View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15559_low_1 (Length: 346)

Name: NF15559_low_1
Description: NF15559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15559_low_1
NF15559_low_1
[»] chr2 (36 HSPs)
chr2 (14-324)||(18255645-18255955)
chr2 (241-330)||(11190087-11190176)
chr2 (241-331)||(580771-580861)
chr2 (243-331)||(30474185-30474273)
chr2 (241-331)||(15392199-15392289)
chr2 (241-331)||(17154666-17154756)
chr2 (241-331)||(18386800-18386890)
chr2 (241-331)||(22538556-22538646)
chr2 (239-324)||(29664627-29664712)
chr2 (239-331)||(32943356-32943448)
chr2 (241-331)||(8234780-8234870)
chr2 (267-324)||(43870977-43871034)
chr2 (231-331)||(42091253-42091352)
chr2 (241-324)||(3037610-3037693)
chr2 (241-324)||(3179348-3179431)
chr2 (252-331)||(9791894-9791973)
chr2 (241-324)||(11133100-11133183)
chr2 (241-331)||(20122463-20122553)
chr2 (241-331)||(32891298-32891388)
chr2 (243-324)||(2114425-2114506)
chr2 (239-331)||(31564112-31564198)
chr2 (231-331)||(1836605-1836705)
chr2 (239-331)||(7086270-7086362)
chr2 (231-331)||(16028086-16028186)
chr2 (241-324)||(9796921-9797004)
chr2 (241-324)||(44721692-44721775)
chr2 (241-283)||(3021077-3021119)
chr2 (241-287)||(11837050-11837096)
chr2 (247-288)||(10207705-10207746)
chr2 (246-331)||(10262756-10262841)
chr2 (242-331)||(22297441-22297530)
chr2 (267-324)||(29035000-29035057)
chr2 (265-322)||(32944088-32944145)
chr2 (242-331)||(36426845-36426934)
chr2 (267-299)||(19208890-19208922)
chr2 (242-330)||(36665448-36665536)
[»] chr5 (33 HSPs)
chr5 (240-331)||(20945878-20945969)
chr5 (241-331)||(27219551-27219641)
chr5 (241-331)||(32158402-32158492)
chr5 (244-331)||(7645093-7645180)
chr5 (241-331)||(19058992-19059082)
chr5 (241-331)||(29096296-29096386)
chr5 (241-331)||(33729795-33729885)
chr5 (241-331)||(42455382-42455472)
chr5 (231-331)||(10508597-10508697)
chr5 (240-331)||(6671773-6671864)
chr5 (240-323)||(8015860-8015943)
chr5 (245-331)||(18478020-18478106)
chr5 (239-329)||(23925562-23925652)
chr5 (241-331)||(33800910-33801000)
chr5 (231-331)||(2029106-2029206)
chr5 (239-331)||(29106024-29106116)
chr5 (241-324)||(843356-843439)
chr5 (241-288)||(6014839-6014886)
chr5 (241-324)||(10943740-10943823)
chr5 (241-331)||(18872538-18872626)
chr5 (242-297)||(22872807-22872862)
chr5 (252-323)||(42801440-42801511)
chr5 (241-331)||(1244715-1244805)
chr5 (231-297)||(12238794-12238860)
chr5 (245-331)||(29841365-29841451)
chr5 (242-324)||(42618402-42618484)
chr5 (267-324)||(1463895-1463952)
chr5 (265-322)||(19608639-19608696)
chr5 (267-324)||(20735189-20735246)
chr5 (241-330)||(40339088-40339176)
chr5 (239-331)||(36888079-36888171)
chr5 (241-317)||(38618669-38618745)
chr5 (231-283)||(43166734-43166786)
[»] chr7 (33 HSPs)
chr7 (241-331)||(22706016-22706106)
chr7 (239-331)||(22965944-22966036)
chr7 (240-331)||(21086121-21086212)
chr7 (241-331)||(34948123-34948213)
chr7 (242-331)||(2261473-2261562)
chr7 (239-324)||(38451887-38451972)
chr7 (241-324)||(21285341-21285424)
chr7 (241-324)||(29658260-29658343)
chr7 (239-297)||(4104533-4104591)
chr7 (241-331)||(27907884-27907974)
chr7 (241-331)||(30644186-30644276)
chr7 (239-324)||(42887178-42887263)
chr7 (239-319)||(39969029-39969109)
chr7 (244-331)||(38778670-38778757)
chr7 (244-331)||(47552230-47552317)
chr7 (241-331)||(17900867-17900957)
chr7 (270-324)||(34960937-34960991)
chr7 (242-331)||(30152758-30152847)
chr7 (245-329)||(2366376-2366460)
chr7 (235-331)||(46716350-46716446)
chr7 (242-285)||(22047583-22047626)
chr7 (239-331)||(22741220-22741314)
chr7 (240-331)||(27957585-27957675)
chr7 (241-331)||(5787478-5787568)
chr7 (252-322)||(14102487-14102557)
chr7 (252-322)||(14412504-14412574)
chr7 (231-277)||(21925546-21925592)
chr7 (269-331)||(36176888-36176950)
chr7 (267-324)||(41139111-41139168)
chr7 (239-287)||(8214171-8214219)
chr7 (252-324)||(31694094-31694166)
chr7 (267-319)||(47880175-47880227)
chr7 (239-331)||(49012415-49012507)
[»] chr6 (26 HSPs)
chr6 (245-334)||(2970203-2970292)
chr6 (241-331)||(9491723-9491813)
chr6 (241-331)||(12089114-12089204)
chr6 (242-331)||(7563565-7563654)
chr6 (239-331)||(10377110-10377202)
chr6 (239-331)||(22389736-22389828)
chr6 (239-318)||(6530190-6530269)
chr6 (241-331)||(18904671-18904761)
chr6 (241-331)||(25020516-25020606)
chr6 (242-331)||(5288334-5288423)
chr6 (245-324)||(3448376-3448455)
chr6 (239-324)||(26528591-26528676)
chr6 (239-324)||(35190787-35190872)
chr6 (239-331)||(12127895-12127987)
chr6 (239-319)||(16801818-16801898)
chr6 (241-331)||(9438319-9438409)
chr6 (241-331)||(16251511-16251601)
chr6 (231-284)||(9424507-9424560)
chr6 (265-322)||(24256942-24256999)
chr6 (239-324)||(34396107-34396192)
chr6 (239-331)||(753298-753390)
chr6 (247-331)||(12101903-12101987)
chr6 (243-331)||(15288945-15289033)
chr6 (231-331)||(20716370-20716470)
chr6 (239-331)||(23771050-23771142)
chr6 (239-287)||(30566119-30566167)
[»] chr4 (41 HSPs)
chr4 (239-324)||(35451107-35451192)
chr4 (239-331)||(3465600-3465692)
chr4 (239-331)||(10098142-10098234)
chr4 (240-324)||(55656095-55656179)
chr4 (241-331)||(17859795-17859885)
chr4 (245-331)||(47017938-47018024)
chr4 (231-324)||(31601830-31601923)
chr4 (242-297)||(6330925-6330980)
chr4 (241-331)||(548875-548965)
chr4 (241-323)||(20753113-20753195)
chr4 (243-329)||(34773673-34773759)
chr4 (245-331)||(44074870-44074956)
chr4 (241-329)||(39992855-39992942)
chr4 (239-287)||(48512260-48512308)
chr4 (239-331)||(52560781-52560873)
chr4 (241-329)||(53697968-53698056)
chr4 (244-331)||(24234065-24234152)
chr4 (241-331)||(35332976-35333066)
chr4 (253-331)||(35747482-35747560)
chr4 (242-324)||(36008299-36008381)
chr4 (239-331)||(9285645-9285737)
chr4 (252-324)||(36576288-36576360)
chr4 (241-331)||(5430352-5430443)
chr4 (252-331)||(6053997-6054076)
chr4 (245-331)||(12868019-12868104)
chr4 (293-331)||(35031400-35031438)
chr4 (246-324)||(37032172-37032250)
chr4 (245-331)||(43115285-43115371)
chr4 (241-331)||(50657897-50657987)
chr4 (232-285)||(12820384-12820437)
chr4 (267-324)||(14149817-14149874)
chr4 (267-324)||(28520745-28520802)
chr4 (242-331)||(32885705-32885794)
chr4 (267-324)||(48968224-48968281)
chr4 (239-331)||(51077884-51077977)
chr4 (239-331)||(3442860-3442952)
chr4 (267-323)||(9692987-9693043)
chr4 (239-331)||(9924873-9924965)
chr4 (241-321)||(21476069-21476149)
chr4 (237-322)||(42758146-42758232)
chr4 (241-285)||(49280657-49280701)
[»] scaffold1990 (1 HSPs)
scaffold1990 (231-331)||(911-1011)
[»] scaffold0092 (1 HSPs)
scaffold0092 (231-331)||(47295-47395)
[»] chr1 (36 HSPs)
chr1 (239-331)||(21884592-21884684)
chr1 (231-324)||(32711122-32711214)
chr1 (231-331)||(42831964-42832064)
chr1 (244-331)||(4354096-4354183)
chr1 (241-331)||(15368822-15368912)
chr1 (245-323)||(33059485-33059562)
chr1 (241-323)||(39433383-39433465)
chr1 (242-331)||(15774301-15774390)
chr1 (239-324)||(24636748-24636833)
chr1 (239-324)||(30632370-30632455)
chr1 (242-324)||(11405480-11405562)
chr1 (241-331)||(19793543-19793633)
chr1 (252-318)||(35840108-35840174)
chr1 (241-331)||(37733772-37733862)
