View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15555_low_5 (Length: 459)

Name: NF15555_low_5
Description: NF15555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15555_low_5
NF15555_low_5
[»] chr5 (55 HSPs)
chr5 (17-448)||(10237386-10237814)
chr5 (48-418)||(22616494-22616861)
chr5 (52-418)||(36055556-36055922)
chr5 (81-416)||(41417289-41417625)
chr5 (58-376)||(31878425-31878745)
chr5 (42-416)||(33163515-33163890)
chr5 (48-417)||(21320752-21321121)
chr5 (42-338)||(27579108-27579403)
chr5 (239-365)||(25653637-25653763)
chr5 (59-195)||(12080422-12080558)
chr5 (63-200)||(25654568-25654704)
chr5 (239-415)||(13380498-13380678)
chr5 (48-197)||(8762873-8763022)
chr5 (239-419)||(26411292-26411476)
chr5 (58-197)||(33752393-33752534)
chr5 (69-197)||(13381123-13381251)
chr5 (245-421)||(33752923-33753096)
chr5 (67-236)||(29766498-29766667)
chr5 (239-350)||(10053291-10053402)
chr5 (42-197)||(33848018-33848173)
chr5 (56-197)||(13888329-13888470)
chr5 (239-364)||(33848556-33848681)
chr5 (77-197)||(12164016-12164136)
chr5 (370-418)||(39572819-39572867)
chr5 (370-416)||(25501053-25501099)
chr5 (48-177)||(3014683-3014811)
chr5 (370-418)||(8742014-8742062)
chr5 (59-197)||(10053820-10053952)
chr5 (370-418)||(19119859-19119907)
chr5 (381-420)||(14409464-14409503)
chr5 (370-421)||(15724487-15724538)
chr5 (239-325)||(12081136-12081222)
chr5 (370-419)||(7693229-7693278)
chr5 (369-418)||(12910350-12910399)
chr5 (342-420)||(21266016-21266098)
chr5 (52-197)||(26412052-26412197)
chr5 (370-418)||(8466745-8466793)
chr5 (370-421)||(16004503-16004555)
chr5 (370-418)||(27330306-27330354)
chr5 (370-418)||(35826610-35826658)
chr5 (239-285)||(13887374-13887420)
chr5 (369-419)||(22019631-22019681)
chr5 (370-420)||(40133383-40133433)
chr5 (381-418)||(13956483-13956520)
chr5 (383-420)||(23116362-23116399)
chr5 (370-419)||(26317811-26317860)
chr5 (370-419)||(36866761-36866810)
chr5 (37-82)||(36867140-36867185)
chr5 (386-422)||(2888469-2888505)
chr5 (370-418)||(5112440-5112488)
chr5 (370-418)||(12164916-12164964)
chr5 (370-418)||(22974209-22974257)
chr5 (370-418)||(36860423-36860471)
chr5 (42-82)||(36860802-36860842)
chr5 (370-409)||(43308778-43308818)
[»] chr2 (57 HSPs)
chr2 (42-418)||(6177775-6178151)
chr2 (42-416)||(41643874-41644250)
chr2 (49-418)||(19073357-19073722)
chr2 (75-374)||(18059066-18059366)
chr2 (49-414)||(18947288-18947642)
chr2 (42-418)||(41713164-41713539)
chr2 (99-376)||(15650890-15651168)
chr2 (67-376)||(18779103-18779407)
chr2 (48-406)||(27138700-27139056)
chr2 (176-418)||(34441729-34441969)
chr2 (115-417)||(42005390-42005690)
chr2 (42-233)||(19093640-19093831)
chr2 (42-301)||(39788282-39788541)
chr2 (42-236)||(18514403-18514597)
chr2 (64-220)||(34441573-34441728)
chr2 (137-236)||(17244836-17244935)
chr2 (135-326)||(38249902-38250094)
chr2 (255-418)||(43446343-43446510)
chr2 (239-412)||(30844850-30845026)
chr2 (338-418)||(39788545-39788625)
chr2 (37-197)||(7565511-7565673)
chr2 (48-197)||(32652621-32652770)
chr2 (63-197)||(59395-59529)
chr2 (278-420)||(22963398-22963544)
chr2 (311-420)||(22997966-22998079)
chr2 (267-396)||(45414293-45414426)
chr2 (237-415)||(58025-58206)
chr2 (52-197)||(6357043-6357188)
chr2 (370-419)||(41465508-41465557)
chr2 (368-420)||(17245108-17245160)
chr2 (370-421)||(33551141-33551192)
chr2 (370-420)||(19313850-19313900)
chr2 (80-194)||(45411862-45411976)
chr2 (370-418)||(4264232-4264280)
chr2 (370-417)||(13711465-13711512)
chr2 (381-416)||(36641988-36642023)
chr2 (42-100)||(17244779-17244837)
chr2 (80-194)||(27355193-27355307)
chr2 (370-416)||(33660523-33660569)
chr2 (369-418)||(19093413-19093462)
chr2 (370-419)||(31861894-31861943)
chr2 (152-197)||(40912471-40912516)
chr2 (370-418)||(2325525-2325573)
chr2 (370-418)||(4166922-4166970)
chr2 (370-418)||(17054251-17054299)
chr2 (370-418)||(17071892-17071940)
chr2 (370-418)||(18494423-18494471)
chr2 (370-418)||(19424783-19424831)
chr2 (370-426)||(33902060-33902116)
chr2 (383-418)||(7007058-7007093)
chr2 (381-419)||(4763627-4763665)
chr2 (383-421)||(18514784-18514822)
chr2 (381-419)||(26357576-26357614)
chr2 (48-104)||(15651471-15651527)
chr2 (381-418)||(31570900-31570937)
chr2 (42-90)||(22997495-22997543)
chr2 (383-419)||(44913661-44913697)
[»] scaffold0200 (1 HSPs)
scaffold0200 (49-418)||(24496-24865)
[»] chr7 (40 HSPs)
chr7 (48-422)||(23402049-23402423)
chr7 (48-410)||(22954990-22955352)
chr7 (66-418)||(37853990-37854343)
chr7 (58-416)||(4618442-4618801)
chr7 (44-404)||(49002241-49002599)
chr7 (90-400)||(5781536-5781844)
chr7 (42-404)||(7742933-7743307)
chr7 (102-420)||(8133290-8133611)
chr7 (52-418)||(4902340-4902687)
chr7 (141-288)||(40382018-40382167)
chr7 (48-197)||(25470643-25470792)
chr7 (35-236)||(10674921-10675124)
chr7 (239-416)||(19786282-19786463)
chr7 (370-420)||(5657619-5657669)
chr7 (342-418)||(40381940-40382016)
chr7 (381-420)||(8861258-8861297)
chr7 (370-420)||(10359352-10359402)
chr7 (370-420)||(34362286-34362336)
chr7 (370-419)||(6546493-6546542)
chr7 (381-418)||(26524476-26524513)
chr7 (370-418)||(18797304-18797352)
chr7 (370-416)||(3953733-3953779)
chr7 (370-416)||(25691683-25691729)
chr7 (370-419)||(4582893-4582942)
chr7 (370-419)||(15612896-15612945)
chr7 (381-418)||(41765227-41765264)
chr7 (381-417)||(48928712-48928748)
chr7 (383-418)||(241034-241069)
chr7 (63-146)||(8759509-8759592)
chr7 (370-417)||(24211717-24211764)
chr7 (383-418)||(30055501-30055536)
chr7 (370-416)||(8299192-8299238)
chr7 (381-415)||(10675343-10675377)
chr7 (37-82)||(17842347-17842392)
chr7 (376-417)||(33688405-33688446)
chr7 (370-419)||(37109846-37109895)
chr7 (370-418)||(17842724-17842772)
chr7 (370-418)||(21991611-21991659)
chr7 (370-418)||(32432432-32432480)
chr7 (370-418)||(32821191-32821239)
[»] chr3 (60 HSPs)
chr3 (44-415)||(38392301-38392673)
chr3 (52-417)||(32180432-32180794)
chr3 (42-418)||(40640301-40640682)
chr3 (48-417)||(19606590-19606961)
chr3 (58-418)||(7568413-7568767)
chr3 (42-420)||(49359299-49359678)
chr3 (52-418)||(47930346-47930714)
chr3 (67-418)||(45879183-45879546)
chr3 (48-416)||(44880794-44881153)
chr3 (49-417)||(26000525-26000902)
chr3 (58-319)||(7758122-7758372)
chr3 (49-342)||(51878191-51878479)
chr3 (267-415)||(4556543-4556696)
chr3 (300-418)||(18272154-18272271)
chr3 (269-421)||(53811875-53812027)
chr3 (48-163)||(31706497-31706612)
chr3 (48-197)||(48154364-48154513)
chr3 (52-191)||(42664003-42664142)
chr3 (239-421)||(42204339-42204523)
chr3 (105-197)||(36689674-36689766)
chr3 (52-197)||(29923046-29923191)
chr3 (52-197)||(29972199-29972344)
chr3 (58-197)||(12121141-12121279)
chr3 (239-394)||(43485331-43485490)
chr3 (381-426)||(4015443-4015488)
chr3 (52-197)||(5125442-5125586)
chr3 (67-197)||(47871210-47871340)
chr3 (369-418)||(7327619-7327668)
chr3 (52-197)||(11019700-11019844)
chr3 (370-427)||(21193588-21193645)
chr3 (370-419)||(51213118-51213167)
chr3 (370-418)||(35844317-35844365)
chr3 (383-418)||(40552409-40552444)
chr3 (370-420)||(1089720-1089769)
chr3 (370-416)||(46297899-46297945)
chr3 (381-418)||(11466815-11466852)
chr3 (381-418)||(22450959-22450996)
chr3 (370-415)||(32373466-32373511)
chr3 (34-82)||(13498686-13498734)
chr3 (239-319)||(47870291-47870370)
chr3 (370-418)||(48354932-48354980)
chr3 (370-418)||(52041060-52041108)
chr3 (301-364)||(5124726-5124789)
chr3 (370-417)||(11835743-11835790)
chr3 (65-119)||(435308-435362)
chr3 (48-86)||(18271880-18271918)
chr3 (185-235)||(31706781-31706831)
chr3 (383-417)||(43348281-43348315)
chr3 (370-416)||(53818509-53818555)
chr3 (75-180)||(4556987-4557092)
chr3 (370-415)||(23165838-23165883)
chr3 (390-419)||(33698182-33698211)
chr3 (381-418)||(39282644-39282681)
chr3 (383-416)||(43976035-43976068)
chr3 (37-82)||(46297524-46297569)
chr3 (381-418)||(53175714-53175751)
chr3 (381-418)||(55343432-55343469)
chr3 (370-418)||(26941397-26941445)
chr3 (388-420)||(27480534-27480566)
chr3 (383-419)||(37157698-37157734)
[»] chr4 (58 HSPs)
chr4 (42-416)||(2266527-2266902)
chr4 (49-415)||(17612338-17612704)
chr4 (42-338)||(2570558-2570855)
chr4 (52-416)||(9743590-9743954)
chr4 (185-418)||(54995613-54995847)
chr4 (95-288)||(2708003-2708196)
chr4 (195-375)||(1012339-1012521)
chr4 (87-236)||(49878858-49879006)
chr4 (278-416)||(20097395-20097537)
chr4 (300-418)||(2704512-2704628)
chr4 (239-420)||(33036071-33036255)
chr4 (278-417)||(51204580-51204723)
chr4 (48-197)||(5914947-5915096)
chr4 (37-107)||(2708202-2708272)
chr4 (52-197)||(14246414-14246559)
chr4 (370-420)||(55241267-55241317)
chr4 (63-146)||(22721943-22722026)
chr4 (278-345)||(51959922-51959989)
chr4 (370-418)||(38812260-38812308)
chr4 (381-420)||(28003160-28003199)
chr4 (37-104)||(28292361-28292428)
chr4 (370-421)||(38811810-38811861)
chr4 (370-416)||(27396618-27396664)
chr4 (347-421)||(33255496-33255570)
chr4 (42-91)||(51960017-51960066)
chr4 (132-193)||(54995007-54995068)
chr4 (370-418)||(7152269-7152317)
chr4 (239-363)||(22756801-22756924)
chr4 (370-418)||(35021198-35021246)
chr4 (267-350)||(17513043-17513126)
chr4 (267-419)||(28293130-28293286)
chr4 (370-420)||(39397916-39397966)
chr4 (370-416)||(47253751-47253797)
chr4 (370-419)||(7703516-7703565)
chr4 (239-352)||(22729777-22729889)
chr4 (381-422)||(34948271-34948312)
chr4 (381-418)||(38011854-38011891)
chr4 (383-420)||(49375964-49376001)
chr4 (370-418)||(17272011-17272059)
chr4 (386-418)||(25184113-25184145)
chr4 (370-418)||(25701220-25701268)
chr4 (141-197)||(28292430-28292486)
chr4 (370-418)||(29584361-29584409)
chr4 (370-418)||(32912743-32912791)
chr4 (370-418)||(34361654-34361702)
chr4 (370-418)||(55478058-55478106)
chr4 (370-417)||(4597994-4598041)
chr4 (49-104)||(9409539-9409594)
chr4 (383-421)||(19440824-19440863)
chr4 (383-418)||(37287733-37287768)
chr4 (383-418)||(37663915-37663950)
chr4 (239-346)||(47236934-47237041)
chr4 (370-416)||(52516599-52516645)
chr4 (370-420)||(53337576-53337626)
chr4 (381-418)||(4205116-4205153)
chr4 (370-418)||(4396326-4396374)
chr4 (370-418)||(9139247-9139295)
chr4 (370-418)||(47073657-47073705)
[»] chr8 (42 HSPs)
chr8 (52-427)||(4108596-4108969)
chr8 (44-362)||(3038462-3038780)
chr8 (42-418)||(7290720-7291096)
chr8 (58-421)||(23176474-23176814)
chr8 (48-416)||(18756344-18756704)
chr8 (151-419)||(6267285-6267550)
chr8 (52-237)||(28220714-28220898)
chr8 (63-236)||(34685958-34686131)
chr8 (37-236)||(30650901-30651108)
chr8 (239-416)||(35735850-35736030)
chr8 (239-418)||(1879095-1879278)
chr8 (267-418)||(34463416-34463567)
chr8 (370-417)||(35459841-35459888)
chr8 (239-418)||(1835254-1835437)
chr8 (52-197)||(1872594-1872738)
chr8 (370-419)||(5300089-5300138)
chr8 (381-418)||(7998362-7998399)
chr8 (370-419)||(13307621-13307670)
chr8 (381-418)||(39099263-39099300)
chr8 (370-418)||(16447018-16447066)
chr8 (368-415)||(5018013-5018060)
chr8 (355-418)||(28220940-28221003)
chr8 (370-416)||(7891091-7891137)
chr8 (370-419)||(10555345-10555394)
chr8 (370-419)||(15009240-15009289)
chr8 (381-418)||(34894966-34895003)
chr8 (370-418)||(1150248-1150296)
chr8 (370-418)||(1204926-1204974)
chr8 (370-418)||(27082981-27083029)
chr8 (381-421)||(33906220-33906260)
chr8 (370-418)||(38643977-38644025)
chr8 (386-418)||(43643754-43643786)
chr8 (381-416)||(6446717-6446752)
chr8 (370-421)||(23854574-23854625)
chr8 (381-419)||(1954108-1954146)
chr8 (370-420)||(6098661-6098711)
chr8 (42-104)||(6446183-6446245)
chr8 (381-419)||(33197890-33197928)
chr8 (370-412)||(37970662-37970704)
chr8 (381-418)||(16222862-16222899)
chr8 (381-418)||(36695120-36695157)
chr8 (370-427)||(41362508-41362565)
[»] chr1 (47 HSPs)
chr1 (63-418)||(13876611-13876967)
chr1 (52-402)||(16127536-16127883)
chr1 (78-419)||(27118329-27118671)
chr1 (67-419)||(15964101-15964452)
chr1 (75-381)||(10758004-10758311)
chr1 (52-398)||(25943218-25943563)
chr1 (48-349)||(31804772-31805063)
chr1 (219-418)||(16132475-16132675)
chr1 (42-236)||(47554938-47555132)
chr1 (48-214)||(16135528-16135694)
chr1 (58-236)||(3120549-3120727)
chr1 (59-222)||(3120162-3120325)
chr1 (53-197)||(422205-422349)
chr1 (42-177)||(5500596-5500730)
chr1 (368-419)||(43579241-43579292)
chr1 (48-148)||(43579518-43579618)
chr1 (370-420)||(3309142-3309192)
chr1 (52-197)||(28012925-28013070)
chr1 (370-419)||(38823209-38823258)
chr1 (370-418)||(1547283-1547331)
chr1 (182-238)||(43579462-43579518)
chr1 (373-419)||(31621688-31621734)
chr1 (308-369)||(17695951-17696012)
chr1 (370-418)||(16415641-16415689)
chr1 (370-421)||(15752022-15752073)
chr1 (111-162)||(17695202-17695253)
chr1 (368-415)||(42663783-42663830)
chr1 (370-420)||(27227609-27227659)
chr1 (381-418)||(2959744-2959781)
chr1 (381-418)||(4150498-4150535)
chr1 (369-418)||(10182139-10182188)
chr1 (300-361)||(28012123-28012184)
chr1 (383-420)||(47279157-47279194)
chr1 (370-418)||(21289661-21289709)
chr1 (370-418)||(22170750-22170798)
chr1 (370-418)||(39393379-39393427)
chr1 (368-416)||(47554718-47554766)
chr1 (373-416)||(33725735-33725778)
chr1 (309-412)||(34491444-34491551)
chr1 (383-421)||(42721032-42721070)
chr1 (52-121)||(7843083-7843152)
chr1 (370-419)||(47682625-47682674)
chr1 (370-418)||(11742482-11742530)
chr1 (381-417)||(14758038-14758074)
chr1 (370-418)||(18422647-18422695)
chr1 (370-418)||(32267030-32267078)
chr1 (370-418)||(37619028-37619076)
[»] chr6 (27 HSPs)
chr6 (37-418)||(11083824-11084200)
chr6 (42-418)||(19631749-19632126)
chr6 (42-418)||(26301593-26301971)
chr6 (48-342)||(34993907-34994203)
chr6 (42-251)||(4104183-4104393)
chr6 (48-238)||(6613670-6613860)
chr6 (166-318)||(30341124-30341277)
chr6 (48-197)||(4487733-4487882)
chr6 (48-197)||(25441709-25441858)
chr6 (63-197)||(18306573-18306707)
chr6 (58-174)||(30341461-30341577)
chr6 (338-416)||(30338478-30338556)
chr6 (370-418)||(8513233-8513281)
chr6 (370-420)||(24662190-24662240)
chr6 (370-416)||(30353494-30353540)
chr6 (370-418)||(3880075-3880123)
chr6 (370-418)||(4318959-4319007)
chr6 (381-417)||(20768087-20768123)
chr6 (382-421)||(7235182-7235221)
chr6 (370-416)||(6088910-6088956)
chr6 (383-417)||(3005406-3005440)
chr6 (48-104)||(3148828-3148885)
chr6 (308-393)||(4102864-4102949)
chr6 (63-104)||(24661704-24661744)
chr6 (370-418)||(5627391-5627439)
chr6 (368-416)||(6614034-6614082)
chr6 (370-418)||(18498433-18498481)
[»] scaffold0050 (1 HSPs)
scaffold0050 (52-363)||(5645-5955)
[»] scaffold0312 (1 HSPs)
scaffold0312 (53-197)||(8223-8367)
[»] scaffold0262 (3 HSPs)
scaffold0262 (239-317)||(12035-12113)
scaffold0262 (370-420)||(12138-12188)
scaffold0262 (120-193)||(11422-11495)
[»] scaffold0003 (1 HSPs)
scaffold0003 (83-180)||(107966-108062)
[»] scaffold0009 (2 HSPs)
scaffold0009 (370-418)||(100821-100869)
scaffold0009 (370-418)||(42348-42396)
[»] scaffold0002 (1 HSPs)
scaffold0002 (370-418)||(134-182)
[»] scaffold0001 (1 HSPs)
scaffold0001 (65-197)||(65992-66125)
[»] scaffold0318 (1 HSPs)
scaffold0318 (381-416)||(11908-11944)


Alignment Details
Target: chr5 (Bit Score: 313; Significance: 1e-176; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 17 - 448
Target Start/End: Complemental strand, 10237814 - 10237386
Alignment:
Q  17 cattaaccaatactaactgagagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgcca 116  Q
    |||||||||||||  |||| | || |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||  ||||||| ||    
T  10237814 cattaaccaatacatactgggggcttctacagtgcagtcaaaagactgacttttttagaaaagttattttgtttagccaatagtataac-gtcgatgtca 10237716  T
Q  117 tgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagt 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10237715 tgtcagctaatgtcatgttggtagaccactctagaactaaactttaccttattacaaattagtcatcgtacaaaatattaagggaaatttcaatcttagt 10237616  T
Q  217 gcacaattgagaatctatgtttattttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacacc 316  Q
    | |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10237615 gtacaaatgagaatctatgtttattttgatttaatctgggacacaattggaataagtaaatatataatgaaataccttatggacaaatgcgcaatacacc 10237516  T
Q  317 atataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  10237515 atataatctgacgtgaaatgaattaaatacacaaatgctcaatgattgaccatttaacttcactagaaaagtcattttcatgacttcacaatagaatttt 10237416  T
Q  417 ccatacttttactaattataacgaatattctt 448  Q
    | ||||  |||||||||| |||||||||||||    
T  10237415 ctatac--ttactaattacaacgaatattctt 10237386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 48 - 418
Target Start/End: Complemental strand, 22616861 - 22616494
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||||| |||| ||| |||||| ||||||||||||||||||| ||||||||||| ||  |    ||||||||||| |||| || |||||||||||||    
T  22616861 gtgcagtcagaaaactgatttttttggaaaagttattttgtttagccaatagtataactgcagt---catgtcagctagtgtcctgctggtggaccactc 22616765  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgat 246  Q
    || ||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  22616764 taaaactaaactttaccttattacaaatcagtcctcatacaaaatattaaggggaatttcaattttagtgcacaaatgagaatctatgtttaattttgat 22616665  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    ||||||||||||||| ||| |||||||||| ||||||||||| || |||||| ||||||  |||||||||||||||| |||||||| ||| |||||||||    
T  22616664 ttaatcagggacacaattgcaataagtaaagatataatgacacaccttatgggcaaatgtccaatacaccatataatatgacgtgacatggattaaatac 22616565  T
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |  ||||||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||||||    
T  22616564 a-taatgctcaatgattggccatttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 22616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 52 - 418
Target Start/End: Original strand, 36055556 - 36055922
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||||||| | |||||||| |||||||||||||||||||  |||||||||| || ||||| || |||| ||| |||| || |||||| |||||||| |    
T  36055556 agtcaaaaaactaacttttttggaaaagttattttgtttagctaatagtataactggcgatgtcaagtcaactagtgtcgtgctggtggcccactctaaa 36055655  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaa 250  Q
    |||||||||||| ||||||||||||| |  || ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  36055656 actaaactttaccttattacaaatcaattctcatacaagatattaagggaa-tttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaa 36055754  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    || |||||||| ||| |||||||||| ||||||||||| || |||||  |||||| |||||||||||| |||||||| | || ||||||||||| |||||    
T  36055755 tcggggacacaattgtaataagtaaagatataatgacacaccttatgagcaaatgtgcaatacaccatgtaatctgatgcgacatgaattaaattcacaa 36055854  T
Q  351 atgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||    
T  36055855 atgctcaatgattgaccatttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcc 36055922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 81 - 416
Target Start/End: Original strand, 41417289 - 41417625
Alignment:
Q  81 tattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtc 180  Q
    |||||||||||   |||||||||| |||||||| ||||||||||  ||||||| ||||||| || | || ||||||| ||||| ||||||||||||||||    
T  41417289 tattttgtttaactaatagtataactgtcgatgtcatgtcagctggtgtcatgctggtggatcattttaaaactaaattttaccttattacaaatcagtc 41417388  T
Q  181 atcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagtaaatat 279  Q
    ||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||| |||||||||| ||    
T  41417389 atcatacaaaataataaggggaatttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaatctgggacacaattgcaataagtaaagat 41417488  T
Q  280 ataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttac 379  Q
    | ||||||| || |||||  |||||  |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||| ||    
T  41417489 aaaatgacacaccttatgagcaaatttgcaatacaccatataatctgacatgatataaattaaatacacaaatgttcaatgattaaccatttaacttcac 41417588  T
Q  380 tagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| ||||||| | || ||||||||| ||||||    
T  41417589 tagaaaaatcattcttacgatttcaccatataatttt 41417625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 58 - 376
Target Start/End: Complemental strand, 31878745 - 31878425
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||||||||||||| | |||||||| ||||||||  ||||||||||| |||||||| | || |||||| |||| |||||||||||||||||| || ||||    
T  31878745 aaaattgactttttaaaaaaagttagtttgtttaaccaatagtataactgtcgatgtcgtgccagctagtgtcctgttggtggaccactctaaaattaaa 31878646  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaa-tattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagg 255  Q
    |||||| |||||||| ||||||   | ||||||| |||||||   ||||||||||||||||||||| |  ||||||||||||| ||||||||||||||||    
T  31878645 ctttaccttattacagatcagttcccatacaaaaatattaagaagaatttcaatcttagtgcacaaataggaatctatgtttaattttgatttaatcagg 31878546  T
Q  256 gacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgct 355  Q
    |||||| |||  ||||||||| ||||||||||| || |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31878545 gacacaattgtcataagtaaagatataatgacacaccttatagacaaatgtgcaatacaccatataatctgacgtgacatgaattaaatacacaaatgct 31878446  T
Q  356 caatgattgaccatttaactt 376  Q
     |||||||||| |||||||||    
T  31878445 taatgattgacaatttaactt 31878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 42 - 416
Target Start/End: Complemental strand, 33163890 - 33163515
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||| ||| ||||  ||||||||| ||||| |||||| |||||||||||||||||| || ||||| ||||||||||| ||||||| || ||||    
T  33163890 tctacggtgcaatcagaaaaccgacttttttggaaaaattattt-gtttagtcaatagtataactgccgatgtcatgtcagctagtgtcatgctg-tgga 33163793  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-at 240  Q
    ||||| || ||||||||||||| |||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||  ||||||| ||||||| ||    
T  33163792 ccactttaaaactaaactttaccttattacaaatcagtcttcatacaaaatattaaggaaaatttcaatcttaatgcacacatgagaatttatgtttaat 33163693  T
Q  241 tttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacacc--atataatctgacgtgatatgaa 338  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||| || || ||||||| ||||| ||||||||||  ||||||||||| |||  ||  |    
T  33163692 tttgatttaatcagggacacaattgcaataagtaaagatataatggcacaccttatggataaatgtgcaatacaccatatataatctgatgtggcataga 33163593  T
Q  339 ttaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||| ||||||||| | |||||||   |||||||||  ||   |||| ||||| |||||||||||||||||||||||    
T  33163592 ttaaacacacaaatgtttaatgattagacatttaactccaccgaaaaaatcattttcatgacttcaccatagaatttt 33163515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 48 - 417
Target Start/End: Complemental strand, 21321121 - 21320752
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||| || |||| ||||||||||  |||||||||||||||||| ||||||||||| || ||||  |||| |||||| |||  || ||||||| || ||    
T  21321121 gtgcagccagaaaactgacttttttgaaaaagttattttgtttagccaatagtataactgacgatttcatgccagctagtgttctgctggtggatca-tc 21321023  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgat 246  Q
    || ||||||||||||| ||  ||||||||| || || |||||||||||||| ||||||||||| ||||||| ||| ||||||||||||||| ||||||||    
T  21321022 taaaactaaactttaccttcctacaaatcaatcctcatacaaaatattaagcgaaatttcaattttagtgctcaaatgagaatctatgtttaattttgat 21320923  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    |||||||| |||||| ||| |||||||||| ||||||||| | |  ||||   |||||  ||||||||||||||||||||| |||  || | ||||||||    
T  21320922 ttaatcagagacacaattgtaataagtaaagatataatgatacatcttatatgcaaatatgcaatacaccatataatctgatgtggcattagttaaatac 21320823  T
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    || |||||||||||||||| |||||||||| |  | |||||||||| | || |||||||||||||||||||    
T  21320822 acgaatgctcaatgattgatcatttaacttcatcaaaaaagtcatttttattacttcaccatagaattttc 21320752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 42 - 338
Target Start/End: Complemental strand, 27579403 - 27579108
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| || |||||| |||| | |||||||| ||||||||||| | ||||| ||||| ||||| |||||||| ||||| ||||| |||  |  |||||||    
T  27579403 tctacggtacagtcagaaaactaacttttttggaaaagttattatctttagacaataatataactgtcgatgtcatgttagctagtgttctactggtgga 27579304  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-t 240  Q
    |||||||| ||||||||||||| ||||||||||||| || |   ||||||||||||||  ||||||||||||||||||||| ||  ||  |||||||| |    
T  27579303 ccactctaaaactaaactttaccttattacaaatcattccttaaacaaaatattaaggagaatttcaatcttagtgcacaaatggaaa--tatgtttact 27579206  T
Q  241 tttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||| || |||||| ||| ||||| |||| ||||||||||  || |||| | |||||  |||||||||||||||||||||||||| |||||    
T  27579205 tttgatttaattagagacacaattgcaataaataaagatataatgacgcactttataggcaaatatgcaatacaccatataatctgacgtgacatgaa 27579108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 239 - 365
Target Start/End: Complemental strand, 25653763 - 25653637
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||||||| | ||||| |||||||||| ||||||||||| || |||||  |||||| ||||||||||||| ||||||||||||||||||    
T  25653763 attttgatttaatcagggaaatagttgcaataagtaaagatataatgacacaccttatgagcaaatgtgcaatacaccatacaatctgacgtgatatgaa 25653664  T
Q  339 ttaaatacacaaatgctcaatgattga 365  Q
    |||||||||||||| ||||||||||||    
T  25653663 ttaaatacacaaatactcaatgattga 25653637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 12080422 - 12080558
Alignment:
Q  59 aaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaac 158  Q
    ||||||||||||||  |||||||||||||||||||| |||  |||||||| |||| ||||||||||| |||| || |||||||||||| ||  |||||||    
T  12080422 aaattgacttttttgaaaaagttattttgtttagtcgataacataattgttgatgtcatgtcagctagtgtcctgctggtggaccactttaagactaaac 12080521  T
