View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15558_high_6 (Length: 354)

Name: NF15558_high_6
Description: NF15558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15558_high_6
NF15558_high_6
[»] chr7 (67 HSPs)
chr7 (1-176)||(26161987-26162162)
chr7 (176-320)||(45663471-45663615)
chr7 (1-176)||(6498614-6498790)
chr7 (1-180)||(29639059-29639240)
chr7 (1-175)||(31632756-31632928)
chr7 (1-75)||(35776906-35776980)
chr7 (118-179)||(39342157-39342218)
chr7 (1-54)||(43791124-43791177)
chr7 (118-180)||(40496210-40496272)
chr7 (118-179)||(14602768-14602829)
chr7 (1-54)||(23455219-23455272)
chr7 (1-54)||(28539140-28539193)
chr7 (118-178)||(2411803-2411863)
chr7 (125-176)||(23548119-23548170)
chr7 (1-51)||(5644711-5644761)
chr7 (118-176)||(14790559-14790617)
chr7 (4-54)||(18789218-18789268)
chr7 (5-55)||(25189197-25189247)
chr7 (118-176)||(28538677-28538735)
chr7 (1-51)||(29065853-29065903)
chr7 (118-176)||(36328328-36328386)
chr7 (118-176)||(42817014-42817072)
chr7 (126-176)||(43791521-43791571)
chr7 (1-51)||(46069425-46069475)
chr7 (1-54)||(9784903-9784956)
chr7 (5-54)||(13814966-13815015)
chr7 (1-50)||(18789551-18789600)
chr7 (1-54)||(23548583-23548636)
chr7 (1-54)||(30524289-30524342)
chr7 (5-54)||(30587875-30587924)
chr7 (5-54)||(32650611-32650660)
chr7 (1-54)||(39342614-39342667)
chr7 (5-54)||(40495755-40495804)
chr7 (5-54)||(45984378-45984427)
chr7 (5-54)||(45988738-45988787)
chr7 (118-174)||(38320770-38320825)
chr7 (4-54)||(3905631-3905681)
chr7 (118-172)||(30080312-30080366)
chr7 (5-55)||(30080772-30080822)
chr7 (118-176)||(35456296-35456354)
chr7 (118-176)||(45984825-45984883)
chr7 (118-176)||(45989185-45989243)
chr7 (1-51)||(49052860-49052910)
chr7 (1-54)||(14603234-14603287)
chr7 (5-54)||(14790151-14790200)
chr7 (5-50)||(19865530-19865575)
chr7 (1-54)||(22391559-22391612)
chr7 (1-54)||(35455838-35455891)
chr7 (1-50)||(40110771-40110820)
chr7 (1-42)||(40110822-40110863)
chr7 (128-177)||(40495701-40495750)
chr7 (128-176)||(35488714-35488761)
chr7 (125-176)||(37460470-37460521)
chr7 (4-51)||(44915270-44915317)
chr7 (1-55)||(15990925-15990979)
chr7 (81-115)||(26162129-26162163)
chr7 (81-115)||(31632755-31632789)
chr7 (118-176)||(32651015-32651073)
chr7 (81-115)||(35776947-35776981)
chr7 (131-176)||(40667824-40667870)
chr7 (5-51)||(40854007-40854053)
chr7 (118-176)||(45181757-45181814)
chr7 (1-38)||(2057429-2057466)
chr7 (119-176)||(26416413-26416469)
chr7 (13-54)||(40495276-40495317)
chr7 (5-54)||(40667379-40667428)
chr7 (3-51)||(34388301-34388349)
[»] chr1 (67 HSPs)
chr1 (1-176)||(24273084-24273259)
chr1 (1-178)||(47541849-47542027)
chr1 (1-171)||(26500947-26501118)
chr1 (1-174)||(47165077-47165251)
chr1 (118-176)||(946871-946929)
chr1 (1-55)||(8224802-8224856)
chr1 (118-176)||(15467486-15467544)
chr1 (118-179)||(12293019-12293080)
chr1 (1-54)||(37447888-37447941)
chr1 (1-54)||(37448387-37448440)
chr1 (1-54)||(44570712-44570765)
chr1 (5-54)||(44571239-44571288)
chr1 (125-176)||(35499547-35499598)
chr1 (1-51)||(6470675-6470725)
chr1 (1-51)||(34756461-34756511)
chr1 (9-54)||(946955-947000)
chr1 (1-54)||(15467949-15468002)
chr1 (1-54)||(28632572-28632624)
chr1 (5-50)||(32128068-32128113)
chr1 (5-54)||(37447345-37447394)
chr1 (5-54)||(41822529-41822578)
chr1 (1-54)||(49659250-49659303)
chr1 (121-176)||(4663804-4663859)
chr1 (4-55)||(34003414-34003465)
chr1 (12-55)||(34003506-34003549)
chr1 (125-180)||(37036500-37036555)
chr1 (1-51)||(5474474-5474524)
chr1 (1-51)||(15034693-15034743)
chr1 (118-180)||(28632122-28632184)
chr1 (5-51)||(32572960-32573006)
chr1 (5-54)||(41822683-41822733)
chr1 (1-42)||(15034743-15034784)
chr1 (1-42)||(23536101-23536142)
chr1 (1-54)||(32647335-32647388)
chr1 (1-54)||(37036935-37036988)
chr1 (125-178)||(37446881-37446934)
chr1 (5-54)||(41823146-41823195)
chr1 (3-51)||(4038150-4038198)
chr1 (134-182)||(21267340-21267388)
chr1 (128-176)||(32128585-32128633)
chr1 (6-54)||(39887166-39887214)
chr1 (118-177)||(23969438-23969497)
chr1 (118-176)||(220644-220702)
chr1 (5-51)||(15245480-15245526)
chr1 (81-115)||(24273226-24273260)
chr1 (1-51)||(31195490-31195540)
chr1 (1-54)||(32287918-32287972)
chr1 (5-51)||(37214894-37214939)
chr1 (125-179)||(37447968-37448022)
chr1 (5-51)||(40264068-40264114)
chr1 (1-51)||(50005113-50005163)
chr1 (8-54)||(50471791-50471837)
chr1 (1-38)||(4038109-4038146)
chr1 (133-178)||(31166718-31166763)
chr1 (125-178)||(37447424-37447477)
chr1 (1-50)||(38277449-38277498)
chr1 (118-171)||(41822078-41822131)
chr1 (133-174)||(44571697-44571738)
chr1 (1-50)||(45565428-45565477)
chr1 (1-54)||(47820247-47820300)
chr1 (5-54)||(48953607-48953655)
chr1 (5-54)||(49216324-49216373)
chr1 (125-176)||(6470228-6470280)
chr1 (118-166)||(10166986-10167034)
chr1 (128-176)||(31196903-31196951)
chr1 (128-176)||(41480954-41481002)
chr1 (5-41)||(45565479-45565515)
[»] chr5 (71 HSPs)
chr5 (1-180)||(25935147-25935326)
chr5 (1-176)||(37722754-37722930)
chr5 (1-179)||(19533764-19533943)
chr5 (5-181)||(12064313-12064500)
chr5 (1-143)||(37145395-37145537)
chr5 (85-176)||(20320529-20320621)
chr5 (118-176)||(13390962-13391020)
chr5 (118-179)||(32249646-32249707)
chr5 (118-176)||(12480391-12480449)
chr5 (5-54)||(33146211-33146260)
chr5 (1-54)||(40090397-40090450)
chr5 (6-54)||(28490031-28490079)
chr5 (133-181)||(40089407-40089455)
chr5 (118-182)||(41761738-41761802)
chr5 (118-176)||(6771823-6771881)
chr5 (5-51)||(15270840-15270886)
chr5 (5-51)||(17542347-17542393)
chr5 (1-54)||(927336-927389)
chr5 (6-55)||(17492630-17492679)
chr5 (5-54)||(22305132-22305181)
chr5 (3-54)||(32250081-32250132)
chr5 (4-54)||(22766989-22767039)
chr5 (125-178)||(927799-927852)
chr5 (1-54)||(9894305-9894358)
chr5 (1-54)||(14834858-14834911)
chr5 (1-62)||(20320623-20320684)
chr5 (118-179)||(22304731-22304792)
chr5 (125-182)||(35111709-35111766)
chr5 (5-54)||(37241093-37241142)
chr5 (1-54)||(41762198-41762251)
chr5 (125-176)||(15579998-15580050)
chr5 (125-173)||(22304681-22304729)
chr5 (125-180)||(15270413-15270468)
chr5 (133-176)||(17541884-17541927)
chr5 (1-52)||(22303855-22303906)
chr5 (143-178)||(37145362-37145397)
chr5 (1-51)||(15374035-15374085)
chr5 (1-51)||(20523208-20523258)
chr5 (120-178)||(32317167-32317224)
chr5 (1-54)||(8255061-8255113)
chr5 (1-50)||(12479941-12479990)
chr5 (1-42)||(15373994-15374035)
chr5 (9-50)||(28489505-28489546)
chr5 (1-42)||(32390056-32390097)
chr5 (3-51)||(9764374-9764422)
chr5 (118-174)||(28489953-28490009)
chr5 (118-180)||(28490397-28490460)
chr5 (1-41)||(37241598-37241638)
chr5 (1-40)||(2721557-2721596)
chr5 (1-47)||(3563311-3563357)
chr5 (81-115)||(19533910-19533944)
chr5 (1-55)||(35379377-35379431)
chr5 (133-175)||(37091093-37091135)
chr5 (118-168)||(38178813-38178863)
chr5 (118-168)||(38206037-38206087)
chr5 (1-42)||(2316463-2316504)
chr5 (3-55)||(6772195-6772245)
chr5 (1-38)||(9764426-9764463)
chr5 (1-54)||(10314683-10314736)
chr5 (133-174)||(14835297-14835338)
chr5 (1-42)||(16515102-16515143)
chr5 (1-42)||(26281264-26281305)
chr5 (1-42)||(32470966-32471007)
chr5 (118-179)||(33995441-33995502)
chr5 (5-54)||(34105109-34105158)
chr5 (1-54)||(35111260-35111313)
chr5 (5-41)||(2550348-2550384)
chr5 (134-174)||(17492691-17492731)
chr5 (3-54)||(22302557-22302609)
chr5 (11-55)||(31367932-31367976)
chr5 (6-54)||(37090320-37090368)
[»] chr8 (56 HSPs)
chr8 (1-178)||(23011768-23011946)
chr8 (5-180)||(30444802-30444978)
chr8 (1-174)||(36103135-36103308)
chr8 (1-107)||(515475-515581)
chr8 (13-75)||(21465548-21465610)
chr8 (1-54)||(13144617-13144670)
chr8 (5-54)||(26520435-26520484)
chr8 (5-54)||(34008819-34008868)
chr8 (125-179)||(43185478-43185532)
chr8 (118-176)||(44346221-44346279)
chr8 (4-54)||(44889391-44889441)
chr8 (118-179)||(14729-14790)
chr8 (5-54)||(29611408-29611457)
chr8 (118-175)||(31980047-31980104)
chr8 (118-174)||(13145075-13145131)
chr8 (118-182)||(33986488-33986552)
chr8 (118-170)||(40733641-40733693)
chr8 (1-52)||(24044994-24045045)
chr8 (7-54)||(29482803-29482850)
chr8 (125-180)||(33376825-33376880)
chr8 (7-54)||(33377293-33377340)
chr8 (125-176)||(35978592-35978643)
chr8 (4-54)||(8049291-8049341)
chr8 (118-176)||(9983139-9983197)
chr8 (118-176)||(29256913-29256971)
chr8 (118-175)||(10593564-10593620)
chr8 (1-54)||(29257347-29257400)
chr8 (118-175)||(31976666-31976723)
chr8 (1-50)||(33986038-33986087)
chr8 (13-54)||(35979000-35979041)
chr8 (1-54)||(44346674-44346727)
chr8 (128-176)||(29482341-29482389)
chr8 (1-51)||(3853650-3853700)
chr8 (1-51)||(3858108-3858158)
chr8 (1-51)||(17110944-17110994)
chr8 (118-176)||(29611814-29611872)
chr8 (1-50)||(14272-14321)
chr8 (5-54)||(8469535-8469584)
chr8 (1-50)||(9982670-9982719)
chr8 (1-54)||(28324658-28324711)
chr8 (118-174)||(26519984-26520040)
chr8 (128-179)||(1087843-1087894)
chr8 (80-115)||(13144615-13144650)
chr8 (1-51)||(4156242-4156292)
chr8 (125-163)||(7079787-7079825)
chr8 (133-179)||(7669142-7669188)
chr8 (1-51)||(13404902-13404952)
chr8 (81-115)||(23011767-23011801)
chr8 (1-54)||(1088273-1088326)
chr8 (1-42)||(17110903-17110944)
chr8 (1-54)||(31976578-31976631)
chr8 (1-54)||(31980479-31980532)
chr8 (1-54)||(35404738-35404791)
chr8 (1-42)||(42711364-42711405)
chr8 (5-41)||(7202885-7202921)
chr8 (118-178)||(36624808-36624868)
[»] chr3 (68 HSPs)
chr3 (1-176)||(19475850-19476026)
chr3 (1-176)||(8762160-8762336)
chr3 (5-179)||(54761423-54761598)
chr3 (49-178)||(33871762-33871892)
chr3 (5-180)||(47714307-47714490)
chr3 (1-54)||(21307517-21307570)
chr3 (118-178)||(35279468-35279528)
chr3 (128-177)||(21307110-21307159)
chr3 (1-54)||(30766587-30766640)
chr3 (118-179)||(34089067-34089128)
chr3 (1-54)||(53129828-53129881)
chr3 (134-178)||(7977058-7977102)
chr3 (128-179)||(671185-671236)
chr3 (125-176)||(36397511-36397562)
chr3 (125-180)||(43863482-43863537)
chr3 (125-176)||(53469951-53470002)
chr3 (118-180)||(28181794-28181856)
chr3 (1-51)||(31070440-31070490)
chr3 (118-172)||(34396148-34396202)
chr3 (5-51)||(38506864-38506910)
chr3 (124-178)||(52527507-52527561)
chr3 (1-54)||(7302380-7302433)
chr3 (133-182)||(24241705-24241754)
chr3 (1-54)||(34088605-34088658)
chr3 (1-54)||(36397974-36398027)
chr3 (1-54)||(47767466-47767519)
chr3 (1-54)||(48947639-48947692)
chr3 (118-178)||(21731410-21731470)
chr3 (1-52)||(671606-671657)
chr3 (1-52)||(37054428-37054479)
chr3 (7-54)||(53470414-53470461)
chr3 (1-55)||(13176546-13176600)
chr3 (118-176)||(48948073-48948131)
chr3 (5-54)||(2104772-2104821)
chr3 (1-54)||(7976582-7976635)
chr3 (1-42)||(9129428-9129469)
chr3 (1-42)||(9137535-9137576)
chr3 (5-54)||(26323394-26323443)
chr3 (1-42)||(27251978-27252019)
chr3 (118-179)||(38506481-38506542)
chr3 (1-42)||(44436342-44436383)
chr3 (1-42)||(44692906-44692947)
chr3 (1-42)||(46672800-46672841)
chr3 (118-170)||(645741-645793)
chr3 (10-54)||(43863936-43863979)
chr3 (1-54)||(46706684-46706739)
chr3 (136-176)||(50168191-50168231)
chr3 (125-156)||(19475745-19475776)
chr3 (1-52)||(42005940-42005991)
chr3 (118-173)||(48824637-48824692)
chr3 (1-52)||(52527070-52527121)
chr3 (1-55)||(13339447-13339501)
chr3 (5-51)||(46429434-46429480)
chr3 (9-51)||(47284191-47284233)
chr3 (5-55)||(55460378-55460428)
chr3 (5-42)||(332012-332049)
chr3 (5-50)||(332051-332096)
chr3 (125-178)||(2105228-2105281)
chr3 (81-114)||(8762159-8762192)
chr3 (5-54)||(9007440-9007489)
chr3 (1-42)||(28092248-28092289)
chr3 (12-53)||(28182234-28182275)
chr3 (1-54)||(50168595-50168648)
chr3 (3-51)||(5415858-5415906)
chr3 (118-170)||(28092155-28092206)
chr3 (1-41)||(31189395-31189435)
chr3 (128-176)||(44288024-44288072)
chr3 (3-51)||(44692858-44692906)
[»] chr4 (57 HSPs)
chr4 (1-178)||(10633066-10633243)
chr4 (5-178)||(21012437-21012611)
chr4 (1-176)||(31473883-31474059)
chr4 (118-178)||(46242620-46242680)
chr4 (128-179)||(3803726-3803777)
chr4 (118-176)||(40547768-40547826)
chr4 (1-54)||(1539675-1539728)
chr4 (118-179)||(41139962-41140023)
chr4 (5-54)||(42775643-42775692)
chr4 (118-176)||(30303610-30303668)
chr4 (1-54)||(2125891-2125944)
chr4 (1-54)||(29091171-29091224)
chr4 (1-54)||(35470156-35470209)
chr4 (125-181)||(42775775-42775831)
chr4 (125-176)||(21782470-21782521)
chr4 (118-173)||(42776575-42776630)
chr4 (118-173)||(47108710-47108765)
chr4 (118-176)||(2126328-2126386)
chr4 (118-176)||(35470614-35470672)
chr4 (1-50)||(16300209-16300258)
chr4 (5-54)||(17727103-17727152)
chr4 (1-54)||(26534527-26534580)
chr4 (118-175)||(27284221-27284278)
chr4 (5-54)||(40338238-40338287)
chr4 (5-54)||(40548204-40548253)
chr4 (1-54)||(41139507-41139560)
chr4 (5-54)||(56339171-56339220)
chr4 (127-179)||(54566673-54566725)
chr4 (1-51)||(857273-857323)
chr4 (1-43)||(4896715-4896757)
chr4 (1-51)||(10128049-10128099)
chr4 (1-51)||(15660258-15660308)
chr4 (126-176)||(16516666-16516716)
chr4 (118-180)||(28751740-28751802)
chr4 (1-55)||(42776671-42776725)
chr4 (1-54)||(16516205-16516258)
chr4 (2-54)||(31947628-31947678)
chr4 (4-53)||(46242531-46242580)
chr4 (5-54)||(53760776-53760825)
chr4 (118-170)||(5716129-5716181)
chr4 (118-182)||(31948063-31948127)
chr4 (4-51)||(1107127-1107174)
chr4 (118-173)||(5579654-5579709)
chr4 (4-51)||(36455944-36455991)
chr4 (81-115)||(10633065-10633099)
chr4 (118-176)||(19461266-19461324)
chr4 (5-51)||(26250984-26251030)
chr4 (5-51)||(27284651-27284697)
chr4 (1-51)||(28845905-28845955)
chr4 (81-115)||(31473882-31473916)
chr4 (1-51)||(42844577-42844627)
chr4 (143-177)||(43955047-43955081)
chr4 (1-42)||(857323-857364)
chr4 (1-42)||(1112706-1112747)
chr4 (5-54)||(11041039-11041088)
chr4 (1-42)||(49111396-49111437)
chr4 (1-41)||(1112639-1112679)
[»] chr2 (67 HSPs)
chr2 (1-178)||(11532112-11532292)
chr2 (1-178)||(10480153-10480331)
chr2 (1-176)||(11793929-11794105)
chr2 (5-178)||(7684482-7684656)
chr2 (118-178)||(7309434-7309494)
chr2 (118-174)||(21504941-21504997)
chr2 (118-185)||(2925142-2925209)
chr2 (118-176)||(8735965-8736023)
chr2 (118-180)||(39630717-39630779)
chr2 (118-179)||(1583329-1583390)
chr2 (5-54)||(8736427-8736476)
chr2 (1-54)||(32839634-32839687)
chr2 (118-178)||(769523-769583)
chr2 (118-178)||(33188787-33188847)
chr2 (3-50)||(11607257-11607304)
chr2 (5-55)||(20935744-20935794)
chr2 (118-176)||(32839188-32839246)
chr2 (118-176)||(35047201-35047259)
chr2 (125-178)||(3092744-3092797)
chr2 (1-54)||(13017813-13017866)
chr2 (1-52)||(7167655-7167706)
chr2 (125-176)||(8736510-8736561)
chr2 (3-50)||(11595355-11595402)
chr2 (125-176)||(13018243-13018294)
chr2 (125-176)||(14306364-14306415)
chr2 (118-177)||(44256125-44256184)
chr2 (1-51)||(27033524-27033574)
chr2 (1-55)||(28740630-28740684)
chr2 (1-54)||(769070-769123)
chr2 (1-54)||(1583795-1583848)
chr2 (1-54)||(30698315-30698368)
chr2 (5-54)||(32840178-32840227)
chr2 (1-54)||(33189243-33189296)
chr2 (128-180)||(17906143-17906195)
chr2 (118-178)||(19231015-19231074)
chr2 (1-51)||(784868-784918)
chr2 (12-54)||(7611874-7611916)
chr2 (133-179)||(19072337-19072383)
chr2 (5-51)||(21504488-21504534)
chr2 (126-176)||(28021706-28021756)
chr2 (1-51)||(41461590-41461640)
chr2 (1-54)||(3092316-3092369)
chr2 (1-54)||(7309749-7309802)
chr2 (1-54)||(11141339-11141392)
chr2 (133-174)||(11141811-11141852)
chr2 (1-42)||(11716442-11716483)
chr2 (1-42)||(14365734-14365775)
chr2 (1-50)||(14954343-14954392)
chr2 (1-54)||(35047665-35047718)
chr2 (126-178)||(41585192-41585244)
chr2 (118-173)||(19193746-19193801)
chr2 (4-51)||(40026101-40026148)
chr2 (7-54)||(44255674-44255721)
chr2 (81-115)||(11793928-11793962)
chr2 (5-51)||(14537274-14537320)
chr2 (4-54)||(45094457-45094507)
chr2 (9-54)||(1730095-1730140)
chr2 (1-54)||(7227998-7228051)
chr2 (125-174)||(7611421-7611470)
chr2 (1-54)||(11594842-11594895)
chr2 (5-42)||(11684674-11684711)
chr2 (1-42)||(14537233-14537274)
chr2 (1-46)||(17905688-17905733)
chr2 (125-178)||(31703921-31703974)
chr2 (1-54)||(39630259-39630311)
chr2 (5-54)||(41585676-41585725)
chr2 (118-150)||(30265822-30265854)
[»] chr6 (28 HSPs)
chr6 (1-176)||(13487309-13487485)
chr6 (1-176)||(34244843-34245019)
chr6 (1-179)||(34364777-34364957)
chr6 (1-176)||(29889296-29889473)
chr6 (118-177)||(8475620-8475679)
chr6 (129-180)||(15615916-15615967)
chr6 (1-51)||(9763046-9763096)
chr6 (5-50)||(1195371-1195416)
chr6 (5-54)||(8475199-8475248)
chr6 (1-54)||(9697496-9697549)
chr6 (1-54)||(15832500-15832553)
chr6 (1-54)||(28918199-28918252)
chr6 (118-178)||(1195795-1195855)
chr6 (118-178)||(6357823-6357883)
chr6 (6-54)||(31412940-31412988)
chr6 (125-180)||(724807-724862)
chr6 (125-176)||(1368974-1369025)
chr6 (133-176)||(10105512-10105555)
chr6 (1-51)||(9285681-9285731)
chr6 (1-42)||(6919742-6919783)
chr6 (128-185)||(9697889-9697946)
chr6 (1-51)||(776155-776205)
chr6 (1-54)||(1368511-1368564)
chr6 (1-42)||(9763096-9763137)
chr6 (125-174)||(31413358-31413407)
chr6 (1-49)||(6358242-6358290)
chr6 (1-41)||(15299510-15299550)
chr6 (1-49)||(26901755-26901803)
[»] scaffold0027 (3 HSPs)
scaffold0027 (77-175)||(11279-11378)
scaffold0027 (1-72)||(10920-10991)
scaffold0027 (74-114)||(10912-10952)
[»] scaffold0169 (2 HSPs)
scaffold0169 (1-54)||(4109-4162)
scaffold0169 (118-179)||(4510-4571)
[»] scaffold0318 (2 HSPs)
scaffold0318 (1-54)||(2901-2953)
scaffold0318 (128-176)||(3358-3406)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-54)||(109069-109118)
[»] scaffold0417 (1 HSPs)
scaffold0417 (118-173)||(11499-11554)
[»] scaffold0400 (1 HSPs)
scaffold0400 (4-54)||(4484-4534)
[»] scaffold0365 (1 HSPs)
scaffold0365 (4-54)||(5128-5178)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-55)||(130388-130442)
[»] scaffold0301 (2 HSPs)
scaffold0301 (1-54)||(7185-7238)
scaffold0301 (118-163)||(7643-7688)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-50)||(19232-19280)
[»] scaffold0065 (2 HSPs)
scaffold0065 (9-54)||(9572-9617)
scaffold0065 (125-162)||(2542-2579)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-42)||(42031-42072)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-49)||(82977-83025)