chr1 (246-331)||(23463979-23464064)
chr1 (267-324)||(39238740-39238797)
chr1 (231-324)||(39994826-39994919)
chr1 (252-324)||(538328-538400)
chr1 (239-331)||(43555860-43555952)
chr1 (234-329)||(49606678-49606774)
chr1 (241-331)||(38019935-38020026)
chr1 (260-331)||(38851652-38851723)
chr1 (241-324)||(39434642-39434725)
chr1 (241-331)||(20357477-20357566)
chr1 (241-331)||(20562389-20562478)
chr1 (241-331)||(37490907-37490997)
chr1 (241-331)||(46116162-46116252)
chr1 (241-331)||(49251383-49251473)
chr1 (241-330)||(3532962-3533050)
chr1 (267-324)||(13870095-13870152)
chr1 (267-324)||(17350085-17350142)
chr1 (270-323)||(26619902-26619954)
chr1 (267-331)||(2208652-2208716)
chr1 (252-296)||(6014517-6014561)
chr1 (239-331)||(23345043-23345133)
chr1 (267-319)||(30519412-30519464)
[»] chr8 (39 HSPs)
chr8 (239-329)||(42762018-42762106)
chr8 (241-323)||(10970291-10970373)
chr8 (242-324)||(14012636-14012718)
chr8 (242-331)||(15042354-15042443)
chr8 (242-331)||(39484359-39484448)
chr8 (239-323)||(4798527-4798611)
chr8 (231-331)||(43468683-43468783)
chr8 (244-331)||(26703881-26703968)
chr8 (239-318)||(36359704-36359783)
chr8 (231-324)||(23964679-23964771)
chr8 (242-325)||(13702341-13702424)
chr8 (234-324)||(6064401-6064491)
chr8 (259-329)||(8034549-8034619)
chr8 (241-323)||(17987437-17987519)
chr8 (241-331)||(24074523-24074613)
chr8 (246-331)||(9524974-9525059)
chr8 (246-331)||(24608476-24608561)
chr8 (239-331)||(10184787-10184879)
chr8 (242-330)||(10199731-10199819)
chr8 (245-329)||(30942591-30942675)
chr8 (239-323)||(34073225-34073309)
chr8 (242-284)||(3226187-3226229)
chr8 (245-331)||(37219522-37219608)
chr8 (241-331)||(40249866-40249958)
chr8 (231-324)||(1032939-1033031)
chr8 (267-324)||(2696557-2696614)
chr8 (267-324)||(2800043-2800100)
chr8 (242-331)||(5184876-5184965)
chr8 (267-324)||(7314757-7314814)
chr8 (239-331)||(7540473-7540566)
chr8 (246-287)||(11823023-11823064)
chr8 (239-324)||(14683901-14683985)
chr8 (241-318)||(30461566-30461643)
chr8 (252-329)||(43874976-43875053)
chr8 (239-287)||(23239185-23239233)
chr8 (239-319)||(31373349-31373429)
chr8 (242-286)||(33570418-33570462)
chr8 (237-324)||(42761848-42761936)
chr8 (242-330)||(44070357-44070445)
[»] chr3 (34 HSPs)
chr3 (239-330)||(35483287-35483378)
chr3 (241-331)||(33206774-33206864)
chr3 (231-323)||(31698558-31698650)
chr3 (241-331)||(42271001-42271091)
chr3 (239-324)||(13874820-13874905)
chr3 (242-331)||(14417885-14417974)
chr3 (239-324)||(35140743-35140828)
chr3 (242-331)||(49146101-49146190)
chr3 (231-331)||(20244151-20244251)
chr3 (252-331)||(45713497-45713576)
chr3 (241-324)||(47191397-47191480)
chr3 (241-331)||(43566784-43566874)
chr3 (241-331)||(49639045-49639135)
chr3 (242-323)||(32508783-32508864)
chr3 (242-323)||(37059472-37059553)
chr3 (241-314)||(46328912-46328985)
chr3 (242-287)||(48173347-48173392)
chr3 (251-331)||(21420187-21420267)
chr3 (241-329)||(34344766-34344853)
chr3 (252-331)||(16277950-16278029)
chr3 (244-331)||(23820646-23820733)
chr3 (241-324)||(43774209-43774292)
chr3 (239-324)||(9625007-9625092)
chr3 (258-324)||(40692239-40692305)
chr3 (239-300)||(8175808-8175869)
chr3 (231-316)||(14271905-14271990)
chr3 (267-324)||(27183695-27183752)
chr3 (266-323)||(32665306-32665363)
chr3 (239-324)||(36331712-36331797)
chr3 (239-324)||(49019207-49019292)
chr3 (239-331)||(13539950-13540042)
chr3 (246-314)||(24537861-24537929)
chr3 (231-287)||(50144584-50144640)
chr3 (239-331)||(53467966-53468057)
[»] scaffold0533 (1 HSPs)
scaffold0533 (231-330)||(9344-9443)
[»] scaffold0002 (1 HSPs)
scaffold0002 (242-324)||(451364-451446)
[»] scaffold0009 (1 HSPs)
scaffold0009 (267-324)||(108375-108432)
[»] scaffold0039 (1 HSPs)
scaffold0039 (239-323)||(101856-101940)
[»] scaffold1086 (1 HSPs)
scaffold1086 (239-287)||(2549-2597)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 324
Target Start/End: Complemental strand, 18255955 - 18255645
Alignment:
Q  14 cgtgcttcatataacatcatacaataaagtatctatgtttcaatggttnnnnnnnnnnnnnnnnnnn-taatgaggtgagctgcaaactatctatattat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||    
T  18255955 cgtgcttcatataacatcatacaataaagtatctatgtttcaatggttaaaataaaaataaaaataaataatgaggtgagctgcaaactatctatattat 18255856  T
Q  113 tgctccaacatagatacttgacgttgaaaattattaatatgatccttaatggatccaaatcctgagttaggaggtacagatttttcaacttcattaataa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  18255855 tgctccaacatagatacttgacgttgaaaattattaatatgatccttaatggatccaaatcctgagttaggaggtatagatttttcaacttcattaat-a 18255757  T
Q  213 attatatatannnnnnnngtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtat 312  Q
    ||||||||||        || |||| |||||||||||| |||||||||||| | ||||||||||| ||||||||   || ||| |||||| ||||| |||    
T  18255756 attatatatatttgttttgttagatagtctagtggctagaattcatcttataatgtgaataagtggggtgtccgaggttcgaaactcggcccctgcatat 18255657  T
Q  313 aataatgcattg 324  Q
    || |||||||||    
T  18255656 aaaaatgcattg 18255645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 11190087 - 11190176
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||||||| |||||||||||| ||||||||||||  |||||| |||||||||||| |||||||||| |||||||||||||||| ||||    
T  11190087 ctagtggctagaattcatcttataaggtgaataagtagggtgtctggaatttgaaccccggctcctgcatataataatgcattggtctac 11190176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 580771 - 580861
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  580771 ctagtggctagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 580861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 30474185 - 30474273
Alignment:
Q  243 agtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||| |||||| ||||| ||||||||||||| |||||| ||  || |||||||||| ||||| ||||||||||||||| ||||||    
T  30474185 agtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctacc 30474273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 15392199 - 15392289
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||| || ||||| | ||||||||||||||||||||   || |||||||| ||||| | ||||||||||||||| ||||||    
T  15392199 ctagtggctaaaatacaccttataaagtgaataagtgaggtgtccgaggttcgaacctcgtctcctacatataataatgcattgtcctacc 15392289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 17154756 - 17154666
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| || ||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  17154756 ctagtggctagaactcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 17154666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 18386800 - 18386890
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| ||||| |||||||||||| ||||||||||||| |||||||||| || ||||| | || ||| | ||||||||||||||| ||||||    
T  18386800 ctagcggctagaattcatcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcattgtcctacc 18386890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 22538646 - 22538556
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||||||||| ||| ||| ||||| |  | ||||| ||||||||||||||| ||||||    
T  22538646 ctagtggctagaattcaccttataaggtgaataagtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattgtcctacc 22538556  T