Q  159 tttactttattacaaatcagtcatcgtacaaaatatt 195  Q
    ||||| |||||||||||||||| || |||||||||||    
T  12080522 tttaccttattacaaatcagtcctcatacaaaatatt 12080558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 25654704 - 25654568
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaacttta 162  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||  |||||| ||| |||  | ||| |||||||||||| ||||||||||||    
T  25654704 tgacttttttagaaaagttattttgtttaaccaatagtataattgttgatgt-atgtcaactagtgtattattgatggaccactctaaaactaaacttta 25654606  T
Q  163 ctttattacaaatcagtcatcgtacaaaatattaaggg 200  Q
    | |||||||||||||||| | ||||||| |||||||||    
T  25654605 ccttattacaaatcagtctttgtacaaactattaaggg 25654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 13380678 - 13380498
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||||||| ||| ||| ||||| |||| |||||||||||||  ||||||  ||||| |||||||||||| || | |||||| |||   |    
T  13380678 attttgatttaatcagggatacaattgcaataaataaagatataatgacatattttatgggtaaatgtgcaatacaccatgtagtatgacgttataaaga 13380579  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    |||||||||||||| |||| | | ||| |||    ||||||| |||||||||||||||||||||||||||||||| |||||    
T  13380578 ttaaatacacaaatactcattaagtgatcatagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 8762873 - 8763022
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||  |||||| ||| ||||  ||||||||||||| | |||| |  || ||||||||      
T  8762873 gtgcagtcaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagcgagtgtctttgtgatggaccaccg 8762972  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| |||||||||||||||||||||| ||||||||||||||||    
T  8762973 taacactaaattttactttattacaaatcagtcctcgtacaaaatattaa 8763022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 239 - 419
Target Start/End: Complemental strand, 26411476 - 26411292
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||| ||||| ||| ||| |||||||||||||||| || |||||  ||||  ||||||  |||||||||||||||| |||||||| ||| |    
T  26411476 attttgatttaattagggatacaattgcaataagtaaatatatagtggcatactgtatgagcaaatgtacaatacaccatataatttgacgtgacatgta 26411377  T
Q  339 ttaaatacacaaatgctcaatgattgaccatt----taactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||||| ||||  ||||||||||  ||||    | |||| || | |||| ||||||| ||||||||||||||||||||||||    
T  26411376 ttaaatacataaatattcaatgattggtcattctaatgacttcaccaaaaaaatcattctaatgacttcaccatagaattttcca 26411292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 33752393 - 33752534
Alignment:
Q  58 aaaattgactt-ttttagaaaa-gttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaacta 155  Q
    ||||||||||| |||||||||| |||| ||||||||||||||| |||||||||  ||| ||||| ||||| |||||||||||| ||| ||||||  ||||    
T  33752393 aaaattgacttattttagaaaaagttactttgtttagtcaataatataattgttaatgacatgtgagctactgtcatgttggtagactactctaagacta 33752492  T
Q  156 aactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||||| |||||| |||||| || || |||||||||||||    
T  33752493 aactttaccttattaaaaatcaatcctcatacaaaatattaa 33752534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 13381251 - 13381123
Alignment:
Q  69 ttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttat 168  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||| |||  || ||||||||| |||||   ||||||||||| ||||    
T  13381251 ttttagaaaaattattttgtttagtcaatagtataactgttgatgtcatgtcagctagtgttctgctggtggacctctctaaggctaaactttaccttat 13381152  T
Q  169 tacaaatcagtcatcgtacaaaatattaa 197  Q
    || |||||| || || |||||||||||||    
T  13381151 tataaatcaatcctcatacaaaatattaa 13381123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 245 - 421
Target Start/End: Original strand, 33752923 - 33753096
Alignment:
Q  245 atttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaat 344  Q
    ||||||||||||||||| | | |||||||||| ||| ||| ||| || || |||||||||| |||||| ||| |||||||||| |||| ||  |||||||    
T  33752923 atttaatcagggacacaatggcaataagtaaagatacaataacacaccttgtggacaaatgtgcaataaaccctataatctgaagtgacattgattaaat 33753022  T
Q  345 acacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||| | |||||||| | ||   | || || |||||| |||||||||||| ||||| |||||||||||||||    
T  33753023 acacaaatggtaaatgattggctat---atttcaccagaaaaatcattctcatgatttcactatagaattttccata 33753096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 29766498 - 29766667
Alignment:
Q  67 ttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttacttt 166  Q
    |||||| || |||||||||| ||||  ||||||||||| |||  ||||||||||| ||| |||  |  || ||||||||||||  |||||||||||| ||    
T  29766498 ttttttggataagttattttatttatccaatagtataactgttaatgccatgtcaactagtgttctactgatggaccactctaagactaaactttacctt 29766597  T
Q  167 attacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    ||||||||| |||  || |||||||||||||||| ||||| ||||||| ||||||| || ||||| ||||    
T  29766598 attacaaattagttctcatacaaaatattaaggggaatttaaatcttaatgcacaaatgggaatccatgt 29766667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 239 - 350
Target Start/End: Complemental strand, 10053402 - 10053291
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    |||||||||||||||||||| || ||| |||||||||| ||||||||||| || |||||  |||||| ||||||||| |||||||| ||||| | ||| |    
T  10053402 attttgatttaatcagggactcaattgcaataagtaaagatataatgacacaccttatgagcaaatgtgcaatacacgatataatccgacgtaacatgga 10053303  T
Q  339 ttaaatacacaa 350  Q
    ||||||||||||    
T  10053302 ttaaatacacaa 10053291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 33848018 - 33848173
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| |||| |||| |||||||||| ||||  |||||||| |||||||| |||||| |||||||||  ||| ||||| ||||| ||||||| || | ||    
T  33848018 tctacggtgcggtcagaaaattgactattttgaaaaagttactttgtttaatcaataatataattgttaatgacatgtaagctagtgtcatgctgataga 33848117  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    | ||||||  |||||||||||| |||||| |||||| || || |||||||||||||    
T  33848118 ctactctaagactaaactttaccttattaaaaatcaatcctcatacaaaatattaa 33848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 13888470 - 13888329
Alignment:
Q  56 aaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaacta 155  Q
    |||||| ||||||||||| |||||| ||||| ||||  |||| | ||| ||||  ||||||||||||||| |||| |  || |||||| || ||  ||||    
T  13888470 aaaaaaatgacttttttaaaaaagtcattttatttaaccaattgcatagttgtttatgccatgtcagctagtgtctttgtgatggacccctgtaacacta 13888371  T
Q  156 aactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    || |||||||||||| ||||||||| || |||||||||||||    
T  13888370 aattttactttattataaatcagtcctcatacaaaatattaa 13888329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 364
Target Start/End: Original strand, 33848556 - 33848681
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    |||||||||||||||| |||||| |   ||||| |||| ||| ||| ||| ||||| |||||||||| |||||| | | |||||||||| |||| ||  |    
T  33848556 attttgatttaatcagagacacaatgacaataaataaagatacaataacacacattgtggacaaatgtgcaataaatcctataatctgaagtgacattga 33848655  T
Q  339 ttaaatacacaaatgctcaatgattg 364  Q
    ||||||||||||||||| ||||||||    
T  33848656 ttaaatacacaaatgctaaatgattg 33848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 12164016 - 12164136
Alignment:
Q  77 aagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatc 176  Q
    |||||| |||||||||||||||| |||||  | |||| ||||||||||| |||  ||||||||||||| | || | |||||||||  |||||||||||||    
T  12164016 aagttaatttgtttagtcaataggataatcattgatgtcatgtcagctagtgtattgttggtggaccattgtaaatctaaacttttttttattacaaatc 12164115  T
Q  177 agtcatcgtacaaaatattaa 197  Q
    |||| || || |||| |||||    
T  12164116 agtcctcataaaaaacattaa 12164136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 39572867 - 39572819
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39572867 ttaacttaactagaaaagtcattctcatgacttcaccatagaattttcc 39572819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 25501053 - 25501099
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  25501053 ttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 3014811 - 3014683
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||| ||| ||| ||||||| |||||| ||||||||||  |||||| ||| ||||  |||||||||||| || |||| |  || |||||||||     
T  3014811 gtgcagtcaacaaaatgattttttta-aaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagttagtgtctttgtgatggaccactg 3014713  T
Q  148 tagaactaaactttactttattacaaatca 177  Q
    ||  |||||| |||||||||||||||||||    
T  3014712 taacactaaattttactttattacaaatca 3014683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 8742014 - 8742062
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  8742014 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 8742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 197
Target Start/End: Complemental strand, 10053952 - 10053820
Alignment:
Q  59 aaattgacttttttagaaaagttat-tttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    ||||||||||||||  ||||||||| ||||||||  ||||||||||| ||| |||| ||||||||||| |||         |||||||||||  ||||||    
T  10053952 aaattgacttttttgaaaaagttatgtttgtttacccaatagtataactgttgatgtcatgtcagctagtgt---------ggaccactctacgactaaa 10053862  T
Q  158 ctttactttattac--aaatcagtcatcgtacaaaatattaa 197  Q
     |||||||||||||  ||||||||| || |||||||||||||    
T  10053861 ttttactttattacaaaaatcagtcctcatacaaaatattaa 10053820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 19119907 - 19119859
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||    
T  19119907 ttaacttcaccacaaaagtcattctcatgacttcaccatagaattttcc 19119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 420
Target Start/End: Original strand, 14409464 - 14409503
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  14409464 agaaaaatcattctcatgacttcaccatagaattttccat 14409503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 15724538 - 15724487
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||||||||    
T  15724538 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttccata 15724487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 12081136 - 12081222
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatct 325  Q
    ||||||||||||||||||||  | ||| |||||||||| |||||| |||| || ||||   |||||| | |||||||||||||||||    
T  12081136 attttgatttaatcagggacttaattgcaataagtaaagatataaggacacaccttataagcaaatgtgtaatacaccatataatct 12081222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 7693278 - 7693229
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||||||||| | ||||||||||||||||||||||||    
T  7693278 ttaacttcaccagaaaagtcattttaatgacttcaccatagaattttcca 7693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 12910399 - 12910350
Alignment:
Q  369 tttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| || | |||||||||| |||||||||||||||||||||||||    
T  12910399 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 12910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 21266098 - 21266016
Alignment:
Q  342 aatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||| |||||||||||||||||| ||    |||| ||||| |||||||||||| |||||| ||||||| |||| |||||||    
T  21266098 aatacataaatgctcaatgattgactatagggttaattttaccagaaaagtcattatcatgagttcaccagagaactttccat 21266016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 26412197 - 26412052
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| |||||| |||  |||||| ||||| ||||| |||||| || ||||| |||| ||||||||||||| || |  || ||||||| | ||      
T  26412197 agtcaagaaaatgacttatttgaaaaagtcattttatttagccaatagcatgattgttgatgtcatgtcagctaatatctttgtgatggaccattgtaag 26412098  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| | ||  ||||| |||||||||| ||||| ||||||||||    
T  26412097 actaaattatatcttattgcaaatcagtcctcgtataaaatattaa 26412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 8466793 - 8466745
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||||||||||| ||| |||||||||||||    
T  8466793 ttaacttcaccagaaaagtcattctcatgacctcatcatagaattttcc 8466745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 16004503 - 16004555
Alignment:
Q  370 ttaactttactagaaaagtca-ttctcatgacttcaccatagaattttccata 421  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||||||||||    
T  16004503 ttaacttcaccagaaaagtcaattctcatgactttaccatagaattttccata 16004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 27330354 - 27330306
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||| || |||||||||||||||||||||    
T  27330354 ttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcc 27330306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 35826610 - 35826658
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||| |||||||||||||||||||||||||    
T  35826610 ttaacttcacaaaaaaagtcattatcatgacttcaccatagaattttcc 35826658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 13887420 - 13887374
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatg 285  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  13887420 attttgatttaatcaaggacacaattgcaataagtaaaaatataatg 13887374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 22019681 - 22019631
Alignment:
Q  369 tttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||||| || |||||||||||||| || |||||||||||||| ||||||    
T  22019681 tttaacttcaccagaaaagtcattctaataacttcaccatagaaatttcca 22019631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 40133433 - 40133383
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || | |||||||||| || ||||||||||||||||||||||||    
T  40133433 ttaacttcaccacaaaagtcattttcgtgacttcaccatagaattttccat 40133383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 13956483 - 13956520
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  13956483 agaaaagtcattttcatgacttcaccgtagaattttcc 13956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 23116362 - 23116399
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  23116362 aaaagtcattttcatgacgtcaccatagaattttccat 23116399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 26317811 - 26317860
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||||| ||||||||||| ||||||||||||||    
T  26317811 ttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcca 26317860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 36866810 - 36866761
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||| ||||| || |||||||||||||||||||||||    
T  36866810 ttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcca 36866761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 36867185 - 36867140
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagtta 82  Q
    |||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  36867185 gagcttctacggtgcagtcagaaaattgacttttttaaaaaagtta 36867140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 2888469 - 2888505
Alignment:
Q  386 agtcattctcatgacttcaccatagaattttccatac 422  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  2888469 agtcattttcataacttcaccatagaattttccatac 2888505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 5112440 - 5112488
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||| |||||||||||||||| ||||||||    
T  5112440 ttaacttcaccaaaaaagtcattttcatgacttcaccataaaattttcc 5112488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 12164916 - 12164964
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||  | |||||||||||||||||||||||| || ||||||||    
T  12164916 ttaactttagcaaaaaagtcattctcatgacttcaccgtaaaattttcc 12164964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 22974209 - 22974257
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| |||||||||| ||||||||||||||||||||    
T  22974209 ttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcc 22974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 36860471 - 36860423
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||| ||||| || ||||||||||||||||||||||    
T  36860471 ttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 36860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 36860842 - 36860802
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagtta 82  Q
    ||||| ||||||||| |||||||||||||||| ||||||||    
T  36860842 tctacggtgcagtcagaaaattgacttttttaaaaaagtta 36860802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 409
Target Start/End: Original strand, 43308778 - 43308818
Alignment:
Q  370 ttaactttactagaaaa-gtcattctcatgacttcaccata 409  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  43308778 ttaactttactaaaaaaagtcattctcatgacttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 309; Significance: 1e-174; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 42 - 418
Target Start/End: Complemental strand, 6178151 - 6177775
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||    
T  6178151 tctacggtgcagtcaaaaaactgacttttttagaaaagttattttgtttagccaatagtataactgccgatgtcatgtcagctagtgtcatgttggtgga 6178052  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttatt 241  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6178051 ccactctagaactaaactttaccttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaaatgagaatctatgtttatt 6177952  T
Q  242 ttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaatta 341  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  6177951 ttgatttaatcagggacacaattggaataagtaaatatataatgacataccttatgggcaaatgcgcaatacaccatataatctgacgtgacatgaatta 6177852  T
Q  342 aatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||    
T  6177851 aatacacaaatgctcaatgattgaccatttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcc 6177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 42 - 416
Target Start/End: Complemental strand, 41644250 - 41643874
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||| |||||| | ||||||||  ||||  |||||||||||| ||||| ||||||||| |||| ||||||||||| ||||||| |||||||    
T  41644250 tctacggtgcagtaaaaaaacttacttttttgaaaaatatattttgtttagccaataatataattgttgatgtcatgtcagctagtgtcatgctggtgga 41644151  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaa-tattaagggaaatttcaatcttagtgcacaattgagaatctatgttta- 239  Q
    |||||||| ||||||||| ||| |||||||||||||||| || ||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||     
T  41644150 ccactctaaaactaaactctaccttattacaaatcagtcctcatacaaaaatattaaggggaatttcaatcttagtgcacaaatgagaaactatgtttaa 41644051  T
Q  240 ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaat 339  Q
    |||||||||||||||||| ||| ||| |||||||||| ||||||||||| || |||||  |||||| |||||||||||||||||||||||||| ||||||    
T  41644050 ttttgatttaatcagggatacaattgcaataagtaaagatataatgacacaccttatgatcaaatgtgcaatacaccatataatctgacgtgacatgaat 41643951  T
Q  340 taaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||    
T  41643950 taaatacacaaatgctcaatgattgaccatttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttt 41643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 49 - 418
Target Start/End: Complemental strand, 19073722 - 19073357
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||| ||| |||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||||  | |||| || ||||| |||||| |    
T  19073722 tgcaatcagaaaattgacttttttgtaaaagttattttatttagtcaatagtataattgttgatgtcatgtcagtcagtgtcctgctggtgaaccacttt 19073623  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaat-tgagaatctatgtttat-tttgat 246  Q
    | ||||||| ||||| |||||||||||||||| ||||| |||||||||| |||| |||||      ||||| ||  ||||||||||||||||  ||||||    
T  19073622 aaaactaaattttaccttattacaaatcagtcctcgtataaaatattaaaggaa-tttca------gtgcaaaaaatgagaatctatgtttaactttgat 19073530  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    ||||||||||||||| ||  |||||||||||||||||||||| || |||| |||||||| | |||||||||||||||||||||||| ||| |||||||||    
T  19073529 ttaatcagggacacaatttcaataagtaaatatataatgacacaccttatagacaaatgtggaatacaccatataatctgacgtgacatggattaaatac 19073430  T
Q  347 acaaatgctcaatgattgaccatttaacttta-ctagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||| ||||||||||||||||||||||| | | | |||| |||||||||| ||||||||||||||||||||    
T  19073429 acaaattctcaatgattgaccatttaacttcaccaaaaaaaatcattctcataacttcaccatagaattttcc 19073357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 75 - 374
Target Start/End: Original strand, 18059066 - 18059366
Alignment:
Q  75 aaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaa 174  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||  || |  | |||||||||| ||||||||||||| || |||||||    
T  18059066 aaaagttattttgtttagtcaatagtataattgtcgatgtcatgttagctagtgtgctgctaatagaccactctaaaactaaactttaccttgttacaaa 18059165  T
Q  175 tcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagt 273  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||| |||| |||| || |||||| ||||||| ||| |||||||    
T  18059166 tcagtcatcatacaaaatattaaggggaatttcaatcttagtgcacaaacgagaatctatatttaattttaatctaatcaaggacacaattgcaataagt 18059265  T
Q  274 aaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaa 373  Q
    ||| ||||||| ||| |||||||||| ||||  |||||||||||||||||||||| ||| |||||||||||||||||||  ||||| |||||||||||||    
T  18059266 aaagatataataacacacattatggataaatatgcaatacaccatataatctgacatgacatgaattaaatacacaaatattcaataattgaccatttaa 18059365  T
Q  374 c 374  Q
    |    
T  18059366 c 18059366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 49 - 414
Target Start/End: Original strand, 18947288 - 18947642
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||||||| |||| ||||||||| |||||| ||||||||||||||| |||||||||  | | ||  ||||  ||||| |||| || ||||| ||||||||    
T  18947288 tgcagtcagaaaactgactttttcagaaaaattattttgtttagtcgatagtataacggccaatatcatgctagctagtgtcctgctggtgtaccactct 18947387  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatt 247  Q
    | ||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  18947388 aaaactaaactttaccttattacaaatcagtcctcatacaaaatattaaggggaatttcaatcttaatgcacaaatgagaatctatgtttacttttgatt 18947487  T
Q  248 taatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaataca 347  Q
    |||||||||||||| |||             |||||||||| |  |||||||  ||||  ||||||||||||||||||||||||| ||| ||||||||||    
T  18947488 taatcagggacacaattg------------ctataatgacacatcttatggatgaatgtacaatacaccatataatctgacgtgacatggattaaataca 18947575  T
Q  348 caaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatt 414  Q
    |||||| |||||||||||||||||||||| || |||||||| ||| |||||||||||||||||||||    
T  18947576 caaatgttcaatgattgaccatttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 42 - 418
Target Start/End: Complemental strand, 41713539 - 41713164
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaa-gttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgg 140  Q
    ||||| ||| |||||  ||||||| |||||| ||||| |||||||||||||||||||||||||||| || ||  ||||||||||| ||||||||||||||    
T  41713539 tctacggtgaagtcatcaaattgattttttttgaaaaagttattttgtttagtcaatagtataattatcaatatcatgtcagctagtgtcatgttggtgg 41713440  T
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-a 239  Q
    ||||||||| ||||||  ||||  |||||||||||||||| ||  |||||||| |||||| ||||||| | ||||||||||| ||||||||||||||| |    
T  41713439 accactctaaaactaagttttatcttattacaaatcagtcctcacacaaaata-taaggggaatttcatttttagtgcacaagtgagaatctatgtttaa 41713341  T
Q  240 ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaat 339  Q
    |||||||||||| ||||| ||| ||| |||||||| | ||||||||||| |  |||||| |||||| | || |||||||||||  |||||||| ||||||    
T  41713340 ttttgatttaattagggaaacaattgtaataagtatacatataatgacacatcttatgggcaaatgtgtaacacaccatataa--tgacgtgacatgaat 41713243  T
Q  340 taaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| ||||  ||||||||||  ||||||| || || |||||| ||||| |||||| ||||| ||||||||||||    
T  41713242 taaatacataaatattcaatgattggtcatttaatttcaccagaaaaatcattttcatgatttcactatagaattttcc 41713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 376
Target Start/End: Complemental strand, 15651168 - 15650890
Alignment:
Q  99 gtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaag 198  Q
    |||||| || ||||| ||||||| |||||||| |   |||||||||||||| || ||||||||||||||||||||||||||| || ||||||||||| ||    
T  15651168 gtataactgccgatgtcatgtcatctaatgtcctaccggtggaccactctaaaattaaactttactttattacaaatcagtcctcatacaaaatatttag 15651069  T
Q  199 ggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatg 297  Q
    |  ||||||||| ||||||||||| ||||| |||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||| || |||||    
T  15651068 gagaatttcaattttagtgcacaaatgagattctatgtttaattttgatttaatcaggaacacaattgcaataagtaaagatataatgacacaccttatg 15650969  T
Q  298 gacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactt 376  Q
    | |||||| | ||||||||||||||||| |||||||||| |||||||||||||||  | |||||||||| |||||||||    
T  15650968 ggcaaatgtgaaatacaccatataatcttacgtgatatggattaaatacacaaatatttaatgattgacgatttaactt 15650890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 67 - 376
Target Start/End: Original strand, 18779103 - 18779407
Alignment:
Q  67 ttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttacttt 166  Q
    |||||| ||||||||||||||||||||||||||||||| |  ||||| ||||| ||||| |||| |  |||  || ||||||| ||||||||||||| ||    
T  18779103 ttttttggaaaagttattttgtttagtcaatagtataactaccgatgtcatgtaagctagtgtcctactggatgatcactctaaaactaaactttacctt 18779202  T
Q  167 attacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttat-tttgatttaatcagggacacagttg 265  Q
    |||||||||||||| || || |||        |||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||| |||    
T  18779203 attacaaatcagtcgtcatataaa--------ggaaatttcaatcttagtgcacaaatgagaatctatgtttaactttgatttaatcaggaacacaattg 18779294  T
Q  266 gaataagtaaatatataatgacatac---attatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgat 362  Q
