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||| |||||    
T  41492942 ttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggactgaaggttgtact 41493028  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12170445 - 12170529
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||| |||||||||||||| ||||||||||||  ||||| ||||||||| ||||| || ||||||||| |||||| ||||    
T  12170445 ttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44804624 - 44804680
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatt 57  Q
    |||||||||||||||||||||||| |||||||||||||  || ||||||||||||||    
T  44804624 ttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 31150733 - 31150659
Alignment:
Q  5 tgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggag 79  Q
    |||||||||||||||||| | |||||||||||   |||||||||||  || ||||| |||||||||||| |||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 41492941 - 41492896
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  41492941 cttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41453143 - 41453081
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctatt 63  Q
    ||||||||| | |||||||||||| ||||||||||||  ||||| ||||||||| ||| ||||    
T  41453143 ttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaactttttatt 41453081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 3055643 - 3055688
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  3055643 cttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 6648564 - 6648519
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  6648564 cttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 9047800 - 9047755
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  9047800 cttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 12337982 - 12337937
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  12337982 cttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 13197755 - 13197710
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  13197755 cttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 15372311 - 15372356
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  15372311 cttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 15896927 - 15896972
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  15896927 cttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 37990058 - 37990013
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37990058 cttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 38917567 - 38917522
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  38917567 cttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 41478684 - 41478639
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  41478684 cttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 44398771 - 44398816
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  44398771 cttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 7e-35; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10298063 - 10297976
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtacta 88  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10298063 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtacta 10297976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22722015 - 22721926
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  22722015 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 22721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48340481 - 48340392
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  48340481 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagtactata 48340392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4238678 - 4238594
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4238678 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19557098 - 19557182
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19557098 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42507401 - 42507485
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42507401 ttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44785442 - 44785526
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44785442 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 49823427 - 49823511
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  49823427 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17653796 - 17653711
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17653796 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtac 17653711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 51406757 - 51406672
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  51406757 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtac 51406672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2787878 - 2787962
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||    
T  2787878 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8437509 - 8437425
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8437509 ttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8817432 - 8817516
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8817432 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21295372 - 21295456
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21295372 ttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34080076 - 34080160
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34080076 ttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37509005 - 37508921
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  37509005 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38964476 - 38964392
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  38964476 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9111540 - 9111624
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  9111540 ttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36095726 - 36095810
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  36095726 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40691042 - 40691126
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||||| |||||    
T  40691042 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42170392 - 42170476
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  42170392 ttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 46208114 - 46208030
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  46208114 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 35513556 - 35513473
Alignment:
Q  2 tgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  35513556 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 6013388 - 6013461
Alignment:
Q  7 tatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||    
T  6013388 tatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33942978 - 33943055
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccgga 78  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||||||| ||||    
T  33942978 ttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 21295371 - 21295325
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||||    
T  21295371 cttttgttgacctaaaattctcttataaataggaccggagggagtac 21295325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 4238679 - 4238724
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  4238679 cttttgttgaccaaaaattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 17653797 - 17653842
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  17653797 cttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 37509006 - 37509051
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  37509006 cttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 46208115 - 46208160
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  46208115 cttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 38964477 - 38964525
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtacta 88  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||||||    
T  38964477 cttttgttgaccaaaaattctcttataaataggaccggagggagtacta 38964525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 33128261 - 33128196
Alignment:
Q  30 aatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactatactacat 96  Q
    ||||||||  ||||||||||||||||||||| |||||| |||||| ||||  |||| ||||||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggagagagta-tatactacat 33128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 6013381 - 6013336
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  6013381 cttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 10298064 - 10298109
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  10298064 cttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 19557097 - 19557052
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  19557097 cttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 34080075 - 34080030
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  34080075 cttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 40691041 - 40690996
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  40691041 cttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 48340482 - 48340527
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  48340482 cttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 49823426 - 49823381
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  49823426 cttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 9111539 - 9111499
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||||| ||| |||| |||||||||||||||||||    
T  9111539 cttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 9213602 - 9213646
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||| | ||||||||||| ||||| ||||    
T  9213602 ttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 42507400 - 42507360
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||||| ||| |||| |||||||||||||||||||    
T  42507400 cttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43323144 - 43323072
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaatagga 73  Q
    ||||||||| | |||||||||| | |||||||||||   |||||||||||| || ||| | ||||||||||||    
T  43323144 ttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 51406759 - 51406803
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23869 - 23780