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Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 29664712 - 29664627
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||| ||||| || |||||||||| ||||||||| ||||||||| || | ||||| ||||| |||||||||    
T  29664712 gtctagtggctagaattcaccttataagatgaataagtggggtgtccgggatttgaaccccgacccctgcatataacaatgcattg 29664627  T

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Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 32943448 - 32943356
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||||||||| |  |||| ||||||||||||| |||||||| |||| ||||| | ||  |||| ||||||||||||||| ||||||    
T  32943448 gtctagtggctaaaatttactttataaggtgaataagtggggtgtccgaaattcgaaccccagcctctgcatataataatgcattgtcctacc 32943356  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 8234780 - 8234870
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||| | |||||||||| |||| ||||||    
T  8234780 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgtattgtcctacc 8234870  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 43871034 - 43870977
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||| |||||||||||||||    
T  43871034 gtgaataagtggggtgtccgggattcgaaccccggctcctgcatataataatgcattg 43870977  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 42091253 - 42091352
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| ||||||||||||||||||| ||| | ||||||||||||| | ||| |||  || ||||  |||||||||  ||||||||||||||| |||||    
T  42091253 gtcagatagtctagtggctaaaattcaccttgtaaggtgaataagtgggttgttcgg-gttcgaactccggctcctgaatataataatgcattgtcctac 42091351  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 3037610 - 3037693
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||| ||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||| |||||||||    
T  3037610 ctagtgcctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattg 3037693  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 3179431 - 3179348
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||| |   || |||||||| | ||||| |||||||||||||||    
T  3179431 ctagtggctagaattcaccttataaggtgaataagtggggtgtctgaggttcgaacctcgacccctgcatataataatgcattg 3179348  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 9791894 - 9791973
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| || |||||||||| ||||||| ||||| ||||| || | ||| | ||||||||||||||| ||||||    
T  9791894 aattcatcttataagatgaataagtggggtgtccagaattcgaaccccgacacctacatataataatgcattgtcctacc 9791973  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 11133183 - 11133100
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| || | ||||| ||||| |||||||||    
T  11133183 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattg 11133100  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 20122463 - 20122553
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| || ||||||||||  ||||||||  || ||||| |||| ||| | ||||||||||||||| ||||||    
T  20122463 ctagtggctagaattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcctacc 20122553  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 32891388 - 32891298
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||||||||| || |||||||||| |||||||||  || |||   || | ||||| ||||||||||||||| ||||||    
T  32891388 ctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcattgtcctacc 32891298  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 324
Target Start/End: Original strand, 2114425 - 2114506
Alignment:
Q  243 agtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||| |||||| ||||| |||||||||| ||||||||||||  || ||||| || | ||| | |||||||||||||||    
T  2114425 agtggctagaattcaccttataaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatataataatgcattg 2114506  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 31564198 - 31564112
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| |||||  || |||||      ||||| ||||||||||||||| ||||||    
T  31564198 gtctagtggctagaattcatcttataaggtgaataagtggggtttccggggttcgaacc------cctgcatataataatgcattgtcctacc 31564112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 1836705 - 1836605
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | |||||||||| |||||| |||||  |||||||||||  |||||||||  || ||||| ||  |||| | ||||||||||||||| |||||    
T  1836705 gtcagatagcctagtggctagaattcaccttatatggtgaataagtagggtgtccggggttcgaaccccgattccttcatataataatgcattgtcctac 1836606  T
Q  331 c 331  Q
    |    
T  1836605 c 1836605  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 7086362 - 7086270
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| || |||||| ||||| |||||||||| || ||||| |||  || ||| | |||| ||||| ||||||||||||||| ||||||    
T  7086362 gtctagtggttagaattcaccttataaggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataatgcattgccctacc 7086270  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 16028086 - 16028186
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| |||| ||||||| |||||| ||||| | ||||||||||| | |||| ||| || ||||| || |  |||| ||||||||||||||| |||||    
T  16028086 gtcagatagtctggtggctagaattcaccttataaagtgaataagtgggatgtctggagttcgaaccccgaccactgcatataataatgcattgtcctac 16028185  T
Q  331 c 331  Q
    |    
T  16028186 c 16028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 9797004 - 9796921
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||| ||| |||||| ||||| || |||||||||| |||||||||  || ||||| || | ||||| |||||||||||||||    
T  9797004 ctagtgtctagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattg 9796921  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 44721692 - 44721775
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| |||||||||| || ||||||||   || ||||| || | ||||| |||||||||||||||    
T  44721692 ctagtggctagaattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatgcattg 44721775  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 3021077 - 3021119
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgt 283  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  3021077 ctagtggctagaattcatcttataaggtgaataagtgcggtgt 3021119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 11837096 - 11837050
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    |||||||||| ||||||  |||| |||||||||||||||||||||||    
T  11837096 ctagtggctagaattcactttataaggtgaataagtgaggtgtccgg 11837050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 10207746 - 10207705
Alignment:
Q  247 gctaaaattcatcttatgaggtgaataagtgaggtgtccgga 288  Q
    |||| |||||||||||| |||||||||||||| |||||||||    
T  10207746 gctagaattcatcttataaggtgaataagtgaagtgtccgga 10207705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 10262841 - 10262756
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| ||||||  |||| ||||||||||||| |||||| ||  || ||||| || | ||||| ||||||||||||||| ||||||    
T  10262841 ggctataattcactttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctacc 10262756  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 22297441 - 22297530
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||| |  |||| |||||||||| || |||||||||  || ||||| | || ||||| ||||||||||||||| ||||||    
T  22297441 tagtggctagaattaacattataaggtgaataaatggggtgtccggggttcgaacccctgcccctgcatataataatgcattgtcctacc 22297530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 29035057 - 29035000
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  29035057 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 29035000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 32944145 - 32944088
Alignment:
Q  265 aggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    ||||||||||||||||||| |||| |||||||  ||  |||||| |||||||||||||    
T  32944145 aggtgaataagtgaggtgttcggagtttgaactccgattcctgcatataataatgcat 32944088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 36426845 - 36426934
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||||| ||||| || |||||||||| ||||| |||| || ||||| |  | ||| | ||||||||||||||| ||||||    
T  36426845 tagtggctagaattcaccttataagatgaataagtggggtgttcggagttcgaaccccaacccctacatataataatgcattgtcctacc 36426934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 19208890 - 19208922
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctc 299  Q
    |||||||||||||||||||||| ||||||||||    
T  19208890 gtgaataagtgaggtgtccggagtttgaacctc 19208922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 36665536 - 36665448
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||| || |||||| ||||| |  |||||||||| ||||||||   || ||||| |||| ||||| ||||||||||||||| |||||    
T  36665536 tagtggatagaattcaccttataaaatgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattgtcctac 36665448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 20945878 - 20945969
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||| |||||| ||||| ||||||||||||| |||||||||| || ||||| |||| ||||| ||||||||||||||| ||||||    
T  20945878 tctagtggctagaattcaccttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcattgtcctacc 20945969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 27219551 - 27219641
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||| |||  |||||||| |||| | ||| ||||||||||||||| ||||||    
T  27219551 ctagtggctagaattcaccttattaggtgaataagtggggtgtacggggtttgaaccccggcccatgcatataataatgcattgtcctacc 27219641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 32158402 - 32158492
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||| |||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  32158402 ctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctacc 32158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 7645093 - 7645180
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||| ||||| |||||||||||||||||||||  |||||||||  |  |  |||| ||||||||||||||| ||||||    
T  7645093 gtggctaaaattcaccttataaggtgaataagtgaggtgtccaaaatttgaactccaacctctgcatataataatgcattgtcctacc 7645180  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 19058992 - 19059082
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||| |  || ||||| |||| ||||| ||| ||||||||||| ||||||    
T  19058992 ctagtggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggcccctgcatatgataatgcattgtcctacc 19059082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 29096296 - 29096386
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||  |||| | ||| ||||||||||||||| ||||||    
T  29096296 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccttgcatataataatgcattgtcctacc 29096386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 33729885 - 33729795
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| ||||||||||||| |||||| |  ||| ||||| |||| ||||| ||||||||||||||| ||||||    
T  33729885 ctagtggttagaattcaccttataaggtgaataagtggggtgtctgagattcgaaccccggcccctgcatataataatgcattgtcctacc 33729795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 42455382 - 42455472
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| |||||||||||||  ||||||||  || ||||  |||| ||||| ||||||||||||||| ||||||    
T  42455382 ctagtggctagaattcaccttataaggtgaataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctacc 42455472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 10508697 - 10508597
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | ||| ||||||||||||| ||||| ||||||||||||| ||||||| |  || |||||  ||| ||||| ||||||||| ||||| |||||    
T  10508697 gtcagatagcctattggctaaaattcaccttataaggtgaataagtggggtgtccaggtttcgaaccgtggcccctgcatataataatacattgtcctac 10508598  T
Q  331 c 331  Q
    |    
T  10508597 c 10508597  T

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Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 6671773 - 6671864
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||| |||||| ||||| || |||||||||||| ||||||||||| |||||  |  | |||  ||||||||||||||| ||||||    
T  6671773 tctagtggctagaattcaccttataagatgaataagtgagatgtccggaattcgaaccctgatttctgtatataataatgcattgtcctacc 6671864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 8015943 - 8015860
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||| || |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| | ||||||||||||    
T  8015943 tctagtgggtagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataatgcatt 8015860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 18478106 - 18478020
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| |||||| ||||| ||||||||||||| ||||||| |  || ||||| |||| || || ||||||||||||||| ||||||    
T  18478106 tggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggccccagcatataataatgcattgtcctacc 18478020  T

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Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 23925652 - 23925562
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||||||||| |||||| ||||| || |||||||||| ||| ||||| ||| |||||  | | ||||| ||||||||||||||| ||||    
T  23925652 gtctagtggctagaattcaccttataagatgaataagtggggtatccgggattcgaacccagacccctgcatataataatgcattgtccta 23925562  T

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Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 33801000 - 33800910
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||| || ||| ||||| ||||||||||||| |||||| ||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  33801000 ctagtagctagaactcaccttataaggtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctacc 33800910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 2029106 - 2029206
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||| ||||| |||  || ||| | || | ||||| ||||||||| ||||| |||||    
T  2029106 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataataatacattgtcctac 2029205  T
Q  331 c 331  Q
    |    
T  2029206 c 2029206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 29106024 - 29106116
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| ||||||| |||| | ||||| ||||||||||||| ||||||  |  || |||| ||||| ||||| ||||||||||||||| ||||||    
T  29106024 gtctggtggctagaattaaccttataaggtgaataagtggggtgtctagggttcgaacttcggcccctgcatataataatgcattgtcctacc 29106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 843356 - 843439
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| ||||||  |||| ||||||||||||| |||||||||  || ||||| || | ||| | |||||||||||||||    
T  843356 ctagtggctagaattcaatttataaggtgaataagtggggtgtccggggttcgaaccccgtcccctacatataataatgcattg 843439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 6014886 - 6014839
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgga 288  Q
    |||||||||| |||||| ||||| || |||||||||||||||||||||    
T  6014886 ctagtggctagaattcaccttataagatgaataagtgaggtgtccgga 6014839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 10943823 - 10943740
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| ||||||  || | | ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  10943823 ctagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 10943740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 18872626 - 18872538
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||  ||||||||||||| ||||| |||  || ||||| || | ||||| ||||||||||||||| ||||||    
T  18872626 ctagtggctagaattcacctta--aggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctacc 18872538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 22872807 - 22872862
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacc 297  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||  || ||||||||    
T  22872807 tagtggctagaattcatcttataaggtgaataagtgagatgtctagagtttgaacc 22872862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 42801440 - 42801511
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||| ||||| || ||||||||||||||||||||  || ||||| || | ||||| ||||||||||||||    
T  42801440 aattcaacttataagatgaataagtgaggtgtccggggttcgaaccccgacccctgcatataataatgcatt 42801511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 1244715 - 1244805
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||| ||  || |||||  | | ||||| ||||||||||| ||| ||||||    
T  1244715 ctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataataatgctttgtcctacc 1244805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 12238794 - 12238860
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacc 297  Q
    ||||||| || |||||||||||||||| ||||| || | ||||| ||||||||| |||||| |||||    
T  12238794 gtcagatagtttagtggctaaaattcaccttataagataaataaatgaggtgtctggaattcgaacc 12238860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 29841451 - 29841365
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| |||| | ||||| ||| ||||||||| |||||||||  || ||| |||||| | ||| ||||||||||||||| ||||||    
T  29841451 tggctagaatttaccttataaggggaataagtggggtgtccggggttcgaatctcggcccttgcatataataatgcattgtcctacc 29841365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 42618402 - 42618484
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||  |||||||||||| | ||||||||||| ||| ||||| ||| ||||| || | ||||  |||||||||||||||    
T  42618402 tagtggctggaattcatcttataaagtgaataagtggggtatccgggattcgaaccccgacccctgtatataataatgcattg 42618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 1463952 - 1463895
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  1463952 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 1463895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 19608696 - 19608639
Alignment:
Q  265 aggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    |||||||||||||| ||||||||| || ||||| || | ||||| |||||||||||||    
T  19608696 aggtgaataagtgaagtgtccggagttcgaaccccgacccctgcatataataatgcat 19608639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 20735189 - 20735246
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| ||||||||| ||| ||||| |||| ||| | |||||||||||||||    
T  20735189 gtgaataagtggggtgtccgggattcgaaccccggcccctacatataataatgcattg 20735246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 40339088 - 40339176
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||||||| |||||| ||||| |||||||||| |  ||||||| |  || ||||| |||| ||||| ||||||||||||||| |||||    
T  40339088 ctagtggctagaattcaccttataaggtgaataaattgggtgtccagg-ttcgaaccccggcccctgcatataataatgcattgtcctac 40339176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 36888079 - 36888171
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| ||||||  |||||| ||||| || |||||||||| ||| ||| | |||  |||| |||| ||||| ||||||||||||||| ||||||    
T  36888079 gtctggtggcttgaattcaccttataagatgaataagtggggtctccaggattccaaccccggcccctgcatataataatgcattgtcctacc 36888171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 38618669 - 38618745
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataa 317  Q
    ||||| |||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| | ||| ||||||||    
T  38618669 ctagttgctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccttgcatataataa 38618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 43166786 - 43166734
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgt 283  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||| |||||    
T  43166786 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgt 43166734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 22706016 - 22706106
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||| |||||||||| || ||||| ||||||||| ||||| ||||||    
T  22706016 ctagtagctagaattcatcttataaggtgaataagtggggtgtccggagtttgaacctcagcccctgcatataataatacattgtcctacc 22706106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 22965944 - 22966036
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| || |||||| ||||| ||||||||||||| |||||| ||  || |||||||||| ||||| ||||||||||||||| ||||||    
T  22965944 gtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctacc 22966036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 21086212 - 21086121
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||||| || |||| |||   ||||| ||||||||||||||| ||||||    
T  21086212 tctaatggctaaaattcatcttataaggtgaataagttgggtgtccggagttcgaacttcgatccctgcatataataatgcattgtcctacc 21086121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 34948213 - 34948123
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||||||||  |||| ||| ||||||||||| ||||||    
T  34948213 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaacctcggccactgcatatgataatgcattgtcctacc 34948123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 2261473 - 2261562
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| ||| |||||| ||||| ||||||||||||  ||||||||| ||| ||||| |||| ||||| ||||||||||||||| ||||||    
T  2261473 tagtgtctagaattcaccttataaggtgaataagttgggtgtccgggattcgaaccccggcccctgcatataataatgcattgtcctacc 2261562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 38451972 - 38451887
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||| ||||| | ||||||||||| ||||||||| ||| ||||| |||| ||||| ||||| |||||||||    
T  38451972 gtctagtggctagaattcaccttataatgtgaataagtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattg 38451887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 21285341 - 21285424
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||| |||||||||    
T  21285341 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattg 21285424  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 29658260 - 29658343
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||| |||||||||    
T  29658260 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattg 29658343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 4104591 - 4104533
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacc 297  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||| ||| |||||    
T  4104591 gtctagtggctataattcattttataaggtgaataagtgaggtgtccgggattcgaacc 4104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 27907884 - 27907974
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||||||||| ||||| || |||||||||| ||||||||  |||   ||| |||| ||||| ||||||||||||||| ||||||    
T  27907884 ctagtggctaaaattcaccttataagatgaataagtggggtgtccgagattcttaccccggcccctgcatataataatgcattgtcctacc 27907974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 30644276 - 30644186
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||| ||  || ||||  |||| ||||| ||||||||||||||| ||||||    
T  30644276 ctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaacaccggcccctgcatataataatgcattgtcctacc 30644186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 42887263 - 42887178
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||| ||||| |||| |||||||| |||||||||  || ||||||| || ||||| |||||||||| ||||    
T  42887263 gtctagtggctagaattcaccttataaggtaaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgaattg 42887178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 39969029 - 39969109
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatg 319  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||   ||||||  || || ||||| ||||||||||    
T  39969029 gtctagtggctagaattcatcttataagatgaataagtgaggtgtccgaggtttgaatttcagcccctgcatataataatg 39969109  T