[»] scaffold0044 (2 HSPs)
scaffold0044 (3-51)||(56349-56397)
scaffold0044 (1-38)||(56308-56345)
[»] scaffold0047 (1 HSPs)
scaffold0047 (12-51)||(50296-50335)
[»] scaffold1562 (1 HSPs)
scaffold1562 (1-38)||(493-530)
[»] scaffold1158 (1 HSPs)
scaffold1158 (1-38)||(2063-2100)
[»] scaffold0337 (1 HSPs)
scaffold0337 (125-162)||(15500-15537)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-54)||(221182-221235)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 26162162 - 26161987
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26162162 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggatgggggaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 26162063  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26162062 ttcaaatactttgagataattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 45663615 - 45663471
Alignment:
Q  176 taaggttcatcatcttttataaataatgtgtacggaacactaaatccatggattgttgtattaccatcattatcgactttccaacattattcacaaattt 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45663615 taaggttcatcatcttttataaataatgtgtacggaacactaaatccatgtattgttgtattaccatcattatcgactttccaacatgattcacaaattt 45663516  T
Q  276 tgacaccaattgtcaccaaactcatatttaatcttcacaaaaata 320  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  45663515 tgacaccaattgtcaccaaactcatatttaatcttctcaaaaata 45663471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 6498790 - 6498614
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| || ||||||||||||| || ||||||||||||||||||| ||||    
T  6498790 atgtaatgttttgagggaattcaaatactttgatgtgaataccattgtttggatgtgggaatgtaatgtaatattgaggaaatgtaatgttatgaaggaa 6498691  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||| | |||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  6498690 ttcaaatactttgaggtaaattgcctagaattttaaagaatttaaaatttccaaattacctcatccaaacacactct 6498614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29639240 - 29639059
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||||||| |||    
T  29639240 atgtaatgttatgaggaaattcaaatattttgaggtgaattccattgtttggatgtgagaatgtaatgtaatgttgaggaaatgtaatgttatgagagaa 29639141  T
Q  101 ttcaaatgctttgagat-aattgcttagaattt-taaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||| | |||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  29639140 ttcaaatactttgaggtaaattgcctagaatttaaaaattctttaaaattttcaaattacctcatccaaacacactctaagg 29639059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 31632756 - 31632928
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31632756 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttgaatgggg-aatgtaatgtaatgttgaggaaatgtaatgttatgagggaa 31632854  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    ||||||| ||||||| | |||||  |||||||||||||||||  |||||| |||||||||| ||||||||||||||    
T  31632855 ttcaaatactttgaggtaaattgtctagaattttaaattctt--aaattttcaaattaccttatccaaacacactc 31632928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35776980 - 35776906
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgtt 75  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||    
T  35776980 atgtaatgttatgagggaattcaaatactttgaggtgaattccattatttggatgagggaatgtaatgtaatgtt 35776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 39342218 - 39342157
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  39342218 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 39342157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43791124 - 43791177
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43791124 atgtaatgttttgagggaattcaaatactttgaggtgaactccattgtttggat 43791177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 40496210 - 40496272
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  40496210 aattgcctagaattataaattctttaaaatttcttaattacctcatccaaacatactctaagg 40496272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 14602829 - 14602768
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||||||    
T  14602829 aattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacacactctaag 14602768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23455272 - 23455219
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  23455272 atgtattgttttgagggaattcaaatactttggggtgaattccattgtttggat 23455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28539193 - 28539140
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  28539193 atgtattgttttgagggaattcaaatactttggggtgaattccattgtttggat 28539140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 2411803 - 2411863
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  2411803 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacactctctaa 2411863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 23548170 - 23548119
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  23548170 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 23548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5644711 - 5644761
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  5644711 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 5644761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 14790559 - 14790617
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||| ||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  14790559 aattgcctaggattctaaattctttaaaattttccaattacctcatccaaacacactct 14790617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 18789268 - 18789218
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  18789268 taatgttatgagggaattcaaatactttaaggtgaattccattgtttggat 18789218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 25189247 - 25189197
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  25189247 aatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatg 25189197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 28538735 - 28538677
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| || |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  28538735 aattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactct 28538677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29065853 - 29065903
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  29065853 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 29065903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 36328386 - 36328328
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  36328386 aattgcctagaattctaaattttttaaaatttctcaattacctcatccaaacacactct 36328328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 42817014 - 42817072
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||| ||||||||||    
T  42817014 aattgcctagaattctaaattctttaaaatttctcaattacctcatcctaacacactct 42817072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 43791521 - 43791571
Alignment:
Q  126 agaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  43791521 agaattctaaattctttaaaattttccaattacctcatccaaacacactct 43791571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46069425 - 46069475
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  46069425 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 46069475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9784956 - 9784903
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||    
T  9784956 atgtattgttttgagggaattcaaatactttggggtgaaatccattgtttggat 9784903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13815015 - 13814966
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  13815015 aatgttttgagggaattcaaatactttgatgtgaattccattatttggat 13814966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18789551 - 18789600
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  18789551 atgtaatgttacgagggaattcaaatactttgaggtgaattccattgttt 18789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23548636 - 23548583
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||||||| |||||||||||| || |||||||||||||||||||||    
T  23548636 atgtattgttttgaggaaattcaaatactttggggtgaattccattgtttggat 23548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30524289 - 30524342
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| || | |||||| ||||||||||||    
T  30524289 atgtaatgttttgagggaattcaaatactttgggatgaatttcattgtttggat 30524342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 30587924 - 30587875
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  30587924 aatgttttgagggaattcaaatactttaatgtgaattccattgtttggat 30587875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32650611 - 32650660
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  32650611 aatgttttgagggaattcaaatactttgaggtgaattttattgtttggat 32650660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39342667 - 39342614
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  39342667 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 39342614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40495755 - 40495804
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttggat 40495804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 45984378 - 45984427
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  45984378 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggat 45984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 45988738 - 45988787
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  45988738 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggat 45988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 38320770 - 38320825
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  38320770 aattgcctagaattttaaattctttaaaattttc-aattaccacatccaaacacact 38320825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 3905681 - 3905631
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||| | |||||||||||||| |||||||||||| |||||||||||    
T  3905681 taatgttttcaaggaattcaaatactttgaggtgaattctattgtttggat 3905631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 30080366 - 30080312
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacaca 172  Q
    |||||||||||||| ||||||||| ||||||||  |||||||||||| |||||||    
T  30080366 aattgcttagaattctaaattcttcaaaatttctcaattacctcatcaaaacaca 30080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 30080822 - 30080772
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||||||| |||| ||||||| | |||||||||||||||||||||||    
T  30080822 aatgttttgaggaaatttaaatactttcaggtgaattccattgtttggatg 30080772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 35456296 - 35456354
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| |||||||||||||| ||   ||||||||||||||||||||||||    
T  35456296 aattgcctagaattctaaattctttaaaaattttcaattacctcatccaaacacactct 35456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 45984825 - 45984883
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||   |||||| ||||||||||||||||    
T  45984825 aattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactct 45984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 45989185 - 45989243
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||   |||||| ||||||||||||||||    
T  45989185 aattgcctagaattctaaattctttaaaatttctctattaccccatccaaacacactct 45989243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49052910 - 49052860
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  49052910 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 49052860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14603287 - 14603234
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || ||| |||||||||||||||||    
T  14603287 atgtattgttttaagggaattcaaatactttggggtaaattccattgtttggat 14603234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 14790151 - 14790200
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| |||||||||||  ||| |||||||    
T  14790151 aatgttttgagggaattcaaatactttgaggtgaattttattatttggat 14790200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 19865575 - 19865530
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||    
T  19865575 aatgttttgaggaaattcaaatactttgaggtgaatttcattgttt 19865530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22391612 - 22391559
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||| ||||| ||||| | ||||||||||| ||||||||||||    
T  22391612 atgtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttggat 22391559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35455838 - 35455891
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || ||| |||||||||||||||||    
T  35455838 atgtattgttttaagggaattcaaatactttggggtaaattccattgtttggat 35455891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40110771 - 40110820
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||||||    
T  40110771 atgtaatgttttgagggaattcaactactttaaggtgaattctattgttt 40110820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40110863 - 40110822
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  40110863 atgtaatgttttgagggaattcaactactttgaggtgaattc 40110822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 40495701 - 40495750
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactcta 177  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||||||    
T  40495701 aattctaaattcttcaaaatttctcaattacctcatccaaacacactcta 40495750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 35488714 - 35488761
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||    
T  35488714 aattttaaattctttaaaattttc-aattacatcatccaaacacactct 35488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 37460521 - 37460470
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||||||||||| ||   |||||||||||||||| |||||||    
T  37460521 tagaattttaaattctttaaaaattttcaattacctcatccaaatacactct 37460470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 44915317 - 44915270
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  44915317 taatgttttgagggaattcaactactctaaggtgaattctattgtttg 44915270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15990925 - 15990979
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||| |||| |||||||||||||| |||| | |||| |||||||||||||    
T  15990925 atgtaatgtcttgaaggaattcaaatactttgagataaattgcattgtttggatg 15990979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 26162163 - 26162129
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  26162163 aatgtaatgttatgagggaattcaaatactttgag 26162129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 31632755 - 31632789
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  31632755 aatgtaatgttatgagggaattcaaatactttgag 31632789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 32651015 - 32651073
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||| ||| | |||||||||| |||||| ||||||||||||||||| ||||||    
T  32651015 aattgcctaggattctgaattctttaagatttcccaattacctcatccaaactcactct 32651073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 35776981 - 35776947
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  35776981 aatgtaatgttatgagggaattcaaatactttgag 35776947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 40667824 - 40667870
Alignment:
Q  131 tttaaattc-tttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  40667824 tttaaattcgtttaaaatttctcaattacctcatccaaacacactct 40667870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 40854007 - 40854053
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttg 40854053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 45181814 - 45181757
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| |||| ||| |||||||| ||| ||||||||||||||||||||||    
T  45181814 aattgcctagaattctaaactctctaaaattttcaa-ttacctcatccaaacacactct 45181757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2057429 - 2057466
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  2057429 atgtaatgttttgagggaattcaactactttgaggtga 2057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 26416413 - 26416469
Alignment:
Q  119 attgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||| ||||||| ||||||||| ||||||||  ||||||||||| ||||||||||||    
T  26416413 attgcctagaattctaaattcttcaaaatttctcaattacctcat-caaacacactct 26416469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 40495276 - 40495317
Alignment:
Q  13 gagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  40495276 gagggaattcaaatactttgatgtgaattctattgtttggat 40495317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40667379 - 40667428
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| ||||||| || | |||||| ||||||||||||    
T  40667379 aatgttttgagggaatttaaatactttgggatgaatttcattgtttggat 40667428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 34388301 - 34388349
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||| |||| |||||||| |||| | |||||||||||||||||||    
T  34388301 gtaatgttctgagagaattcaactactttaaggtgaattccattgtttg 34388349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 24273259 - 24273084
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24273259 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggatgggggaatgtaatgtaatgttaaggaaatgtaatgttacgagggaa 24273160  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24273159 ttcaaatactttgagataattgcgtagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 24273084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 47542027 - 47541849
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||| ||||| ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||||| ||| |||||||    
T  47542027 atgtaatgttatgagagaatttaaatactttgaggtgaatttcattgtttgaatgggggaatgtaatgtaatgttgaggaaatgtaatattacgagggaa 47541928  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47541927 ttcaaatactttgaggtaaattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaa 47541849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 26501118 - 26500947
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| || | |||||||||| |||||| ||||    
T  26501118 atgtaatgttttgagggaattcaaatactttgatgtgaattccattgtttggatgggggaatgtaatgtaatattgatgaaatgtaatattatgaaggaa 26501019  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacac 171  Q
