View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15555_low_7 (Length: 404)
Name: NF15555_low_7
Description: NF15555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15555_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 36432092 - 36432453
Alignment:
| Q |
1 |
tcatcctcatccaaacctatgctaattgttcaacgcccctccgaacgaacaccgtcatggtcatcaccggcatcagataaattctaccattcagcgccaa |
100 |
Q |
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| T |
36432092 |
tcatcctcatccaaacctatgctaattgttcaacgcccctccgaacgaacaccgtcatggtcatcaccggcatcagataaattctaccattcagcgccaa |
36432191 |
T |
|
| Q |
101 |
tgaacgttccaatgatgtcttcagctatggcgaaccgcgcgaggcgatacgaagaagaagatgcacgtgctttaaacgaggaagaggaatttcgaagcac |
200 |
Q |
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| T |
36432192 |
tgaacgttccaatgatgtcttcagctatggcgaaccgcgcgaggcgatacgaagaagaagatgcacatgctttaaacgaggaagaggaatttcgaagcac |
36432291 |
T |
|
| Q |
201 |
gatgccaccgcatgagtatctttcaaggcaagtggatttttcgccgatgcattcgtgttcgttgtttgaaggtgttggtagaaccctaaaaggaagagat |
300 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36432292 |
gatgccaccgcatgagtatctttcaaggcaagtagatttttcgccgatgcattcgtgttcgttgtttgaaggtgttggtagaaccctaaaaggaagagat |
36432391 |
T |
|
| Q |
301 |
atgcgtcaagttaggaatgctgttttgagccaaacaggtttctttgattgaaagctactgaa |
362 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36432392 |
atgcgtcaagttaggaatgctgttttgagccaaacaggtttctttgattgaaagctactgaa |
36432453 |
T |
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