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Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 38778670 - 38778757
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| | |||| ||||| |||| |||||||| | |||||||  || |||||||||| ||||| ||||||||||||||| ||||||    
T  38778670 gtggctagagttcaccttataaggtaaataagtgggatgtccggggttagaacctcggcccctgcatataataatgcattgtcctacc 38778757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 47552317 - 47552230
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||||| ||||| ||||||||||||  |||||||||  || ||||| |||| | ||| ||||||||||||||| ||||||    
T  47552317 gtggctagaattcaccttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgcatataataatgcattgtcctacc 47552230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 17900867 - 17900957
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||| ||||||||| || ||||||  || || || |||| ||||| ||||||||||||||| ||||||    
T  17900867 ctagtggctagaattcaccttataaggagaataagtggggagtccggggttcgagccccggcccctgcatataataatgcattgtcctacc 17900957  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 34960937 - 34960991
Alignment:
Q  270 aataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||| ||||||||| ||| ||||| |||||||||| |||||||||||||||    
T  34960937 aataagtgtggtgtccgggattcgaaccccggctcctgcatataataatgcattg 34960991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 30152847 - 30152758
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| |||  || ||||| || | |||   ||||||||||||||| ||||||    
T  30152847 tagtggctagaattcatcttataaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctacc 30152758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 2366460 - 2366376
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||| |||||| ||||| ||||||||||||| ||||||  || || ||||| || | ||||| ||||||||||||||| ||||    
T  2366460 tggctagaattcaccttataaggtgaataagtggggtgtctagagttcgaaccccgacccctgcatataataatgcattgtccta 2366376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 46716446 - 46716350
Alignment:
Q  235 gatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||||| |||||| ||||| |||| |||||||| ||||| | |  || ||||| || |  |||| ||||||||||||||| ||||||    
T  46716446 gatggtctagtggctataattcaccttataaggtaaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctacc 46716350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 22047626 - 22047583
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtcc 285  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||    
T  22047626 tagtggctagaattcatcttataaggtgaataagtggggtgtcc 22047583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 22741314 - 22741220
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctc--ggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| || |||||||||| ||||||||  ||| ||||| |  | || |||| ||||||||||||||| ||||||    
T  22741314 gtctagtggctagaattcaccttataagatgaataagtggggtgtccgagattcgaaccccctgactactgcatataataatgcattgtcctacc 22741220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 27957585 - 27957675
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| |||||| |||||| ||||| ||||||||||| | |||||||||| || ||||| |||| | ||| ||||||||| ||||| ||||||    
T  27957585 tctattggctagaattcaccttataaggtgaataag-ggggtgtccggatttcgaaccccggcccttgcatataataatacattgtcctacc 27957675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 5787568 - 5787478
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| ||| |||||| ||||| ||||||||||||| |||||  ||  ||  |||| |||| ||||| ||||||||||||||| ||||||    
T  5787568 ctagtgactagaattcaccttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatataataatgcattgtcctacc 5787478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 14102557 - 14102487
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    |||||| ||||| ||||||||||||| |||||||||  ||  |||| |||| ||||| |||||||||||||    
T  14102557 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcat 14102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 14412574 - 14412504
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    |||||| ||||| ||||||||||||| |||||||||  ||  |||| |||| ||||| |||||||||||||    
T  14412574 aattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcat 14412504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 21925592 - 21925546
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtg 277  Q
    ||||||| | |||||||||| |||||||||||| |||||||||||||    
T  21925592 gtcagatagcctagtggctagaattcatcttataaggtgaataagtg 21925546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 36176950 - 36176888
Alignment:
Q  269 gaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||||||||  |||||||||  || ||| | ||||||||||||||| ||||||    
T  36176950 gaataagtgaggtgtccggggtttgaaccttagcccctacatataataatgcattgtcctacc 36176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 41139168 - 41139111
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||||| ||| ||||| || | ||||| |||||||||||||||    
T  41139168 gtgaataagtgaagtgtccgggattcgaaccccgacccctgcatataataatgcattg 41139111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 8214219 - 8214171
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||||||| || |||||| ||||| ||||||||||||| |||||||||    
T  8214219 gtctagtggttagaattcaccttataaggtgaataagtggggtgtccgg 8214171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 31694166 - 31694094
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||| ||||| | || |||||||| |||||||||| || ||| |||| | ||||| |||||||||||||||    
T  31694166 aattcaccttataaagtaaataagtggggtgtccggagttcgaatctcgtcccctgcatataataatgcattg 31694094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 47880227 - 47880175
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatg 319  Q
    ||||||||||| ||||||||| ||| ||||| |||| ||||| ||||||||||    
T  47880227 gtgaataagtggggtgtccgggattcgaaccccggcccctgcatataataatg 47880175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 49012507 - 49012415
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||  || ||||||||||   ||||||||||||  |||||| ||||||||||||  | | ||| | ||||||||||||||| ||||||    
T  49012507 gtctagtgattataattcatctttaaaggtgaataagtagggtgtctggaatttgaaccctgaccccttcatataataatgcattgtcctacc 49012415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 334
Target Start/End: Complemental strand, 2970292 - 2970203
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctaccctt 334  Q
    |||||| |||||||||||| ||||||||||||| |||||||||  ||||||||||||| ||| | |||||||||| |||  |||||||||    
T  2970292 tggctagaattcatcttataaggtgaataagtggggtgtccggggtttgaacctcggcccctacatataataatgtattctcctaccctt 2970203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 9491723 - 9491813
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||||||||| ||||||||||||| |||||||||  || ||||| |||| ||| | ||||||||||||||| ||||||    
T  9491723 ctagtggttagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattgtcctacc 9491813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 12089204 - 12089114
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||  |||| ||||| ||||||||||||||| ||||||    
T  12089204 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctacc 12089114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 7563565 - 7563654
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||  ||||||||  | | ||||| | ||||||||||||| ||||||    
T  7563565 tagtggctaaaattcaccttataaggtgaataagtggggtgtccggggtttgaaccctgacccctgcatgtaataatgcattgtcctacc 7563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 10377110 - 10377202
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||||||||| | ||||||||||| ||||| |||  || ||||| ||||  |||| ||||||||||||||| ||||||    
T  10377110 gtctagtggctagaattcatcttataacgtgaataagtggggtgttcggggttcgaaccccggcctctgcatataataatgcattgtcctacc 10377202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 22389736 - 22389828
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| ||||| |||||| ||||| ||||||||||||| ||||||||| ||| |||||  | | ||||| ||||||||||||||| ||||||    
T  22389736 gtctagcggctagaattcaccttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattgtcctacc 22389828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 6530190 - 6530269
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataat 318  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||||||   |||||||| |||| ||||| |||||||||    
T  6530190 gtctagtggctagaattcaccttataaggtgaataagtggggtgtccgaggtttgaaccccggcccctgcatataataat 6530269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 18904671 - 18904761
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||| || || ||||| |||| | | | ||||||||||||||| ||||||    
T  18904671 ctagtggctagaattcaccttataaggtgaataagtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcctacc 18904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 25020516 - 25020606
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || |||||  ||| ||||| ||||||||||||| | ||||||    
T  25020516 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaacccaggcccctgcatataataatgcatcgtcctacc 25020606  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 5288334 - 5288423
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||||||| || | ||| || | ||||| ||||||||||||||| ||||||    
T  5288334 tagtagctagaattcaccttataaggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcattgtcctacc 5288423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 3448455 - 3448376
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||| |||||| ||||| || |||||||||| |||||||||  || ||||| |||| ||||||||||| |||||||||    
T  3448455 tggctagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcgtataacaatgcattg 3448376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 26528676 - 26528591
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||  ||||||| | ||||| ||||||||||||| ||||||||   |||||||| || | ||||| |||||||||||||||    
T  26528676 gtctagtgtttaaaatttaccttataaggtgaataagtggggtgtccgaggtttgaaccccgacccctgcatataataatgcattg 26528591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 35190872 - 35190787
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||| |||  || ||||  || | ||||| |||||||||||||||    
T  35190872 gtctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattg 35190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 12127895 - 12127987
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| |||||||||||||  ||||||||  || |||   || | ||||| ||||||||||||||| ||||||    
T  12127895 gtctagtggctagaattcaccttataaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcattgtcctacc 12127987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 16801898 - 16801818
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatg 319  Q
    |||||| || || |||| ||||||  |||||||||||||  |||||||||||| ||||| || ||||||| ||||||||||    
T  16801898 gtctagaggttagaatttatcttacaaggtgaataagtggtgtgtccggaattcgaaccccgactcctgcatataataatg 16801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 9438409 - 9438319
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| |||||||| |||| |||||||||  || ||||| |  | ||||| ||||||||||||||| ||||||    
T  9438409 ctagtggttagaattcaccttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcattgtcctacc 9438319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 16251511 - 16251601
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| ||| |||||| ||||| ||||||||||||| |||||||||| || ||||  || | ||||| ||||||  ||||||| ||||||    
T  16251511 ctagtgactagaattcaccttataaggtgaataagtggggtgtccggagttcgaacaacgacccctgcatataattgtgcattgtcctacc 16251601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 9424560 - 9424507
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtc 284  Q
    ||||||| |||||| | ||| |||||| ||||| ||||||||||||||||||||    
T  9424560 gtcagatagtctagcgactagaattcaccttataaggtgaataagtgaggtgtc 9424507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 24256999 - 24256942
Alignment:
Q  265 aggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    ||||||||||||| ||| |||||  || |||||||||| ||||| |||||||||||||    
T  24256999 aggtgaataagtggggtatccggggttcgaacctcggcccctgcatataataatgcat 24256942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 34396192 - 34396107
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||| ||| || |||||| ||||| |||||||||| |  |||||||||| || ||||  |||| ||||| |||||||||||||||    
T  34396192 gtctattggttagaattcaccttataaggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataatgcattg 34396107  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 753298 - 753390
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||| |||||||||||| ||| ||||||||| ||||||| |  || ||||| || | ||| | |||||||||| |||| ||||||    
T  753298 gtctagtagctagaattcatcttataaggggaataagtggggtgtccagggttcgaaccccgacccctacatataataatgtattgtcctacc 753390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 12101987 - 12101903
Alignment:
Q  247 gctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| |||||| ||||| ||||||||||||  |||||||||  || ||||  |||| ||||| |||||||||| |||| ||||||    
T  12101987 gctagaattcaccttataaggtgaataagtagggtgtccggggttcgaacgccggcccctgcatataataatgtattgtcctacc 12101903  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 331
Target Start/End: Original strand, 15288945 - 15289033
Alignment:
Q  243 agtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||| |||||| ||||| || |||||||||| |||||| ||| || ||||| | || ||| | |||||||||||| || ||||||    
T  15288945 agtggctagaattcaccttataagatgaataagtggggtgtctggagttcgaaccccagcccctacatataataatgcaatgtcctacc 15289033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 20716370 - 20716470
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| ||||| ||| || |||||||||||| || |||||||||| ||| || ||| || ||| | || | ||| | ||||||||||||||| |||||    
T  20716370 gtcagatagtctaatggttagaattcatcttataagatgaataagtggggtatctggagttcgaatcccgacccctacatataataatgcattgtcctac 20716469  T
Q  331 c 331  Q
    |    
T  20716470 c 20716470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 23771142 - 23771050
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| | |||||| |||||   |||||||| || |||||||||| || ||||| |  | ||||| ||||||||||||||| ||||||    
T  23771142 gtctagtggcaagaattcaccttatagagtgaataaatggggtgtccggagttcgaaccccttcccctgcatataataatgcattgtcctacc 23771050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 30566167 - 30566119
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    |||||||||||  |||||| ||||| ||||||||||||| |||||||||    
T  30566167 gtctagtggctggaattcaccttataaggtgaataagtggggtgtccgg 30566119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 35451107 - 35451192
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| | || ||||  || | ||||| |||||||||||||||    
T  35451107 gtctagtggctagaattcatcttataaggtgaataagtgaggtgtccgtagttcgaactccgacccctgcatataataatgcattg 35451192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 3465692 - 3465600
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||  |||| ||||| ||||||||||||||| ||||||    
T  3465692 gtctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcctacc 3465600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 10098234 - 10098142
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||||||||| || |||||||||| |||||||||  || ||| | |||| ||||| ||||||||||||||| ||||||    
T  10098234 gtctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaatcccggcccctgcatataataatgcattgtcctacc 10098142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 55656095 - 55656179
Alignment:
Q  240 tctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||||| ||||||||||||  ||||||||| ||||||||  |||| ||||| |||||||||| ||||    
T  55656095 tctagtggctagaattcatcttataaggtgaataagtagggtgtccgggatttgaactccggcccctgcatataataatgtattg 55656179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 17859885 - 17859795
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||||||||| |||  || ||||  |||| ||| ||||||||||||||||| ||||||    
T  17859885 ctagtggctagaattcaccttataaggtgaataagtgaggtgttcggggttcgaactccggcccctacgtataataatgcattgtcctacc 17859795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 47017938 - 47018024
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  47017938 tggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 47018024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 31601923 - 31601830
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| ||| | |||||| |||||||||||| ||||||||||||| |||||||||  || ||| |||||| ||||| ||||||||| |||||    
T  31601923 gtcagatagtcaaatggctagaattcatcttataaggtgaataagtggggtgtccggggttcgaatctcggcccctgcatataataatacattg 31601830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 6330925 - 6330980
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacc 297  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  6330925 tagtggctaaaattcaccttataaggtgaataagtggggtgtccgggatttgaacc 6330980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 548875 - 548965
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| ||||||||||| ||||| ||||||||||||| |||||| |   || ||||| |||| ||||| ||||||||||||||| ||||||    
T  548875 ctagtagctaaaattcaccttataaggtgaataagtggggtgtctgagtttcgaaccccggcccctgcatataataatgcattgtcctacc 548965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 20753113 - 20753195
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||| | ||||||||||||||    
T  20753113 ctagtggctagaattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcatt 20753195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 34773673 - 34773759
Alignment:
Q  243 agtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||||| |||||| ||||| | ||||||||||| |||||||||  || ||||||| || ||||| ||||||||||||||| ||||    
T  34773673 agtggctagaattcaccttataaagtgaataagtggggtgtccggggttcgaacctcagcccctgcatataataatgcattgtccta 34773759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 44074956 - 44074870
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||| ||| |||| ||    ||||| ||||||||||||||| ||||||    
T  44074956 tggctaaaattcaccttataaggtgaataagtggggtgtccgggattcgaacttcaatccctgcatataataatgcattgtcctacc 44074870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 39992942 - 39992855
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||| ||||| ||||| | || ||||| |||| |||||||||| ||||    
T  39992942 ctagtggctagaattcaccttataaggtgaataagtggggtgtccagaattcgaacc-cagcccctgcatatattaatgcattgtccta 39992855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 48512308 - 48512260
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  48512308 gtctagtggctaaaattcaccttataaggtgaataagtggggtgtccgg 48512260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 52560873 - 52560781
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| |||||||||||||| ||||  |   || ||||| |||| ||||| ||||||||||||||| ||||||    
T  52560873 gtctagtggctagaattcaccttataaggtgaataagtgaagtgtatgtggttcgaaccccggcccctgcatataataatgcattgtcctacc 52560781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 53697968 - 53698056
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    ||||| |||| |||||| ||||| |||| |||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||    
T  53697968 ctagttgctagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccta 53698056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 24234065 - 24234152
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||||| ||||| || |||||||||| |||||||||  ||  |||| |||| ||||| ||||||||||||||| ||||||    
T  24234065 gtggctagaattcaccttataagatgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcattgacctacc 24234152  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 35332976 - 35333066
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||||| |||||||| |||||||||| || ||||| |||| || ||||  ||||  |||| ||||||||||||||| ||||||    
T  35332976 ctagtggttaaaatgcatcttataaggtgaataaatggggtgttcggagttcgaactccggccactgcatataataatgcattgtcctacc 35333066  T