    ||||||| ||||||| | |||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  26501018 ttcaaatactttgaggtaaattacctagaattttaaattctttaaaattttcaaattacctcatccaaacac 26500947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 47165251 - 47165077
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||  ||  |||||||||||| |||||||||| ||||||||||| ||||    
T  47165251 atgtaatgttttgagggaattcaaatactttaaggtgaattccattgtttggatatggggatgtaatgtaatattaaggaaatataatgttatgaaggaa 47165152  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||| ||||||| | |||| | || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47165151 ttcaaatactttgaggtaaattacctaaaattttaaattctttaaaattttcaaattacctcatccaaacacact 47165077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 946871 - 946929
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  946871 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8224802 - 8224856
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  8224802 atgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttggatg 8224856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 15467544 - 15467486
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  15467544 aattgcctagaattctaaattctttaaaatttcttaattacctcatccaaacacactct 15467486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 12293080 - 12293019
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| |||||||||| | |||||| |||||||||||||||||||||||||||    
T  12293080 aattgcctagaattctaaattctttgagatttcccaattacctcatccaaacacactctaag 12293019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37447941 - 37447888
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  37447941 atgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggat 37447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37448440 - 37448387
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  37448440 atgtaatgttttgagggaatttaaatactttgatgtgaattccattgtttggat 37448387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44570712 - 44570765
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  44570712 atgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggat 44570765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 44571239 - 44571288
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44571239 aatgttttgagggaattcaaatactttgaagtgaattccattgtttggat 44571288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 35499547 - 35499598
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  35499547 tagaattctaaattctttaaaattttcaaattacttcatccaaacacactct 35499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6470725 - 6470675
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  6470725 atgtaatgttttgagggaattcaaattctttgaggtggattccattgtttg 6470675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34756461 - 34756511
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  34756461 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 34756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 946955 - 947000
Alignment:
Q  9 ttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  946955 ttttgaggaaattcaaatactatgaggtgaattccattgtttggat 947000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15468002 - 15467949
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  15468002 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 15467949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28632624 - 28632572
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  28632624 atgtaatgttttgagagaattcaa-tactttgaggtgaattccattgtttggat 28632572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 32128068 - 32128113
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||||||||||||||||| || |||||||||||||||||    
T  32128068 aatgttttgagggaattcaaatactttgtggtgaattccattgttt 32128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 37447394 - 37447345
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  37447394 aatgttttgagagaattcaaatactttgatgtgaattccattgtttggat 37447345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41822578 - 41822529
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||    
T  41822578 aatgttttgagggaattcaaatactttaagatgaattccattgtttggat 41822529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49659250 - 49659303
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||    
T  49659250 atgtaatgttacgagggaatttaaatactttgaggtgaattccattgtttggat 49659303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 4663804 - 4663859
Alignment:
Q  121 tgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||| |||||    
T  4663804 tgcttagaattttaaattccttaaaatttgtcaattacctcatccaaacaaactct 4663859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 34003414 - 34003465
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||| ||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  34003414 taatattttgagggcattcaaatactttgaggtgaattccattatttggatg 34003465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 34003506 - 34003549
Alignment:
Q  12 tgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  34003506 tgagagaattcaaatactttgaggtgaattccattgtttggatg 34003549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 37036555 - 37036500
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||||||    
T  37036555 tagaattctaaattcttcaaaatttcttaattaccccatccaaacacactctaagg 37036500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5474524 - 5474474
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  5474524 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 5474474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15034693 - 15034743
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  15034693 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 15034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 28632184 - 28632122
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| ||||||| |||||| |||| ||||||  ||||| ||||||||||||||||||||||    
T  28632184 aattgcctagaattctaaattttttataatttctcaattatctcatccaaacacactctaagg 28632122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 32572960 - 32573006
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttg 32573006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41822733 - 41822683
Alignment:
Q  5 aatgttttgagggaatt-caaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  41822733 aatgttttgagggaatttcaaatactttgagatgaattccattgtttggat 41822683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15034784 - 15034743
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  15034784 atgtaatgttttgagggaattcaactactttgaggtgaattc 15034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23536101 - 23536142
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23536101 atgtaatgttttgagggaattcaactactttgaggtgaattc 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32647335 - 32647388
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||||||| |||||||||||| || ||||||| |||||||||||||    
T  32647335 atgtattgttttgaggaaattcaaatactttggggtgaataccattgtttggat 32647388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37036988 - 37036935
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||| | ||| || |||||||||||| ||||    
T  37036988 atgtaatgttttgagggaattcaaatattttgatgtaaattccattgttcggat 37036935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 37446934 - 37446881
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  37446934 tagaattataaattcttcaaaatttcttaattaccccatccaaacacactctaa 37446881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41823195 - 41823146
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  41823195 aatgttttgaaggaattcaaataccttgagatgaattccattgtttggat 41823146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 4038198 - 4038150
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  4038198 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 4038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 21267388 - 21267340
Alignment:
Q  134 aaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    |||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  21267388 aaattctttaaaatttctcaattatctcatccaaacacactcttaggtt 21267340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 32128585 - 32128633
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||||||||||||  ||||||||| | ||||||||||||    
T  32128585 aattttaaattctttaaaatttctcaattacctcgttcaaacacactct 32128633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 39887166 - 39887214
Alignment:
Q  6 atgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||| | |||||||||||| ||| ||||||||||||||||||||    
T  39887166 atgttttgaagaaattcaaatactttgatgtgaattccattgtttggat 39887214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 23969497 - 23969438
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactcta 177  Q
    ||||||||| |||||||||||||||||||  |   ||||||| |||||||||||||||||    
T  23969497 aattgcttataattttaaattctttaaaaaatttcaattaccccatccaaacacactcta 23969438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 220644 - 220702
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| |||||||| || |||||   ||||||||||||||||||||||||    
T  220644 aattgcctagaattctaaattctctataatttttcaattacctcatccaaacacactct 220702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 15245480 - 15245526
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  15245480 aatgttttgagggaattcaactactttaaggtgaattctattgtttg 15245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 24273260 - 24273226
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  24273260 aatgtaatgttatgagggaattcaaatactttgag 24273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31195490 - 31195540
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||| ||||| |||| ||||| | |||||||||||||||||||||    
T  31195490 atgtaatgttctgaggaaatttaaatattttgaggtgaattccattgtttg 31195540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32287972 - 32287918
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccatt-gtttggat 54  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||| ||||||||    
T  32287972 atgtaatgttttgaggaaattcaaatactttgaagtgaaatccattagtttggat 32287918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 37214939 - 37214894
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||    
T  37214939 aatgttttgagggaattcaactact-tgaggtgaattctattgtttg 37214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 37448022 - 37447968
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||||||| ||||||| | ||||||||  ||||||| |||||||||||||||||||    
T  37448022 tagaattctaaattcatcaaaatttctcaattaccccatccaaacacactctaag 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 40264068 - 40264114
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttg 40264114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50005113 - 50005163
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||| |||||||| | || |||||||||||| ||||||||    
T  50005113 atgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttg 50005163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 50471791 - 50471837
Alignment:
Q  8 gttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||| | |||||||||  |||||||||||    
T  50471791 gttttgagggaattcaaatactttcaggtgaattttattgtttggat 50471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4038109 - 4038146
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  4038109 atgtaatgttttgagggaattcaactactttgaggtga 4038146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 31166718 - 31166763
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||||||| ||||||  |||||||| |||||||||||||||||    
T  31166718 taaattctttacaatttctcaattacctgatccaaacacactctaa 31166763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 37447477 - 37447424
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||||| ||||||||  || ||| |||||||||||||||||||    
T  37447477 tagaattctaaattcttcaaaatttctcaaatacttcatccaaacacactctaa 37447424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38277449 - 38277498
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||| ||||||||| |||| |||||||||||  |||||||    
T  38277449 atgtaatgttttgaaggaattcaactactttgaggtgaattatattgttt 38277498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 41822131 - 41822078
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacac 171  Q
    |||||| ||||||| |||||||| |||||||||  |||||| ||||||||||||    
T  41822131 aattgcctagaattctaaattctgtaaaatttctcaattacttcatccaaacac 41822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 44571697 - 44571738
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||||||| ||||||| |||||||||||| |||||||||    
T  44571697 taaattctttataatttcccaattacctcatcgaaacacact 44571738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45565428 - 45565477
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||||||||||| || | | |||||||||| |||||||    
T  45565428 atgtaatgttttgagggaattcaactattttaaggtgaattctattgttt 45565477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47820247 - 47820300
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| |  |||||||| ||||||||||||    
T  47820247 atgtattgttttaagggaattcaaatactttagggtgaatttcattgtttggat 47820300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 48953607 - 48953655
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  48953607 aatgttttgaaggaattcaaatatt-tgaggtgaattctattgtttggat 48953655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 49216373 - 49216324
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| ||||||||||||||||| |||||| |||| ||||||| ||||    
T  49216373 aatgtttcgagggaattcaaatactttgaggtaaatttcattgttgggat 49216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 6470280 - 6470228
Alignment:
Q  125 tagaattttaaattctttaaaa-tttccaaattacctcatccaaacacactct 176  Q
    ||||||| |||||||||||||| ||||  |||| |||||||||||||||||||    
T  6470280 tagaattctaaattctttaaaaatttctcaattgcctcatccaaacacactct 6470228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 10166986 - 10167034
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatcca 166  Q
    |||||| |||||||||||||||||||||||||   |||||||| |||||    
T  10166986 aattgcctagaattttaaattctttaaaatttatcaattaccttatcca 10167034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 31196903 - 31196951
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||| ||||||||||||||||||  ||||| ||||||| ||||||||||    
T  31196903 aattctaaattctttaaaatttctcaattatctcatcctaacacactct 31196951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 41481002 - 41480954
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||| ||||||||  |  |||||||||||||||||||||||||    
T  41481002 aattttaaatgctttaaaaaatttaaattacctcatccaaacacactct 41480954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 45565515 - 45565479
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatt 45565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 5e-78; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 25935326 - 25935147
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  25935326 atgtaatgttatgaggaaattcaaatactttgaggtgaattccattgtttggatgggggaatgtaatgtaatgttaatgaaatgtaatgttatgagggaa 25935227  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25935226 ttcaaatactttgagataattgcctagaattttaaattctttaaaatttctaaattacctcatccaaacacactctaagg 25935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37722930 - 37722754
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  37722930 atgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggatgggggaatgtaatgtaatgttgaggaaatgtagtgttatgagggaa 37722831  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||| | |||| | ||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  37722830 ttcaaatactttgaggtaaattacctagaattttaaattctttaaaatttccaaattactcaatccaaacacactct 37722754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19533943 - 19533764
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| || |||||||||||| ||| |||||||    
T  19533943 atgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggatgggggaatgtaatgtaatcttgaggaaatgtaatattacgagggaa 19533844  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||||  |||||| | |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  19533843 ttcaaatattttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcattcaaacacactataag 19533764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 12064500 - 12064313
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaat----------gtaatgtaatgttaaggaaatgtaatgttatg 94  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||          ||||||||||||| ||||||||||||||||||    
T  12064500 aatgttttgagggaatttaaatactttgaggtgaatttcattgtttggatggggaaatataatgtaatgtaatgtaatgttgaggaaatgtaatgttatg 12064401  T
Q  95 agggaattcaaatgctttgagataa-ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggt 181  Q
     |||||||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12064400 tgggaattcaaatactttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggt 12064313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 37145537 - 37145395
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||    
T  37145537 atgtaatgttatgagagaattcaaatactttgaggtgaatttcattgtttggatgagggaatgtaatgtaatgttaagaaaatgtaatgctatgagggaa 37145438  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattcttta 143  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  37145437 ttcaaatactttgagataattgcctagaattttaaattcttta 37145395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 20320621 - 20320529
Alignment:
Q  85 taatgttatgagggaattcaaatgctttgagataa-ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| |||| ||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20320621 taatgtaatgaaggaattcaaatactttgaggtaaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 20320529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 13391020 - 13390962