     |||||||||| ||| ||| ||| ||   ||||||| |||||| |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  18779295 caataagtaaagataaaataacacactttattatgg-caaatgtgcaataaaccatataatctgatgtgacatgaattaaatacacaaatgctcaatgat 18779393  T
Q  363 tgaccatttaactt 376  Q
    ||||||||||||||    
T  18779394 tgaccatttaactt 18779407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 48 - 406
Target Start/End: Original strand, 27138700 - 27139056
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgcc-atgtcagctaatgtcatgttggtggaccact 146  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||  ||   |||||| || |||||   |||||| ||| ||||| | || ||||| |||    
T  27138700 gtgcagtcagaaaattgatttttttagaaaaattattttgtttatcca---gtataactgccgatgtttatgtcaactagtgtcacgctgatggactact 27138796  T
Q  147 ctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttga 245  Q
    ||| || |||| ||||| ||||||||||| |||| || | |||||||||||||  ||||||||||||||||||||| || |||||||||||| |||||||    
T  27138797 ctaaaattaaattttaccttattacaaataagtcctcatgcaaaatattaaggtgaatttcaatcttagtgcacaaatgggaatctatgtttaattttga 27138896  T
Q  246 tttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaata 345  Q
    |||||||||||||||| ||| ||   ||||| ||||||||||| || |||||| |||||  |||||||||| ||||||||||||||| ||| ||| ||||    
T  27138897 tttaatcagggacacaattgcaacccgtaaagatataatgacacactttatgggcaaatatgcaatacaccgtataatctgacgtgacatggatt-aata 27138995  T
Q  346 cacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcacc 406  Q
    |||||||| |||||||||| ||||||||||| |  | |||||||||| |||||||||||||    
T  27138996 cacaaatgatcaatgattggccatttaacttcatcaaaaaagtcattttcatgacttcacc 27139056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 176 - 418
Target Start/End: Original strand, 34441729 - 34441969
Alignment:
Q  176 cagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagta 274  Q
    ||||| || |||||||||| ||||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  34441729 cagtcctcatacaaaatat-aaggggaatttcaattttagtgcacaaatgagaatctatgtttaattttgatttaatcagggacacaattgcaataagta 34441827  T
Q  275 aatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaac 374  Q
    || |||||| |||| |  |||||| |||||| |||||||||||||||||  ||||||| |||||||||||||||||||  ||||| ||||  ||||||||    
T  34441828 aagatataacgacacatcttatgggcaaatgtgcaatacaccatataat--gacgtgacatgaattaaatacacaaatattcaataattggtcatttaac 34441925  T
Q  375 tttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||| | |||||||||| |||||||||||||||||||||||||    
T  34441926 tttaccaaaaaagtcattttcatgacttcaccatagaattttcc 34441969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 115 - 417
Target Start/End: Complemental strand, 42005690 - 42005390
Alignment:
Q  115 catgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatctta 214  Q
    ||||||||||| ||| |||||| ||||||||| || || |||  |||| |||||||||||||||   || |||||||||| |||| ||||||||||||||    
T  42005690 catgtcagctagtgtgatgttgatggaccactttaaaattaagttttattttattacaaatcagctctcatacaaaatat-aaggaaaatttcaatctta 42005592  T
Q  215 gtgcacaattgagaatctatgttta-ttttgatttaatcaggg-acacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaata 312  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||| ||  |||||||||| || |||||||| || |||||| ||| || ||||||    
T  42005591 gtgcacaaatgagaatctatgtttaattttgatttaatcaggggacacaattacaataagtaaagatgtaatgacacaccttatgggcaa-tgtgcaata 42005493  T
Q  313 caccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaa 412  Q
    |||||||||||  ||||||| ||| |||||||| ||||||  |||||| |||| |||||||||| || | |||| ||||| |||||||||||||||||||    
T  42005492 caccatataat--gacgtgacatggattaaataaacaaatattcaatggttgatcatttaacttcaccaaaaaaatcattttcatgacttcaccatagaa 42005395  T
Q  413 ttttc 417  Q
    |||||    
T  42005394 ttttc 42005390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 19093831 - 19093640
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||||  || ||| ||| |||| |||||| |||    
T  19093831 tctacggtgcagtcaaaaaattgacttttttaaaaaagttaatttgtttaatcaatagtataattgttgatgttatctcaactagtgtcttgttggagga 19093732  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatcta 233  Q
    |||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||  ||||||||||||| ||||||| || |||||||    
T  19093731 ccactctaaaactaaactttaccttattacaaatcagtcctcttacaaaatattaaggagaatttcaatcttactgcacaaatgggaatcta 19093640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 42 - 301
Target Start/End: Original strand, 39788282 - 39788541
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||||  |||| ||| ||||||  |||||| ||||||||||||||||||||||| |||||||| |||||||  |  |||| || |||||||    
T  39788282 tctacggtgcagtctgaaaactgatttttttgaaaaagt-attttgtttagtcaatagtataactgtcgatgtcatgtcaattggtgtcctgctggtgga 39788380  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-at 240  Q
    |||||||| || |||||||||| |||||||||||||||  || ||| |||||||||||| ||||||||| ||||||||||| | ||||||||||||| ||    
T  39788381 ccactctaaaaataaactttaccttattacaaatcagttctcatacgaaatattaaggggaatttcaattttagtgcacaaatcagaatctatgtttaat 39788480  T
Q  241 tttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggaca 301  Q
    |||||||||| ||| |||| | ||| | |||||||  ||||||||||| |  |||||||||    
T  39788481 tttgatttaaccagagacataattgcagtaagtaacaatataatgacacattttatggaca 39788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 18514403 - 18514597
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||| |||||  ||| ||| ||||||  ||||||||||||||||||  |||||||||| |||  ||| ||||||| ||| |||| || |||||||    
T  18514403 tctacggtggagtcaggaaactgaattttttgaaaaagttattttgtttagctaatagtataactgttaatgtcatgtcaactagtgtcgtgctggtgga 18514502  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    ||||| ||  ||| ||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  18514503 ccactataagactgaactttactttattataaatcaatcatcatacaaaatattaatggaaatttcaatcttagtgcacaaatgagaatctatgt 18514597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 34441573 - 34441728
Alignment:
Q  64 gacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttac 163  Q
    |||||||||  |||||||||||| ||| |||||||||||||||| || |  ||||||||||| ||||||||||||||| |||| || |||||| |||||     
T  34441573 gacttttttgaaaaagttattttatttggtcaatagtataattgccgttatcatgtcagctagtgtcatgttggtggatcactttaaaactaagctttat 34441672  T
Q  164 tttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcac 220  Q
     |||||||||||||||| || ||||||||| |||||| ||||||||| |||||||||    
T  34441673 cttattacaaatcagtcctcatacaaaata-taaggggaatttcaattttagtgcac 34441728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 17244836 - 17244935
Alignment:
Q  137 gtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || || ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  17244836 gtggaccactctaaaactaaactttaccttattacaaatcactcctcatacaaaatattaaggaaaatttcaatcttagtgcacaaatgagaatctatgt 17244935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 135 - 326
Target Start/End: Original strand, 38249902 - 38250094
Alignment:
Q  135 tggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctat 234  Q
    ||||||||||||||| ||||||| ||||| || ||||||||||||| || |||||  ||||||||| |||||||||||||| || ||| |  ||||||      
T  38249902 tggtggaccactctaaaactaaattttaccttgttacaaatcagtcctcatacaa--tattaaggggaatttcaatcttagagcgcaaattggaatctga 38249999  T
Q  235 gtttattttgatttaatcagggacacagttggaataagtaaatatataatgacatacat----tatggacaaatgcgcaatacaccatataatctg 326  Q
     || ||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    ||| | |||||| |||||||| |||||||||||    
T  38250000 -ttaattttgatttaatcagggacacaattgcaataagtaaagatataatgacatatataccttattggcaaatgtgcaatacatcatataatctg 38250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 418
Target Start/End: Original strand, 43446343 - 43446510
Alignment:
Q  255 ggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgc 354  Q
    ||||||| ||| |||||||||| ||||| ||||||||  ||||  |||| | |||| |||||||||||| ||||||| |||| |||| |||| ||||||     
T  43446343 ggacacaattgtaataagtaaagatatagtgacataccctatgagcaaacgtgcaacacaccatataatttgacgtggtatgcattagatacgcaaatgt 43446442  T
Q  355 tcaatgattgaccatt----taactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||| ||||    |||||| ||   ||||||||||||||||||||||||||||||||||||    
T  43446443 tcaatgattgatcattctcataacttcaccgaaaaagtcattctcatgacttcaccatagaattttcc 43446510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 239 - 412
Target Start/End: Complemental strand, 30845026 - 30844850
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||| || ||| ||  || |||||||||| || |||||||| |  ||||||||||||| |||||| | ||||||||||||||||| ||| |    
T  30845026 attttgatttaattagagactcaaatgcaataagtaaagatttaatgacacatcttatggacaaatgtgcaatatatcatataatctgacgtgacatgga 30844927  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaa 412  Q
    |||||||||  |||||||||||||||| |||    ||||||| ||   ||||||||||||||| ||||||||||||||    
T  30844926 ttaaataca-gaatgctcaatgattgatcatgggattaacttcaccttaaaagtcattctcataacttcaccatagaa 30844850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 39788545 - 39788625
Alignment:
Q  338 attaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||| ||||||||    
T  39788545 attaaatacacaaatgctcaatgattgactatttgacttcactagaaaagtcattcttatgacttcaccataaaattttcc 39788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 7565673 - 7565511
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttg 136  Q
    |||| ||||| |||||||||||||| ||||||||||| |||||| ||||||||||  |||||| ||| ||||  ||||||||||||||| |||| |  ||    
T  7565673 gagcttctacggtgcagtcaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagctagtgtctttgtg 7565574  T
Q  137 gtggaccactctagaactaaacttta--ctttattacaaatcagtcatcgtacaaaatattaa 197  Q
     ||||||||| ||  |||||| ||||   ||||||||||||||||| || |||||||||||||    
T  7565573 atggaccactgtaacactaaattttattttttattacaaatcagtcctcatacaaaatattaa 7565511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 32652770 - 32652621
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||  |||||| ||| ||||  ||||||||||||||| |||| |  || | |||||||     
T  32652770 gtgcagtcaaaaaaataacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagctagtgtctttgtgatagaccacta 32652671  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |   | |||| |||||||||||||||||||||| || |||||||||||||    
T  32652670 tgacattaaattttactttattacaaatcagtcctcatacaaaatattaa 32652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 59529 - 59395
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaacttta 162  Q
    ||||||||||  |||||||||||| ||||| |||| | |||||| | ||||||||||||||||||| | | ||| |||||||   ||  |||||| ||||    
T  59529 tgacttttttgaaaaagttattttatttagccaattgcataattattgatgccatgtcagctaatggcttcttgatggaccaacgtaagactaaatttta 59430  T
Q  163 ctttattacaaatcagtcatcgtacaaaatattaa 197  Q
      |||||| ||||||||||||||||||||||||||    
T  59429 tcttattataaatcagtcatcgtacaaaatattaa 59395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 420
Target Start/End: Complemental strand, 22963544 - 22963398
Alignment:
Q  278 atataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat----ttaa 373  Q
    ||||||||||| || ||| | ||||||  | | ||||||||||||||||||||   ||  |||||||||||||| ||| ||||||||  |||    ||||    
T  22963544 atataatgacacaccttaagaacaaatatgtagtacaccatataatctgacgttgcattgattaaatacacaaaagctaaatgattggtcataggattaa 22963445  T
Q  374 ctttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||    
T  22963444 ctttaccagaaaagtcattcttatgacttcaccataaaattttccat 22963398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 22997966 - 22998079
Alignment:
Q  311 tacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcacc 406  Q
    ||||||||||||||||||||   ||  |||||||||||||| ||| ||||||||  |||    |||||||||| |||||||||||||| |||||||||||    
T  22997966 tacaccatataatctgacgttgcattgattaaatacacaaaagctaaatgattggtcataggattaactttaccagaaaagtcattcttatgacttcacc 22998065  T
Q  407 atagaattttccat 420  Q
    ||| ||||||||||    
T  22998066 ataaaattttccat 22998079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 396
Target Start/End: Original strand, 45414293 - 45414426
Alignment:
Q  267 aataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgac 366  Q
    ||||| |||| | |||||||||||  |||||  |||||  ||||| ||||||||| |||||||||| ||  |||||||| ||||||||||||| ||||||    
T  45414293 aataaataaagaaataatgacatattttatgtgcaaatatgcaatgcaccatatattctgacgtgacatagattaaatatacaaatgctcaataattgac 45414392  T
Q  367 cat----ttaactttactagaaaagtcattctca 396  Q
    |||    |||| |||||||||||| |||||||||    
T  45414393 catatgattaattttactagaaaaatcattctca 45414426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 415
Target Start/End: Complemental strand, 58206 - 58025
Alignment:
Q  237 ttattttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatg 336  Q
    ||||||| ||||||||||| ||||| ||| |||||||||| ||||  || || ||  |||| ||||||| ||||||||||||||||| |||  ||| |||    
T  58206 ttattttaatttaatcagg-acacaattgcaataagtaaaaatattgtggcacaccgtatgaacaaatgtgcaatacaccatataatttgatctgacatg 58108  T
Q  337 aattaaatacacaaatgctcaatgattgaccatt----taactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||||||| | ||| | ||||||||  ||||    | |||| |  | ||||||||||||||| | |||||||||||||||    
T  58107 aattaaatacagatatgttaaatgattggtcattctcatgacttcatcaaaaaagtcattctcataatttcaccatagaattt 58025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 6357188 - 6357043
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||| ||||  ||||| |||||| |||||| |  |||||||||||||| ||||| |  || ||||||||| ||      
T  6357188 agtcaagaaaatgacttttttgaaaaagtcatttaatttagccaatagcataattcttaatgccatgtcagctgatgtctttgtgatggaccactataag 6357089  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| |||||||||||| |||| |||| | | ||||||||||||    
T  6357088 actaaattttactttattataaataagtccttgaacaaaatattaa 6357043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 41465557 - 41465508
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  41465557 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcca 41465508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 17245108 - 17245160
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  17245108 atttaactttaccagaaaagtcattctcgcgacttcaccatagaattttccat 17245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 33551141 - 33551192
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  33551141 ttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttccata 33551192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 19313900 - 19313850
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  19313900 ttaacttcaccagaaaagtcattctaatgacttcaccatagaattttccat 19313850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 45411862 - 45411976
Alignment:
Q  80 ttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagt 179  Q
    |||||||||||||||||||  |||||||| |||| |||||| | |  |||   |||||||||||||||||  |||||| ||| ||| | |||||||||||    
T  45411862 ttattttgtttagtcaatatcataattgttgatgacatgtccgttggtgttccgttggtggaccactctaagactaaattttccttcactacaaatcagt 45411961  T
Q  180 catcgtacaaaatat 194  Q
    |||  ||||||||||    
T  45411962 cataatacaaaatat 45411976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 4264232 - 4264280
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||    
T  4264232 ttaactttaccagaaaagtcattatgatgacttcaccatagaattttcc 4264280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 13711512 - 13711465
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||    
T  13711512 ttaacttcaccagaaaagtcattctgatgacttcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 416
Target Start/End: Complemental strand, 36642023 - 36641988
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||||||||||||||||||||||||||||||    
T  36642023 agaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 17244779 - 17244837
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagt 100  Q
    |||| |||||||||| |||| ||||||||||  |||| |||||||||||||||||||||    
T  17244779 tctatagtgcagtcagaaaactgacttttttgaaaaaattattttgtttagtcaatagt 17244837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 27355307 - 27355193
Alignment:
Q  80 ttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagt 179  Q
    |||||||||||| ||||||  |||||||| ||||  ||||| |||  ||||  | |||||||||||||||  ||||||||||  || | |||||||||||    
T  27355307 ttattttgtttaatcaatatcataattgttgatgatatgtccgctggtgtcccgctggtggaccactctaagactaaactttcattcactacaaatcagt 27355208  T
Q  180 catcgtacaaaatat 194  Q
    |||  ||||||||||    
T  27355207 cataatacaaaatat 27355193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 33660523 - 33660569
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||    
T  33660523 ttaacttaactagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 418
Target Start/End: Complemental strand, 19093462 - 19093413
Alignment:
Q  369 tttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| || |||||| |||||||||||||||||||||| ||||||||    
T  19093462 tttaacttcaccagaaaaatcattctcatgacttcaccataaaattttcc 19093413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 31861943 - 31861894
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcca 31861894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 40912471 - 40912516
Alignment:
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| |||||||||||||||||||||| || |||||||||||||    
T  40912471 actaaattttactttattacaaatcagtcctcatacaaaatattaa 40912516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 2325525 - 2325573
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||| ||| ||||||||||||||||||||    
T  2325525 ttaacttcacgagaaaagtcattcacataacttcaccatagaattttcc 2325573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 4166970 - 4166922
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||||    
T  4166970 ttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4166922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 17054251 - 17054299
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||| ||||||||||||||||||||||||    
T  17054251 ttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcc 17054299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 17071892 - 17071940
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||| ||||||||||||||||||||||||    
T  17071892 ttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcc 17071940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 18494423 - 18494471
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||| |||||||||||||| ||||||||||    
T  18494423 ttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcc 18494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 19424783 - 19424831
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||| ||||||||||||||||||||| ||||||||    
T  19424783 ttaacttcaccagaaaagccattctcatgacttcaccataaaattttcc 19424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 33902116 - 33902060
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccatactttt 426  Q
    ||||||| || |||||||||||||| | ||||||| ||||||||||||||| |||||    
T  33902116 ttaacttcaccagaaaagtcattctaacgacttcatcatagaattttccattctttt 33902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 7007058 - 7007093
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||| |||||||||||||||||||||||||||||||    
T  7007058 aaaaatcattctcatgacttcaccatagaattttcc 7007093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 4763665 - 4763627
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  4763665 agaaaagtcattttcatgacttcatcatagaattttcca 4763627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 18514784 - 18514822
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  18514784 aaaagtcattctcatgacttcactataaaattttccata 18514822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 26357614 - 26357576
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  26357614 agaaaagtcattttcatgacttcaccataaaattttcca 26357576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 15651527 - 15651471
Alignment:
Q  48 gtgcagtcaaaaaattgact-tttttagaaaagttattttgtttagtcaatagtataa 104  Q
    ||||||||| |||||||||  ||||||||||| ||||||||||||| |||||||||||    
T  15651527 gtgcagtcagaaaattgaccctttttagaaaa-ttattttgtttagccaatagtataa 15651471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 31570900 - 31570937
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31570900 agaaaagttattctcataacttcaccatagaattttcc 31570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 22997495 - 22997543
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgttt 90  Q
    ||||||| ||| ||| |||| ||||||||||| ||||||||||||||||    
T  22997495 tctacagggcaatcataaaactgacttttttaaaaaagttattttgttt 22997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 419
Target Start/End: Complemental strand, 44913697 - 44913661
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||||||| || |||||||||||||||||||||||    
T  44913697 aaaagtcattttcgtgacttcaccatagaattttcca 44913661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 49 - 418
Target Start/End: Original strand, 24496 - 24865
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||||| |||||  ||||||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||| ||||||||||||||| ||||||    
T  24496 tgcagtaaaaaagctgacttttttagaaaagttattttgttaagccaatagtataactgccgatgtcatgtcagctagtgtcatgttggtggatcactct 24595  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttattttgattt 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24596 agaactaaactttaccttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaaatgagaatctatgtttattttgattt 24695  T
Q  249 aatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacac 348  Q
    ||||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24696 aatcagggacacaattggaataagtaaatatataataacataccttatgggcaaatgcgcaatacaccatataatctgacgtgacatgaattaaatacac 24795  T
Q  349 aaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||| || || |||||| |||||||||| ||||  ||||||||||||||    
T  24796 aaatgctcaatgattgaccatttaatttcaccagaaaaatcattctcataactttgccatagaattttcc 24865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 48 - 422
Target Start/End: Original strand, 23402049 - 23402423
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || |||||  |||||||||| ||||||||||| |||||||||    
T  23402049 gtgcagtcaaaaaactgacttttttaaaaaagttattttgtttagccaatagtataactgccgatgttatgtcagctagtgtcatgttgggggaccactc 23402148  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttattttgatt 247  Q
    || ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||    
T  23402149 taaaactaaactttatcctattacaaatcagtcatcgtacaaaatattaagggaaatttcagtcttagtgcacaaatgagaatcaatgtttattttgatt 23402248  T
Q  248 taatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaataca 347  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  23402249 taatcagggacacaattgaaataagtaaatatataatgacatatcttatggacaaatgcgcaatacaccatataatatgacgtgacatgaattaaataca 23402348  T
Q  348 caaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccatac 422  Q
    || ||| |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  23402349 cagatgttcaatgattgaccatttaacttcaccagaaaagtcattctcatgacttcgccatagaattttccatac 23402423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 48 - 410
Target Start/End: Original strand, 22954990 - 22955352
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||| | |||||| ||||||||| |||||||||||||||||| | ||||||||| |   | || |||||  |||| |||| || |||||||||||||    
T  22954990 gtgcagttagaaaattaacttttttaaaaaagttattttgtttagcctatagtataactactgctgtcatgtt-gctattgtcctgctggtggaccactc 22955088  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttatt-ttgat 246  Q
    || ||||||||||||| |||||||||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||    
T  22955089 taaaactaaactttaccttattacaaatcagttctcatacaaaatattaagggaaatttcaatcttagtgcacaaatgagaatctatgtttaatgttgat 22955188  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    ||||| ||||||||| ||| |||||||||| ||| |||||||||| |||||  |||||| ||||||||||||||||| |||||||| ||| |||||||||    
T  22955189 ttaataagggacacaattgcaataagtaaagatacaatgacataccttatgagcaaatgtgcaatacaccatataatttgacgtgacatggattaaatac 22955288  T
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatag 410  Q
    ||||||| ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  22955289 acaaatgttcaataattgaccatttaacttcaccagaaaagtcattctcattacttcaccatag 22955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 66 - 418
Target Start/End: Original strand, 37853990 - 37854343
Alignment:
Q  66 cttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactt 165  Q
    ||||||| |||||||||||||||||||||||||||||||  || | || || |||||||| |||| |||||||||||||||||| || ||||||||||||    
T  37853990 cttttttggaaaagttattttgtttagtcaatagtataaccgtaggtgtcacgtcagctagtgtcttgttggtggaccactctaaaattaaactttactt 37854089  T
Q  166 tattacaaat-cagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagt 263  Q
    |||| ||||| ||||| || |||||||||||||||| |||||||||||||||| |||| ||| |||||||||||| |||||||||||||||||||||| |    
T  37854090 tattccaaattcagtcctcatacaaaatattaaggggaatttcaatcttagtgtacaaatgaaaatctatgtttaattttgatttaatcagggacacaat 37854189  T
Q  264 tggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgatt 363  Q
    || ||| |||||| ||||||  |||||| |||||  |||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||    
T  37854190 tgcaatcagtaaagatataa--acataccttatgagcaaatgtgcaatacaccatataatgtgacgtgacatggattaaatacacaaatgctcaataatt 37854287  T
Q  364 gaccatttaactttactagaaaagtcattctcatgac-ttcaccatagaattttcc 418  Q