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Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 35747482 - 35747560
Alignment:
Q  253 attcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| ||||| ||||||||||||| |||||||||| || |||||||| | ||||| || |||||| ||||| ||||||    
T  35747482 attcaccttataaggtgaataagtggggtgtccggagttcgaacctcgacccctgcataaaataatacattgtcctacc 35747560  T

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Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 36008381 - 36008299
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||| |||||| ||||| ||||||||||||| ||||| |||  || ||||| |||| ||||| ||||| |||||||||    
T  36008381 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattg 36008299  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 9285645 - 9285737
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| |||| |||||||| |||||| ||  || ||||| | |  ||||| ||||||||||||||| ||||||    
T  9285645 gtctagtggctagaattcaccttataaggttaataagtggggtgtctggggttcgaaccccagaccctgcatataataatgcattgtcctacc 9285737  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 36576360 - 36576288
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| ||||||||||||| |||||||||  || ||||| |||  ||||  |||||||||||||||    
T  36576360 aattcatcttataaggtgaataagtggggtgtccggggttcgaaccgcggaccctgtatataataatgcattg 36576288  T

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Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 5430352 - 5430443
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaat-aagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||||  || |||||  ||  ||||| ||||||||| ||||| ||||||    
T  5430352 ctagtggctagaattcatcttataaggtgaataaagtggggtgtccggggttcgaaccctggtccctgcatataataatacattgtcctacc 5430443  T