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  13391020 aattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacactct 13390962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 32249707 - 32249646
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  32249707 aattgcctagaattctaaattctttaaaattttcaaattacctcatccaaacacactctaag 32249646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 12480391 - 12480449
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  12480391 aattgcttagaattctaaattctttaaaattttccaattacctcatccaaacacactct 12480449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 33146211 - 33146260
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33146211 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 33146260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40090450 - 40090397
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  40090450 atgtaatgttttgatggaattcaaatactttgaggtgaattccattgtttggat 40090397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 28490031 - 28490079
Alignment:
Q  6 atgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttggat 28490079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 40089455 - 40089407
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactctaaggt 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40089455 taaattctttaaaatttcctaattacctcatccaaacacactctaaggt 40089407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 41761802 - 41761738
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    |||||| || |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  41761802 aattgcctaaaattctaaattctttaaaatttctcaattacctcatccaaacacactctaaggtt 41761738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 6771881 - 6771823
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  6771881 aattgcatagaattctaaattctttaaaatttcccaattaactcatccaaacacactct 6771823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 15270886 - 15270840
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15270886 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 15270840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 17542393 - 17542347
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  17542393 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 17542347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 927336 - 927389
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  927336 atgtattgttttgagggaattcaaatactttggggtgaattccattgtttggat 927389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 17492679 - 17492630
Alignment:
Q  6 atgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttggatg 17492630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22305132 - 22305181
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22305132 aatgttttgagggaattcaactactttgaggtgaattccattgtttggat 22305181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 32250132 - 32250081
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  32250132 gtaatgttttgagggaattcaaataccttgagatgaattccattgtttggat 32250081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 22766989 - 22767039
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||    
T  22766989 taatgttttgagggaattcaaatactttaaggtgaattctattgtttggat 22767039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 927799 - 927852
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  927799 tagaattctaaattctttaaaatttctcaattacctcattcaaacacactctaa 927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9894358 - 9894305
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||   |||||||||||||||| ||||||||||||||||||||||||    
T  9894358 atgtaatgttaccagggaattcaaatactttgaggtgaattccattgtttggat 9894305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14834858 - 14834911
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||    
T  14834858 atgtaatgttttaagggaatccaaatactttgaggtgaatttcattgtttggat 14834911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20320684 - 20320623
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaat 62  Q
    ||||||| |||| |||||||||||||||| ||  |||||||||||||||||||||||| |||    
T  20320684 atgtaatattttaagggaattcaaatactttggtgtgaattccattgtttggatgggggaat 20320623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 22304792 - 22304731
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||| ||| ||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  22304792 aattgcctaggattctaaattctttaaaatttcccaattacctcatcaaaatacactctaag 22304731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 35111709 - 35111766
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    ||||||| ||||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  35111709 tagaattctaaattctttaaaatttctcaattaccccatccaaacacactcttaggtt 35111766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 37241142 - 37241093
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  37241142 aatgttttcagggaattgaaatactttgaggtgaattccattgtttggat 37241093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41762251 - 41762198
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  41762251 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 41762198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 15580050 - 15579998
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaatta-cctcatccaaacacactct 176  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  15580050 tagaattttaaattttttaaaatttcctaattaccctcatccaaacacactct 15579998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 22304681 - 22304729
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  22304681 tagaattctaaattctttaaaatttctcaattacctcatccaaacacac 22304729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 15270468 - 15270413
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||||||| |||||||    
T  15270468 tagaattctaaattctttaaaattttccaattacctcattcaaacacattctaagg 15270413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 17541927 - 17541884
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  17541927 taaattctttaaaatttctcaattacctcatccaaacacactct 17541884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22303906 - 22303855
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||    
T  22303906 atgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgg 22303855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 37145362 - 37145397
Alignment:
Q  143 aaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||||||||||||||||||||||||||||||||    
T  37145362 aaaatttccaaattacctcatccaaacacactctaa 37145397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15374085 - 15374035
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  15374085 atgtaatgttttgagggaattcaactactctaaggtgaattctattgtttg 15374035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20523258 - 20523208
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  20523258 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 20523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 32317167 - 32317224
Alignment:
Q  120 ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| |||||||||||||||||||||| | |||||||| |||||||||| ||||||    
T  32317167 ttgcttaaaattttaaattctttaaaattttc-aattacctaatccaaacactctctaa 32317224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8255061 - 8255113
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||| | | ||||||||| ||||||||||||    
T  8255061 atgtaatgttttgagggaattcaaata-ttttaggtgaatttcattgtttggat 8255113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12479941 - 12479990
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||| ||||||||| |||||||||||| ||||||||||| ||||||||    
T  12479941 atgtaaagttttgaggaaattcaaatactttgaggtgaatttcattgttt 12479990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15373994 - 15374035
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  15373994 atgtaatgttttgagggaattcaactactttgaggtgaattc 15374035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 28489505 - 28489546
Alignment:
Q  9 ttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  28489505 ttttgagagaattcaaatactttgaggtgaattccattgttt 28489546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32390097 - 32390056
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  32390097 atgtaatgttttgagggaattcaactactttgaggtgaattc 32390056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 9764374 - 9764422
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  9764374 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 9764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 28489953 - 28490009
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||| ||| ||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  28489953 aattgcctaggattctaaattccttaaaattttctaattacctcatccaaacacact 28490009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 28490397 - 28490460
Alignment:
Q  118 aattgcttagaattttaaattctttaaaa---tttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| | ||||||||||||||||||||   ||||  ||||||||||||||||||||||||||||    
T  28490397 aattgccttgaattttaaattctttaaaaaaatttc--aattacctcatccaaacacactctaagg 28490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37241638 - 37241598
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  37241638 atgtaatgttttgagggaattcaaatactttgagctgaatt 37241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2721596 - 2721557
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaat 40  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  2721596 atgtaatgttttgagggaattcaactactttgaggtgaat 2721557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3563311 - 3563357
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattg 47  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||    
T  3563311 atgtaatgttttgagggaattcaactactttaaggtgaattctattg 3563357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 19533944 - 19533910
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  19533944 aatgtaatgttatgagggaattcaaatactttgag 19533910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35379377 - 35379431
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||||||||||||||||||||| || ||| |||||||  |||| |||||||    
T  35379377 atgtaatgttttgagggaattcaaattctttgaagtgaattttattgattggatg 35379431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 37091093 - 37091135
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  37091093 taaattctttaagatttaccaattacctcatccaaacacactc 37091135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 38178863 - 38178813
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaa 168  Q
    |||||| || |||| ||||||||||||||||| | ||||||||||||||||    
T  38178863 aattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 38206087 - 38206037
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaa 168  Q
    |||||| || |||| ||||||||||||||||| | ||||||||||||||||    
T  38206087 aattgcctataattctaaattctttaaaattttccaattacctcatccaaa 38206037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2316504 - 2316463
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    ||||||||||||||| |||||||| |||| ||||||||||||    
T  2316504 atgtaatgttttgagagaattcaactactttgaggtgaattc 2316463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 6772245 - 6772195
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||| |||||||||| ||||||||  ||||||||| |||||||||||||    
T  6772245 gtaatgttatgagggaatttaaatactg--aggtgaatttcattgtttggatg 6772195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9764463 - 9764426
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  9764463 atgtaatgttttgagggaattcaactactttgaggtga 9764426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10314683 - 10314736
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||| |||||||||||||| | ||| |||||||| |||||||||||    
T  10314683 atgtaatattttaagggaattcaaatattttgatgtgaattctattgtttggat 10314736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 14835297 - 14835338
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||||||||||||||| |||||| | |||||||||||||    
T  14835297 taaattctttaaaatttcccaattactttatccaaacacact 14835338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16515143 - 16515102
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  16515143 atgtaatgttttgagggaattcaacttctttgaggtgaattc 16515102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26281305 - 26281264
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  26281305 atgtaatgttttgagggaattcaactactttaaggtgaattc 26281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32471007 - 32470966
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  32471007 atgtaatgttttgagggaattcaactactttgagttgaattc 32470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 33995502 - 33995441
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| || |||| ||| |||||||||||||   |||||| ||||||||||||||||||||    
T  33995502 aattgcctaaaattctaatttctttaaaatttgtcaattacatcatccaaacacactctaag 33995441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34105109 - 34105158
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||  |||||||||||| |||| |||||| ||||||||||||    
T  34105109 aatgttttgagaaaattcaaatactttgagatgaatttcattgtttggat 34105158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35111260 - 35111313
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||| | ||| |||| ||| |||||||||||    
T  35111260 atgtaatgttttgaaggaattcaaatattttgatgtgagttctattgtttggat 35111313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 2550348 - 2550384
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  2550348 aatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 17492731 - 17492691
Alignment:
Q  134 aaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  17492731 aaattttttaaaattttctaattacctcatccaaacacact 17492691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 22302557 - 22302609
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtga-ggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||||||   | || ||||||||||||||||||    
T  22302557 gtaatgttttgagggaattcaaatacttaaaaggcgaattccattgtttggat 22302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 31367932 - 31367976
Alignment:
Q  11 ttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||| ||| |||| ||||||| ||||||||||||    
T  31367932 ttgagggaattcaaacactttgagatgaattctattgtttggatg 31367976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 37090320 - 37090368
Alignment:
Q  6 atgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||| |||||||||| | | | ||||||||||||||||||||    
T  37090320 atgttttgaggaaattcaaatatttttatgtgaattccattgtttggat 37090368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 5e-75; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 23011768 - 23011946
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  23011768 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggatgggggaatttaatgtaatgttaaggaaatgtaatgttatgagggaa 23011867  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatcc-aaacacactctaa 178  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  23011868 ttcaaatactttgagataattgcctagaattttaaattctttaaaatttctaaattacctcatccaaaacacactctaa 23011946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 30444978 - 30444802
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaattca 104  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| || ||||||||    
T  30444978 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggatggtggaatgtaatgtaatattaaggaaatgtaatgttaggaaggaattca 30444879  T
Q  105 aatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||| ||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30444878 aatactttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacttcatccaaacacactctaagg 30444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 36103135 - 36103308
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||||| ||| |||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||| | ||    
T  36103135 atgtaatgttttaaggaaattcaaatactttgatgtgaattgcattgtttggatgggggaatgtaatgtaatattgaggaaatgtaatgttatgaagaaa 36103234  T
Q  101 ttcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||||  |||  |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36103235 ttcaaatattttaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacact 36103308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 515581 - 515475
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  515581 atgtaatgttttaagggagttcaaatactttgatgtgaatttcattgtttggatgggggaatgtaatgtaatattgaggaaatgtaatgttatgaaggaa 515482  T
Q  101 ttcaaat 107  Q
    |||||||    
T  515481 ttcaaat 515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 21465610 - 21465548
Alignment:
Q  13 gagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgtt 75  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||    
T  21465610 gagggaattcaaatactttgaggttaattccattgtttggatgggggaatgcaatgtaatgtt 21465548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13144617 - 13144670
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  13144617 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 13144670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 26520484 - 26520435
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26520484 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 26520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34008819 - 34008868
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34008819 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 34008868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 43185478 - 43185532
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  43185478 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 43185532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 44346279 - 44346221
