View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15555_high_15 (Length: 287)
Name: NF15555_high_15
Description: NF15555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15555_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 8016888 - 8017164
Alignment:
| Q |
1 |
ttagccactgattgataaatgttgttaaagataaattagatacggttattgttaactattgcttacaatttcttacctgagtctactgaaaaaattcaaa |
100 |
Q |
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| T |
8016888 |
ttagccactgattgataaatgttgttaaagataaattagatacggttattgttaactagtgcttacaatttcttacctgagtctactcaaaaaattcaaa |
8016987 |
T |
|
| Q |
101 |
gttttagtttgccattagacctaaatcttaccttgtttaataaggttacgttaacaagtgctctaaaaacatttgttaagaaaaataaaagtagtagatt |
200 |
Q |
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| T |
8016988 |
gttttagtttgacattagacctaaatcttaccttgtttaataaggttatgttaacaagtgctctaaaaacatttgttaagaaaaataaaagtagtaaatt |
8017087 |
T |
|
| Q |
201 |
tacattaaaatcaataagtttttaatttttaaaaactgaattcactatttttcactcaacttcgctcatgatttcat |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8017088 |
tacattaaaatcaataagtttttaatttttaaaaactgaattcactatttttcactcaacttcgctcatgatttcat |
8017164 |
T |
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