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Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 6054076 - 6053997
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| ||||| ||||||||| ||| |||||  ||| || ||||| |||| ||||| ||||||||||||||| ||||||    
T  6054076 aattcaccttataaggtgaatacgtgtggtgtttggagttcgaaccccggcccctgcatataataatgcattgtcctacc 6053997  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 12868019 - 12868104
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| | |||||||||| ||||||||||||| | ||| ||| ||| ||||||| ||  |||| ||||||||||||||| ||||||    
T  12868019 tggctagagttcatcttataaggtgaataagtgggatgttcgggattcgaacctcagc-actgcatataataatgcattgtcctacc 12868104  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 35031438 - 35031400
Alignment:
Q  293 gaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  35031438 gaacctcggctcctgcatataataatgcattgtcctacc 35031400  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 37032172 - 37032250
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||| |||||| ||||| ||||||||||||| |||||||||  || ||| | || | ||||| |||||||||||||||    
T  37032172 ggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcattg 37032250  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 43115371 - 43115285
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||||  |||| |||||||||| || |||||||||  || ||| |||| | ||||| ||||||||| ||||| ||||||    
T  43115371 tggctaaaattcactttataaggtgaataaatggggtgtccggggttcgaatctcgacccctgcatataataatacattgtcctacc 43115285  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 50657987 - 50657897
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| |||||||||||||||| || |||||||||| | |||  ||| || |||||  | | ||||| ||||||||||||||| ||||||    
T  50657987 ctagtgactaaaattcatcttataagatgaataagtgggatgtttggagttcgaaccatgacccctgcatataataatgcattgtcctacc 50657897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 12820384 - 12820437
Alignment:
Q  232 tcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtcc 285  Q
    |||||| | |||||||||| |||||| ||||| ||||||||||||| |||||||    
T  12820384 tcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtcc 12820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 14149874 - 14149817
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  14149874 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 14149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 28520745 - 28520802
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  28520745 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 28520802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 32885794 - 32885705
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| || |||||| ||||| ||||||||||||| ||||||||   || ||||  || | ||||| ||||||||||||||| ||||||    
T  32885794 tagtggatagaattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctacc 32885705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 48968224 - 48968281
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  48968224 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 48968281  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 51077977 - 51077884
Alignment:
Q  239 gtctagtggctaaaattcatc-ttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| | |||| ||||||||||||| ||||| ||  ||| ||||  || | ||||| ||||||||||||||| ||||||    
T  51077977 gtctagtggctagaattcacccttataaggtgaataagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctacc 51077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 3442952 - 3442860
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| ||| || |||||| ||||| ||||||||||||| |||||| ||  || ||||| |||| ||  | ||||||||||||||| ||||||    
T  3442952 gtctactggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccccgacatataataatgcattgtcctacc 3442860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 9693043 - 9692987
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||    
T  9693043 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 9692987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 9924965 - 9924873
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| ||||||||| | ||  |||||||||||||  ||||||||  || ||||| || | ||||| ||||||||||| ||| ||||||    
T  9924965 gtctagtggataaaattcaccatacaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgcgttgtcctacc 9924873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 21476069 - 21476149
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgca 321  Q
    |||||||||| ||||||  |||| || |||||||||| | |||||||| || |||| ||| | ||||| ||||||||||||    
T  21476069 ctagtggctagaattcactttataagatgaataagtgggatgtccggagttcgaacatcgacccctgcatataataatgca 21476149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 42758146 - 42758232
Alignment:
Q  237 tggtctagtggctaaaattcatcttat--gaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcat 322  Q
    |||||||||||||| |||||||||| |   ||||||||||||| ||||||| |  || ||||| |||| ||||| |||||||||||||    
T  42758146 tggtctagtggctataattcatctttttgaaggtgaataagtggggtgtccagggttcgaacc-cggcccctgcatataataatgcat 42758232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 49280657 - 49280701
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtcc 285  Q
    ||||||| || |||||| ||||| |||||||||||||||||||||    
T  49280657 ctagtggttagaattcaccttataaggtgaataagtgaggtgtcc 49280701  T

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Target: scaffold1990 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 1011 - 911
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||||  ||||||||||| |||||| ||||| ||||||||||||| |||||| || ||| ||||| | || ||||| ||||||||||||||| |||||    
T  1011 gtcagatattctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctac 912  T
Q  331 c 331  Q
    |    
T  911 c 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 47295 - 47395
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||||  ||||||||||| |||||| ||||| ||||||||||||| |||||| || ||| ||||| | || ||||| ||||||||||||||| |||||    
T  47295 gtcagatattctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgcatataataatgcattgtcctac 47394  T
Q  331 c 331  Q
    |    
T  47395 c 47395  T

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Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 21884684 - 21884592
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| || |||||| ||||| ||||||||||||| |||||| ||  || |||||||||| ||||| ||||||||||||||| ||||||    
T  21884684 gtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctacc 21884592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 32711122 - 32711214
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||||||| |||||| ||  || ||||| |||| ||||| |||||||||||||||    
T  32711122 gtcagatagtctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggc-cctgcatataataatgcattg 32711214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 42832064 - 42831964
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | |||||| ||| |||||| ||||| ||||||||||||| |||||||||  |||||||| | || ||||| |||||||||||| || |||||    
T  42832064 gtcagatagcctagtgactagaattcaccttataaggtgaataagtggggtgtccggggtttgaaccccagcccctgcatataataatgcaatgtcctac 42831965  T
Q  331 c 331  Q
    |    
T  42831964 c 42831964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 4354096 - 4354183
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| ||||||  |||| ||||||||||||| |||||||| | || ||||| |||| ||||| ||||||||||||||| ||||||    
T  4354096 gtggctagaattcactttataaggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcattgtcctacc 4354183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 15368912 - 15368822
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| |  |||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  15368912 ctagtggctagaattcaccttataaaatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 15368822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 33059485 - 33059562
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||| |||||||||||| |||||||||||| |||||||||| ||| |||| |||| | |||| ||||||||||||||    
T  33059485 tggctataattcatcttataaggtgaataagtaaggtgtccgggattcgaacttcgg-ttctgcatataataatgcatt 33059562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 39433465 - 39433383
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||||   || |||| ||||| ||||| ||||||||||||||    
T  39433465 ctagtggctagaattcaccttataaggtgaataagtggggtgtccgaggttcgaacatcggcccctgcatataataatgcatt 39433383  T

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Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 15774301 - 15774390
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| || | ||| | ||||||||||||||| ||||||    
T  15774301 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctacc 15774390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 24636833 - 24636748
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||| |||||| |||| | ||||| |||||||||||||||||||||||| || ||||  |||||||| | |||||||||| ||||    
T  24636833 gtctaatggctagaatttaccttatcaggtgaataagtgaggtgtccggagttcgaactccggctcctacatataataatgtattg 24636748  T

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Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 30632370 - 30632455
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||| |||| || |||||| ||||| || |||||||||| ||||| ||| |||||||||||||| ||||| ||||| |||||||||    
T  30632370 gtctggtggttagaattcaccttataagatgaataagtgtggtgttcgggatttgaacctcggcccctgcatataacaatgcattg 30632455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 11405562 - 11405480
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| || | ||||| ||||| |||||||||    
T  11405562 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattg 11405480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 19793633 - 19793543
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| ||||||||||||| |||||||||  || |||   |||| ||||| ||||||||||||||| ||||||    
T  19793633 ctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaattccggcccctgcatataataatgcattgtcctacc 19793543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 35840108 - 35840174
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataat 318  Q
    |||||| ||||| || ||||||||||| |||| ||||||| |||||||| ||||||| |||||||||    
T  35840108 aattcaccttataagatgaataagtgaagtgttcggaattcgaacctcgactcctgcatataataat 35840174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 37733862 - 37733772
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| ||||||||||||| |||||||||  || ||||| || |  |||| ||||||||||||||| ||||||    
T  37733862 ctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatgcattgtcctacc 37733772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 331
Target Start/End: Original strand, 23463979 - 23464064
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||||| ||||| | ||||| ||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  23463979 ggctagaattcaccttataaagtgaacaagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 23464064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 39238797 - 39238740
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || |||||||||| ||||| |||||||||||||||    
T  39238797 gtgaataagtggggtgtccggggttcgaacctcggcccctgcatataataatgcattg 39238740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 39994826 - 39994919
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||| | ||||||| |||  |||| |||| ||| | ||||| |||||||||    
T  39994826 gtcagatagcctagtggctagaattcaccttataaggtgaataagtgggatgtccgggattcaaaccccggcccctacatataacaatgcattg 39994919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 538328 - 538400
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| ||||||||||||| ||||| |||  || ||||  |||| ||||| |||||||||||||||    
T  538328 aattcatcttataaggtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcattg 538400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 43555860 - 43555952
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| ||| || ||||| |||| |||||||| ||||||| |  |||||||| ||   ||||| ||||||||||||||| ||||||    
T  43555860 gtctagtggctagaatccaccttataaggtaaataagtggggtgtcctgggtttgaaccccgatccctgcatataataatgcattgtcctacc 43555952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 49606678 - 49606774
Alignment:
Q  234 agatggtctagtggctaaaattcatc-ttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||| ||||||||||||||||||| | |||| || |||||||||| |||||||| | || ||||  |||| ||| | ||||||||||||||| ||||    
T  49606678 agatagtctagtggctaaaattcacccttataagctgaataagtggggtgtccgaagttcgaactccggcccctacatataataatgcattgtccta 49606774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 38019935 - 38020026
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaattt-gaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| ||||||  |||| ||||||||||||| |||||| ||  ||| ||||  |||| ||||| ||||||||||||||| ||||||    
T  38019935 ctagtggctagaattcactttataaggtgaataagtggggtgtctggggtttcgaactccggcccctgcatataataatgcattgtcctacc 38020026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 38851723 - 38851652
Alignment:
Q  260 ttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||| ||||||| |||||||||||| || ||||||||| || | ||| | ||||||||||||||| ||||||    
T  38851723 ttataaggtgaacaagtgaggtgtctgggatttgaaccccgacacctacatataataatgcattgtcctacc 38851652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 39434725 - 39434642
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||| | |||||| ||||| ||||||||||||| ||||||||   || |||| ||||||||| | ||||| |||||||||    
T  39434725 ctagtggcaagaattcaccttataaggtgaataagtggggtgtccgaggttcgaacatcggctcctacatataacaatgcattg 39434642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 20357566 - 20357477
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| |||||||||||| || |||||||  || ||||| | || ||||| ||||||||||||||| ||||||    
T  20357566 ctagtggttagaattcaccttataaggtgaataagttagttgtccgg-gttcgaaccccagcccctgcatataataatgcattgtcctacc 20357477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 20562389 - 20562478
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| |||||||||||| || |||||||  || ||||| | || ||||| ||||||||||||||| ||||||    
T  20562389 ctagtggttagaattcaccttataaggtgaataagttagttgtccgg-gttcgaaccccagcccctgcatataataatgcattgtcctacc 20562478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 37490997 - 37490907
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| || |||||||| | ||||||||   || | ||| |||| ||||| ||||||||||||||| ||||||    
T  37490997 ctagtggctagaattcaccttataagatgaataagcggggtgtccgtggttcgtaccccggcccctgcatataataatgcattgtcctacc 37490907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 46116162 - 46116252
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||| ||||| |||||||||| || |||||||||  || ||||| | || ||||| ||| ||||||||||| ||||||    
T  46116162 ctagtggttagaattcaccttataaggtgaataattggggtgtccggggttcgaaccccagcccctgcatatgataatgcattgtcctacc 46116252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 49251383 - 49251473
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| || ||||||  |||| ||||||||||||| |||||| ||  || ||||| || | ||||| ||||||||||||||| ||||||    
T  49251383 ctagtggttagaattcacattataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctacc 49251473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 330
Target Start/End: Original strand, 3532962 - 3533050
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||| |||| |||||| ||||| ||||||||||||| |||||||||  || ||||| || | ||| | ||||||||||||||| |||||    
T  3532962 ctagtagctagaattcaccttataaggtgaataagtggggtgtccggggttggaacc-cgacccctacatataataatgcattgtcctac 3533050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 13870095 - 13870152
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| ||||||||| |||  |||| |||| ||||| |||||||||||||||    
T  13870095 gtgaataagtggggtgtccgggattcaaaccccggcccctgcatataataatgcattg 13870152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 17350142 - 17350085
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  17350142 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 17350085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 26619954 - 26619902
Alignment:
Q  270 aataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    ||||||||||||||||||| || ||||||||||  |||| ||||||||||||||    
T  26619954 aataagtgaggtgtccgga-ttcgaacctcggcatctgcatataataatgcatt 26619902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 331
Target Start/End: Original strand, 2208652 - 2208716
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||||| | |||| ||  ||||||||||| | ||||| ||||||||||||||| ||||||    
T  2208652 gtgaataagtgggatgtctggggtttgaacctcgtcccctgcatataataatgcattgtcctacc 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 6014517 - 6014561
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaac 296  Q
    |||||| ||||| ||||||||||||| ||||||||||||| ||||    
T  6014517 aattcaccttataaggtgaataagtggggtgtccggaattcgaac 6014561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 23345043 - 23345133
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| ||||| |||||||||||||  ||||  ||| || ||||| |||| ||||| ||||| ||||||||| ||||||    
T  23345043 gtctagtggctagaattcaccttataaggtgaataagtggagtgt-tggagttcgaacc-cggcccctgcatataacaatgcattgtcctacc 23345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 30519464 - 30519412
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatg 319  Q
    ||||||||||| |||||||||| ||||||| ||||| ||||| |||| |||||    
T  30519464 gtgaataagtggggtgtccggagtttgaacatcggcccctgcatatattaatg 30519412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 42762018 - 42762106
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||||||||| |||||| ||||  ||||||||||||| ||||||||| |||||||||||| | ||||| |||| |||||||||| ||||    
T  42762018 gtctagtggctagaattcacctta--aggtgaataagtggggtgtccgggatttgaacctcgacccctgcatatagtaatgcattgtccta 42762106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 10970373 - 10970291
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| |||  |||||||| | || ||||| ||||||||||||||    
T  10970373 ctagtggctagaattcatcttataaggtgaataagtggggtgttcggggtttgaaccccagcccctgcatataataatgcatt 10970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 14012718 - 14012636
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||||| || ||||| |||| ||||| ||||| |||||||||    
T  14012718 tagtggctaaaattcaccttataatgtgaataagtggggtgtccggacttcgaaccccggcccctgcatataacaatgcattg 14012636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 15042354 - 15042443
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| || |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  15042354 tagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctacc 15042443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 39484359 - 39484448
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| || |||||| ||||| || |||||||||| ||||||||| ||| ||||| |||| ||||| ||||||||||||||| ||||||    
T  39484359 tagtggttagaattcaccttataagatgaataagtggggtgtccggcattcgaaccccggcccctgcatataataatgcattgtcctacc 39484448  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 4798527 - 4798611
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||||| |||||| ||||  ||||||||||||| |||||||||  || ||||| |||| ||||| ||||||||||||||    
T  4798527 gtctagtggctagaattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatt 4798611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 43468683 - 43468783
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||| |||||||||| || ||||| || | ||| | ||||| ||||||||| |||||    
T  43468683 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcctac 43468782  T
Q  331 c 331  Q
    |    
T  43468783 c 43468783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 26703881 - 26703968
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||||| ||||| ||||||||||||||||||| ||| ||| ||||| || | | ||| ||||||||||||||| ||||||    
T  26703881 gtggctagaattcaccttataaggtgaataagtgaggtgttcgggattcgaaccccgacccttgcatataataatgcattgtcctacc 26703968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 36359704 - 36359783
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataat 318  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||||||||| ||| ||||  |||| ||||| |||||||||    
T  36359704 gtctagtggctagaattcaccttataaggtgaataagtggggtgtccgggattcgaactccggcccctgcatataataat 36359783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 23964771 - 23964679
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| |||||  ||||| |||||| ||||| | | ||||||||||||||| |||| ||| ||||||||| ||||| |||||||||||||||    
T  23964771 gtcagatagtctaacggctagaattcaccttataaagagaataagtgaggtgttcgga-tttaaacctcggcccctgcatataataatgcattg 23964679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 13702341 - 13702424
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattgg 325  Q
    ||||||||| |||||| ||||| |||||||||||||||||||| |   || ||||| || | ||||| ||||||||||||||||    
T  13702341 tagtggctagaattcaccttataaggtgaataagtgaggtgtctgaggttcgaaccccgacccctgcatataataatgcattgg 13702424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 324
Target Start/End: Complemental strand, 6064491 - 6064401
Alignment:
Q  234 agatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||| |||||||||||| |||||| ||||| || ||||||||||| |||||||   || ||||| || | ||||| |||||||||||||||    
T  6064491 agatagtctagtggctagaattcaccttataagctgaataagtgaagtgtccgaggttcgaaccccgacccctgcatataataatgcattg 6064401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 8034619 - 8034549
Alignment:
Q  259 cttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    ||||| ||||||||||||| ||||| |||  || ||||| |||||||||| ||||||||||||||| ||||    
T  8034619 cttataaggtgaataagtggggtgttcggggttcgaaccccggctcctgcatataataatgcattgtccta 8034549  T