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  44346279 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 44346221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 44889391 - 44889441
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44889391 taatgttttgagggaattcaaatactttgatgtgaattccattgtttggat 44889441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 14729 - 14790
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||    
T  14729 aattgcctagaattctaaattctttaaaatttctcaatttcctcatccaaacacactctaag 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 29611408 - 29611457
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  29611408 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttggat 29611457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 31980104 - 31980047
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  31980104 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactc 31980047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 13145075 - 13145131
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  13145075 aattgcctagaattttaaattctttaaattttcccaattacctcacccaaacacact 13145131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 33986488 - 33986552
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    |||||| |||||||   ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  33986488 aattgcctagaattccgaattctttaaaatttctcaattacctcatccaaacacactctaaggtt 33986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 40733693 - 40733641
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaaca 170  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  40733693 aattgcctagaattttaaattctttaaaatttctcaattacctcatccaaaca 40733641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24044994 - 24045045
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  24044994 atgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttgg 24045045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 29482850 - 29482803
Alignment:
Q  7 tgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  29482850 tgttttgagggaattcaaatactttggggtgaattccattgtttggat 29482803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 33376880 - 33376825
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||||||||    
T  33376880 tagaattctaaattctttaaaatttatcaattacctcatccaaacacactctaagg 33376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 33377340 - 33377293
Alignment:
Q  7 tgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  33377340 tgttttgagggaattcaaatactttggggtgaattccattgtttggat 33377293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 35978643 - 35978592
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  35978643 tagaattttaaattctttaaaatttctcaattgcctcatccaaacacactct 35978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8049291 - 8049341
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  8049291 taatgttttgagggaattcaaatactttgaggtaaatttcattgtttggat 8049341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 9983139 - 9983197
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||| |||||||| ||||||||| ||||||||  ||||||||||||||||||||||||    
T  9983139 aattgattagaattctaaattcttcaaaatttctcaattacctcatccaaacacactct 9983197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 29256971 - 29256913
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  29256971 aattgcctagaattctaaattctttaaaatttctcaattacctcgtccaaacacactct 29256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 10593564 - 10593620
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  10593564 aattgcctagaattttaaatt-tttaaaatttctcaattacctcatccaaacacactc 10593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29257400 - 29257347
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  29257400 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 29257347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 31976723 - 31976666
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||| ||||||    
T  31976723 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaaaacactc 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33986038 - 33986087
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  33986038 atgtaatgttttgagagaattcaaatactttgaggtgaatttcattgttt 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 35979041 - 35979000
Alignment:
Q  13 gagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  35979041 gagggaattcaaatactttgaggtgaattccattgtttggat 35979000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44346727 - 44346674
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  44346727 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 44346674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 29482389 - 29482341
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  29482389 aattctaaattctttaaaatttctcaattacctcatccaaacacactct 29482341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3853650 - 3853700
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  3853650 atgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttg 3853700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3858108 - 3858158
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  3858108 atgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttg 3858158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17110994 - 17110944
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  17110994 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 17110944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 29611814 - 29611872
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| || |||| ||||||||||||||||| | ||||||| ||||||||||||||||    
T  29611814 aattgcctaaaattctaaattctttaaaattttccaattaccacatccaaacacactct 29611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14272 - 14321
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||| |||||||||||||||| || |||||||| ||||||||    
T  14272 atgtaatgttttaagggaattcaaatactttggggtgaatttcattgttt 14321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 8469535 - 8469584
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||| | || | ||||||||||||||||||||||    
T  8469535 aatgttttgagggaattcaagtcctattaggtgaattccattgtttggat 8469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9982670 - 9982719
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  9982670 atgtaatgttttgagagaatttaaatattttgaggtgaattccattgttt 9982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28324711 - 28324658
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  |||| |||||| ||||||||||||    
T  28324711 atgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttggat 28324658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 26520040 - 26519984
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||| |||||||||||||||||||||||||   |||||| | |||||||||||||    
T  26520040 aattgcctagaattttaaattctttaaaatttatcaattactttatccaaacacact 26519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 1087894 - 1087843
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||| ||||||||||||||||||  ||||||||||| |||||| ||||||||    
T  1087894 aattctaaattctttaaaatttctcaattacctcattcaaacatactctaag 1087843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 13144615 - 13144650
Alignment:
Q  80 aaatgtaatgttatgagggaattcaaatgctttgag 115  Q
    |||||||||||||||||||||||||||| |||||||    
T  13144615 aaatgtaatgttatgagggaattcaaatactttgag 13144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4156292 - 4156242
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | || ||||||| ||||||||    
T  4156292 atgtaatgttttgagggaattcaactactttaagatgaattctattgtttg 4156242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 7079787 - 7079825
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcat 163  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  7079787 tagaattttaaattctttaaaatttctcaattacctcat 7079825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 7669142 - 7669188
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||||||| |||||||  ||||||| |||||||||||||||||||    
T  7669142 taaattctttgaaatttctcaattaccccatccaaacacactctaag 7669188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13404952 - 13404902
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||| ||||||  ||||||||    
T  13404952 atgtaatgttttgagggaattcaactactttgagatgaattttattgtttg 13404902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 23011767 - 23011801
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  23011767 aatgtaatgttatgagggaattcaaatactttgag 23011801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1088326 - 1088273
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||||||| |||||||||| | || ||| |||||||||||||||||    
T  1088326 atgtattgttttgaggaaattcaaatattttggggtaaattccattgtttggat 1088273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17110903 - 17110944
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  17110903 atgtaatgttttgagggaattcaactactttgagttgaattc 17110944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31976631 - 31976578
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||| ||||||| |||||||||| | |||| |||||| ||||||||||||    
T  31976631 atgtaatgctttgaggaaattcaaatattttgagatgaatttcattgtttggat 31976578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31980532 - 31980479
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||||| | || |||||||| |||| |||||||    
T  31980532 atgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggat 31980479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35404791 - 35404738
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||||||| |||||||||||| |||||||||||  | |||||||||    
T  35404791 atgtaatattttgaggaaattcaaatactttgaggtgaattttactgtttggat 35404738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42711405 - 42711364
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  42711405 atgtaatgttttgagggaattcaactactttgagttgaattc 42711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 7202885 - 7202921
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  7202885 aatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 36624868 - 36624808
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||| ||||||||| ||||||||| ||||||||  ||||| | |||| |||||||||||||    
T  36624868 aattccttagaattctaaattcttcaaaatttctcaattatcccatctaaacacactctaa 36624808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 19475850 - 19476026
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  19475850 atgtaatgttatgaggtaattcaaatactttgaggtgaattccattgtttggatgggagaatgtaatgtaatgttgaggaaatgtaatgttatgagggaa 19475949  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19475950 ttcaaatactttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 19476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 8762160 - 8762336
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||||||||    
T  8762160 atgtaatgttatgagggaattcaaatactttgatgtgaattccattgtttggatgggagaatgtaatgtaatgttgagaaaatgtaatgttatgagggaa 8762259  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8762260 ttcaaatactttgagataaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactct 8762336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 54761598 - 54761423
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaattca 104  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||| || ||||||||||||| || ||||||||||||||||||| ||||||||    
T  54761598 aatgttttgagggaattcaaatactttgatgtaaattccattgtttggatgagggaatgtaatgtaatattgaggaaatgtaatgttatgaaggaattca 54761499  T
Q  105 aatgcttt-gagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||| ||||  ||  |||||  || ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  54761498 aatactttaaagtaaattgtctaaaattttaaattctgtaaaattttcaaattacctcatccaaacacactctaag 54761423  T

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Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 33871892 - 33871762
Alignment:
Q  49 ttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaattcaaatgctttgagataa-ttgcttagaattttaaattctttaaaat 147  Q
    |||||||||| |||||||||||||||| ||||||  |||||||| |||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||    
T  33871892 ttggatgggggaatgtaatgtaatgttgaggaaacataatgttacgagggaattcaaatactttgaggtaaattgcctagaattttaaattctttaaaat 33871793  T
Q  148 ttccaaattacctcatccaaacacactctaa 178  Q
    ||||||||||||||||||| |||||||||||    
T  33871792 ttccaaattacctcatccacacacactctaa 33871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 47714307 - 47714490
Alignment:
Q  5 aatgttttgagggaattcaaatactgt-gaggtgaattccattgtttggatggggaaatgtaatgtaatgt--------taaggaaatgtaatgttatga 95  Q
    ||||||||||||||||||||||||| | || ||||||| ||||||||||||| || ||||||||||||| |        | |||||||||||||||||||    
T  47714307 aatgttttgagggaattcaaatacttttgatgtgaatttcattgtttggatgagggaatgtaatgtaatatactaatattgaggaaatgtaatgttatga 47714406  T
Q  96 gggaattcaaatgctttgagataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
     ||||||||||| ||| |  | |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47714407 aggaattcaaatacttaggta-aattgcctagaatttgaaattctttaaaatttccaaattacctcatccaaacacactctaagg 47714490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21307570 - 21307517
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21307570 atgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 21307517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 35279528 - 35279468
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  35279528 aattacttagaattctaaattctttaaaatttcccaattgcctcatccaaacacactctaa 35279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 21307159 - 21307110
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactcta 177  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21307159 aattctaaattctttaaaatttcccaattacctcatccaaacacactcta 21307110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30766587 - 30766640
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  30766587 atgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggat 30766640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 34089067 - 34089128
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||    
T  34089067 aattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactctaag 34089128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53129881 - 53129828
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  53129881 atgtaatgttttaagggaattcaaatactttggggtgaattccattgtttggat 53129828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 7977058 - 7977102
Alignment:
Q  134 aaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  7977058 aaattctttaaaatttcccaattacctcatccaaacacactctaa 7977102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 671236 - 671185
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  671236 aattttatattctttaaaatttctcaattacctcatccaaacacactctaag 671185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 36397562 - 36397511
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  36397562 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 36397511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 43863537 - 43863482
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  43863537 tagaattctaaattctttaaaatttctcaattacctcgtccaaacacactctaagg 43863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 53470002 - 53469951
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  53470002 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 53469951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 28181856 - 28181794
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  28181856 aattgcctagaattctaaattctttaaaattttccaattacctcgtccaaacacactataagg 28181794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31070440 - 31070490
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  31070440 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 31070490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 34396202 - 34396148
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacaca 172  Q
    |||||| |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  34396202 aattgcctagaattttaaactctttaaaattttccaattacctcatccaaacaca 34396148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 38506910 - 38506864
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  38506910 aatgttttgagggaattcaaataatttgaggtgaattccattgtttg 38506864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 52527507 - 52527561
Alignment:
Q  124 ttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||||| |||||| |||||||||| | ||||||||||||||||||||||||||    
T  52527507 ttagaattctaaattttttaaaattttccaattacctcatccaaacacactctaa 52527561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7302380 - 7302433
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||||||||||    
T  7302380 atgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttggat 7302433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 24241754 - 24241705
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  24241754 taaattctttaaaatttctcaattacctcatccaaacacactcttaggtt 24241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34088605 - 34088658
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||| ||||    
T  34088605 atgtattgttttgagggaattcaaatactttggggtgaattccattgttaggat 34088658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36398027 - 36397974
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||| ||||    
T  36398027 atgtattgttttgagggaattcaaatactttggggtgaattccattgttcggat 36397974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47767466 - 47767519
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||    
T  47767466 atgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttggat 47767519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48947639 - 48947692
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||| ||||||||||||| || |||||||||||||||||||||    