    |||||||||| || || |||||||||||||||||||| |||||  |||||||||||    
T  37854288 gaccatttaatttcaccagaaaagtcattctcatgactttcactctagaattttcc 37854343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 58 - 416
Target Start/End: Original strand, 4618442 - 4618801
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||||||||||||||  |||| ||||||||||||  |||| |||||| |||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  4618442 aaaattgacttttttgaaaaacttattttgtttaaccaatggtataactgtcgatgtcatgtgagctaatgttctgctggtggaccactctaaaactaaa 4618541  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcaggg 256  Q
    |||||  ||| ||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||     
T  4618542 ctttatcttactacaaatcagtcatcatacaaaatattaaggggaatttcaatcttggtgcacaaatgagaatctatgtttaattttgatttaatgaggt 4618641  T
Q  257 acacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctc 356  Q
    | ||| ||| ||||| |||||||||||||||| |  ||||| ||||||| ||||||||||||||||| ||| | || |||||||||||||||||||| ||    
T  4618642 atacaattgcaataaataaatatataatgacacattttatgaacaaatgtgcaatacaccatataatttgaagcgacatgaattaaatacacaaatgttc 4618741  T
Q  357 aatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||   ||||||||||||| | |||| ||||| ||||||||| ||| |||||||||    
T  4618742 aatgattagtcatttaactttaccaaaaaaatcattttcatgactttaccgtagaatttt 4618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 44 - 404
Target Start/End: Complemental strand, 49002599 - 49002241
Alignment:
Q  44 tacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggacc 143  Q
    ||||||| ||||| |||| ||| ||||||  |||||||||||| |||| ||||||||||||||||||||| |||  ||||||||||| || |||||||||    
T  49002599 tacagtgtagtcagaaaactgatttttttgaaaaagttattttatttaatcaatagtataattgtcgatgtcatagcagctaatgtcctgctggtggacc 49002500  T
Q  144 actctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attt 242  Q
    |||||| ||||||||||||| | |||||||||||||| || |||||||||||||||| ||||| ||||||||||||||| || |||||||||||| ||||    
T  49002499 actctaaaactaaactttacctcattacaaatcagtcctcatacaaaatattaaggggaattttaatcttagtgcacaaatgggaatctatgtttaattt 49002400  T
Q  243 tgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaa 342  Q
    ||||||||||||  ||||| ||| |||||||||| ||||||||||  || ||| ||  ||||| |||||||||||||||||||||  || |||| |||||    
T  49002399 tgatttaatcagacacacaattgcaataagtaaagatataatgac--accttaagggaaaatgtgcaatacaccatataatctgatatggtatggattaa 49002302  T
Q  343 atacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttca 404  Q
    |||||||||| |||||||||||  ||||| |||| | || |||| ||||| |||||||||||    
T  49002301 atacacaaatactcaatgattgttcatttcacttca-taaaaaaatcattatcatgacttca 49002241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 90 - 400
Target Start/End: Complemental strand, 5781844 - 5781536
Alignment:
Q  90 tagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaa 189  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||||| |||||| || ||||||  ||||||||||||||||||||||||| |||||    
T  5781844 tagtcaatagtataattgccgatatcatgtcagctagtgtcatgttggtgcaccactttaaaactaagttttactttattacaaatcagtcatcatacaa 5781745  T
Q  190 aatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacacagttggaataagtaaatatataatgaca 288  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||| |||||||||||    
T  5781744 aatataaaggg-aatttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaatcaaggacacaattgcaataaataaagatataatgaca 5781646  T
Q  289 tacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagt 388  Q
     |  |||||| |||||  ||||||||||||||||  |||||||| ||| |||||||||||||||  | ||||||||| ||||||||||||| |||||| |    
T  5781645 cattttatggtcaaatatgcaatacaccatataa--tgacgtgacatggattaaatacacaaatatttaatgattgatcatttaactttaccagaaaaat 5781548  T
Q  389 cattctcatgac 400  Q
    |||| |||||||    
T  5781547 cattttcatgac 5781536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 42 - 404
Target Start/End: Complemental strand, 7743307 - 7742933
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||| ||||| |||  |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||| ||||    
T  7743307 tctacggtggagtcagaaatctgacttttctagaaaagttattttgtttagtcaatagtataactgtcgatgtcatgtcggctaatgtaatgttgatgga 7743208  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtg-----------cacaattgagaat 230  Q
    |||||||| ||||||||||||| |||||||||| ||| | || || |||||||||| |   |||||||||||||||            |||| |||||||    
T  7743207 ccactctaaaactaaactttaccttattacaaagcagccctcatataaaatattaaagagcatttcaatcttagtgtataaatggaaaacaaatgagaat 7743108  T
Q  231 ctatgttt-attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacg 329  Q
    |||||||| ||||| |||||||||||| |||| ||| |||||||||| |||||||||||  | |||||||||||||  |||||||||||||||||| |||    
T  7743107 ctatgtttaattttaatttaatcaggggcacaattgcaataagtaaagatataatgacacgccttatggacaaatgtacaatacaccatataatctaacg 7743008  T
Q  330 tgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttca 404  Q
    ||| ||  ||||||||||||||| |||||||||||| ||||| |||| |  | |||||||||| | |||||||||    
T  7743007 tgacatagattaaatacacaaatactcaatgattgatcattttacttcatcaaaaaagtcatttttatgacttca 7742933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 102 - 420
Target Start/End: Original strand, 8133290 - 8133611
Alignment:
Q  102 taattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaaggga 201  Q
    |||| ||| ||| ||||||||||  |||| || ||||| ||||||||| ||||||||||||| |||||||||||||||| || |  |||||||||||||     
T  8133290 taatagtcaatgtcatgtcagctggtgtcttgctggtgaaccactctaaaactaaactttaccttattacaaatcagtcttcatgtaaaatattaagggg 8133389  T
Q  202 aatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggac 300  Q
    ||||||||||||| ||||||| | |||||||| |||| ||||||||||||| |||||| || ||| |||||||||  ||||||||||| || ||||   |    
T  8133390 aatttcaatcttactgcacaaataagaatctacgtttaattttgatttaattagggacgcaattgcaataagtaatgatataatgacagaccttataagc 8133489  T
Q  301 aaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgacca--tttaactttactagaaaagtcattctcatg 398  Q
    ||| | |||||||||||||||||||||||||   ||||||||||||||||||||| ||||||||| ||  |||||||| || | |||||| ||||| |||    
T  8133490 aaacgtgcaatacaccatataatctgacgtgtcttgaattaaatacacaaatgcttaatgattgatcatttttaacttcaccaaaaaagttattcttatg 8133589  T
Q  399 acttcaccatagaattttccat 420  Q
    |||||||  |||||||||||||    
T  8133590 acttcacagtagaattttccat 8133611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 52 - 418
Target Start/End: Complemental strand, 4902687 - 4902340
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||| || ||||  ||||| || || |||| ||   ||  ||||||||| |    
T  4902687 agtcagaaaattgacttttttgaaaaagttattttgtttagtcaatagtataactgccgatatcatgttagttattgtcctgccagtaaaccactctaaa 4902588  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaa 250  Q
    |||||||||||| ||||||||||| |||  || |||||||||||||||| |||||| ||||||||||| ||||  |||||||||||| ||||||||||||    
T  4902587 actaaactttaccttattacaaattagtactcatacaaaatattaaggggaatttctatcttagtgcataatttggaatctatgtttaattttgatttaa 4902488  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    ||||||||||  ||| ||||||                    |||||| |||||| || ||||||||||||||||||||||| ||| |||||||||| ||    
T  4902487 tcagggacactattgcaataag--------------------ttatgggcaaatgtgctatacaccatataatctgacgtgacatggattaaatacataa 4902408  T
Q  351 atgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||| ||||| ||||||| || || | |||| | ||| |||||||||||||||| ||||||||    
T  4902407 atgctcaataattgatcatttaaattcaccaaaaaaattattttcatgacttcaccataaaattttcc 4902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 141 - 288
Target Start/End: Complemental strand, 40382167 - 40382018
Alignment:
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-a 239  Q
    ||||||||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  40382167 accactctaaaactaaactttaccttattacaaatcagtccgcatacaaaatattaagggaaatttcaatcttagtgcacaaatgataatctatgtttaa 40382068  T
Q  240 ttttgatttaatcagggacac-agttggaataagtaaatatataatgaca 288  Q
    |||| ||||||| |||||||| | ||| |||||||||| |||||||||||    
T  40382067 tttttatttaattagggacacaaattgtaataagtaaagatataatgaca 40382018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 25470792 - 25470643
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||  |||||| ||| ||||  ||||||||||||| | |||| |  || ||||||||      
T  25470792 gtgcagtcaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagcgagtgtctttgtgatggaccaccg 25470693  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| |||||||||||||||||||||| ||||||||||||||||    
T  25470692 taacactaaattttactttattacaaatcagtcctcgtacaaaatattaa 25470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 236
Target Start/End: Original strand, 10674921 - 10675124
Alignment:
Q  35 gagagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtc--agctaatgtcat 132  Q
    |||||| ||||| ||||| |||  ||| | ||||||||| |||| |||||||||||| |||||||||||| |||  ||||||||||  | ||| |||  |    
T  10674921 gagagcttctacggtgcaatcaggaaactaacttttttaaaaaaattattttgtttattcaatagtataactgttaatgccatgtctcaactagtgttct 10675020  T
Q  133 gttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatct 232  Q
    | | ||||| |||||||  |||||||||||||||||||||||| |||| || |||||||||||||||| ||||| ||||||| | ||||| || |||||     
T  10675021 gcttgtggatcactctaagactaaactttactttattacaaattagtcctcatacaaaatattaaggggaatttaaatcttaatacacaaatgggaatcc 10675120  T
Q  233 atgt 236  Q
    ||||    
T  10675121 atgt 10675124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 416
Target Start/End: Complemental strand, 19786463 - 19786282
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||| |||| || ||| |||||||||| ||||||||||| || |||  |||||||| ||||| || |||||||| |||||||  |||||    
T  19786463 attttgatttaatcaaggactcaattgcaataagtaaagatataatgacacaccttacagacaaatgtgcaatgcatcatataatatgacgtggcatgaa 19786364  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||||||||||||||| | |   |||    ||||||| |  |||||||||||||||||||||||| | |||||||||    
T  19786363 ttaaatacacaaatgctcaattagtagacatatgattaacttaataagaaaagtcattctcatgacttcatcgtagaatttt 19786282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 5657619 - 5657669
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5657619 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttccat 5657669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 418
Target Start/End: Complemental strand, 40382016 - 40381940
Alignment:
Q  342 aatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||| |||| || ||||||| | |||||||||| || ||||||||||||||||| |||||||| |||||||||||    
T  40382016 aatacataaatacttaatgattaatcatttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcc 40381940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 420
Target Start/End: Complemental strand, 8861297 - 8861258
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8861297 agaaaagtcattctcatgacttcaccatagaattttccat 8861258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 10359352 - 10359402
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10359352 ttaattttaccagaaaagtcattatcatgacttcaccatagaattttccat 10359402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 34362286 - 34362336
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  34362286 ttaactttcctagaaaagtcattctcataatttcaccatagaattttccat 34362336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 6546542 - 6546493
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  6546542 ttaacttcactagaaaaatcattcttatgacttcaccatagaattttcca 6546493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 26524476 - 26524513
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26524476 agaaaagtcattctcatgacttcaccatagaattttcc 26524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 18797352 - 18797304
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||    
T  18797352 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 18797304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 25691683 - 25691729
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||    
T  25691683 ttaacttcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 4582942 - 4582893
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||||||||| || |||||||||||||||||||||||    
T  4582942 ttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcca 4582893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 15612896 - 15612945
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || ||||| || ||||||||||||||||||||||||||||||    
T  15612896 ttaacttcacaagaaacgttattctcatgacttcaccatagaattttcca 15612945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 41765227 - 41765264
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||||||||||||||||||| |||||||||    
T  41765227 agaaaagtcattctcatgacttcaccatggaattttcc 41765264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 48928712 - 48928748
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48928712 agaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 241034 - 241069
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||| |||||||||||||||||||||||||    
T  241034 aaaagtcattttcatgacttcaccatagaattttcc 241069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 8759592 - 8759509
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccact 146  Q
    ||||||||||  |||||| ||||| ||||| |||||  |||||||| |||| ||||||||||| |||| | ||| |||||||||    
T  8759592 tgacttttttgaaaaagtcattttatttagccaataacataattgttgatgtcatgtcagctagtgtctttttgatggaccact 8759509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 24211764 - 24211717
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||| || | |||||||||||| ||||||||||||||||||||||    
T  24211764 ttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Complemental strand, 30055536 - 30055501
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| |||||||||||||||||||||||    
T  30055536 aaaagtcattcttatgacttcaccatagaattttcc 30055501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 8299238 - 8299192
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||    
T  8299238 ttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Original strand, 10675343 - 10675377
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattt 415  Q
    |||||||||||| ||||||||||||||||||||||    
T  10675343 agaaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 17842347 - 17842392
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagtta 82  Q
    |||| ||||| |||||||||| |||||||||||||| |||||||||    
T  17842347 gagcttctacggtgcagtcaagaaattgacttttttggaaaagtta 17842392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 33688405 - 33688446
Alignment:
Q  376 ttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||| ||||||||||||||||| ||||||||||| |||||||    
T  33688405 ttaccagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 37109895 - 37109846
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||||| | ||||||||||||||||||||||||    
T  37109895 ttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcca 37109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 17842724 - 17842772
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||| | |||||||||||||||||||||||    
T  17842724 ttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 17842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 21991659 - 21991611
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| ||||||||||||||||||| |||||||||||    
T  21991659 ttaacttcaccataaaaatcattctcatgacttcaccctagaattttcc 21991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 32432480 - 32432432
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||| ||||| || ||||||||||||||||||||||    
T  32432480 ttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 32432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 32821191 - 32821239
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| ||||| |||||||||||||||||||||||||    
T  32821191 ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 32821239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 44 - 415
Target Start/End: Original strand, 38392301 - 38392673
Alignment:
Q  44 tacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggacc 143  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||| ||||| ||||| ||  |||  ||| ||||||| ||||||||||||| |||    
T  38392301 tacagtacagttagaaaattgacttttttagaaaagttattttgtttagccaataatataactgctgatatcatatcagctagtgtcatgttggtgaacc 38392400  T
Q  144 actctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttt 242  Q
      |||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||    
T  38392401 gttctaaaactaaattttacattattacaaatcagtcatcttacaaaatattaagggaaatttcaatcttagtgcataaatgaaaatctatgtttaattt 38392500  T
Q  243 tgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaa 342  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||| | ||| ||| |||||    
T  38392501 tgatttaatcagggacacaattgcaataagtaaatatataatgacacacattatgggcaaatgtgcaatacatcatataatctgtcatgacatggattaa 38392600  T
Q  343 atacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||||||| ||||||| |||||||||||||| || | ||||||||||||||||||||||||||| |||||    
T  38392601 atacacaaatgttcaatgactgaccatttaacttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 52 - 417
Target Start/End: Original strand, 32180432 - 32180794
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||| ||  |||| |||||| |||| |||| || ||||||||||||||| |    
T  32180432 agtcagaaaattgacttctttggaaaagttattttgtttagccaatagtataactgctgatgtcatgtcggctagtgtcctgctggtggaccactctaaa 32180531  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaa 250  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  32180532 actaaactttaccttattacaaatcagtcctcatacaaaatattaaggggaatttcaatcttagtgcacaaatggaaatctatgtttaattttgatttaa 32180631  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    ||||||||||| ||| |||||||||| ||||||||||| || |||  |||||||| |||||  ||| ||||||||||||||| || ||||||||||||||    
T  32180632 tcagggacacaattgcaataagtaaagatataatgacacacctta--gacaaatgtgcaat--accgtataatctgacgtgacataaattaaatacacaa 32180727  T
Q  351 atgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| || |||||||    
T  32180728 atgctcaatgattaaccatttaacttcactagaaaagtcattctcataacttcaccgtacaattttc 32180794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 42 - 418
Target Start/End: Original strand, 40640301 - 40640682
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaa-gttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgg 140  Q
    ||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || | ||| ||||||| ||  || | || |||| |    
T  40640301 tctacggttcagtcaaaaaattgactttttttgaaaaagttattttgtttagtcaatagtataagtgcctatgtcatgtcaactggtgccctgctggtag 40640400  T
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta- 239  Q
    | ||||||| |||||||||||| ||||||||||||||||| || |||||||||||||||  ||||||||| ||||||||||| ||||||| ||| ||||     
T  40640401 atcactctaaaactaaactttattttattacaaatcagtcctcatacaaaatattaaggagaatttcaattttagtgcacaaatgagaatatatctttaa 40640500  T
Q  240 ttttgatttaatcagggacacagttgga---ataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatg 336  Q
    |||||||||||||| ||||||| ||| |   ||||||||| ||||||||||| |  |||||| |||||| ||||||||||||||||| |||||||| |||    
T  40640501 ttttgatttaatcaaggacacaattgcagcaataagtaaaaatataatgacacatcttatgggcaaatgtgcaatacaccatataatatgacgtgacatg 40640600  T
Q  337 aattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
     ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  40640601 gattaaatacacaaatgctcaatgattgaccatttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 40640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 48 - 417
Target Start/End: Original strand, 19606590 - 19606961
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaa-gttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccact 146  Q
    ||||| ||| ||||||| ||||||| ||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| |||| || | ||||||||||    
T  19606590 gtgcattcagaaaattggctttttttgaaaaagttattttgtttagtcaatagtattaccgccgatgtcatgtcagctagtgtcctgctcgtggaccact 19606689  T
Q  147 ctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttga 245  Q
    ||| ||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||| |||||||| ||  |||||||||||| ||||||    
T  19606690 ctaaaactaaactttaccttattacaaatcagtcctcatacaaaatattaaggggaatttcaatcttggtgcacaaatggaaatctatgtttaattttga 19606789  T
Q  246 tttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaata 345  Q
    |||||| ||||||||  ||| || ||||||| ||||||||||| || ||||||| |||||  |||||||||||||||||||||||||  |||||||||||    
T  19606790 tttaataagggacacgattgcaacaagtaaagatataatgacacaccttatggaaaaatgttcaatacaccatataatctgacgtgacctgaattaaata 19606889  T
Q  346 cacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||||||||| ||||  |||||||||| || |||||||||||| | || |||||||||||||||||||    
T  19606890 cacaaatgctcaatcattggtcatttaacttcaccagaaaagtcatttttataacttcaccatagaattttc 19606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 58 - 418
Target Start/End: Original strand, 7568413 - 7568767
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||| |||| |||||  |||||||||||||||||||||||||||||| |||||||   |||||||||| |||  || ||||||||||||||| |||||||    
T  7568413 aaaactgacatttttgaaaaagttattttgtttagtcaatagtataactgtcgattttatgtcagctagtgttctgctggtggaccactctaaaactaaa 7568512  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcaggg 256  Q
    ||||       |||||||||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  7568513 cttt-------tacaaatcagtcctcatacaaaatattaaggggaatttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaatcagag 7568605  T
Q  257 acacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctc 356  Q
    ||||| ||| |||||||||| ||||||||||| || |||||  |||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  7568606 acacaattgtaataagtaaagatataatgacacactttatgtgcaaatgtgcaatactgcatataatctgacgtgacatgaattaaatacacaaatgctc 7568705  T
Q  357 aatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| |||||||||||| || | |||||| ||| ||||||||||| ||| || ||||||    
T  7568706 aatgatttaccatttaacttcaccaaaaaagtaattttcatgacttcatcattgagttttcc 7568767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 42 - 420
Target Start/End: Original strand, 49359299 - 49359678
Alignment:
Q  42 tctacagtgcagtcaaaaaattgactttttt-agaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgg 140  Q
    ||||| ||||||| | ||||||||||||||| | |||||||||||||||||| || ||||||||    ||||| ||||||||||| |||| |  |||| |    
T  49359299 tctacggtgcagttagaaaattgacttttttgaaaaaagttattttgtttagccattagtataacaaccgatgtcatgtcagctagtgtcctagtggtag 49359398  T
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta- 239  Q
    |||| |||| ||||||||||||| |||||| ||||||||| || ||||||||||||| || ||||||||||||||||||||| |   ||||||||||||     
T  49359399 accaatcta-aactaaactttaccttattataaatcagtcctcatacaaaatattaaagggaatttcaatcttagtgcacaaatagaaatctatgtttaa 49359497  T
Q  240 ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaat 339  Q
    |||||||||||||||||||||| ||| | |||||||| ||||||||||| || |||||  |||||| |||||||| |||||||| |||||||  ||| ||    
T  49359498 ttttgatttaatcagggacacaattgcattaagtaaagatataatgacacaccttatgagcaaatgtgcaatacatcatataatatgacgtgtcatggat 49359597  T
Q  340 taaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||||||| |||||||||| ||||||||||| || | |||||||||| |||||||||||||||||||||||||||    
T  49359598 taaatacacaaatgttcaatgattggccatttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttccat 49359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 52 - 418
Target Start/End: Original strand, 47930346 - 47930714
Alignment:
Q  52 agtcaaaaaattgactttttt--agaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactcta 149  Q
    ||||| |||||||||||||||  | |||| |||||||||||||  |||||||||| || ||||| ||| |||| || |||| |||| |||||||||||||    
T  47930346 agtcagaaaattgacttttttgaaaaaaaattattttgtttagctaatagtataactgccgatgtcatatcagttagtgtcctgttagtggaccactcta 47930445  T
Q  150 gaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgattt 248  Q
     |||||| |||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  47930446 aaactaagctttactttattacaaatcagtcattatacaaaatattaaggggaatttcaatcttagtgcacaaatgagaatctatgtttaattttgattt 47930545  T
Q  249 aatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacac 348  Q
    ||| ||||||||| ||| ||||||||||   |||||||||    ||| ||||||| | |||||||||||||||||| ||  | | ||| |||||||||||    
T  47930546 aatgagggacacaattgcaataagtaaaggaataatgacacgtcttagggacaaaggtgcaatacaccatataatc-gatataacatggattaaatacac 47930644  T
Q  349 aaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||| ||||||||||  |||||||||| || |||||| ||||| |||||||||||||||||||||||||    
T  47930645 aaatgttcaatgattggtcatttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 67 - 418
Target Start/End: Original strand, 45879183 - 45879546
Alignment:
Q  67 ttttttagaaaagttattttgtttagtcaatagta---taattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttac 163  Q
    |||||||||||||||||||||||||| ||||||||   ||||||  |||| ||||||||||| |||| ||   |||||||||| || | |||||||||||    
T  45879183 ttttttagaaaagttattttgtttagccaatagtaatataattgctgatgtcatgtcagctagtgtcctg---gtggaccactttaaagctaaactttac 45879279  T
Q  164 tttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacacag 262  Q
     |||||||||||||||| || |||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| | |||     
T  45879280 cttattacaaatcagtcctcatacaaaatataaaggggaatttcaatgttagtgcacaaatgagaatctatgtttaattttgatttaatcaggaaaacaa 45879379  T