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Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Original strand, 17987437 - 17987519
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||| |||||| ||||| |||||||||| || |||||||||  || ||||  |||| ||||| ||||||||||||||    
T  17987437 ctagtggctataattcaccttataaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcatt 17987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 24074613 - 24074523
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||   || |||| ||  | ||| | ||||||||||||||| ||||||    
T  24074613 ctagtggctagaattcaccttataaggtgaataagtgaggtgtccgaggttcgaacttcaacccctacatataataatgcattgtcctacc 24074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 9525059 - 9524974
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||||| ||||| ||||||||||||  |||||| ||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  9525059 ggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctacc 9524974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 331
Target Start/End: Original strand, 24608476 - 24608561
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||||| ||||| ||||||||||||  |||||| ||  || ||||| |||| ||||| ||||||||||||||| ||||||    
T  24608476 ggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctacc 24608561  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 10184787 - 10184879
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||||| |||||| ||||| |||||||||| ||  ||||||||| || ||||||| |  ||| | ||||||||||||||| ||||||    
T  10184787 gtctaatggctagaattcaccttataaggtgaataaatggagtgtccggagttcgaacctcagtccctacatataataatgcattgtcctacc 10184879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 10199731 - 10199819
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||| |||| |||||| ||||| ||||||||||||| |||||  ||  || ||||| |||| ||||| ||||||||||||||| |||||    
T  10199731 tagtagctagaattcaccttataaggtgaataagtggggtgtttggggttcgaaccccggcccctgcatataataatgcattgtcctac 10199819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 30942591 - 30942675
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||| |||||| ||||| |||| |||||||| ||||| |||  || ||||| |||| ||||| ||||||||||||||| ||||    
T  30942591 tggctataattcaccttataaggtaaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccta 30942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 34073225 - 34073309
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||| ||||||| |||||| ||||| ||||||||||||| |||||||||  || |||||| | | ||| | ||||||||||||||    
T  34073225 gtctcgtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcatt 34073309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 3226187 - 3226229
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtc 284  Q
    |||||||||||||||||||||| || |||||||||||| ||||    
T  3226187 tagtggctaaaattcatcttattagatgaataagtgagatgtc 3226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 331
Target Start/End: Complemental strand, 37219608 - 37219522
Alignment:
Q  245 tggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| |||||||||||| |||||||||| || |||||||||  |||||||| |  | ||||| |||||||||  |||| ||||||    
T  37219608 tggctagaattcatcttataaggtgaataaatggggtgtccggggtttgaaccccaacacctgcatataataatatattgtcctacc 37219522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 40249866 - 40249958
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagt--gaggtgtccggaatttgaacctcggctc-ctgcgtataataatgcattggcctacc 331  Q
    ||||||| || |||||||||||| ||||||||||||  |||||||||||| || ||| ||| | || |||| ||||||||||||||| ||||||    
T  40249866 ctagtggttagaattcatcttataaggtgaataagtgggaggtgtccggagttcgaa-ctccgatcactgcatataataatgcattgtcctacc 40249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 1032939 - 1033031
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| |||| |||| || |||||||||||| ||||||||||||| ||||| |||  || ||||  || | ||||| |||||||||||||||    
T  1032939 gtcagattgtctggtggttagaattcatcttataaggtgaataagtggggtgttcgg-gttcgaactccgacccctgcatataataatgcattg 1033031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 2696614 - 2696557
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  2696614 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 2696557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 2800100 - 2800043
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  2800100 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 2800043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 5184876 - 5184965
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| || |||||| ||||| ||||||||||||| ||||||| |  || ||||| | || ||||| ||||||||| ||||| ||||||    
T  5184876 tagtggttagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccagcccctgcatataataatccattgtcctacc 5184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 7314814 - 7314757
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || |||||||||| ||||| |||||||||| ||||    
T  7314814 gtgaataagtggggtgtccggggttcgaacctcggcccctgcatataataatgtattg 7314757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 7540473 - 7540566
Alignment:
Q  239 gtctagtggctaaaattcatc-ttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| |||||| | |||| ||||||||||||| | ||||| |  || ||||| || | ||||| ||||||||||||||| ||||||    
T  7540473 gtctagtggctataattcacccttataaggtgaataagtgggttgtccagggttagaaccccgacccctgcatataataatgcattgtcctacc 7540566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 11823064 - 11823023
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||| |||||||||||| ||||||||||||| |||||||||    
T  11823064 ggctagaattcatcttataaggtgaataagtggggtgtccgg 11823023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 14683985 - 14683901
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||| ||| |||||| ||||| ||||||||||||| | |||||||  || ||||| || | ||||| |||||||||||||||    
T  14683985 gtctagtgactagaattcaccttataaggtgaataagtgggatgtccggggttcgaaccccgac-cctgcatataataatgcattg 14683901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 30461643 - 30461566
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataat 318  Q
    |||||||||| |||||| ||||| ||||||||||||||| |||| ||| || ||||| | | | |||| |||||||||    
T  30461643 ctagtggctagaattcaccttataaggtgaataagtgagatgtctggagttcgaaccccaggtgctgcatataataat 30461566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 43874976 - 43875053
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||| ||||| ||||||||||||| |||||| ||  || ||||||| || ||| | ||||||||||||||| ||||    
T  43874976 aattcaccttataaggtgaataagtggggtgtctggtgttcgaacctcagcccctacatataataatgcattgtccta 43875053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 23239233 - 23239185
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||||||| |||||||||  |||| ||||||||||||| |||||||||    
T  23239233 gtctagtggttaaaattcactttataaggtgaataagtggggtgtccgg 23239185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 31373429 - 31373349
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatg 319  Q
    |||||||||||| |||||| ||||| |||||||||  || | ||||||| ||| ||||||| || ||| | ||||||||||    
T  31373429 gtctagtggctagaattcaccttataaggtgaatatatgggatgtccgggattcgaacctctgcccctacatataataatg 31373349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 33570418 - 33570462
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccg 286  Q
    ||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  33570418 tagtggctagaattcaccttataaggtgaataagtggggtgtccg 33570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 42761848 - 42761936
Alignment:
Q  237 tggtctagtggcta-aaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||| |||||| ||||||| ||||| | |||||||||||  |||||| || || ||||| || | ||||| |||||||||||||||    
T  42761848 tggtctattggctagaaattcaccttataaagtgaataagtggagtgtccagagttcgaaccccgccccctgcatataataatgcattg 42761936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 44070357 - 44070445
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||||| |||||| ||||| ||||||||||||  ||||||||   || ||||| |||| ||| | |||||||||| |||| |||||    
T  44070357 tagtggctagaattcaccttataaggtgaataagtagggtgtccgaggttcgaaccgcggcccctacatataataatgtattgtcctac 44070445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 35483378 - 35483287
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    |||||||||||| |||| | ||||| ||||||||||||| ||||||||| ||| ||||| || | ||||| ||||||||||||||| |||||    
T  35483378 gtctagtggctagaatttaccttataaggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcattgtcctac 35483287  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 33206864 - 33206774
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| | || ||||| ||||||||||||||| ||||||    
T  33206864 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtcctacc 33206774  T