T  48947639 atgtattgttttgagagaattcaaatactttggggtgaattccattgtttggat 48947692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 21731410 - 21731470
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| |||||||||||||||| | ||||||   ||||||||||||||||||||||||||    
T  21731410 aattgcctagaattttaaattctcttaaatttatcaattacctcatccaaacacactctaa 21731470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 671657 - 671606
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    ||||| ||||||||||||||||| ||||| || |||||||||||||||||||    
T  671657 atgtattgttttgagggaattcagatactttggggtgaattccattgtttgg 671606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37054428 - 37054479
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||    
T  37054428 atgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgg 37054479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 53470461 - 53470414
Alignment:
Q  7 tgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  53470461 tgttttgagggaattcaaatactttggggtgaatttcattgtttggat 53470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13176600 - 13176546
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||    
T  13176600 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttggatg 13176546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 48948073 - 48948131
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| |||||||||||||||||   |||||||||||||||||| |||||    
T  48948073 aattgcctagaattctaaattctttaaaatttttcaattacctcatccaaacatactct 48948131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 2104772 - 2104821
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| ||||||||||||||||| ||| |||||||| |||||||||||    
T  2104772 aatgtttcgagggaattcaaatactttgatgtgaattctattgtttggat 2104821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7976582 - 7976635
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||| ||||||  |||||||||||| |||||||||||    
T  7976582 atgtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttggat 7976635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9129469 - 9129428
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  9129469 atgtaatgttttgagggaattcaactactttgaggtgaattc 9129428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9137576 - 9137535
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  9137576 atgtaatgttttgagggaattcaactactttgaggtgaattc 9137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26323394 - 26323443
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  26323394 aatgttttgaggtaattcaaatacttttaggtgaattccgttgtttggat 26323443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27252019 - 27251978
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  27252019 atgtaatgttttgagggaattcaactactttgaggtgaattc 27251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 38506542 - 38506481
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| || |||| ||||||||||||||||| | |||||| |||| |||||||||||||||    
T  38506542 aattgcctaaaattctaaattctttaaaattttccaattacttcattcaaacacactctaag 38506481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44436383 - 44436342
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  44436383 atgtaatgttttgagggaattcaactactttgaggtgaattc 44436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44692947 - 44692906
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  44692947 atgtaatgttttgagggaattcaactactttgaggtgaattc 44692906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46672841 - 46672800
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  46672841 atgtaatgttttgagggaattcaactactttgaggtgaattc 46672800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 645793 - 645741
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaaca 170  Q
    |||| ||| ||||| ||||||||||||||||| | ||||||||||||||||||    
T  645793 aattacttggaattctaaattctttaaaattttccaattacctcatccaaaca 645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 43863979 - 43863936
Alignment:
Q  10 tttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  43863979 tttgagggaattcaaatactttg-ggtgaattccattgtttggat 43863936  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46706684 - 46706739
Alignment:
Q  1 atgtaatgttttgagggaattc--aaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||| ||| ||||||  ||||||| ||||||||||||||||||||||||    
T  46706684 atgtaatgtttcgagagaattcttaaatactttgaggtgaattccattgtttggat 46706739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 50168231 - 50168191
Alignment:
Q  136 attctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  50168231 attctttaaaatttctcaattacctcatccaaacacactct 50168191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 156
Target Start/End: Original strand, 19475745 - 19475776
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaatt 156  Q
    ||||||||||||||||||||||||||||||||    
T  19475745 tagaattttaaattctttaaaatttccaaatt 19475776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42005991 - 42005940
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||||||| |||||| ||||||  ||||||||||| ||||||||||    
T  42005991 atgtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttgg 42005940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 48824692 - 48824637
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    |||||| || |||| ||||||||||||||||| | |||||||| ||||||||||||    
T  48824692 aattgcctaaaattctaaattctttaaaattttccaattaccttatccaaacacac 48824637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52527070 - 52527121
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||| ||  |||||||||||||| |||||| |||||||||||||||    
T  52527070 atgtaatgttatggaggaattcaaatactttgaggtaaattccattgtttgg 52527121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13339501 - 13339447
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||| ||||||||| ||| | ||||| |||| ||||||||||||    
T  13339501 atgtaatgttttgagagaattcaaagacttttaggtggattctattgtttggatg 13339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 46429434 - 46429480
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttg 46429480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 47284233 - 47284191
Alignment:
Q  9 ttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||| |||  ||||||||||||||||    
T  47284233 ttttgagggaattcaaatactttgatatgaattccattgtttg 47284191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 55460378 - 55460428
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||||||||||||||||||||   | ||||||||||| |||||||||    
T  55460378 aatgttttgagggaattcaaatacttgtaagtgaattccatcgtttggatg 55460428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 332012 - 332049
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 332096 - 332051
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||||||| |||| | |||||||||| |||||||    
T  332096 aatgttttgagggaattcaactactttaaggtgaattctattgttt 332051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 2105228 - 2105281
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||||| ||||||||  ||||||  ||||||||||||||||||    
T  2105228 tagaattataaattcttcaaaatttctcaattactccatccaaacacactctaa 2105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 8762159 - 8762192
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttga 114  Q
    ||||||||||||||||||||||||||| ||||||    
T  8762159 aatgtaatgttatgagggaattcaaatactttga 8762192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 9007489 - 9007440
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||  ||||||||||||| | ||||||||| ||||||||||||    
T  9007489 aatgttttgaacgaattcaaatacttttaggtgaatttcattgtttggat 9007440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28092248 - 28092289
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  28092248 atgtgatgttttgagggaattcaattactttgaggtgaattc 28092289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 28182275 - 28182234
Alignment:
Q  12 tgagggaattcaaatactgtgaggtgaattccattgtttgga 53  Q
    |||||||||||||||||| |||||||||||  ||||||||||    
T  28182275 tgagggaattcaaatactttgaggtgaattttattgtttgga 28182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50168648 - 50168595
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||| || ||||||| | | || |||||||||||||||||||    
T  50168648 atgtaatgttttgaggaaactcaaataattttagctgaattccattgtttggat 50168595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 5415906 - 5415858
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||| ||||||||| |||| | |||||||||| ||||||||    
T  5415906 gtaatgttttgatggaattcaactactttaaggtgaattctattgtttg 5415858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 28092155 - 28092206
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaaca 170  Q
    |||||| |||||||| |||||||||||||||| | ||||| ||||||||||||    
T  28092155 aattgcctagaattt-aaattctttaaaattttccaattagctcatccaaaca 28092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31189435 - 31189395
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    ||||||||||||||| ||||||||||||| |||||| ||||    
T  31189435 atgtaatgttttgagagaattcaaatactttgaggtaaatt 31189395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 44288072 - 44288024
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||| |||||| || ||||||||| ||||||||| ||||||||||||||    
T  44288072 aattataaatttttcaaaatttcctaattacctcgtccaaacacactct 44288024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 44692858 - 44692906
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||||  ||| | |||||||||| ||||||||    
T  44692858 gtaatgttttgagggaattcaaccactttaaggtgaattctattgtttg 44692906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 10633066 - 10633243
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  10633066 atgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggatggggaa-tgtaatgtaatgttgaggaaatgtaatattatgagggaa 10633164  T
Q  101 ttcaaatgctttgagataa-ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10633165 ttcaaatactttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 10633243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 21012611 - 21012437
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaattca 104  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  21012611 aatgttttgagggaatttaaatattttgaggtgaattccattgtttagatgggggaatgtaatgtaatgttgaggaaatgtaatgttatgagggaattca 21012512  T
Q  105 aatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||  |||||| | |||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  21012511 aatattttgaggtaaattgtctagaattttaaattctttaaaatttttaaattacctcatccaaacacactctaa 21012437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31473883 - 31474059
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| |||||||||||  |||||||||||| |  |||||||||||||||| ||||||||||||||||||| ||||    
T  31473883 atgtaatgttatgagggaattcaaatactttgaggtgaattttattgtttggatgagagaatgtaatgtaatgttgaggaaatgtaatgttatgacggaa 31473982  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||  |||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31473983 ttcaaataatttgaggtaaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 31474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 46242680 - 46242620
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  46242680 aattgcttagaattataaattctttaaaatttcccaattacctcatccaaacacactctaa 46242620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 3803726 - 3803777
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3803726 aattttaaattctttaaaattttcaaattacctcatccaaacacactctaag 3803777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 40547826 - 40547768
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40547826 aattgcctagaattttaaattctttaaaatttctcaattacctcatccaaacacactct 40547768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1539675 - 1539728
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  1539675 atgtaatgttttgagggaattcaaatactttgaggtgaatttcattgtttggat 1539728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 41139962 - 41140023
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||||||||||||||||||||||||||||||  |||||| || |||||||||||||||||    
T  41139962 aattgcttagaattttaaattctttaaaatttctcaattacttcttccaaacacactctaag 41140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 42775643 - 42775692
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42775643 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 42775692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 30303610 - 30303668
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  30303610 aattgcctagaattttaaattctttaaaatttctcaattatctcatccaaacacactct 30303668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2125891 - 2125944
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  2125891 atgtattgttttgagggaattcaaatactttggggtgaattccattgtttggat 2125944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29091171 - 29091224
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  29091171 atgtaatgttttgagggaattcaaatactttgatgtgaattctattgtttggat 29091224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35470156 - 35470209
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  35470156 atgtattgttttgagggaattcaaatactttggggtgaattccattgtttggat 35470209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 42775831 - 42775775
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggt 181  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  42775831 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactcttaggt 42775775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 21782470 - 21782521
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  21782470 tagaattctaaattctttaaaatttcacaattacctcatccaaacacactct 21782521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 42776575 - 42776630
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    |||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||    
T  42776575 aattgcttaggattctaaattctttaaaattttccaattacctcatccaaacacac 42776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 47108710 - 47108765
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  47108710 aattgcctagaattctaaattctttaaaattttccaattacctcatccaaacacac 47108765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 2126328 - 2126386
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  ||||||| ||||||||||||||||    
T  2126328 aattgcctagaattctaaattctttaaaatttctcaattaccccatccaaacacactct 2126386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 35470614 - 35470672
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  35470614 aattgcctagaattctaaattctttaaaatttctcaattacatcatccaaacacactct 35470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16300258 - 16300209
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  16300258 atgtaatgttttgagaaaattcaaatactttgaggtgaattccattgttt 16300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 17727103 - 17727152
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  17727103 aatgttttgtgggaattcaaatactttgaggtgaatttcattgtttggat 17727152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26534527 - 26534580
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||  |||||||| |||||||||||    
T  26534527 atgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttggat 26534580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 27284278 - 27284221
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    |||||| ||||||| ||||||||||||||||| |||||||  ||||||||||||||||    
T  27284278 aattgcctagaattctaaattctttaaaattttcaaattatatcatccaaacacactc 27284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40338287 - 40338238
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  40338287 aatgttttgatggaattcaaatactttgaggtgaatttcattgtttggat 40338238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40548253 - 40548204
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||    
T  40548253 aatgttttgaggaaattcaaatactttggggtgaattccattgtttggat 40548204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41139507 - 41139560
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||| |||||||||||| | |||||||||| |||||||||||    
T  41139507 atgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttggat 41139560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 56339171 - 56339220
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  56339171 aatgttttgagggaattcaaatactttgatgtgaatttcattgtttggat 56339220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 54566673 - 54566725
Alignment:
Q  127 gaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  54566673 gaattttaaattcattaaaatttctcaattaccccatccaaacacactctaag 54566725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 857273 - 857323
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  857273 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4896757 - 4896715
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattcc 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  4896757 atgtaatgttttgagggaattcaactactttgaggtgaattcc 4896715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10128099 - 10128049
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  10128099 atgtaatgttttgagggaattcaactactttgagatgaattctattgtttg 10128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15660308 - 15660258
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  15660308 atgtaatgttttgagggaattcaactactttgagctgaattctattgtttg 15660258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 16516666 - 16516716
Alignment:
Q  126 agaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||| ||||||||  ||||||||||||||||||||||||    
T  16516666 agaattctaaattcttcaaaatttctcaattacctcatccaaacacactct 16516716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 28751802 - 28751740
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| || |||| |||||| |||||||||||  ||||| ||||||||||||||||||||||    