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  23869 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 23780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3304324 - 3304409
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3304324 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 3304409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6552739 - 6552650
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  6552739 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 6552650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15888398 - 15888483
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  15888398 ttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 15888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32114521 - 32114606
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  32114521 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 32114606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44498233 - 44498318
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  44498233 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 44498318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54658 - 54742
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  54658 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2890208 - 2890292
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2890208 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7785824 - 7785908
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7785824 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7805745 - 7805829
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  7805745 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12343186 - 12343270
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12343186 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43199400 - 43199484
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  43199400 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12763700 - 12763784
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12763700 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31654697 - 31654613
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31654697 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32211409 - 32211493
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  32211409 ttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39571249 - 39571333
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  39571249 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7012255 - 7012169
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7012255 ttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagtact 7012169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 25601049 - 25601130
Alignment:
Q  4 atgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||    
T  25601049 atgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33289307 - 33289391
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||    
T  33289307 ttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13578941 - 13578857
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||| |||||||||| || ||||||||||    
T  13578941 ttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 4245652 - 4245711
Alignment:
Q  26 tccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4245652 tccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8587254 - 8587166
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactat 89  Q
    |||||||||||||||||||||| | || ||||||||   |||||||||||| || ||||| ||||||||||||||||||| ||||||||    
T  8587254 ttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagtactat 8587166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28463695 - 28463614
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggta 82  Q
    ||||| ||||| ||| |||||||| |||||||||||   |||||||||||| || ||||| |||||||||||||||||||||    
T  28463695 ttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 6552740 - 6552787
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  6552740 cttttgttgacccaaaattctcttataaataggaccggagggagtact 6552787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 33289306 - 33289259
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  33289306 cttttgttgacccaaaattctcttataaataggaccggagggagtact 33289259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 25601054 - 25601000
Alignment:
Q  31 atacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||  |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 27422266 - 27422320
Alignment:
Q  31 atacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||  ||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 54657 - 54612
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  54657 cttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 2890207 - 2890162
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  2890207 cttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 7785823 - 7785778
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  7785823 cttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 31654698 - 31654743
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654698 cttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 39571248 - 39571203
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  39571248 cttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 43199399 - 43199354
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  43199399 cttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 44498232 - 44498179
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtactatacta 93  Q
    ||||| |||||| ||| |||| ||||||||||||||||||| |||| |||||||    
T  44498232 cttttattgacccaaaattctcttataaataggaccggagggagtattatacta 44498179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32211407 - 32211363
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20538732 - 20538817
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  20538732 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 20538817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48336347 - 48336258
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  48336347 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattata 48336258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3372205 - 3372121
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3372205 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26231661 - 26231577
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26231661 ttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 47833695 - 47833611
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  47833695 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 53337454 - 53337370
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  53337454 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 24704451 - 24704370
Alignment:
Q  4 atgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  24704451 atgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3904729 - 3904813
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3904729 ttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3993060 - 3992976
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  3993060 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6121939 - 6122023
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  6121939 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7579394 - 7579310
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  7579394 ttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33551285 - 33551201
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33551285 ttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42797816 - 42797732
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  42797816 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43900633 - 43900549
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43900633 ttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 46797809 - 46797725
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  46797809 ttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 47838663 - 47838747
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||||    
T  47838663 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 52756759 - 52756675
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  52756759 ttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 51894628 - 51894717
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    ||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  51894628 ttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtattata 51894717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33621880 - 33621796
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||| | ||||||    
T  33621880 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41469812 - 41469896
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  41469812 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5986960 - 5986871
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||| | ||||||||||| ||||    
T  5986960 ttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagtaatata 5986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40913235 - 40913319
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||| |||| ||||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  40913235 ttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3422144 - 3422073
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaatagga 73  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||| ||||||||||||    
T  3422144 ttgatgtatctagttaaaaattcagttcaaatacattc-attttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41615722 - 41615794
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaatagga 73  Q
    ||||||||| |||||||||||| | ||||||||||||  ||||||||||||||| ||||| ||||||||||||    
T  41615722 ttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  31 atacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||  |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25855165 - 25855083
Alignment:
Q  3 gatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||| | |||||||||||| ||||||||||||  |||||||||||  || ||||| | |||||||||||| |||| ||||    
T  25855165 gatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29845728 - 29845656
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggac 74  Q
    ||||||||| |||||||||||||| | |||||| |||   |||||||||||||||||||| |||||| ||||||    