Q  263 ttggaataagtaaatatataatgacatacattatgg-----------acaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaa 351  Q
    ||  |||||||||| |||||| |||| || ||||||           ||||||| |||||||||||||||||||||||||  ||| ||||||||||||||    
T  45879380 tttcaataagtaaagatataacgacacaccttatgggcaaatgtgcaacaaatgtgcaatacaccatataatctgacgtggcatggattaaatacacaaa 45879479  T
Q  352 tgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  45879480 tgctcaatgattggccatttaactttaccagaaaagtcattctcatgacttcagcatagaattttcc 45879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 48 - 416
Target Start/End: Complemental strand, 44881153 - 44880794
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||| ||| |||||| |||||||  |||||| |||||||||||| |  |||||||||||||      ||||||| || |||  || ||  |||||| ||    
T  44881153 gtgcactcagaaaattaactttttaggaaaagatattttgtttagcc--tagtataattgtc------atgtcagttagtgttctgctgacggaccaatc 44881062  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgat 246  Q
    || ||||||||||||| ||||||||||||| || || || ||||||||||||| |||||||||| |||||||||| || |||||||||||| ||||||||    
T  44881061 taaaactaaactttaccttattacaaatcaatcctcatataaaatattaaggggaatttcaatcctagtgcacaaatgtgaatctatgtttaattttgat 44880962  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    ||||||||||||||| ||| |||||||||| |||||||||||  | |||||  |||||| |||||||||||||| ||||||||||| ||| |||||||||    
T  44880961 ttaatcagggacacaattgtaataagtaaagatataatgaca-cccttatgagcaaatgtgcaatacaccatattatctgacgtgacatggattaaatac 44880863  T
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    | ||||| |||||||||||||||||||||| | || |||||||||| |||| | |||||| || ||||||    
T  44880862 ataaatgttcaatgattgaccatttaacttcatta-aaaagtcattttcataatttcaccgtaaaatttt 44880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 49 - 417
Target Start/End: Complemental strand, 26000902 - 26000525
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||||||| ||| |||| ||||||  ||||||||||||||| | |||||||||||| |||||||  ||||||||||| | || |  || | |||||||||    
T  26000902 tgcagtcagaaatttgaattttttgtaaaagttattttgttgaatcaatagtataactgtcgatatcatgtcagctactatcctactgatagaccactct 26000803  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatt 247  Q
    | |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  26000802 aaaactaaactttactttattacaaatcagtactcatacaaaatattaagggaaatttcaattttagtgcacaaatgagaatctatgtttaattttgatt 26000703  T
Q  248 taatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataat---------ctgacgtgatatgaa 338  Q
    ||||||  |||||| ||| ||||||||||   ||||||||| || ||| |   ||||  |||||||||| ||||||         || |||||| |||||    
T  26000702 taatcaatgacacaattgcaataagtaaagcgataatgacacactttacgagaaaatatgcaatacaccgtataatcctataatcctaacgtgacatgaa 26000603  T
Q  339 ttaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||||||||||| ||||| || || ||||||| ||||| | |||| | ||| |||| |||| |||||| |||||||    
T  26000602 ttaaatacacaaatgttcaataatcgatcatttaattttacca-aaaaattattttcataactttaccataaaattttc 26000525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 319
Target Start/End: Original strand, 7758122 - 7758372
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||  |||||||||||           ||||| ||||||| ||||||     
T  7758122 aaaatttacttttttgaaaaagttattttgtttagtcaatagtataattgccgatatcatgtcagcta-----------gtggagcactctaaaactaag 7758210  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcaggg 256  Q
    |||||  || ||||||||||||| || |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  7758211 ctttatctttttacaaatcagtcttcatacaaaatat-aaggggaatttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaattaggg 7758309  T
Q  257 acacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccata 319  Q
    ||||| ||| |||||||||| ||||||||||  || |||||| ||||||  ||||||||||||    
T  7758310 acacaattgcaataagtaaagatataatgacgcaccttatgggcaaatgtacaatacaccata 7758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 49 - 342
Target Start/End: Complemental strand, 51878479 - 51878191
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||||||| |||||||| ||||| | ||||||||||| ||||||| |||||||| |||| ||||| ||||||||||| |||  ||   ||||  ||||||    
T  51878479 tgcagtcagaaaattgattttttca-aaaagttatttagtttagttaatagtatgattgccgatgtcatgtcagctactgtactg---gtgggtcactct 51878384  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatt 247  Q
    | || |||||||||| ||||||||| |||||  || |||||||||||||| ||| |||||||||||||||| || |||||||||||||||| |||| |||    
T  51878383 aaaattaaactttaccttattacaattcagtactcatacaaaatattaagagaa-tttcaatcttagtgcataaatgagaatctatgtttaatttttatt 51878285  T
Q  248 taatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaa 342  Q
    ||||| | |||||| ||| |||||||||  ||||||| ||| |||||||||||||||  |||||| |||||||||| |||||| ||||| |||||    
T  51878284 taatcggagacacaattgcaataagtaacaatataataacacacattatggacaaatatgcaata-accatataatttgacgtaatatgtattaa 51878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 267 - 415
Target Start/End: Complemental strand, 4556696 - 4556543
Alignment:
Q  267 aataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatg----aattaaatacacaaatgctcaatgat 362  Q
    |||||||||| ||||||||||| ||||||||  |||||| ||||||| |||||||||||||||||| |||    |||||||||||||||| |||||||||    
T  4556696 aataagtaaagatataatgacacacattatgagcaaatgtgcaatacgccatataatctgacgtgacatgaattaattaaatacacaaatactcaatgat 4556597  T
Q  363 tgaccat-ttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||  |||  |||||| || |||||||||||| ||||||||||||||||||||||    
T  4556596 tggtcatagtaacttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 300 - 418
Target Start/End: Original strand, 18272154 - 18272271
Alignment:
Q  300 caaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatga 399  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||   | ||||| | | ||||||||||||||||||||    
T  18272154 caaatgtgcaatacaccatataatctgacttgatatgaattaaatacacaaatgttcaatgattg-ggagttaacgtcattagaaaagtcattctcatga 18272252  T
Q  400 cttcaccatagaattttcc 418  Q
    ||||||| || ||||||||    
T  18272253 cttcaccgtataattttcc 18272271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 421
Target Start/End: Original strand, 53811875 - 53812027
Alignment:
Q  269 taagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgacca 368  Q
    |||||||| ||||||||||| || ||||| ||||||| | |||||||||||||||||||||||| ||| |||||||||| ||||| ||    | ||||||    
T  53811875 taagtaaagatataatgacacaccttatgtacaaatgtggaatacaccatataatctgacgtgacatggattaaatacataaatgttc----actgacca 53811970  T
Q  369 t----ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    |    ||||||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  53811971 tagcattaacttcatcagaaaagtcattctcatgacttcaccgtagaattttccata 53812027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 31706497 - 31706612
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||| | |||| ||||| | ||| |||| ||||| ||||||||||    
T  31706497 gtgcagtcaaaaaactgacttttttgaaaaagttattttgtttaatcaatagtataatttttgatgtcatgttaactagtgtcctgttgatggaccactc 31706596  T
Q  148 tagaactaaactttac 163  Q
    ||  ||||||||||||    
T  31706597 taagactaaactttac 31706612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 48154364 - 48154513
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||| |||||| ||||||||||| |||| | ||||||||||  |||||| ||| ||||  ||||||||||||||| |||| |  || |||||||||     
T  48154364 gtgcagttaaaaaaatgacttttttaaaaaaatcattttgtttaaccaatagcatagttgttcatgccatgtcagctagtgtctttgtgatggaccactg 48154463  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| |||||||||||||||||||||| || ||||||| |||||    
T  48154464 taacactaaattttactttattacaaatcagtcctcatacaaaacattaa 48154513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 42664003 - 42664142
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| |||||||||   |||||||||||| |||||||||||||||| |||| |||| ||||||||||| |||| |  || |  |||||| ||      
T  42664003 agtcaagaaaatgactttttagaaaaagttattttatttagtcaatagtatagttgttgatgtcatgtcagctagtgtctttgtgataaaccactgtaag 42664102  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaa 191  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  42664103 actaaattttactttattacaaatcagtcctcgtacaaaa 42664142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 239 - 421
Target Start/End: Complemental strand, 42204523 - 42204339
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||||| || || ||| |||||||||| ||||| ||||| || |||||   ||||  |||||||||||||||||| || |||| ||  |    
T  42204523 attttgatttaatcagg-actcaattgcaataagtaaagatata-tgacacaccttatgagtaaatatgcaatacaccatataatccgatgtgacataga 42204426  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||||||||||||||| || |  |||    ||||||| |  |||||||||||||||| |||||||| |||||||||||||||    
T  42204425 ttaaatacacaaatgctcaataataggtcatatggttaacttcatcagaaaagtcattctcacgacttcacgatagaattttccata 42204339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 36689766 - 36689674
Alignment:
Q  105 ttgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||| |||| ||||||||||| |||| ||||| ||||||||  || ||||||||||||||||||||||||| |||| || |||||||||||||    
T  36689766 ttgttgatgtcatgtcagctagtgtcttgttgatggaccaccgtaaaactaaactttactttattacaaataagtcctcatacaaaatattaa 36689674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 29923046 - 29923191
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||| ||||| ||||   ||||||||| || | ||||||||||||||| | ||| |  || ||||||||| || |    
T  29923046 agtcaagaaaatgactttttttaaaaagtcattttatttaactaatagtatagttcttgatgccatgtcagctgacgtctttgtgatggaccactataaa 29923145  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| ||||||||||||||||| |||  | ||||||||||||||    
T  29923146 actaaattttactttattacaaataagttcttgtacaaaatattaa 29923191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 29972199 - 29972344
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||| ||||| ||||   ||||||||| || | ||||||||||||||| | ||| |  || ||||||||| || |    
T  29972199 agtcaagaaaatgactttttttaaaaagtcattttatttaactaatagtatagttcttgatgccatgtcagctgacgtctttgtgatggaccactataaa 29972298  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| ||||||||||||||||| |||  | ||||||||||||||    
T  29972299 actaaattttactttattacaaataagttcttgtacaaaatattaa 29972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 12121141 - 12121279
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    ||||||||||||||| |||||| |   |||||| ||||||| ||||  ||| ||||||||||||||||||||  || ||||| |||||| ||  ||||||    
T  12121141 aaaattgactttttt-gaaaaggttgattgttttgtcaataatatatctgttgatgccatgtcagctaatgttctgatggtgaaccactataagactaaa 12121239  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| ||||||||||| | || |  |||||||||||||    
T  12121240 ctttaccttattacaaataactccttatacaaaatattaa 12121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 394
Target Start/End: Complemental strand, 43485490 - 43485331
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||| |||||||||||||| || ||  |||||||||| ||||||||||| |  ||| || |||||  ||||| ||||||||||||||| |||  |||||    
T  43485490 attttaatttaatcagggactcaattacaataagtaaaaatataatgacacatcttaggggcaaatatgcaatgcaccatataatctgaagtggcatgaa 43485391  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattct 394  Q
    |||||||   ||||| ||||||||||  |||    ||||||| || ||||||||||||||    
T  43485390 ttaaatatgaaaatgttcaatgattggtcataggattaacttcaccagaaaagtcattct 43485331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 426
Target Start/End: Complemental strand, 4015488 - 4015443
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccatactttt 426  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4015488 agaaaagtcattctcatgacttcaccatagaattttccatattttt 4015443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 5125586 - 5125442
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||||||||| ||||  |||||  ||||||||  ||||||||||||||| |||| |  || ||||||||| ||      
T  5125586 agtcaagaaaatgacttttttgaaaaagttattttatttaaccaataacataattgttaatgccatgtcagctagtgtctttgtgatggaccactgtaag 5125487  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| | ||  |||||||||||||||| || |||||||||||||    
T  5125486 actaaa-tatatcttattacaaatcagtcctcttacaaaatattaa 5125442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 47871340 - 47871210
Alignment:
Q  67 ttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttacttt 166  Q
    ||||||||||| |||||||| ||||| ||||| ||||| ||| |||| ||||||| ||| |||| || ||  ||| |||||||  | ||||||||||  |    
T  47871340 ttttttagaaacgttattttatttagccaataatataactgttgatgtcatgtcaactagtgtcctgctgccggatcactctaagattaaactttacaat 47871241  T
Q  167 attacaaatcagtcatcgtacaaaatattaa 197  Q
     ||||||||||||| || || ||||||||||    
T  47871240 gttacaaatcagtcctcatataaaatattaa 47871210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 7327619 - 7327668
Alignment:
Q  369 tttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  7327619 tttaacttcactaaaaaagtcattctcataacttcaccatagaattttcc 7327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 11019844 - 11019700
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||||||| ||| ||||||  |||||| ||||| ||||| |||||| || |||||  |||  |||| ||||| |||| |  || ||||||||||||      
T  11019844 agtcaaaaaaatgatttttttgaaaaagtcattttatttagccaatagcatgattgtt-atgtaatgttagctagtgtctttgtgatggaccactctaag 11019746  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| ||||  |||||||||||||||| ||||| ||||||||||    
T  11019745 actaaattttatcttattacaaatcagtcctcgtataaaatattaa 11019700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 21193645 - 21193588
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccatactttta 427  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||||| || |||||    
T  21193645 ttaacttcaccagaaaagtcattctcatgactttaccatagaattttccttattttta 21193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 51213118 - 51213167
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||||||||||||||||||||||||||||||||    
T  51213118 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcca 51213167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 35844365 - 35844317
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||    
T  35844365 ttaacttcaccagaaaagtcattatcatgacttcaccatagaattttcc 35844317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 40552409 - 40552444
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||||||||||    
T  40552409 aaaagtcattctcatgacttcaccatagaattttcc 40552444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 1089769 - 1089720
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  1089769 ttaactttactagaaaaatcattatcat-acttcaccatagaattttccat 1089720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 46297899 - 46297945
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||    
T  46297899 ttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 11466852 - 11466815
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||||||| |||||||||||||||||||||    
T  11466852 agaaaagtcattctcaagacttcaccatagaattttcc 11466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 22450996 - 22450959
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22450996 agaaaaatcattctcatgacttcaccatagaattttcc 22450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 415
Target Start/End: Complemental strand, 32373511 - 32373466
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||    
T  32373511 ttaactttattggaaaagtcattctcatgacttcatcatagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 13498734 - 13498686
Alignment:
Q  34 tgagagcatctacagtgcagtcaaaaaattgacttttttagaaaagtta 82  Q
    ||||||| ||||||||| ||||| |||||||||||||||| ||||||||    
T  13498734 tgagagcttctacagtgtagtcagaaaattgacttttttaaaaaagtta 13498686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 47870370 - 47870291
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccata 319  Q
    ||||||||||||||| |||| || ||| |||| ||||| ||||||||||| || |||||| |||||| ||||| |||||||    
T  47870370 attttgatttaatcaaggactcaattgcaatacgtaaagatataatgacacaccttatgg-caaatgtgcaatgcaccata 47870291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 48354980 - 48354932
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| |||||||||||||||||||||||||||||||    
T  48354980 ttaacttcaccataaaaatcattctcatgacttcaccatagaattttcc 48354932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 52041060 - 52041108
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||||  ||||||||||    
T  52041060 ttaacttcaccagaaaagtcattctcatgacttcacctcagaattttcc 52041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 5124789 - 5124726
Alignment:
Q  301 aaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattg 364  Q
    ||||| |||||||||| |||||| |||| ||| ||  |||||||||||||||| ||||||||||    
T  5124789 aaatgtgcaatacaccgtataatttgacatgacatacattaaatacacaaatgttcaatgattg 5124726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 11835743 - 11835790
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||| || | |||| ||||||||||||||||||||||||||||||    
T  11835743 ttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 435362 - 435308
Alignment:
Q  65 acttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgt 119  Q
    |||||||| ||||||||||||||||||| |||||| |||  ||| ||||||||||    
T  435362 acttttttggaaaagttattttgtttagccaataggatagctgttgatgccatgt 435308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 18271880 - 18271918
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttatttt 86  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  18271880 gtgcagtcaagaaattgacttttttaaaaaagttatttt 18271918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 31706781 - 31706831
Alignment:
Q  185 tacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatg 235  Q
    ||||||||||||| || | |||||||| |||||||||| ||||||||||||    
T  31706781 tacaaaatattaaagggagtttcaatcgtagtgcacaaatgagaatctatg 31706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 43348315 - 43348281
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||| ||||||||||||||||||||||||||||||    
T  43348315 aaaaatcattctcatgacttcaccatagaattttc 43348281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || |||||| |||||||||||||||||||||| ||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 4557092 - 4556987
Alignment:
Q  75 aaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaa 174  Q
    |||||||||||||||| | | |||| |||||||| |||| |||||||| || | |  ||||| ||||||| | ||   ||||||||| | ||||||||||    
T  4557092 aaaagttattttgttttgcctataggataattgttgatgtcatgtcagttagtatactgttgatggaccattgtaagtctaaacttttccttattacaaa 4556993  T
Q  175 tcagtc 180  Q
    ||||||    
T  4556992 tcagtc 4556987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 415
Target Start/End: Original strand, 23165838 - 23165883
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||| |||| |||| ||||| ||||||||||||||||||||||    
T  23165838 ttaacttcactaaaaaaatcattatcatgacttcaccatagaattt 23165883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 419
Target Start/End: Complemental strand, 33698211 - 33698182
Alignment:
Q  390 attctcatgacttcaccatagaattttcca 419  Q
    ||||||||||||||||||||||||||||||    
T  33698211 attctcatgacttcaccatagaattttcca 33698182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 39282681 - 39282644
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  39282681 agaaaaatcattttcatgacttcaccatagaattttcc 39282644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 43976035 - 43976068
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||||||||||||||||||||| ||||||    
T  43976035 aaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 46297524 - 46297569
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagtta 82  Q
    |||| ||||| |||||||||||||| ||||||||||| ||||||||    
T  46297524 gagcttctacggtgcagtcaaaaaactgacttttttaaaaaagtta 46297569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 53175751 - 53175714
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  53175751 agaaaagtcattctcataacttcaccataaaattttcc 53175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 55343432 - 55343469
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| || ||||||||||||||||||||||    
T  55343432 agaaaagtcattttcgtgacttcaccatagaattttcc 55343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 26941397 - 26941445
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| ||||||| |||||||||||||||||||||||    
T  26941397 ttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttcc 26941445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 420
Target Start/End: Original strand, 27480534 - 27480566
Alignment:
Q  388 tcattctcatgacttcaccatagaattttccat 420  Q
    ||||||||||||||||| |||||||||||||||    
T  27480534 tcattctcatgacttcatcatagaattttccat 27480566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 419
Target Start/End: Complemental strand, 37157734 - 37157698
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  37157734 aaaagccattttcatgacttcaccatagaattttcca 37157698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 42 - 416
Target Start/End: Original strand, 2266527 - 2266902
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttag-aaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgg 140  Q
    ||||| ||||||||||||| |    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| || ||||||    
T  2266527 tctacggtgcagtcaaaaattaattttttttaggaaaagttattttgtttagccaatagtataactgtcgatgccatgtcagctagtgtcctgctggtgg 2266626  T
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta- 239  Q
    ||| ||||| || |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||||||     
T  2266627 acccctctaaaa-taaactttacattattacaaatcagtcctcatacaaaatattaagggaaatttcaatcttagtgcacaaatgggaatctatgtttaa 2266725  T
Q  240 ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaat 339  Q
    ||||||||||||||  | || ||||| |||||||||| ||||||||||| || |||| |||||||| | |||||||||| |||||| |||||  ||| ||    
T  2266726 ttttgatttaatcaaagtcatagttgcaataagtaaagatataatgacacaccttatagacaaatgtgtaatacaccatgtaatctaacgtggcatggat 2266825  T
Q  340 taaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  2266826 taaatacacaaatgctcaatgattgacgatttaacttcactagaaaagtcattatcatgacttcaccatataatttt 2266902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 49 - 415
Target Start/End: Complemental strand, 17612704 - 17612338
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactct 148  Q
    |||||||| |||||| | ||||||  |||||||||||| ||||| ||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||    
T  17612704 tgcagtcagaaaattcatttttttgaaaaagttattttatttagccaatagtataactgtcgatgtcatgtcagctagtgtcctgttggtggaccactct 17612605  T
Q  149 agaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatt 247  Q
    | ||||||| ||||| ||||||||||| |||| || || ||||||| ||||| ||||||||||||||  ||||| ||  ||||||||||| |||||||||    
T  17612604 aaaactaaattttaccttattacaaattagtcctcatagaaaatataaaggggaatttcaatcttagcacacaaatggcaatctatgtttaattttgatt 17612505  T
Q  248 taatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaataca 347  Q
    |||||  ||||| | ||| |||||||||| ||  ||||||| || |||| | |||||| | |||||| ||| ||||||| ||||| ||||||| ||||||    
T  17612504 taatctaggacataattgcaataagtaaagatgcaatgacacaccttattggcaaatgtgaaatacatcatttaatctggcgtgacatgaatt-aataca 17612406  T
Q  348 caaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    |||||||| |||||||||||||||||||| | || |||| ||||||||||||||||||||||||||||    
T  17612405 caaatgcttaatgattgaccatttaacttcattaaaaaaatcattctcatgacttcaccatagaattt 17612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 42 - 338
Target Start/End: Complemental strand, 2570855 - 2570558
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||||| |||| ||| |||||||||||||||||| ||||||| ||||| |||||||||||||| ||||| ||||| |||  || |||||||    
T  2570855 tctacggtgcagtcagaaaactgatttttttagaaaagttattatgtttagacaataatataattgtcgatgtcatgttagctagtgttctgctggtgga 2570756  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-t 240  Q
    |||||||| ||||||||||||| ||||||||||||| || ||  ||||||||||||||  ||||||||||||||||||||| ||  |||||||||||| |    
T  2570755 ccactctaaaactaaactttaccttattacaaatcattcctcaaacaaaatattaaggtgaatttcaatcttagtgcacaaatggaaatctatgtttact 2570656  T
Q  241 tttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||| ||||||||| ||| ||||| |||| ||||||||||| || |||| | |||||   ||||||||||||||||||||||||| |||||    
T  2570655 tttgatttaattagggacacaattgcaataaataaagatataatgacacactttatagccaaatatacaatacaccatataatctgacgtgacatgaa 2570558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 52 - 416
Target Start/End: Complemental strand, 9743954 - 9743590
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||||||||||||||||||  |||||||||||||||||  ||||| |||||||||| | | ||||| | ||| ||||    ||||||| ||||||| |    
T  9743954 agtcaaaaaattgacttttttgaaaaagttattttgtttaaccaataatataattgtcaacgtcatgttaactagtgtc---ctggtggatcactctaaa 9743858  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgaga--atctatgttt-attttgattt 248  Q
    |||||| ||||| |||||||||| ||||| || |||||||||||||||| ||  | ||||||||||||||| |||||  || ||||||| ||||||||||    
T  9743857 actaaattttacattattacaaaccagtcctcatacaaaatattaaggggaacataaatcttagtgcacaaatgagaatatatatgtttaattttgattt 9743758  T
Q  249 aatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacac 348  Q
    ||||| | ||| | ||| |||||||||| || |||||| | || ||||||| ||||| ||||||||||||||||| |||||| | ||| |||||||||||    
T  9743757 aatcaagaacataattgcaataagtaaagatttaatgaaacactttatggaaaaatgtgcaatacaccatataatatgacgttacatggattaaatacac 9743658  T