T  28751802 aattgcctataattctaaattttttaaaatttctcaattatctcatccaaacacactctaagg 28751740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42776671 - 42776725
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    |||||||||||||||  |||||||||||| | ||||||||| |||||||||||||    
T  42776671 atgtaatgttttgagtaaattcaaatacttttaggtgaatttcattgtttggatg 42776725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16516205 - 16516258
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||| ||||||| ||| ||||| ||||||||||||||    
T  16516205 atgtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttggat 16516258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 31947628 - 31947678
Alignment:
Q  2 tgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||||||||    
T  31947628 tgtaatgttacgagggaattcaaatactg--aggtgaattccattgtttggat 31947678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 46242580 - 46242531
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttgga 53  Q
    ||||||||||| |||||  ||||||| |||||||||||||||||||||||    
T  46242580 taatgttttgaaggaatcaaaatactttgaggtgaattccattgtttgga 46242531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 53760825 - 53760776
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||| | ||| |||||||| |||||||||||    
T  53760825 aatgttttgagggaattcaaatattttgatgtgaattctattgtttggat 53760776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 5716129 - 5716181
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaaca 170  Q
    |||||||||||||| ||||||| |  ||||||||||||||||| |||||||||    
T  5716129 aattgcttagaattctaaattcatcgaaatttccaaattaccttatccaaaca 5716181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 31948063 - 31948127
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggtt 182  Q
    |||||| || ||||||||||||||||||| || | ||||||||| ||||||| |||| |||||||    
T  31948063 aattgcctaaaattttaaattctttaaaagtttccaattacctcgtccaaacgcactgtaaggtt 31948127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 1107174 - 1107127
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  1107174 taatgttttgagggaattcaactactctaaggtgaattctattgtttg 1107127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 5579709 - 5579654
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    ||||| || ||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  5579709 aattgtttggaattttaaattcttcaaaattttctaattacctcattcaaacacac 5579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 36455944 - 36455991
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  36455944 taatgttttgagggaattcaactactttaaggtgaattctattgtttg 36455991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 10633065 - 10633099
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  10633065 aatgtaatgttatgagggaattcaaatactttgag 10633099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 19461324 - 19461266
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| || |||||||||||||||||||  | | ||||||||||| ||||||||||||    
T  19461324 aattgcctaaaattttaaattctttaaaaaattctaattacctcattcaaacacactct 19461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 26251030 - 26250984
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| |||||||||||| ||| ||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttg 26250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 27284697 - 27284651
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||| || ||||||||||||| ||||||||||| |||||||||    
T  27284697 aatgttttaagagaattcaaatactttgaggtgaatttcattgtttg 27284651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28845905 - 28845955
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||| |||||||||||| |||| | |||||||||| ||||||||    
T  28845905 atgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttg 28845955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 31473882 - 31473916
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  31473882 aatgtaatgttatgagggaattcaaatactttgag 31473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42844577 - 42844627
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||| |||||| ||||||||| |||| |||||||||||| ||||||||    
T  42844577 atgtaatattttgaaggaattcaactactttgaggtgaattctattgtttg 42844627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 43955081 - 43955047
Alignment:
Q  143 aaaatttccaaattacctcatccaaacacactcta 177  Q
    ||||||||| |||||||||||||||||||||||||    
T  43955081 aaaatttcccaattacctcatccaaacacactcta 43955047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 857364 - 857323
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| |||| |||||||    
T  857364 atgtaatgttttgagggaattcaactactttgagttgaattc 857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1112747 - 1112706
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    ||||||||||| |||||||||||| |||| ||||||||||||    
T  1112747 atgtaatgtttcgagggaattcaactactttgaggtgaattc 1112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11041088 - 11041039
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||| |||| |  ||||||||| |||||||||||    
T  11041088 aatgttttgagggaattcaactactttatggtgaattctattgtttggat 11041039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49111437 - 49111396
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  49111437 atgtaatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1112639 - 1112679
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    ||||||||||| |||||||||||| |||| |||||||||||    
T  1112639 atgtaatgtttcgagggaattcaactactttgaggtgaatt 1112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 6e-65; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 11532292 - 11532112
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgt--aatgttaaggaaatgtaatgttatgaggg 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  11532292 atgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggatgggggaatgtaatgtaaaatgttgaggaaatgtaatgttatgaggg 11532193  T
Q  99 aattcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||||| ||||||| | |||||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  11532192 aattcaaatactttgaggtaaattgcctagaattttaaattctttaaaacttccaaattatctcatccaaacacattctaa 11532112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 10480153 - 10480331
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||| |||    
T  10480153 atgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttggatgggagaatgtaatgtaatgttgaggaaatgtaatgctatgagagaa 10480252  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10480253 ttcaaatactttgaggtaaattgcctagaattttaaattctttaaaattttcaaattacctcatccaagcacactctaa 10480331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11793929 - 11794105
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||||||||| |||    
T  11793929 atgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggatgggataatgtaatgtaatgttgagaaaatgtaatgttatgagagaa 11794028  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||| | |||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  11794029 ttcaaatactttgaggtaaattgtctagaattttaaattctttaaaattttcaaattacctaatccaaacacactct 11794105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 7684482 - 7684656
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaattca 104  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||  |||||||    
T  7684482 aatgtttggagggaattcaaatactttggtgtgaattccattgtttagatgggggaatgtaatgtaatattgaggaaatgtaatgttatgaaagaattca 7684581  T
Q  105 aatgctttg-agataattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||| ||||| ||  ||| || || ||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  7684582 aatactttgaagtaaatggcctaaaattttaaattctttaaaatttttaaattaccttatccaaacacactctaa 7684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 7309494 - 7309434
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  7309494 aattgcttagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 7309434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 21504941 - 21504997
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  21504941 aattgcttagaattctaaattctttaaaatttcccaattacctcatccaaacacact 21504997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 2925142 - 2925209
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggttcat 185  Q
    |||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  2925142 aattgcctagaattctaaattctttaaaatttcccaattacttcatccaaacacactctaagtttcat 2925209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 8736023 - 8735965
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  8736023 aattgcttaggattctaaattctttaaaatttcccaattacctcatccaaacacactct 8735965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 39630717 - 39630779
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  39630717 aattgcctagaattttaaattttttaaaatttctcaattacctcatccaaacacactctaagg 39630779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 1583390 - 1583329
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  1583390 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaag 1583329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 8736476 - 8736427
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8736476 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 8736427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32839687 - 32839634
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32839687 atgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttggat 32839634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 769523 - 769583
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  769523 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 33188847 - 33188787
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  33188847 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 33188787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 11607257 - 11607304
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11607257 gtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 20935744 - 20935794
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20935744 aatgttttgagggaattcaaatactttgatgtgaattccattgtttggatg 20935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 32839246 - 32839188
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  32839246 aattgcctagaattttaaattctttaaaatttctcaattacctcatctaaacacactct 32839188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 35047259 - 35047201
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  35047259 aattgcctagaattttaaattctttaaaatttctcaattaccccatccaaacacactct 35047201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 3092744 - 3092797
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  3092744 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactctaa 3092797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13017813 - 13017866
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  13017813 atgtaatattttaagggaattcaaatactttgaggtgaattccattgtttggat 13017866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7167706 - 7167655
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttgg 52  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  7167706 atgtaatgttttgaaggaattcaaatactttgaggtgaatttcattgtttgg 7167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 8736510 - 8736561
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  8736510 tagaattttaaattctttaaaattttcaaataacctcatccaaatacactct 8736561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 11595355 - 11595402
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 13018243 - 13018294
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  13018243 tagaattttaaattctttataatttctcaattacctcatccaaacacactct 13018294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 14306415 - 14306364
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  14306415 tagaattctaaattctttaaaatttctcaattacctcatccaaacacactct 14306364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 44256125 - 44256184
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactcta 177  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||||||||| ||||||    
T  44256125 aattgcctagaattctaaattctttaaaatttctcaattacctcatccaaacatactcta 44256184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27033524 - 27033574
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  27033524 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 27033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28740630 - 28740684
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||| ||||    
T  28740630 atgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttagatg 28740684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 769070 - 769123
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  769070 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 769123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1583848 - 1583795
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  1583848 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 1583795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30698315 - 30698368
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||    
T  30698315 atgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggat 30698368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32840227 - 32840178
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  32840227 aatgttttgagggaatttaaatactttgaggtgaatttcattgtttggat 32840178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33189296 - 33189243
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||||||||||||||||    
T  33189296 atgtattgttttaagggaattcaaatactttggggtgaattccattgtttggat 33189243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 17906143 - 17906195
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||||||||||||| |||||   ||||||||||||||||||||||||||||    
T  17906143 aattttaaattctttataatttttcaattacctcatccaaacacactctaagg 17906195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 19231074 - 19231015
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| ||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||    
T  19231074 aattgcctagaattctaa-ttctttaaaatttctcaattacctcatccaaacacactctaa 19231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 784918 - 784868
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  784918 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 784868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 7611916 - 7611874
Alignment:
Q  12 tgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  7611916 tgagggaattcaaatactttgatgtgaattccattgtttggat 7611874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 19072337 - 19072383
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||||    
T  19072337 taaattctttaaaatttctcaattatctcatccaaacacactctaag 19072383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 21504488 - 21504534
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  21504488 aatgttttgagggaattcaaatattttgagatgaattccattgtttg 21504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 28021756 - 28021706
Alignment:
Q  126 agaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  28021756 agaattctaaattctttaaaatttctcaattagctcatccaaacacactct 28021706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41461640 - 41461590
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| || | |||||||||||| ||||||||    
T  41461640 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 41461590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3092316 - 3092369
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||||||| |||||||||||| || ||| |||||||||||||||||    
T  3092316 atgtattgttttgaggaaattcaaatactttggggtaaattccattgtttggat 3092369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7309802 - 7309749
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || ||||||||||||| |||||||    
T  7309802 atgtattgttttaagggaattcaaatactttggggtgaattccattatttggat 7309749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11141339 - 11141392
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || |||||||| ||||||||||||    
T  11141339 atgtattgttttaagggaattcaaatactttggggtgaattacattgtttggat 11141392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 11141811 - 11141852
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  11141811 taaattctttaaaatttctcaattacctcatccaaacacact 11141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11716442 - 11716483
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  11716442 atgtaatgttttgagggaattcaactactttgaggtgaattc 11716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14365734 - 14365775
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  14365734 atgtaatgttttgagggaattcaactactttgaggtgaattc 14365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14954392 - 14954343
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||||||    
T  14954392 atgtaatgttttgagggaattcaactactttaaggtgaattctattgttt 14954343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35047718 - 35047665
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| || ||||||||||| |||||||||    
T  35047718 atgtattgttttaagggaattcaaatactttggggtgaattccaatgtttggat 35047665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 41585244 - 41585192
Alignment:
Q  126 agaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| |||||||||||||||||   |||||||||||||||| |||||||||    
T  41585244 agaattctaaattctttaaaatttatcaattacctcatccaaagacactctaa 41585192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 19193801 - 19193746
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    |||||| || |||||||| || |||||||||| | |||||||||||||||||||||    
T  19193801 aattgcctaaaattttaatttttttaaaattttccaattacctcatccaaacacac 19193746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 40026101 - 40026148
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  40026101 taatgttttgaggaaatttaaatactttgaggtgaattctattgtttg 40026148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 44255674 - 44255721