T  29845728 ttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 42797817 - 42797862
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  42797817 cttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50430464 - 50430533
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaata 70  Q
    ||||||||||| |||||||||||| |||||||||||   |||||||||||| || || || |||||||||    
T  50430464 ttgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 6121938 - 6121890
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtacta 88  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||||||    
T  6121938 cttttgttgacccaaaattctcttataaataggaccggagggagtacta 6121890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 46797810 - 46797857
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  46797810 cttttgttgacccaaaattctcttataaataggaccggagggagtact 46797857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 47833696 - 47833743
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||    
T  47833696 cttttgttgacccaaaattctcttataaataggaccggagggagtact 47833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 3422145 - 3422190
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  3422145 cttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 41469811 - 41469766
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  41469811 cttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 47838662 - 47838617
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  47838662 cttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 51894627 - 51894582
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  51894627 cttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 3904727 - 3904683
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 31013104 - 31013036
Alignment:
Q  2 tgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaata 70  Q
    |||||||||||||||| |||| |  ||||||||||   |||||||||| |||||| ||| |||||||||    
T  31013104 tgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 40913234 - 40913194
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  40913234 cttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 31842841 - 31842926
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  31842841 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtac 31842926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 39402012 - 39402101
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  39402012 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtata 39402101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47216745 - 47216834
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  47216745 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatata 47216834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9981731 - 9981647
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9981731 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26471111 - 26471195
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  26471111 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27159404 - 27159488
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27159404 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44668139 - 44668223
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44668139 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23278047 - 23278132
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  23278047 ttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtac 23278132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1050972 - 1050888
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1050972 ttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11796017 - 11795933
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11796017 ttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14984921 - 14984837
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||    
T  14984921 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34042780 - 34042696
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  34042780 ttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44955252 - 44955336
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  44955252 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47777527 - 47777612
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  47777527 ttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagtac 47777612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12483674 - 12483758
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||| ||||| |||||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12483674 ttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 47588383 - 47588467
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||    
T  47588383 ttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25694403 - 25694331
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaatagga 73  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||| ||||||||||||    
T  25694403 ttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47969779 - 47969700
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttct-attataaataggaccggag 79  Q
    |||||||||||||||||||||||| || |||||||||  |||||||||||||||||||||  ||||||||||||||||||    
T  47969779 ttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17556837 - 17556752
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaataca-ttcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||| ||  ||||||||||||||| ||||| |||||||||||||| |||| ||||    
T  17556837 ttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11897138 - 11897054
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||  |||||||||||| | || ||||||   ||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  11897138 ttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 16448157 - 16448238
Alignment:
Q  4 atgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||| ||| |||||||| |||| ||||||   |||||||||||| || ||||| ||||||||||||||||||| ||||    
T  16448157 atgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 11897139 - 11897184
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  11897139 cttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11989865 - 11989796
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaata 70  Q
    ||||||||| | |||||||||||| |||||||| ||| | ||||||||||| || ||||| |||||||||    
T  11989865 ttgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12213520 - 12213604
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||| ||| |||||||||||||| || |||||||||   ||||||||||||||  |||| ||||||||| ||| ||||| ||||    
T  12213520 ttgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 44955251 - 44955212
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggag 79  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  44955251 cttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 27159403 - 27159357
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  27159403 cttttgttgacccaaaattctcttataaataggaccggagggagtac 27159357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  31 atacattcgcttttgttgacctaaatttctattataaataggaccgg 77  Q
    ||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 39402011 - 39401961
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||| ||||    
T  39402011 cttttgttgacccaaaattctcttataaataggaccggagggagtaatata 39401961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 44668138 - 44668092
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtac 86  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  44668138 cttttgttgacccaaaattctcttataaataggaccggagggagtac 44668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 11796018 - 11796063
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  11796018 cttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 12483673 - 12483628
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  12483673 cttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 14984922 - 14984967
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  14984922 cttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 17556838 - 17556883
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| || ||||| ||||||||||||||||||| ||||    
T  17556838 cttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 25694404 - 25694449
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  25694404 cttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 31842840 - 31842795
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31842840 cttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 37552222 - 37552141
Alignment:
Q  4 atgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||| |||||||||||| |||| ||||||   || ||||||||  || ||| | ||||||||||||||||||| ||||    
T  37552222 atgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 47777526 - 47777481
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  47777526 cttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 9981732 - 9981772
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||||| ||| |||| |||||||||||||||||||    
T  9981732 cttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12944 - 12860
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12944 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2830419 - 2830335
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2830419 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6330199 - 6330115
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6330199 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8099614 - 8099530
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8099614 ttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8383015 - 8383099
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8383015 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11572191 - 11572275
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11572191 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26602407 - 26602323
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  26602407 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33052840 - 33052924
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33052840 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6143638 - 6143554
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||    