Q  349 aaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||| ||||| ||||  ||||||| || || | ||||||||||  |||||||| |||||||||||||    
T  9743657 aaatgttcaataattggtcatttaatttcaccaaaaaagtcatttacatgactttaccatagaatttt 9743590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 185 - 418
Target Start/End: Original strand, 54995613 - 54995847
Alignment:
Q  185 tacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagtaaatatataa 283  Q
    |||||||||||| ||| ||||||||||||||| ||||| | ||||||||| |||| |||||||||||||||||||||| ||| |||||||||| ||||||    
T  54995613 tacaaaatattagggggaatttcaatcttagtacacaaataagaatctatatttaattttgatttaatcagggacacaattgcaataagtaaagatataa 54995712  T
Q  284 tgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactaga 383  Q
     |||| |||||||||||||||| |||||||| ||||||| ||||| ||| ||| ||||||||| ||||||  ||||||||| ||||||||||| || | |    
T  54995713 agacacacattatggacaaatgtgcaatacatcatataacctgacatgacatggattaaatacgcaaatgtacaatgattggccatttaacttcaccaaa 54995812  T
Q  384 aaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||| ||||||||||| | |||||||||||    
T  54995813 aaagtcattatcatgacttcatcgtagaattttcc 54995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 95 - 288
Target Start/End: Complemental strand, 2708196 - 2708003
Alignment:
Q  95 aatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatat 194  Q
    ||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||| |||||| |||||  |||||||||||||| | || |||||||||     
T  2708196 aatagtataattgccgatatcatgtcagctagtgtcatgttggtggaccactctaaaactaagctttatcttattacaaatcagccctcatacaaaata- 2708098  T
Q  195 taagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacacagttggaataagtaaatatataatgaca 288  Q
     ||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| || ||| |||||||||| |||||||||||    
T  2708097 gaaggggaatttcaatcttagtgcacaaatgagaatccatgtttaattttgatttaatcagggactcaattgcaataagtaaagatataatgaca 2708003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 195 - 375
Target Start/End: Complemental strand, 1012521 - 1012339
Alignment:
Q  195 taagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacag-ttggaataagtaaatatataatgacataca 292  Q
    |||||| ||||||||| ||||||||||| |  ||||||||||||| ||||||||||||||||||||||  ||| |||||||||| ||||||||||| ||     
T  1012521 taaggggaatttcaattttagtgcacaaataggaatctatgtttaattttgatttaatcagggacacaaattgcaataagtaaagatataatgacacacc 1012422  T
Q  293 ttatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaact 375  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||| |||||||||||    
T  1012421 ttatgggcaaatgtgcaatacaccatataatctgacgtgacatggattaaatacacaaatactcgatgattaaccatttaact 1012339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 49879006 - 49878858
Alignment:
Q  87 gtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgta 186  Q
    |||||||||||  ||||||||| |||| ||||||| ||| |||| || |||||||||| ||||  |||||||||||| |||||| |||||||||||| ||    
T  49879006 gtttagtcaatgatataattgttgatgtcatgtcaactagtgtc-tgctggtggaccattctaagactaaactttaccttattataaatcagtcatcata 49878908  T
Q  187 caaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||| |||||    
T  49878907 caaaatattaagggaaatttcaatcttaatgcacaaatgaaaatttatgt 49878858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 278 - 416
Target Start/End: Original strand, 20097395 - 20097537
Alignment:
Q  278 atataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat----ttaa 373  Q
    ||||||||||| |  |||| |||||||  ||||||||| |||||||||||||||  |||||||||||||||||||||  ||||||||| |||    ||||    
T  20097395 atataatgacacatcttatagacaaatatgcaatacactatataatctgacgtggcatgaattaaatacacaaatgcggaatgattgatcatagggttaa 20097494  T
Q  374 ctttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||| || ||||||||||||||||||||||||||||||||||||    
T  20097495 cttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 300 - 418
Target Start/End: Complemental strand, 2704628 - 2704512
Alignment:
Q  300 caaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatga 399  Q
    |||||| |||||||||||||||||  |||||||  ||||||||||||||||||  ||||||||||| |||||||||| || |||||||||||| ||||||    
T  2704628 caaatgtgcaatacaccatataat--gacgtgacgtgaattaaatacacaaatattcaatgattgatcatttaacttcaccagaaaagtcattttcatga 2704531  T
Q  400 cttcaccatagaattttcc 418  Q
    |||||||||| ||||||||    
T  2704530 cttcaccataaaattttcc 2704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 420
Target Start/End: Original strand, 33036071 - 33036255
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    |||||||||||||||| ||| || ||| |||||||||| ||||||||||| || |||| | |||||| ||||||||| ||||||||| |||| | ||| |    
T  33036071 attttgatttaatcagagactcaattgcaataagtaaagatataatgacaaaccttataggcaaatgtgcaatacacaatataatctaacgtaacatgga 33036170  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||  |||||||||||||||| |||    ||||| | | ||||||||| ||| | ||||||| |||||||||||||||||    
T  33036171 ttaaataca-gaatgctcaatgattgatcataaagttaacataaatagaaaagtaattgtgatgactttaccatagaattttccat 33036255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 417
Target Start/End: Complemental strand, 51204723 - 51204580
Alignment:
Q  278 atataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat----ttaa 373  Q
    ||||||||||| || ||||   |||||| ||||| ||||||||||||||| |||| ||| |||||||||||||| ||||||| ||||| |||    ||||    
T  51204723 atataatgacacaccttattagcaaatgtgcaatgcaccatataatctgatgtgacatggattaaatacacaaaagctcaataattgatcatagggttaa 51204624  T
Q  374 ctttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||| || |||||||||||| | ||||||||||||||||||||||    
T  51204623 cttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 5914947 - 5915096
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||  |||||| | | ||||  || |||||||||||| |||| |  || |||||||||     
T  5914947 gtgcagtcaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcaaagttgttcataccatgtcagctagtgtctttgtgatggaccactg 5915046  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| ||||||||||||||||| |||| || || ||||||||||    
T  5915047 taacactaaattttactttattacaaattagtcctcataaaaaatattaa 5915096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 2708272 - 2708202
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattg 107  Q
    |||| ||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2708272 gagcttctacggtgaagtcagaaaattgacttttttaaaaaagttattttgtttagtcaatagtataattg 2708202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 14246559 - 14246414
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||| ||||| ||||| |||||| |||||| |  |||||||||||||| ||||| |  || ||||||||| ||      
T  14246559 agtcaagaaaatgacttttttgaaaaagtcattttatttagccaatagcataattcttaatgccatgtcagctgatgtctttgtgatggaccactataag 14246460  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||| ||||||||||||||||| |||| | | ||||||||||||    
T  14246459 actaaattttactttattacaaataagtccttgaacaaaatattaa 14246414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 55241267 - 55241317
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55241267 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttccat 55241317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 22721943 - 22722026
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccact 146  Q
    |||||||||| ||||||| ||||||||||| |||| | |||| ||| |||||||||||||||| |||| ||||| |||||||||    
T  22721943 tgacttttttggaaaagtcattttgtttagccaatggaataaatgttgatgccatgtcagctagtgtcttgttgatggaccact 22722026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 51959989 - 51959922
Alignment:
Q  278 atataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaata 345  Q
    ||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||||    
T  51959989 atataatgacacactttatgggcaaatgtgcaatacaccatataatctgacgtgatatagattaaata 51959922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 38812260 - 38812308
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 38812308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 420
Target Start/End: Original strand, 28003160 - 28003199
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28003160 agaaaagtcattctcatgacttcaccatagaattttccat 28003199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 28292361 - 28292428
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataa 104  Q
    |||| |||||||||||||||| ||  ||||||||||| |||||||||||| ||||| |||||||||||    
T  28292361 gagcttctacagtgcagtcaagaacctgacttttttaaaaaagttattttatttagccaatagtataa 28292428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 38811861 - 38811810
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttccata 38811810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 27396664 - 27396618
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||    
T  27396664 ttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 33255570 - 33255496
Alignment:
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||||||| |||| ||||||||||| || | |||||| |||||| ||||||||||||| |||||| ||||    
T  33255570 acaaatgctcaataattggccatttaacttcaccaaaaaagtgattctcgtgacttcaccatataatttttcata 33255496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 51960066 - 51960017
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgttta 91  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  51960066 tctacagtgcagtcagaaaattgatttttttggaaaagttattttgttta 51960017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 54995007 - 54995068
Alignment:
Q  132 tgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaata 193  Q
    ||||||| |||||||||| ||||||  |||||||||||||||||||||| || |||||||||    
T  54995007 tgttggtcgaccactctaaaactaacttttactttattacaaatcagtcctcatacaaaata 54995068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 7152269 - 7152317
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  7152269 ttaactttaccagaaaagtcattagcatgacttcaccatagaattttcc 7152317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 363
Target Start/End: Original strand, 22756801 - 22756924
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||| ||||||| || || |||||||||||||| ||||| || ||  |  ||||  |||||| |||||||||| |||||| ||| |||  ||| |    
T  22756801 attttgattcaatcagg-acgcaattggaataagtaaagatatagtggcacgctgtatgagcaaatgtgcaatacaccgtataatttgatgtggcatgca 22756899  T
Q  339 ttaaatacacaaatgctcaatgatt 363  Q
    |||||||||||||| ||||||||||    
T  22756900 ttaaatacacaaatactcaatgatt 22756924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 35021198 - 35021246
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||    
T  35021198 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 35021246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 17513043 - 17513126
Alignment:
Q  267 aataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    ||||| |||| ||||||||||| |||||||   || ||| |||| |||| ||||||||||||| || |||||||||||||||||    
T  17513043 aataaataaagatataatgacacacattatatgcagatgtgcaacacactatataatctgacgcgacatgaattaaatacacaa 17513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 419
Target Start/End: Original strand, 28293130 - 28293286
Alignment:
Q  267 aataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgac 366  Q
    |||||||||| ||||||| ||| |  |||| |  ||||| |||||||| |||||||| ||| ||   ||| ||||||||||   || |||||||||||||    
T  28293130 aataagtaaagatataataacacatcttataggtaaatgtgcaatacatcatataatttgatgtagcatggattaaatacattgatactcaatgattgac 28293229  T
Q  367 cat----ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||    ||||||| ||   |||||||||||||||||||||| | ||||||||||||    
T  28293230 catatggttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattttcca 28293286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 39397966 - 39397916
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || | |||||||||||| |||||||||||||||||||||||||    
T  39397966 ttaacttcaccataaaagtcattctaatgacttcaccatagaattttccat 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 47253797 - 47253751
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||    
T  47253797 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 7703565 - 7703516
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||||||||||||||||||| | ||||||||||||||    
T  7703565 ttaacttcaccagaaaagtcattctcatgactttaacatagaattttcca 7703516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 352
Target Start/End: Complemental strand, 22729889 - 22729777
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||| ||||||| ||||||||| ||||||| || ||||| || || ||  ||||  |||||| |||||||||| |||||| ||| |||  ||| |    
T  22729889 attttgattcaatcagg-acacagttgcaataagttaagatatagtggcacaccatatgagcaaatgtgcaatacaccgtataatttgatgtggcatgca 22729791  T
Q  339 ttaaatacacaaat 352  Q
    ||||||||||||||    
T  22729790 ttaaatacacaaat 22729777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 34948271 - 34948312
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccatac 422  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  34948271 agaaaagtcattctcatgacttcaccataaaattttacatac 34948312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 38011891 - 38011854
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38011891 agaaaagtcattctcatgatttcaccatagaattttcc 38011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 49376001 - 49375964
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||||||||||||||||| |||||||||||||    
T  49376001 aaaagtcattctcatgacttcaccgtagaattttccat 49375964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 17272059 - 17272011
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||| || |||||||||||||||||||||    
T  17272059 ttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcc 17272011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 25184145 - 25184113
Alignment:
Q  386 agtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||||||||||||||||||||||||    
T  25184145 agtcattctcatgacttcaccatagaattttcc 25184113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 25701220 - 25701268
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||    
T  25701220 ttaactttaccaaaaaagtcattatcatgacttcaccataaaattttcc 25701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 28292430 - 28292486
Alignment:
Q  141 accactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    |||||||||  |||||||||||| ||||||||||||| | ||| |||||||||||||    
T  28292430 accactctaagactaaactttaccttattacaaatcaataatcatacaaaatattaa 28292486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 29584361 - 29584409
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||| || |||||||||||||||||||||    
T  29584361 ttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcc 29584409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 32912743 - 32912791
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| |||||||||||||||||||||||    
T  32912743 ttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 32912791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 34361654 - 34361702
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| |||||||||||||||||||||||    
T  34361654 ttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 34361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 55478058 - 55478106
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| |||||||||||||||||||||||||||||||    
T  55478058 ttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 55478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 4598041 - 4597994
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    ||||||| || |||||||||||||| |||||||||||||| |||||||    
T  4598041 ttaacttcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 9409594 - 9409539
Alignment:
Q  49 tgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataa 104  Q
    |||||||| |||| ||||||||||  || |||||||||| ||||||||||||||||    
T  9409594 tgcagtcagaaaactgacttttttgaaagagttattttgattagtcaatagtataa 9409539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 19440824 - 19440863
Alignment:
Q  383 aaaagtcattctcatgactt-caccatagaattttccata 421  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19440824 aaaagtcattctcatgactttcaccatagaattttccata 19440863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Complemental strand, 37287768 - 37287733
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37287768 aaaagtcattctcattacttcaccatagaattttcc 37287733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 418
Target Start/End: Original strand, 37663915 - 37663950
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| |||||||||||||||||||||||    
T  37663915 aaaagtcattcttatgacttcaccatagaattttcc 37663950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 47237041 - 47236934
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    |||| ||||||||||||  | || ||| |||||||||| || |||||||| |||| ||||  ||||  |||| |||||||||||| |||||||  ||| |    
T  47237041 atttcgatttaatcaggtgcgcaattgcaataagtaaaaatctaatgacacacatcatgggtaaatctgcaaaacaccatataatttgacgtgtaatgga 47236942  T
Q  339 ttaaatac 346  Q
    ||||||||    
T  47236941 ttaaatac 47236934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 52516645 - 52516599
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || | ||||||||||||||||||||||||||| ||||||    
T  52516645 ttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 53337576 - 53337626
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||  |||||| ||||| ||||||||| |||||||||||||||||    
T  53337576 ttaactttatcagaaaaatcattatcatgactttaccatagaattttccat 53337626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 4205153 - 4205116
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| || ||||||||||||||||||||||    
T  4205153 agaaaagtcattttcctgacttcaccatagaattttcc 4205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 4396374 - 4396326
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| |||| |||||||||| | |||||||||| ||||||||||||    
T  4396374 ttaacttcactaaaaaagtcatttttatgacttcactatagaattttcc 4396326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 9139295 - 9139247
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||| | |||||||||||||||||||||||||    
T  9139295 ttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttcc 9139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 47073657 - 47073705
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||| ||||||||| |||||||||||||||    
T  47073657 ttaacttcaccaaaaaagtcattatcatgactttaccatagaattttcc 47073705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 52 - 427
Target Start/End: Original strand, 4108596 - 4108969
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| |||||||| || |  ||||||||||| |||||||||||||||||||| || |    
T  4108596 agtcaaaaaattgacttttttgaaaaagttattttgtttagtcaataatataattgccgttatcatgtcagctagtgtcatgttggtggaccactttaaa 4108695  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaa 250  Q
    ||||| |||||  |||||||||| ||||| || ||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  4108696 actaagctttatcttattacaaaacagtcttcatacaaaata-taaggggaatttcaattttagtgcacaaatgagaatctatgtttaattttgatttaa 4108794  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    ||||||||||| ||| |||||||||| |||||| |||| || |||||| |||||| ||||||||||||||||  |||||||  || ||||||||||||||    
T  4108795 tcagggacacaattgcaataagtaaagatataacgacacaccttatgggcaaatgtgcaatacaccatataa--tgacgtggcattaattaaatacacaa 4108892  T
Q  351 atgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccatactttta 427  Q
    ||  ||||||||||  ||||||||||||| | |||||||||| |||||||||||||||| |||||||| | ||||||    
T  4108893 atattcaatgattggtcatttaactttaccaaaaaagtcattttcatgacttcaccataaaattttcctttctttta 4108969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 44 - 362
Target Start/End: Complemental strand, 3038780 - 3038462
Alignment:
Q  44 tacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggacc 143  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||||| |||||  |||| ||||||| | | |||| || |||||||||    
T  3038780 tacagtgcagtcagaaaattgacttttttaaaaaaattattttgtttagccaatagtagaattgctgatgtcatgtcaacaagtgtcttgctggtggacc 3038681  T
Q  144 actctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attt 242  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| || || ||||||| |||| ||||    
T  3038680 actctaaaactaaactttaccttattacaaatcaatcatcatacaaaatattaaggg-aatttcaatcttagtgcataaatgggaatctaagtttaattt 3038582  T
Q  243 tgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaa 342  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||| ||| |||||||||  ||||||||||||||| || ||||||    
T  3038581 tgatttaatcagggacacaattgcaataagtaaagatataatgacacaccttatggacagatgtgcaatacactgtataatctgacgtgacataaattaa 3038482  T
Q  343 atacacaaatgctcaatgat 362  Q
    ||| ||||||||||||||||    
T  3038481 atagacaaatgctcaatgat 3038462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 42 - 418
Target Start/End: Complemental strand, 7291096 - 7290720
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||| | |||||| ||||||||  |||| ||||||||||||| ||||||||||| |||||||| ||| ||| ||| |||| |||| ||| |    
T  7291096 tctacggtgcagttagaaaattaacttttttgaaaaaattattttgtttaggcaatagtataactgtcgatgtcatatcaactagtgtcctgtttgtgaa 7290997  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt-ttat 240  Q
    |||||||| ||||||||||||  ||||||||||||| || || |||||||||||||| | ||||||||||||||||||||| ||| ||||||||| | ||    
T  7290996 ccactctaaaactaaactttatcttattacaaatcaatcctcatacaaaatattaagaggaatttcaatcttagtgcacaaatgaaaatctatgtctaat 7290897  T
Q  241 tttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaatt 340  Q
    ||||||||||||||| | ||| ||| |||||||||| ||||||| | | |  ||||||  |||||   ||||| |||||||||||||||||| |||||||    
T  7290896 tttgatttaatcaggaatacaattgcaataagtaaagatataataatacatcttatgggaaaatgtctaatacgccatataatctgacgtgacatgaatt 7290797  T
Q  341 aaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||  |||||||| ||||||||| |||||||||| | || |||||| |||||  ||||||||||||||||||||||||    
T  7290796 aaacgcacaaatgatcaatgattcaccatttaacgtcaccagaaaa-tcatttgcatgacttcaccatagaattttcc 7290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 58 - 421
Target Start/End: Original strand, 23176474 - 23176814
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||  ||||  ||||||||||| |||||||||| |||||||||||| ||||||     
T  23176474 aaaattgacttttttgaaaaagttattttgtttattcaatagtataatttccgatatcatgtcagctagtgtcatgttgatggaccactctaaaactaag 23176573  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcaggg 256  Q
    |||||  ||||||||||| |||| || |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  23176574 ctttatcttattacaaattagtcctcatacaaaatat-aaggggaatttcaatcttagtgcacaaatgagaatctatgtttaattttgatttaatcaggg 23176672  T
Q  257 acacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctc 356  Q
    ||||| ||| ||||||                     ||||| || ||  |||||||||||||||||  ||||||| ||| ||||| |||||||||  ||    
T  23176673 acacaattgcaataag---------------------tatgggcagatttgcaatacaccatataat--gacgtgacatgcattaagtacacaaatattc 23176749  T
Q  357 aatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||  |||||||||| || | |||||||||| ||||||||||||||||||| ||| ||||    
T  23176750 aatgattggtcatttaacttcaccaaaaaagtcattttcatgacttcaccatagaaattttcata 23176814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 416
Target Start/End: Original strand, 18756344 - 18756704
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||||| |||||||| |||||   |||||||||||||||||| ||||| |||||||| |||||  |||| |||||||||| |  |||||||||||||    
T  18756344 gtgcagtcagaaaattgattttttggaaaaagttattttgtttagccaataatataattgccgatgttatgttagctaatgtcctactggtggaccactc 18756443  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgat 246  Q
    || |||||| |||||| |||||||||||| ||| || |||||||||||||||| ||||  |||||||||||||||  | |||| |||| ||| |||| ||    
T  18756444 taaaactaatctttaccttattacaaatctgtcctcatacaaaatattaaggggaattaaaatcttagtgcacaaaggggaatatatgcttacttttaat 18756543  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    | ||||| ||||||| ||| |||||||||| ||||||||||| |  |||| |||||||| |||||| |||||||||| |||||||  ||| ||||||||     
T  18756544 tgaatcatggacacaattgcaataagtaaagatataatgacacatcttatagacaaatgtgcaatagaccatataatttgacgtg-catggattaaata- 18756641  T
Q  347 acaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
           |||||||||| |||||||||||| | || |||| | ||| |||| | ||||||||||||||||    
T  18756642 -------ctcaatgattaaccatttaacttcagtaaaaaaataattttcataatttcaccatagaatttt 18756704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 151 - 419
Target Start/End: Original strand, 6267285 - 6267550
Alignment:
Q  151 aactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgattta 249  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  6267285 aactaaactttatcttattacaaatcagtcatcatacaaaatattaaggggaatttcaatcttagtgcacaaatgcaaatctatgtttaattttgattta 6267384  T
Q  250 atcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacaca 349  Q
    |||| ||||| | ||| |||||||||| ||||||| ||| || |||| || |||||   ||||||||| |||| ||||||||  |||| |||||||||||    
T  6267385 atcaaggacataattgcaataagtaaagatataataacacaccttatagataaatgtataatacaccaaataacctgacgtggcatgacttaaatacaca 6267484  T
Q  350 aatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||| |||   | ||||||||||||||||||   ||||| |||| |||| | ||||||||| |||||||||    
T  6267485 aatactc---ggttgaccatttaactttac-ctaaaagacattttcattatttcaccataaaattttcca 6267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 237
Target Start/End: Original strand, 28220714 - 28220898