Alignment:
Q  7 tgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||| ||||||||||||| || ||||||||| |||||||||||    
T  44255674 tgttttgagagaattcaaatactttggggtgaattctattgtttggat 44255721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 11793928 - 11793962
Alignment:
Q  81 aatgtaatgttatgagggaattcaaatgctttgag 115  Q
    ||||||||||||||||||||||||||| |||||||    
T  11793928 aatgtaatgttatgagggaattcaaatactttgag 11793962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 14537320 - 14537274
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||| |||| | |||||||||| ||||||||    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttg 14537274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 45094507 - 45094457
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||| || |||| | | ||||||||||||||||||||    
T  45094507 taatgttttgagggaatttaactactttaaagtgaattccattgtttggat 45094457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 1730095 - 1730140
Alignment:
Q  9 ttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||| ||||||| |||| |||||| ||||||||||||    
T  1730095 ttttgagggaatttaaatactttgagatgaatttcattgtttggat 1730140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7228051 - 7227998
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||| |||||| ||||||  |||||| |||| ||||||||||||    
T  7228051 atgtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggat 7227998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 7611470 - 7611421
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||||||||||||| ||||||||  ||||||  ||||||||||||||    
T  7611470 tagaattttaaattcttcaaaatttctcaattactccatccaaacacact 7611421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11594842 - 11594895
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||||| ||||| |||||||| |||||||||||  |||||||||||    
T  11594842 atgtaatattttgaaggaatacaaatactttgaggtgaatttaattgtttggat 11594895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 11684711 - 11684674
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattc 11684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14537233 - 14537274
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||| ||||||| |||| ||||||||||||    
T  14537233 atgtaatgttttgaggtaattcaactactttgaggtgaattc 14537274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17905688 - 17905733
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccatt 46  Q
    |||||||||||| | |||||||||||| | ||||||||||||||||    
T  17905688 atgtaatgttttaaaggaattcaaatattttgaggtgaattccatt 17905733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 31703974 - 31703921
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    ||||||| |||||| | |||||||| | ||||||||||| ||||||||||||||    
T  31703974 tagaattctaaattatctaaaattttccaattacctcattcaaacacactctaa 31703921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39630259 - 39630311
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| ||||||||||||||||||||| | ||||| |||||| |||||||||||    
T  39630259 atgtattgttttgagggaattcaaata-tttgaggggaattctattgtttggat 39630311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41585725 - 41585676
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| ||| ||||| |  |||||||||||    
T  41585725 aatgttttgagggaattcaaatactttgaagtgaaatttattgtttggat 41585676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 30265822 - 30265854
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttc 150  Q
    |||||||||||||| ||||||||||||||||||    
T  30265822 aattgcttagaattctaaattctttaaaatttc 30265854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13487309 - 13487485
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||    
T  13487309 atgtagtgttatgagggaattcaaatactttgaggtgaatttcattgtttggatgggggaatgtaatgtaatgttgaggaaatgtaatattacgagggaa 13487408  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13487409 ttcaaatactttgagataaattgtctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 13487485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34245019 - 34244843
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| || || ||||||||| |||||| ||||    
T  34245019 atgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttggatggggaaatgtaatgtaatattgagtaaatgtaatattatgaaggaa 34244920  T
Q  101 ttcaaatgctttgagat-aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    || |||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34244919 tttaaatactttgaggtaaattgcctagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 34244843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 34364777 - 34364957
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg-gggaaatgtaatgtaatgttaaggaaatgtaatgttatgaggga 99  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||| |||||||||    
T  34364777 atgtaatgttatgagggaatttaaatactttgaggtgaattccattgtttggatgtggggaatgtaatgtaatgttgaggaaatataatgctatgaggga 34364876  T
Q  100 attcaaatgctttgagataa-ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||||| ||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34364877 attcaaatactttgaggtaaattgcctagaattttaaattctttaaaattttcaaattacctcatccaaacacactctaag 34364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29889473 - 29889296
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaatgttaaggaaatgtaatgttatgagggaa 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||| || | ||||||||||||||||| ||||    
T  29889473 atgtaatgttttgagggaattcaaatactttgatgtgaattccattatttggatgggggaatgtaatgtaatattgaagaaatgtaatgttatgaaggaa 29889374  T
Q  101 ttcaaatgctttga-gataattgcttagaattttaaattcttt-aaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||| |||||| | ||||||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  29889373 ttcaaatactttgaggttaattgcctagaattttaaattctttaaaaaatttcaaattacctcatccaaacacactct 29889296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 8475620 - 8475679
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactcta 177  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||| ||||||||||||    
T  8475620 aattgcctagaattctaaattctttaaaatttctcaattacctcatctaaacacactcta 8475679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 15615967 - 15615916
Alignment:
Q  129 attttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  15615967 attttaaattctttaaaatttatcaattacctcatccaaacacactctaagg 15615916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9763046 - 9763096
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  9763046 atgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 9763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 1195371 - 1195416
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  1195371 aatgttttgagggatttcaaatactttgaggtgaattccattgttt 1195416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 8475199 - 8475248
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  8475199 aatgttttgagggaattcaaatacttttgggtgaattccattgtttggat 8475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9697496 - 9697549
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  9697496 atgtgatgttttgaaggaattcaaatactttgatgtgaattccattgtttggat 9697549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15832500 - 15832553
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||||||| || |||||||| ||||||||||||    
T  15832500 atgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttggat 15832553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28918199 - 28918252
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||    
T  28918199 atgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggat 28918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1195795 - 1195855
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||||| |||||||| ||||||| |||||||||  ||||||||||| ||||||||||||||    
T  1195795 aattgcctagaatttcaaattctctaaaatttctcaattacctcattcaaacacactctaa 1195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 6357883 - 6357823
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaa 178  Q
    |||| |||| |||| ||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  6357883 aattacttaaaattctaaattcttcaaaatttcccaattacctcgtccaaacacactctaa 6357823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 31412940 - 31412988
Alignment:
Q  6 atgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||    
T  31412940 atgttttgagggaattcaaatactttgatatgaattccattgtttggat 31412988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 724862 - 724807
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaagg 180  Q
    ||||||| ||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  724862 tagaattctaaattcttaaaaaattctcaattacctcatccaaacacactctaagg 724807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 1368974 - 1369025
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  1368974 tagaattttaaattctttataatttctcaattacctcgtccaaacacactct 1369025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 10105512 - 10105555
Alignment:
Q  133 taaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  10105512 taaattctttaaaatttctcaattacctcatccaaacacactct 10105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9285681 - 9285731
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  9285681 atgtaatgttttgagggaattcaactactttgagctgaattctattgtttg 9285731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6919742 - 6919783
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  6919742 atgtaatgttttgagggaattcaactactttgaggtgaattc 6919783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 9697889 - 9697946
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactctaaggttcat 185  Q
    |||| ||||||||||||||||||  ||||||  ||||||||||||||||||| |||||    
T  9697889 aattctaaattctttaaaatttctcaattactccatccaaacacactctaagtttcat 9697946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 776205 - 776155
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||| ||||||| |||| | |||||||||| ||||||||    
T  776205 atgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttg 776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1368511 - 1368564
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| |||| |||||||||||||  | |||||||||||| |||||||||||    
T  1368511 atgtaatattttaagggaattcaaatgttttgaggtgaattctattgtttggat 1368564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9763137 - 9763096
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| || ||||||||| ||||    
T  9763137 atgtaatgttttgagggaattcaattattgtgaggtggattc 9763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 31413358 - 31413407
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctcatccaaacacact 174  Q
    ||||||| ||||||||| ||||||||  ||||||| ||||||||||||||    
T  31413358 tagaattctaaattcttcaaaatttctcaattaccccatccaaacacact 31413407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6358290 - 6358242
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtt 49  Q
    ||||||||||||||| ||||| ||||||| || ||||||||| ||||||    
T  6358290 atgtaatgttttgagagaatttaaatactttgtggtgaattctattgtt 6358242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15299550 - 15299510
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaatt 41  Q
    |||||||||||||| ||||||||| |||| |||||||||||    
T  15299550 atgtaatgttttgaaggaattcaactactttgaggtgaatt 15299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26901803 - 26901755
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtt 49  Q
    ||||||| ||||||||||||||||||| | | ||||||||| |||||||    
T  26901803 atgtaatattttgagggaattcaaataattttaggtgaatttcattgtt 26901755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 11279 - 11378
Alignment:
Q  77 aggaaatgtaatgttatgagggaattcaaatgctttgagataa-ttgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactc 175  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| |||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11279 aggaaatgtaatgttatgaaggaattcaaatactttgaggtaaattgcctaaaattttaaattctttacaatttccaaattacctcatccaaacacactc 11378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10920 - 10991
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatggggaaatgtaatgtaat 72  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  10920 atgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttggatgggggaatgtaatgtaat 10991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 10912 - 10952
Alignment:
Q  74 ttaaggaaatgtaatgttatgagggaattcaaatgctttga 114  Q
    |||||| ||||||||||| ||||||||||||||| ||||||    
T  10912 ttaagggaatgtaatgttttgagggaattcaaatactttga 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4109 - 4162
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  4109 atgtaatgttttgagggaattcaaatactttgaggtgaattctattgtttggat 4162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 4510 - 4571
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacactctaag 179  Q
    |||||| ||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||    
T  4510 aattgcctagaattctaaattctttaaaatttcccaattagttcatccaaacacactctaag 4571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2901 - 2953
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  2901 atgtaatgttttgagggaattcaaata-tttgaggtgaattccattgtttggat 2953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 3358 - 3406
Alignment:
Q  128 aattttaaattctttaaaatttccaaattacctcatccaaacacactct 176  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||||||    
T  3358 aattctaaattctttaaaatttctcaattacctcatccaaagacactct 3406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 109069 - 109118
Alignment:
Q  5 aatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  109069 aatgttttgagggaatttaaatactttgatgtgaattccattgtttggat 109118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 11554 - 11499
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcatccaaacacac 173  Q
    |||| ||||||||| ||||||||||||||||| | || ||||||||||||||||||    
T  11554 aattacttagaattctaaattctttaaaattttccaaatacctcatccaaacacac 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 4534 - 4484
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||| |||||||||| | || |||||||||||||||||||||    
T  4534 taatgttttgaggaaattcaaatattttggggtgaattccattgtttggat 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 5178 - 5128
Alignment:
Q  4 taatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||||||||| |||||||||| | || |||||||||||||||||||||    
T  5178 taatgttttgaggaaattcaaatattttggggtgaattccattgtttggat 5128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 130388 - 130442
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggatg 55  Q
    ||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||    
T  130388 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttggatg 130442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7185 - 7238
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||| |||||| |||||||||||||||| ||  ||||||||||||||||||||    
T  7185 atgtattgttttaagggaattcaaatactttggagtgaattccattgtttggat 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 7643 - 7688
Alignment:
Q  118 aattgcttagaattttaaattctttaaaatttccaaattacctcat 163  Q
    |||||| ||||||| ||||||||||||||||||  |||||||||||    
T  7643 aattgcctagaattctaaattctttaaaatttctcaattacctcat 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19232 - 19280
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgttt 50  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  19232 atgtaatgttttgagg-aattcaaatattttgaggtgaattccattgttt 19280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 9617 - 9572
Alignment:
Q  9 ttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  9617 ttttgagagaattcaaatactttgaggtaaattccattgtttggat 9572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 2579 - 2542
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctca 162  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  2579 tagaattttaaattctttaaaatttcacaattacctca 2542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42031 - 42072
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  42031 atgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 82977 - 83025
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtt 49  Q
    |||||||||||||||||||||||| |||| | |||||||||| ||||||    
T  82977 atgtaatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 56397 - 56349
Alignment:
Q  3 gtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  56397 gtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 56349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 56308 - 56345
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  56308 atgtaatgttttgagggaattcaactactttgaggtga 56345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 50335 - 50296
Alignment:
Q  12 tgagggaattcaaatactgtgaggtgaattccattgtttg 51  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  50335 tgagggaattcaaatactttgatgtgaattccattgtttg 50296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 530 - 493
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  530 atgtaatgttttgagggaattcaactactttgaggtga 493  T

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Target: scaffold1158 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2063 - 2100
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  2063 atgtaatgttttgagggaattcaactactttgaggtga 2100  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 15537 - 15500
Alignment:
Q  125 tagaattttaaattctttaaaatttccaaattacctca 162  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  15537 tagaattttaaattctttaaaatttcacaattacctca 15500  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 221235 - 221182
Alignment:
Q  1 atgtaatgttttgagggaattcaaatactgtgaggtgaattccattgtttggat 54  Q
    |||||||||||| |||||||||||||| | || |||||||| |||| |||||||    
T  221235 atgtaatgttttaagggaattcaaatattttggggtgaatttcattatttggat 221182  T

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