T  6143638 ttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13853639 - 13853723
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  13853639 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35031047 - 35031131
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  35031047 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6068650 - 6068561
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||| ||||    
T  6068650 ttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtattata 6068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9644780 - 9644696
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||||    
T  9644780 ttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9650797 - 9650713
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||||||||||||  || ||||||||||||||||| ||||||||||||||||||||||||    
T  9650797 ttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8417839 - 8417923
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||| ||||    
T  8417839 ttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13043842 - 13043758
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||    
T  13043842 ttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28747180 - 28747248
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaat 69  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||    
T  28747180 ttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 17992070 - 17992018
Alignment:
Q  3 gatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaa 55  Q
    |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  17992070 gatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 6068991 - 6069062
Alignment:
Q  6 gtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccgg 77  Q
    ||||| ||||||||||| |  |||||||||||  ||||||||||||||||| ||| ||||||||||||||||    
T  6068991 gtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22896546 - 22896469
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtact 87  Q
    |||||||||||||||||||||||| |||||||||         |||||||||||| |||| ||||||||||||||||||| ||||||    
T  22896546 ttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagtact 22896469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 14936504 - 14936582
Alignment:
Q  2 tgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggagg 80  Q
    |||||||||||||||| ||||  ||||||||||||   || ||||||||| |||| ||| |||||||||||||| ||||    
T  14936504 tgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 8383014 - 8382959
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagtactatactaca 95  Q
    |||||||||||| ||| |||| ||||||||||||||||||| |||| |||| ||||    
T  8383014 cttttgttgacccaaaattctcttataaataggaccggagggagtagtataataca 8382959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 2830420 - 2830465
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  2830420 cttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 3788122 - 3788167
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  3788122 cttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 6330200 - 6330245
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  6330200 cttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 8099615 - 8099660
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  8099615 cttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 9644781 - 9644826
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  9644781 cttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 9650798 - 9650843
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  9650798 cttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 11572190 - 11572145
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  11572190 cttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 13853638 - 13853593
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  13853638 cttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 26602408 - 26602453
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  26602408 cttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 35031045 - 35031001
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9395434 - 9395350
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9395434 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37149001 - 37149085
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37149001 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26350396 - 26350485
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagtactata 90  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  26350396 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagtactata 26350485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 583073 - 582989
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  583073 ttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11795252 - 11795168
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||    
T  11795252 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20848158 - 20848074
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  20848158 ttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23360026 - 23359942
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  23360026 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36563584 - 36563668
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||    
T  36563584 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41989453 - 41989537
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41989453 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13033135 - 13033051
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13033135 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13103108 - 13103024
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  13103108 ttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17025708 - 17025624
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |  |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  17025708 ttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37642038 - 37641953
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttg-ttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||| |||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||    
T  37642038 ttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4444044 - 4443960
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  4444044 ttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

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Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21576030 - 21575971
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttct 60  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  21576030 ttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttct 21575971  T

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Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 38361743 - 38361821
Alignment:
Q  7 tatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||| ||||||||||| ||||||||||||| ||||| ||||||||||||| | |||||||||||| |||||| ||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13539913 - 13539986
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccgga 78  Q
    |||||||||||||||||||||||| || ||||  |||    ||||||||||||||||||| |||||||||||||||||    
T  13539913 ttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

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Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6126908 - 6126849
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttct 60  Q
    |||||||||||||||||||||| | |||||||||||||  ||||||||| ||||||||||    
T  6126908 ttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttct 6126849  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 23360027 - 23360072
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  23360027 cttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 37149000 - 37148955
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37149000 cttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  41 ttttgttgacctaaatttctattataaataggaccggag 79  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 6126909 - 6126954
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  6126909 cttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 9395435 - 9395480
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  9395435 cttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 13103109 - 13103154
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  13103109 cttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 17025709 - 17025754
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  17025709 cttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 36563583 - 36563538
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  36563583 cttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 41989452 - 41989407
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  41989452 cttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

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Target: scaffold1707 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1419 - 1335
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  1419 ttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagta 1335  T

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Target: scaffold0464 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6177 - 6261
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  6177 ttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

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Target: scaffold0009 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 49589 - 49505
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  49589 ttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 49590 - 49635
Alignment:
Q  40 cttttgttgacctaaatttctattataaataggaccggaggtagta 85  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  49590 cttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold0415 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13773 - 13845
Alignment:
Q  1 ttgatgtatctagttaaaaattcattccaaatacattcgcttttgttgacctaaatttctattataaataggac 74  Q
    ||||||||| |||||||||||||| | |||||| |||   |||||||||||||||||||| |||||| ||||||    
T  13773 ttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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