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| ||| ||||| |||||  ||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||| |    
T  28220714 agtcagaaatttgacatttttgaaaaagttattttgtttagtcaatagtataattgtcgatatcatgtttgctaatgtcatgttggtggaccactctaaa 28220813  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtt 237  Q
    ||||| |||||  |||||||||||||||| || ||||||||| |||||| |||||||||||||||| ||||  |||||||||||||    
T  28220814 actaagctttatcttattacaaatcagtcctcatacaaaata-taaggggaatttcaatcttagtgtacaaaagagaatctatgtt 28220898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 34686131 - 34685958
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaacttta 162  Q
    |||||||||| ||||||||||||| |||||| |||||||||| |||  ||| |||||||   | |||| ||  ||| ||||||||||  |||||||||||    
T  34686131 tgacttttttggaaaagttattttttttagttaatagtataactgttaatgtcatgtcaagcagtgtcctgccggtagaccactctaagactaaacttta 34686032  T
Q  163 ctttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  34686031 ctttattacaaatcagtcctcatacaaaatattaagggaaatttcagtcttagtgcacaaatgagaatatatgt 34685958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 30650901 - 30651108
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgc--------catgtcagctaatg 128  Q
    |||| ||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||| ||| || |         ||||||| | | ||    
T  30650901 gagcttctacggtgcagtcaagaaattgacttttttgaaaaagttattttgtttagtcaattgtataagtgttgaggggacttctacatgtcaaccagtg 30651000  T
Q  129 tcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgaga 228  Q
    |  || |||||||||||||||  | |||||||||| ||||||||||||||||||| ||| |||||||||| | ||||| ||||||||||||||| ||| |    
T  30651001 ttctgctggtggaccactctaagattaaactttaccttattacaaatcagtcatcatactaaatattaagaggaattttaatcttagtgcacaaatgaaa 30651100  T
Q  229 atctatgt 236  Q
    ||||||||    
T  30651101 atctatgt 30651108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 416
Target Start/End: Original strand, 35735850 - 35736030
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||| ||||||||||| ||||| ||| |||| ||||| ||||| || || || |||||  |||||| ||||||||||||||||| | ||| || |   |    
T  35735850 atttttatttaatcagg-acacaattgtaataggtaaagatatagtggcacaccttatgagcaaatgtgcaatacaccatataatttaacgggacacaca 35735948  T
Q  339 ttaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||||||||||||||||||||   | |    ||||||| || | |||||||||||| |||||||||||||||||||||    
T  35735949 ttaaatacacaaatgctcaatgattcgtcgtatgattaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 418
Target Start/End: Original strand, 1879095 - 1879278
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||| ||||||| ||| |||||||||| ||||| ||  | ||| |||| |||||||  ||||||||  |||||| ||| |||| ||  |    
T  1879095 attttgatttaatcaaggacacatttgcaataagtaaaaatatagtggtacacaatatgaacaaatgtacaatacacactataatttgatgtgacattca 1879194  T
Q  339 ttaaatacacaaatgctcaatgattgaccatt----taactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||   |||||||  ||||    | |||| || | |||||||||||| |  ||||||||||||||||||||    
T  1879195 ttaaatacacaaatgcattatgattggtcattctaatgacttcaccaaaaaagtcattctaacaacttcaccatagaattttcc 1879278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 418
Target Start/End: Complemental strand, 34463567 - 34463416
Alignment:
Q  267 aataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgat--tg 364  Q
    |||||||||| ||||||||||| ||  ||||  |||| | ||||||||| ||||||| ||| ||| |||| |||||||||| ||||  ||||||||  ||    
T  34463567 aataagtaaagatataatgacacaccatatgttcaaacgtgcaatacacaatataatgtgaagtggtatggattaaatacataaattttcaatgatcatg 34463468  T
Q  365 accatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||   |||||||||  ||||||| ||||||||||||||||| ||  ||||||||    
T  34463467 ac--attaactttatcagaaaagacattctcatgacttcacaatgaaattttcc 34463416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 35459841 - 35459888
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  35459841 ttaactttacgaaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 418
Target Start/End: Original strand, 1835254 - 1835437
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
    ||||||||||||||| ||||||| |||  ||||||||| ||||| ||  | ||| |||| |||||||  ||||||||  |||||| ||| |||| ||  |    
T  1835254 attttgatttaatcaaggacacatttgcgataagtaaaaatatagtggtacacaatatgaacaaatgtacaatacacactataatttgatgtgacattca 1835353  T
Q  339 ttaaatacacaaatgctcaatgattgaccatt----taactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||   |||||||  ||||    | |||| || | |||||||||||| |  ||||||||||||||||||||    
T  1835354 ttaaatacacaaatgcattatgattggtcattctaatgacttcaccaaaaaagtcattctaacaacttcaccatagaattttcc 1835437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 1872594 - 1872738
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    |||||| ||| ||||||||||  |||||| |||||||| || || ||  ||| |||| ||||||||||||||||||||| |  || |||| || | || |    
T  1872594 agtcaagaaaatgacttttttgaaaaagtcattttgttcagccattaacatagttgttgatgccatgtcagctaatgtctttgtgatgga-cattgtaaa 1872692  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    || ||| |||||||||||| ||||||||| |  |||||||||||||    
T  1872693 accaaattttactttattataaatcagtccttatacaaaatattaa 1872738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 5300089 - 5300138
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||||    
T  5300089 ttaacttcattaaaaaagtcattctcatgacttcaccatagaattttcca 5300138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 7998399 - 7998362
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7998399 agaaaagtcattctcatgacttcaccatagaattttcc 7998362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 13307670 - 13307621
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  13307670 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcca 13307621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 39099263 - 39099300
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39099263 agaaaagtcattctcatgacttcaccatagaattttcc 39099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 16447018 - 16447066
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||    
T  16447018 ttaactttatcagaaaagtcattttcatgacttcaccatagaattttcc 16447066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 415
Target Start/End: Complemental strand, 5018060 - 5018013
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  5018060 atttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 5018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Original strand, 28220940 - 28221003
Alignment:
Q  355 tcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||  |||||||||| || |||||||||||| ||||||||| | |||||||||||||    
T  28220940 tcaatgattggtcatttaacttcaccagaaaagtcattttcatgactttatcatagaattttcc 28221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 7891091 - 7891137
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||    
T  7891091 ttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 10555345 - 10555394
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||||||||||||||||||| ||||||||||||    
T  10555345 ttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttcca 10555394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 15009289 - 15009240
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||||||| ||||||||||||||||||||||||    
T  15009289 ttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcca 15009240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 34895003 - 34894966
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34895003 agaaaagtcattttcatgacttcaccatagaattttcc 34894966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 1150248 - 1150296
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| |||||||||||||||||||||||    
T  1150248 ttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 1150296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 1204974 - 1204926
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||||||||||||||||| || ||||||||    
T  1204974 ttaacttcaccagaaaagtcattctcatgacttcaccgtaaaattttcc 1204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 27082981 - 27083029
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||| ||| |||||||||||||||||||||||    
T  27082981 ttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttcc 27083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 33906260 - 33906220
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  33906260 agaaaagtcattctcataatttcaccatagaattttccata 33906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 38644025 - 38643977
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||||||||| ||||||||||||||||||    
T  38644025 ttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttcc 38643977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 418
Target Start/End: Original strand, 43643754 - 43643786
Alignment:
Q  386 agtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||||||||||||||||||||||||    
T  43643754 agtcattctcatgacttcaccatagaattttcc 43643786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 416
Target Start/End: Original strand, 6446717 - 6446752
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||||||| |||||||||||||||||||||||    
T  6446717 agaaaagtcattatcatgacttcaccatagaatttt 6446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 23854574 - 23854625
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||| || | |||||||||||||||||||||||| |||| |||||||||    
T  23854574 ttaacttcaccaaaaaagtcattctcatgacttcaccgtagacttttccata 23854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Original strand, 1954108 - 1954146
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  1954108 agaaaagtcattatcataacttcaccatagaattttcca 1954146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 6098661 - 6098711
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || | |||||| ||| |||||||||||||||||||||||||||    
T  6098661 ttaacttcaccaaaaaagttattttcatgacttcaccatagaattttccat 6098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 6446183 - 6446245
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataa 104  Q
    ||||| |||||||||| ||| ||||||||||| ||||||| |||| ||||| |||||| ||||    
T  6446183 tctacggtgcagtcaagaaactgacttttttaaaaaagttgttttttttagccaatagaataa 6446245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 33197928 - 33197890
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  33197928 agaaaaattattctcatgacttcaccatagaattttcca 33197890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 412
Target Start/End: Original strand, 37970662 - 37970704
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaa 412  Q
    ||||||| || | ||||||||||||||||||||||||||||||    
T  37970662 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 16222899 - 16222862
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  16222899 agaaaagtcattctcatgatttcaccgtagaattttcc 16222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 36695120 - 36695157
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| || ||||||||||||||||||||||    
T  36695120 agaaaagtcattttcctgacttcaccatagaattttcc 36695157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 41362565 - 41362508
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccatactttta 427  Q
    ||||||| || | |||||||||| |||| ||||||||||||||||||||  |||||||    
T  41362565 ttaacttcaccaaaaaagtcattttcataacttcaccatagaattttcccaactttta 41362508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 63 - 418
Target Start/End: Original strand, 13876611 - 13876967
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaacttta 162  Q
    ||||||||||| ||||||||||||||||||  ||  |||||| |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  13876611 tgacttttttacaaaagttattttgtttagcgaacggtataactgtcgatgtcatgtcagctagtgtcatgctggtggaccactctaaaactaaacttta 13876710  T
Q  163 ctttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacaca 261  Q
    | |||||||||||| ||  || |||||||||||||||| ||||||||| ||||||||||| || |||||||||||| ||||||||||||||| ||| |||    
T  13876711 ccttattacaaatcggtactcatacaaaatattaaggggaatttcaatattagtgcacaaatgggaatctatgtttaattttgatttaatcaaggataca 13876810  T
Q  262 gttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatga 361  Q
     ||| ||||| |||| ||||||||||| || |||||| |||||| | |||||||||||| || |||||||  ||  ||||||||||||||| ||||||||    
T  13876811 attgcaataactaaaaatataatgacacactttatgggcaaatgtgtaatacaccatatgatatgacgtggcattgattaaatacacaaatactcaatga 13876910  T
Q  362 ttgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||| |||||||||| || | |||||||||| |||| ||||||||||||||||||||    
T  13876911 ttgatcatttaacttcaccataaaagtcattttcataacttcaccatagaattttcc 13876967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 52 - 402
Target Start/End: Complemental strand, 16127883 - 16127536
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||  ||||||| || |||| ||  ||||||| ||| || |    
T  16127883 agtcagaaaattgactttttta-aaaagttattttatttagtcaatagtattactgtcgatgttatgtcagttagtgtcctgcaggtggactactttaaa 16127785  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgtttattttgatttaat 251  Q
    |||||||||||| |||||||||| ||||| || |  ||||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||| |    
T  16127784 actaaactttaccttattacaaaccagtcctcatttaaaatattaaggggaatctcaatcttagtgcacaaatgagaatctatgtttaatttgatttatt 16127685  T
Q  252 cagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaa 351  Q
    |||||  ||| ||| |||||||||| ||||||||||| || |||||   ||||| |||||||| ||||||||||||||||  ||| ||||||||||||||    
T  16127684 caggg--acaattgcaataagtaaacatataatgacacaccttatgagtaaatgtgcaatacatcatataatctgacgtgtcatggattaaatacacaaa 16127587  T
Q  352 tgctcaatgattgaccatttaactttactagaaaagtcattctcatgactt 402  Q
    || |||||||||||||||||||||| || |||||||||||| |||||||||    
T  16127586 tgatcaatgattgaccatttaacttcaccagaaaagtcattttcatgactt 16127536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 78 - 419
Target Start/End: Complemental strand, 27118671 - 27118329
Alignment:
Q  78 agttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatca 177  Q
    ||||||| ||||||||||||| ||||| | || ||| || ||||||||   || || ||||||| ||||||| ||||| ||||||| |||||||||||||    
T  27118671 agttattgtgtttagtcaataatataactatcaatgtcacgtcagctaggatcctgctggtggatcactctaaaactatactttaccttattacaaatca 27118572  T
Q  178 gtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagtaaa 276  Q
    |||||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  27118571 gtcatcatacaaaatattaaggggaatttcaatcttagtgcacgaatgagaatctatgtttaattttgatttaatcagggacacaattgcaataagtaaa 27118472  T
Q  277 tatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactt 376  Q
     ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||  ||| |||||||||| |||||||| |||||| || |||||||||    
T  27118471 gatataatgacacaccttatgaacaaatgtgcaatacatcatataatatgacgtggcatggattaaatacataaatgctccatgattaactatttaactt 27118372  T
Q  377 tactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||  | |||||||||| ||||||||| | |||| |||||||||    
T  27118371 tatcaaaaaagtcattttcatgactttatcataaaattttcca 27118329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 67 - 419
Target Start/End: Complemental strand, 15964452 - 15964101
Alignment:
Q  67 ttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttacttt 166  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||| |||| |  |  || ||||||||| ||||||| ||||| ||    
T  15964452 ttttttagaaaaattattttgtttagccaatagtataactgtcgatgtcatgtcagctagtgtcctactaatgtaccactctaaaactaaattttacctt 15964353  T
Q  167 attacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttg 265  Q
    |||||||||||||| || || ||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||| |||    
T  15964352 attacaaatcagtcctcatataaaatattaaggggaatttcaatcttagtgcacaaatgtgaatctatgtttaattttgatttaatcagggacacaattg 15964253  T
Q  266 gaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattga 365  Q
      || ||||| |||||||||||| |  ||||||||||||| ||||||||| ||||||| |||||||| ||  |||||||||||||||||| ||||||||     
T  15964252 atatcagtaagtatataatgacacatcttatggacaaatgtgcaatacactatataatttgacgtgacatagattaaatacacaaatgcttaatgattgg 15964153  T
Q  366 ccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
     || |||||  | | | ||||| ||||||||| |||||  ||||||||||||||    
T  15964152 tcacttaac--tgccaaaaaagccattctcataacttcgtcatagaattttcca 15964101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 75 - 381
Target Start/End: Original strand, 10758004 - 10758311
Alignment:
Q  75 aaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaa 174  Q
    |||| |||||||||||||  |||||||||| || |||||  |||| || || |||| || ||||||| ||||||| ||||||| ||| ||||||||||      
T  10758004 aaaaattattttgtttagctaatagtataactgccgatgttatgtgagttagtgtcctgctggtggatcactctaaaactaaattttgctttattacact 10758103  T
Q  175 tcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagt 273  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||| ||| |||||||    
T  10758104 tcagtcatcatataaaatattaagagaaatttcaatcttagtgcacaaatgagaatatatgtttaattttgatttaattagggacacaattgcaataagt 10758203  T
Q  274 aaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaa 373  Q
    ||| ||||||||||| ||| ||| | ||||||  |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  10758204 aaaaatataatgacacacactataggcaaatgttcaatacaccatataatctgatgtggcatgaattaaatacacaaatgctcaatgattgaccatttaa 10758303  T
Q  374 ctttacta 381  Q
    ||| ||||    
T  10758304 cttcacta 10758311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 52 - 398
Target Start/End: Complemental strand, 25943563 - 25943218
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| |||||||||||||  | |||  ||||||||||||| |||||||||||||||||||  ||||||| |||   |  ||||||||||||||||||      
T  25943563 agtcagaaaattgactttt--aaaaacattattttgtttagccaatagtataattgtcgatctcatgtcaactagcattctgttggtggaccactctact 25943466  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaa 250  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  25943465 actaaattttatcttattacaaatcagtcatcgtacaaaatattaagagaaatttcaatcttattgcacaaatgagaatctatgtttaattttgatttaa 25943366  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    |||   ||| | ||  ||||| |||| |||||||| ||  ||||||   |||| | ||||||||||||||||||||||||||  |  |||||||| || |    
T  25943365 tcaaaaacaaaattacaataaataaagatataatggcacgcattatcagcaaacgtgcaatacaccatataatctgacgtgacgtcgattaaataaacta 25943266  T
Q  351 atgctcaatgattgaccatttaactttactagaaaagtcattctcatg 398  Q
    ||||||||| ||||| |||||||||| ||||||||| ||||| |||||    
T  25943265 atgctcaataattgatcatttaacttcactagaaaattcattatcatg 25943218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 48 - 349
Target Start/End: Original strand, 31804772 - 31805063
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||  ||||||||||||   |||||  ||||| ||||||||           ||||||     
T  31804772 gtgcagtcagaaaattgatttttttagtaaagttattttgtttaaccaatagtataatgaccgatgttatgtcggctaatgt-----------accacta 31804860  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgat 246  Q
    || || |||||||||| |||||||||| || |  || || |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31804861 taaaattaaactttaccttattacaaaccaattctcatataaaatattaagggaaatttcaatcttagtgcataaatgagaatctatgtttaattttgat 31804960  T
Q  247 ttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatac 346  Q
    |||||||| |||||| ||  || ||||||| |||||||||||||  |||| | |||||| ||||||||||||||||||| |||||  ||  |||||||||    
T  31804961 ttaatcagtgacacaatttcaagaagtaaagatataatgacatatgttatcggcaaatgtgcaatacaccatataatctaacgtggcatagattaaatac 31805060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 219 - 418
Target Start/End: Complemental strand, 16132675 - 16132475
Alignment:
Q  219 acaattgagaatctatgttta-ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacacca 317  Q
    |||| |||||||||||||||| ||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||  |||||| ||||||||||     
T  16132675 acaaatgagaatctatgtttaattttgatttaatcagagacacaattgcaataagtaaagatataatgacacacattatgtgcaaatgtgcaatacaccg 16132576  T
Q  318 tataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||| ||||   ||| |||||||||||||||||||||| |||  ||||||||||| || | |||||||| |||  |||||||||||||||||||||    
T  16132575 tataatctcacgttgcatggattaaatacacaaatgctcaataatttgccatttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttc 16132476  T
Q  418 c 418  Q
    |    
T  16132475 c 16132475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 42 - 236
Target Start/End: Complemental strand, 47555132 - 47554938
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||| |  ||| ||||||||||  |||||||||||||||||  ||||||||||| ||| || ||||||||| ||| |||| || | || ||    
T  47555132 tctacggtgcagttaggaaactgacttttttgaaaaagttattttgtttaaccaatagtataactgttgaggccatgtcaactagtgtcctgctagtaga 47555033  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    ||||||||  | |||||||||| ||||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||| |||||||||||||    
T  47555032 ccactctaagagtaaactttaccttattacaaatcagtcatcatacaaaatattaagaggaatttaaatcttagtgcacaaatgagaatctatgt 47554938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 16135694 - 16135528
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||||| ||||||  |||||||  ||||||||||||||||||  |||||||||| |||||||| ||||||| ||| ||||||  |||||||||||||    
T  16135694 gtgcagtcagaaaatttgcttttttgaaaaagttattttgtttagctaatagtataactgtcgatgtcatgtcaactagtgtcatactggtggaccactc 16135595  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatctta 214  Q
    || |||||||||||||  ||||||||||||||  || ||||||||||||| |  |||||||||||||    
T  16135594 taaaactaaactttaccctattacaaatcagttctcatacaaaatattaatgagaatttcaatctta 16135528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 3120549 - 3120727
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    |||| ||||||||||| |||| ||||||||||||  ||||| ||||| ||| ||||| ||||||  || |||| | ||||||||||||||||  | ||||    
T  3120549 aaaactgacttttttaaaaaaattattttgtttaaccaataatataactgttgatgctatgtcaattagtgtcctcttggtggaccactctaagattaaa 3120648  T
Q  158 ctttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    |||||| |||||||||||||||| || ||||| ||||||||||  |||||||| ||| ||||||| || ||||||||||    
T  3120649 ctttaccttattacaaatcagtcctcatacaatatattaaggggtatttcaattttaatgcacaaatgtgaatctatgt 3120727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 3120162 - 3120325
Alignment:
Q  59 aaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaac 158  Q
    ||||||| ||||||  |||| ||||||||||||   |||| ||||| ||| ||| |||||||| ||| |||||||||||||||||| ||||  ||| |||    
T  3120162 aaattgatttttttgaaaaaattattttgtttatcaaataatataactgttgataccatgtcaactagtgtcatgttggtggaccattctaagacttaac 3120261  T
Q  159 tttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaa 222  Q
    ||||||||||||||||||||||  | |||||  ||||||| |  |||| |||||||||||||||    
T  3120262 tttactttattacaaatcagtccacatacaatttattaagaggtattttaatcttagtgcacaa 3120325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 422349 - 422205
Alignment:
Q  53 gtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaa 152  Q
    ||||| ||| ||||||||||  |||||| ||||| ||||  |||||  ||| | || |||  |||||||||||||||| ||||| ||||||||||||  |    
T  422349 gtcaagaaaatgacttttttgaaaaagtcattttatttaaccaataacatagtagttgatatcatgtcagctaatgtcttgttgatggaccactctacga 422250  T
Q  153 ctaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||||||||||||||||||||| | |||| || |||||||||||||    
T  422249 ctaaactttactttattacaacttagtcctcatacaaaatattaa 422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 5500730 - 5500596
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||| |||||| | ||||||||  ||||||||||||||||||  |||||||||| | |||||| ||||||||||| |||  || | |||||    
T  5500730 tctacggtgcagttaaaaaactaacttttttgaaaaagttattttgtttagctaatagtataactatcgatgtcatgtcagctagtgttctg-tcgtgga 5500632  T
Q  142 ccactctagaactaaactttactttattacaaatca 177  Q
     ||||||| ||||||| ||||| |||||| ||||||    
T  5500631 tcactctaaaactaaattttaccttattataaatca 5500596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 43579292 - 43579241
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43579292 atttaacttcactagaaaagtcattctcatgacttcaccatagaattttcca 43579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 43579618 - 43579518
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||  ||| ||||||||| | ||| ||||||||||||||||||||||||||  ||  ||||||||||| |||||||  || |||||||||||||    
T  43579618 gtgcagtcagtaaactgactttttaaaaaatgttattttgtttagtcaatagtataaccgttaatgccatgtcaactaatgttctgctggtggaccactc 43579519  T
Q  148 t 148  Q
    |    
T  43579518 t 43579518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 3309192 - 3309142
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  3309192 ttaactttaccagaaaagtcattctcatgactttaccatagaattttccat 3309142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 28013070 - 28012925
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggacca-ctctag 150  Q
    |||||| ||| || |||||||  ||||||||||||| |||| |||||| |||||||| |||| ||||||||||| |||| || || | ||||| | | ||    
T  28013070 agtcaagaaaatgtcttttttgaaaaagttattttggttagccaatagcataattgttgatgtcatgtcagctagtgtcttgctgatagaccatcgcaag 28012971  T
Q  151 aactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
     | |||||||||| |||||||||||||||| ||||| ||| ||||||    
T  28012970 -agtaaactttaccttattacaaatcagtcctcgtaaaaactattaa 28012925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 38823258 - 38823209
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  38823258 ttaacttaaccagaaaagtcattctcatgacttcaccatagaattttcca 38823209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 1547331 - 1547283
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  1547331 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 1547283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 43579518 - 43579462
Alignment:
Q  182 tcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt 238  Q
    ||||||||||||||||||  ||||||||||||||||||||| | |||||||||||||    
T  43579518 tcgtacaaaatattaaggagaatttcaatcttagtgcacaaataagaatctatgttt 43579462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 31621688 - 31621734
Alignment:
Q  373 actttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  31621688 acttcactagaaaagtcattctcatgacttcaccgtagaattttcca 31621734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 17695951 - 17696012
Alignment:
Q  308 caatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat 369  Q
    |||| |||||||| |||||||||| ||||||||||||||| ||||  |||||||||||||||    
T  17695951 caatgcaccatatgatctgacgtggtatgaattaaatacataaatattcaatgattgaccat 17696012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 16415689 - 16415641
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||||||||||||||||| |||||||||||    
T  16415689 ttaacttcaccagaaaagtcattctcatgacttcaccttagaattttcc 16415641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 15752073 - 15752022
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    ||||||| || | |||||||||||||||||||||||||||||||||| ||||    
T  15752073 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttttcata 15752022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 17695202 - 17695253
Alignment:
Q  111 atgccatgtcagctaatgtcatgttggtggaccactctagaactaaacttta 162  Q
    ||||||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  17695202 atgccatgtcagctagtgtcatgttggtggatcactctaagactaaacttta 17695253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 42663783 - 42663830
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaattt 415  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  42663783 atttaacttcactaaaaaagtcattatcatgacttcaccatagaattt 42663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 27227609 - 27227659
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || | |||| |||||||||||||||||||||||||||||||||    
T  27227609 ttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttccat 27227659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 2959781 - 2959744
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| |||||||||||||||||||||||||    
T  2959781 agaaaagtcattttcatgacttcaccatagaattttcc 2959744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 4150498 - 4150535
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||||||| |||||||||||||||||||||||||    
T  4150498 agaaaagtcattatcatgacttcaccatagaattttcc 4150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 10182139 - 10182188
Alignment:
Q  369 tttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    |||||||| || | |||||||||| |||||||||||||||||||||||||    
T  10182139 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 10182188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 28012184 - 28012123
Alignment:
Q  300 caaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatga 361  Q
    |||||| ||||||||||||||||| | | |||| ||| ||||||||||||||| ||||||||    
T  28012184 caaatgtgcaatacaccatataatttaatgtgacatgcattaaatacacaaatactcaatga 28012123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 47279194 - 47279157
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47279194 aaaagtcattctcatgacttcaccatagatttttccat 47279157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 21289709 - 21289661
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  21289709 ttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 22170798 - 22170750
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| | ||||||||||||| |||||| ||||||||||||||||||    
T  22170798 ttaacttcattagaaaagtcattttcatgatttcaccatagaattttcc 22170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 39393427 - 39393379
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  39393427 ttaacttcattagaaaagtcattctcataacttcaccgtagaattttcc 39393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 47554766 - 47554718
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||||||||||| || ||| ||||||||||||||| |||||||||||||    
T  47554766 atttaactttaccagtaaaatcattctcatgactttaccatagaatttt 47554718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 33725735 - 33725778
Alignment:
Q  373 actttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    |||| |||||||||||||||||| |||||| |||||||||||||    
T  33725735 acttcactagaaaagtcattctcttgactttaccatagaatttt 33725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 412
Target Start/End: Original strand, 34491444 - 34491551
Alignment:
Q  309 aatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccat----ttaactttactagaaaagtcattctcatgacttca 404  Q
    |||||| | |||||||||| |||  ||| |||||||||||||||| | ||||||||| |||    ||||||| |  |||||| | |||||||| ||||||    
T  34491444 aatacatcttataatctgatgtggcatggattaaatacacaaatgtttaatgattgatcatagaattaacttcatcagaaaaattattctcatcacttca 34491543  T
Q  405 ccatagaa 412  Q
    ||||||||    
T  34491544 ccatagaa 34491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 421
Target Start/End: Complemental strand, 42721070 - 42721032
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttccata 421  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  42721070 aaaaatcattttcatgacttcaccatagaattttccata 42721032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 7843152 - 7843083
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtca 121  Q
    |||||| ||| ||||||||||  ||||||||||||| || | |||||| |||||||| ||||| ||||||    
T  7843152 agtcaagaaaatgactttttttaaaaagttattttggttggccaatagcataattgttgatgcaatgtca 7843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 47682625 - 47682674
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcca 419  Q
    ||||||| || | |||||||| |||||||||||||||||| |||||||||    
T  47682625 ttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttcca 47682674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 11742482 - 11742530
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||| ||||||| ||| ||||||||    
T  11742482 ttaacttcaccagaaaagtcattctcataacttcacgataaaattttcc 11742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 14758074 - 14758038
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||||||||||||||||||||| || |||||||    
T  14758074 agaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 18422695 - 18422647
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||| | |||||||||||||||||||||||    
T  18422695 ttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 18422647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 32267078 - 32267030
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| |||||||||||||| ||||||||    
T  32267078 ttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttcc 32267030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 37619028 - 37619076
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| || ||||||||||||||||||||    
T  37619028 ttaacttcaccaaaaaagtcattcttataacttcaccatagaattttcc 37619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 3e-86; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 37 - 418
Target Start/End: Original strand, 11083824 - 11084200
Alignment:
Q  37 gagcatctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttg 136  Q
    |||| ||||| ||| |||||||||||| ||||||||  |||||||||||| |||||| ||||||||||||||| ||  ||||||||||| |||| || |     
T  11083824 gagcttctacggtgaagtcaaaaaatttacttttttgaaaaagttattttatttagttaatagtataattgtcaatatcatgtcagctagtgtcgtgata 11083923  T
Q  137 gtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgt 236  Q
    |   ||||||||| |||||| |||||  |||||||||||||||| |  |||||||||| ||||| ||||||||||||| || |||| |||||||||||||    
T  11083924 g---accactctaaaactaagctttatcttattacaaatcagtccttatacaaaatat-aaggggaatttcaatcttaatgaacaaatgagaatctatgt 11084019  T
Q  237 tta-ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatat 335  Q
    ||| ||||||||||||||| |||||| ||| |||||||||| ||||||||||| || |||||| |||||| | |||||||||||||||  ||||||| ||    
T  11084020 ttaattttgatttaatcagagacacaattgcaataagtaaagatataatgacacaccttatgggcaaatgtgtaatacaccatataat--gacgtgacat 11084117  T
Q  336 gaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    | |||||||||| ||||  ||||||||||  ||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  11084118 ggattaaatacataaatattcaatgattggtcatttaactttaccagaaaagttattttcatgacttcaccatagaattttcc 11084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 42 - 418
Target Start/End: Complemental strand, 19632126 - 19631749
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagct--aatgtcatgttggtg 139  Q
    ||||| ||||||| | |||||||| ||||||  |||||||||||||||| | ||||||||||| |||||||| ||||||| |   | |||| || |||||    
T  19632126 tctacggtgcagttagaaaattgatttttttcaaaaagttattttgtttggacaatagtataactgtcgatgtcatgtcaccaggagtgtcctgctggtg 19632027  T
Q  140 gaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta 239  Q
    |||||||||| ||||||  ||||| ||||||  |||   || ||  |||||||||| |||| ||||||||||||||||||||| ||||||| ||| ||||    
T  19632026 gaccactctaaaactaagttttaccttattattaattgatcctc--acaaaatattgaggggaatttcaatcttagtgcacaaatgagaatttattttta 19631929  T
Q  240 -ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaa 338  Q
     ||||||||||||||| |||||  ||| |||||||||| ||||||||| | || |||| | |||||| ||||||||||||||||||| |||||| ||| |    
T  19631928 attttgatttaatcagagacacgattgcaataagtaaagatataatgaaacaccttataggcaaatgtgcaatacaccatataatctaacgtgacatgga 19631829  T
Q  339 ttaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||||||| ||||||||||  |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  19631828 ttaaatacacaaatgttcaatgattggtcatttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcc 19631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 42 - 418
Target Start/End: Original strand, 26301593 - 26301971
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||| ||| ||||||||||| |||||  |||| ||||||| |||||||||| ||||||||| ||||  |||||| |||| ||||||||||||||     
T  26301593 tctacggtgaagttaaaaaattgacatttttgaaaaaattattttatttagtcaat-gtataattgccgatatcatgtcggctagtgtcatgttggtggg 26301691  T
Q  142 ccactctagaactaaactttactttatt-acaaatcagtcatcgtacaaaatat---taagggaaatttcaatcttagtgcacaattgagaatctatgtt 237  Q
    |||||||| || |||  ||||  ||||| ||||||||||  || ||||||||||   ||| || ||||||||||||||| ||||| ||||||||||||||    
T  26301692 ccactctaaaattaagttttatcttatttacaaatcagttctcatacaaaatatatataaagggaatttcaatcttagtacacaaatgagaatctatgtt 26301791  T
Q  238 ta-ttttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatg 336  Q
    || |||||||||||||||||||||| ||| |||||||||| ||||||||||| |  ||||||| ||||  |||||||| |||||||  |||||||| |||    
T  26301792 taattttgatttaatcagggacacaattgcaataagtaaagatataatgacacatcttatggataaatatgcaatacatcatataa--tgacgtgacatg 26301889  T
Q  337 aattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||||||| ||||  ||||||||||  |||||||||| || | |||| ||||| | |||||||||||||| ||||||||    
T  26301890 aattaaatacataaatattcaatgattggtcatttaacttcacgaaaaaaatcatttttatgacttcaccatataattttcc 26301971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 48 - 342
Target Start/End: Complemental strand, 34994203 - 34993907
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaag-ttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccact 146  Q
    ||||||| | |||||||| ||||||| ||||  ||||||||||||| |||||  |||| ||| |||| |||||| |||| ||||||| |||||||| | |    
T  34994203 gtgcagttagaaaattgatttttttaaaaaaaattattttgtttagccaatataataagtgttgatgtcatgtcggctagtgtcatgctggtggactatt 34994104  T
Q  147 ctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttga 245  Q
    ||| ||||||| | ||  |||||||||||||||  |  || ||||||||||||| |||||||||||||||||| || |||||||||||||||| ||||||    
T  34994103 ctaaaactaaattgtatcttattacaaatcagttcttatataaaatattaaggggaatttcaatcttagtgcataaatgagaatctatgtttaattttga 34994004  T
Q  246 tttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaa 342  Q
    |||||||| ||||||| ||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  34994003 tttaatcaaggacacaattgtaataagtaaagatataataacatacattatggacaaatgtgcaatacaccatataatctgatgtgacatgaattaa 34993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 42 - 251
Target Start/End: Complemental strand, 4104393 - 4104183
Alignment:
Q  42 tctacagtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtgga 141  Q
    ||||| ||||||||| |||| ||||||||||  |||||||||||||| | |||||||||||||||||||||| |||||||| || |||| || |||||||    
T  4104393 tctactgtgcagtcagaaaactgacttttttgaaaaagttattttgtcttgtcaatagtataattgtcgatgtcatgtcagttagtgtcgtgctggtgga 4104294  T
Q  142 ccactctagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-at 240  Q
    |||||||| ||||||||||| | ||||||||||||| || || |||||||||||||||  ||||||||||||||||||||| || |||| ||||||| ||    
T  4104293 ccactctaaaactaaactttgccttattacaaatcaatcttcatacaaaatattaaggagaatttcaatcttagtgcacaaatgggaatttatgtttaat 4104194  T
Q  241 tttgatttaat 251  Q
    |||||||||||    
T  4104193 tttgatttaat 4104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 6613670 - 6613860
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||  ||| ||||||||||  |||||||||||||||||||||||||||||| | |  ||||||||||| ||||||   || |||||||||||||    
T  6613670 gtgcagtcaggaaactgacttttttgaaaaagttattttgtttagtcaatagtataagtcttaatgccatgtcaactaatggtctgctggtggaccactc 6613769  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt 238  Q
    ||  ||||||||| || ||||||||||| | || || |||||||||||||||  ||||||||||||||||||||| | |||||||||||||    
T  6613770 taagactaaacttcaccttattacaaatgaatcctcatacaaaatattaaggagaatttcaatcttagtgcacaaataagaatctatgttt 6613860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 166 - 318
Target Start/End: Complemental strand, 30341277 - 30341124
Alignment:
Q  166 tattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttt-attttgatttaatcagggacacagtt 264  Q
    |||||||||| |||| || |||||||||||||||| ||||||||||||||||||| | || |||||||| ||| ||||||||||||||| | ||||| ||    
T  30341277 tattacaaattagtcctcatacaaaatattaaggggaatttcaatcttagtgcactaatgggaatctatatttaattttgatttaatcatgaacacaatt 30341178  T
Q  265 ggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccat 318  Q
    | ||||||| || ||||||||||| |  |||||| ||||||  |||||||||||    
T  30341177 gcaataagtgaagatataatgacacaacttatgggcaaatgtacaatacaccat 30341124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 4487733 - 4487882
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    ||||||| |||||| ||||||||||| |||||| ||||||||||  |||||| ||| ||||  ||||||||||||||| |||| |  || |||||||||     
T  4487733 gtgcagttaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgccatgtcagctagtgtctttgtgatggaccactg 4487832  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| |||||||||||||||||||||| || ||||||| |||||    
T  4487833 taacactaaattttactttattacaaatcagtcctcatacaaaacattaa 4487882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 197
Target Start/End: Complemental strand, 25441858 - 25441709
Alignment:
Q  48 gtgcagtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactc 147  Q
    |||||||||||||| ||||||||||| |||||| ||||||||||  |||||| ||| ||||  ||| ||||| ||||| |||| |  || |||||||||     
T  25441858 gtgcagtcaaaaaaatgacttttttaaaaaagtcattttgtttaaccaatagcatagttgttcatgtcatgttagctagtgtctttgtgatggaccactg 25441759  T
Q  148 tagaactaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||  |||||| |||||||||| ||||||||||| || |||||||||||||    
T  25441758 taacactaaattttactttatcacaaatcagtcctcatacaaaatattaa 25441709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 18306573 - 18306707
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccact-ctagaactaaacttt 161  Q
    |||||||||| |||| || ||||||||||| |||||| |||| ||| |||||||||||||||| |||| || || |||||||||  |||| | ||| |||    
T  18306573 tgacttttttggaaatgtcattttgtttagccaatagaataaatgttgatgccatgtcagctagtgtcttgctgatggaccactgttagatc-aaatttt 18306671  T
Q  162 actttattacaaatcagtcatcgtacaaaatattaa 197  Q
    || ||||||||||||| || ||||||||||||||||    
T  18306672 accttattacaaatcaatcctcgtacaaaatattaa 18306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 30341577 - 30341461
Alignment:
Q  58 aaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaa 157  Q
    ||||||||||| |||   ||||||||||||||||| || |||||||||||  |||| ||||| ||||| |||| || ||||| | ||||||| |||| ||    
T  30341577 aaaattgacttgtttgagaaagttattttgtttagccagtagtataattgctgatgtcatgttagctagtgtcctgatggtgaatcactctaaaactgaa 30341478  T
Q  158 ctttactttattacaaa 174  Q
    |||||| ||||||||||    
T  30341477 ctttaccttattacaaa 30341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 416
Target Start/End: Complemental strand, 30338556 - 30338478
Alignment:
Q  338 attaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || ||||||||||||||| | |||||||||| |||| ||||||||||||||  |||||| |||||||||||    
T  30338556 attaaatgcataaatgctcaatgattaatcatttaacttcactaaaaaagtcattctcacaacttcatcatagaatttt 30338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 8513281 - 8513233
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  8513281 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 8513233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 24662190 - 24662240
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  24662190 ttaacttcactagaaaagtcattatcatgactttaccatagaattttccat 24662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 30353494 - 30353540
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||    
T  30353494 ttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 3880075 - 3880123
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  3880075 ttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttcc 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 4318959 - 4319007
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||    
T  4318959 ttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 4319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 20768123 - 20768087
Alignment:
Q  381 agaaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||||||||||||||||||||||||||||||||    
T  20768123 agaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 421
Target Start/End: Original strand, 7235182 - 7235221
Alignment:
Q  382 gaaaagtcattctcatgacttcaccatagaattttccata 421  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7235182 gaaaagtcattctcataacttcaccatagaattttccata 7235221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 6088956 - 6088910
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||    
T  6088956 ttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 3005406 - 3005440
Alignment:
Q  383 aaaagtcattctcatgacttcaccatagaattttc 417  Q
    |||||||||||||||||||||| ||||||||||||    
T  3005406 aaaagtcattctcatgacttcaacatagaattttc 3005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 3148828 - 3148885
Alignment:
Q  48 gtgcagtcaaaaaattgactttttt-agaaaagttattttgtttagtcaatagtataa 104  Q
    |||||||||||||||| |||||||| | |||||||||||| |||||  ||||||||||    
T  3148828 gtgcagtcaaaaaattaacttttttgaaaaaagttattttatttagctaatagtataa 3148885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 4102864 - 4102949
Alignment:
Q  308 caatacaccatataatctgacgtgatatgaattaaatacacaaatgctcaatgattgaccatttaactttactagaaaagtcattc 393  Q
    |||||||||||||||| ||| |||  ||  |||||||||||||||| |||||||||   |||||||||| || | |||| ||||||    
T  4102864 caatacaccatataatatgatgtggcatagattaaatacacaaatgttcaatgattagacatttaacttcaccaaaaaaatcattc 4102949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 24661704 - 24661744
Alignment:
Q  63 tgacttttttagaaaagttattttgtttagtcaatagtataa 104  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24661704 tgactttttta-aaaagttattttatttagtcaatagtataa 24661744  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 5627439 - 5627391
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||||||||||| ||||||||||| |||||||||||    
T  5627439 ttaacttcaccaaaaaagtcattcttatgacttcaccttagaattttcc 5627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 6614034 - 6614082
Alignment:
Q  368 atttaactttactagaaaagtcattctcatgacttcaccatagaatttt 416  Q
    ||||||||| || |||||||||||||| |||| ||||||||| ||||||    
T  6614034 atttaacttcaccagaaaagtcattcttatgatttcaccatataatttt 6614082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 18498481 - 18498433
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || || |||||||||||||||||||||| ||||| ||||||    
T  18498481 ttaacttcaccaggaaagtcattctcatgacttcactatagatttttcc 18498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 52 - 363
Target Start/End: Complemental strand, 5955 - 5645
Alignment:
Q  52 agtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctaga 151  Q
    ||||| ||||||  ||||||| ||||| ||||||| |||| | |||||||||| ||| || | |||||||| || |||| || | ||||||||||||| |    
T  5955 agtcataaaattatcttttttggaaaaattattttatttaattaatagtataactgtggaagtcatgtcagttagtgtc-tgctagtggaccactctaaa 5857  T
Q  152 actaaactttactttattacaaatcagtcatcgtacaaaatattaagggaaatttcaatcttagtgcacaattgagaatctatgttta-ttttgatttaa 250  Q
    |||||||||||| |||||| ||||||||  || ||||||||||||| | ||||||| |||||| || |||| || ||||| ||||||| |||||||||||    
T  5856 actaaactttaccttattataaatcagttctcatacaaaatattaaag-aaatttcgatcttaatgaacaaatgcgaatccatgtttaattttgatttaa 5758  T
Q  251 tcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacaccatataatctgacgtgatatgaattaaatacacaa 350  Q
    | ||||||| | ||| |||||| ||||||||||||||| || |||| | |||||| ||||||||||||||||||| || ||| |||||||||||||||||    
T  5757 tgagggacataattgcaataaggaaatatataatgacacaccttataggcaaatgtgcaatacaccatataatctaacatgacatgaattaaatacacaa 5658  T
Q  351 atgctcaatgatt 363  Q
    |||||||||||||    
T  5657 atgctcaatgatt 5645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 8223 - 8367
Alignment:
Q  53 gtcaaaaaattgacttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaa 152  Q
    ||||| ||| ||||||||||  |||||| ||||| ||||  |||||  ||| | || |||  |||||||||||||||| ||||| ||||||||||||  |    
T  8223 gtcaagaaaatgacttttttgaaaaagtcattttatttaaccaataacatagtagttgatatcatgtcagctaatgtcttgttgatggaccactctacga 8322  T
Q  153 ctaaactttactttattacaaatcagtcatcgtacaaaatattaa 197  Q
    ||||||||||||||||||||| | |||| || |||||||||||||    
T  8323 ctaaactttactttattacaacttagtcctcatacaaaatattaa 8367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 12035 - 12113
Alignment:
Q  239 attttgatttaatcagggacacagttggaataagtaaatatataatgacatacattatggacaaatgcgcaatacacca 317  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |  ||||||||||||  |||||||||||    
T  12035 attttgatttaatcaggaacacaattgcaataagtaaatatataatgacacatcttatggacaaatatgcaatacacca 12113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 12138 - 12188
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttccat 420  Q
    ||||||| || ||||||||||||||||| |||||| |||||||||||||||    
T  12138 ttaacttcaccagaaaagtcattctcataacttcatcatagaattttccat 12188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 11422 - 11495
Alignment:
Q  120 cagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtcatcgtacaaaata 193  Q
    |||||| ||||||||| ||| |||||||||  |||||| ||||  |||||||||||||||| || |||||||||    
T  11422 cagctagtgtcatgttagtgtaccactctaagactaaattttatcttattacaaatcagtcctcatacaaaata 11495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 180
Target Start/End: Complemental strand, 108062 - 107966
Alignment:
Q  83 ttttgtttagtcaatagtataattgtcgatgccatgtcagctaatgtcatgttggtggaccactctagaactaaactttactttattacaaatcagtc 180  Q
    |||||||||| ||||| ||||| | | ||||||||||||||||||||   ||||||||| |||||||   ||||||||| | ||||||||||||||||    
T  108062 ttttgtttagccaataatataacttt-gatgccatgtcagctaatgtaccgttggtggatcactctaagtctaaacttttccttattacaaatcagtc 107966  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 100869 - 100821
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || | |||| |||||||||||||||||||||||||||||||    
T  100869 ttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 42396 - 42348
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||| | |||||||||||||||||||| ||||||||    
T  42396 ttaacttcaccagaaaaattattctcatgacttcaccataaaattttcc 42348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 182 - 134
Alignment:
Q  370 ttaactttactagaaaagtcattctcatgacttcaccatagaattttcc 418  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||||    
T  182 ttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 66125 - 65992
Alignment:
Q  65 acttttttagaaaagttattttgtttagtcaatagtataattgtcgatgccatgtcagctaatgt---catgttggtggaccactctagaactaaacttt 161  Q
    ||||||||  |||| ||||||||||||| ||||||||||| ||| |||||||  | || || |||   |||  | |||||||||| ||  ||||||||||    
T  66125 acttttttgaaaaaattattttgtttagccaatagtataactgttgatgccaatttaggtagtgtgtccat--tcgtggaccactttaacactaaacttt 66028  T
Q  162 actttattacaaatcagtcatcgtacaaaatattaa 197  Q
    || |||||| |||| |||| || |||||||||||||    
T  66027 accttattataaattagtcctcatacaaaatattaa 65992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 416
Target Start/End: Complemental strand, 11944 - 11908
Alignment:
Q  381 agaaaagtcatt-ctcatgacttcaccatagaatttt 416  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11944 agaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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