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Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 31698650 - 31698558
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    ||||||| |||||||||||| |||||| ||||| || |||||||||| ||||| ||   || ||||| |||||||||| ||||||||||||||    
T  31698650 gtcagatagtctagtggctagaattcaccttataagatgaataagtggggtgttcgaggttcgaaccccggctcctgcatataataatgcatt 31698558  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 42271001 - 42271091
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||| |||||| ||||| ||||||||||||  |||||||||| || ||||| |||| ||||| ||||| ||||||||| ||||||    
T  42271001 ctagtagctagaattcaccttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcattgtcctacc 42271091  T

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Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 13874820 - 13874905
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||||| ||||| |||||||||| || | |||| || ||||||||| || | ||||| |||||||||||||||    
T  13874820 gtctagtggctagaattcaccttataaggtgaataaatgggatgtctgggatttgaaccccgacccctgcatataataatgcattg 13874905  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 14417974 - 14417885
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||  | || ||||| ||||||||||||||| ||||||    
T  14417974 tagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccagcccctgcatataataatgcattgtcctacc 14417885  T

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Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 35140828 - 35140743
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| |||| | ||||| |||||||||| || ||||||||| ||| | ||||||||  |||| |||||||||||||||    
T  35140828 gtctagtggctagaatttaacttataaggtgaataattggggtgtccgggattcgcacctcggccactgcatataataatgcattg 35140743  T

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Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 49146190 - 49146101
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||||| |||||| ||||| | ||||||||||| |||||||||  || ||||| || | ||||| ||||||||||||||| ||||||    
T  49146190 tagtggctagaattcaccttataaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcctacc 49146101  T

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Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 331
Target Start/End: Complemental strand, 20244251 - 20244151
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||| ||||||| ||| || |||||| ||||| ||||||||| |||| || |||||  || ||||| |||| ||||| ||||||||||||||| |||||    
T  20244251 gtcaggtggtctaatggttagaattcaccttataaggtgaatacgtgaagtatccggggttcgaaccccggcccctgcatataataatgcattgtcctac 20244152  T
Q  331 c 331  Q
    |    
T  20244151 c 20244151  T

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Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 45713576 - 45713497
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||| ||||| ||||||||||||| |||||||||| || ||||  |||| ||| | ||||||||||||||| ||||||    
T  45713576 aattcaccttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcattgtcctacc 45713497  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 47191480 - 47191397
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| |||  || ||||  | || ||||| |||||||||||||||    
T  47191480 ctagtggctagaattcatcttataaggtgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattg 47191397  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Original strand, 43566784 - 43566874
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||| |   || ||||| || | ||||| ||||||||||||||| ||||||    
T  43566784 ctagtggctagaattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcatataataatgcattgtcctacc 43566874  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 49639135 - 49639045
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||| |||||| ||||  ||||||||||||| ||||| |||  || ||||| |||| ||| | ||||||||||||||| ||||||    
T  49639135 ctagtggctagaattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctacc 49639045  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 323
Target Start/End: Original strand, 32508783 - 32508864
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    ||||||||| |||||| ||||| ||||||||||||| ||||| |||  || ||||| || | ||||| ||||||||||||||    
T  32508783 tagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcatt 32508864  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 37059553 - 37059472
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||| || |||||||||||| || |||||||||||||||| ||| ||| ||||  | || ||||| ||||||||||||||    
T  37059553 tagtggttagaattcatcttataagatgaataagtgaggtgttcgggattcgaactccagcccctgcatataataatgcatt 37059472  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 46328912 - 46328985
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataa 314  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| |||||    
T  46328912 ctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataa 46328985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 48173392 - 48173347
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  48173392 tagtggctagaattcaccttataaggtgaataagtgaggtgtccgg 48173347  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 21420187 - 21420267
Alignment:
Q  251 aaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| ||||| |||| |||||||| ||||||| | ||| |||||||| |  |||| ||||||||||||||| ||||||    
T  21420187 aaattcaccttataaggtaaataagtggggtgtccaggattcgaacctcgaccgctgcatataataatgcattgtcctacc 21420267  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 34344766 - 34344853
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggccta 329  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||||||   || |||  |||| ||||| ||||||||||||||| ||||    
T  34344766 ctagtggctagaattcaccttataaggtgaataagtggggtgtccgg-ggttaaactccggcacctgcatataataatgcattgtccta 34344853  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 16277950 - 16278029
Alignment:
Q  252 aattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| ||||||||||||| | |||||||| || ||| | || | ||||| ||||||||||||| | ||||||    
T  16277950 aattcatcttataaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcatggtcctacc 16278029  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 23820733 - 23820646
Alignment:
Q  244 gtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||||| |||||| ||||| || |||||||||| |||||| ||  || ||||  |||| ||||| ||||||||||||||| ||||||    
T  23820733 gtggctagaattcaccttataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatgcattgtcctacc 23820646  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 43774292 - 43774209
Alignment:
Q  241 ctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||| |||||| ||||| ||||||||||||| |||||| ||  || ||||| || | ||||| ||||| |||||||||    
T  43774292 ctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattg 43774209  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 9625092 - 9625007
Alignment:
Q  239 gtctagtggcta-aaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| ||||||| ||| | | ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  9625092 gtctagtggctagaaattca-cttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 9625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 40692305 - 40692239
Alignment:
Q  258 tcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||| || |||||||||||| | || || ||| |||||||||| ||||| |||||||||||||||    
T  40692305 tcttataagatgaataagtgagatttctgggattcgaacctcggcccctgcatataataatgcattg 40692239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 8175869 - 8175808
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcg 300  Q
    |||| ||||||| |||||| ||||| ||||||||||||| ||||| |||| || ||||||||    
T  8175869 gtctggtggctagaattcaccttataaggtgaataagtggggtgttcggagttcgaacctcg 8175808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 14271905 - 14271990
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataata 316  Q
    ||||||| ||||| |||||| |||||| ||||| || ||||||| ||||||||||||  || ||||  |||| ||||| |||||||    
T  14271905 gtcagatagtctaatggctagaattcaccttataagatgaataaatgaggtgtccggggttcgaactccggcccctgcatataata 14271990  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 27183695 - 27183752
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  || ||||| |||| ||||| |||||||||||||||    
T  27183695 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 27183752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 32665363 - 32665306
Alignment:
Q  266 ggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||||| |||||||||| |||||||| || | | ||| ||||||||||||||    
T  32665363 ggtgaataagtggggtgtccggagtttgaaccccgacccttgcatataataatgcatt 32665306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 36331712 - 36331797
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    |||||||||||| ||||||  || | | ||||||||||| |||||||||  || ||||| || | ||||| |||||||||||||||    
T  36331712 gtctagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattg 36331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 49019292 - 49019207
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||| || |||||| ||||| ||||||||||||| |||||| |  ||| ||||| || | ||| | |||||||||||||||    
T  49019292 gtctagtggttagaattcaccttataaggtgaataagtgcggtgtctgagattcgaaccccgacccctacatataataatgcattg 49019207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 13539950 - 13540042
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    ||||| |||||| |||||| ||||| |||| |||||||| |||||||||  || ||||| |  | ||| | ||||||||||||||| ||||||    
T  13539950 gtctaatggctagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccaacccctacatataataatgcattgtcctacc 13540042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 24537929 - 24537861
Alignment:
Q  246 ggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataa 314  Q
    ||||| |||||| ||||| ||||||||||||| |||||||||  || ||||| |||| ||||| |||||    
T  24537929 ggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataa 24537861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 50144584 - 50144640
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    ||||||| ||||||||| || |||||| ||||| |||||||||||||  ||||||||    
T  50144584 gtcagatagtctagtgggtagaattcaccttataaggtgaataagtggagtgtccgg 50144640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 331
Target Start/End: Complemental strand, 53468057 - 53467966
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctacc 331  Q
    |||||||||||| || ||  ||||| ||||||||||||| ||||||||   || ||||| | || ||||| ||||||||||||||| ||||||    
T  53468057 gtctagtggctagaaatctccttataaggtgaataagtggggtgtccgaggttcgaacc-ccgcccctgcatataataatgcattgtcctacc 53467966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 330
Target Start/End: Complemental strand, 9443 - 9344
Alignment:
Q  231 gtcagatggtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattggcctac 330  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||||  |||| ||||||| ||||| || | ||||| | ||||||||||||| |||||    
T  9443 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggagtgttcggaattcgaaccccgacccctgcatgtaataatgcattgtcctac 9344  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 451364 - 451446
Alignment:
Q  242 tagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||| |||||||||||| || |||||||||| |||||||||| || ||||| |||| ||| | ||||| |||||||||    
T  451364 tagtggctagaattcatcttataagatgaataagtggggtgtccggagttcgaaccccggcccctacatataacaatgcattg 451446  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 108375 - 108432
Alignment:
Q  267 gtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcattg 324  Q
    ||||||||||| |||||||||  |||||||||| || ||||| |||||||||||||||    
T  108375 gtgaataagtggggtgtccggggtttgaacctcagcccctgcatataataatgcattg 108432  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 101940 - 101856
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccggaatttgaacctcggctcctgcgtataataatgcatt 323  Q
    |||||||||||| |||||| ||||| ||||||||||||| | |||  ||  || ||||| |||| ||||| ||||||||||||||    
T  101940 gtctagtggctagaattcaccttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgcatataataatgcatt 101856  T

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Target: scaffold1086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 2597 - 2549
Alignment:
Q  239 gtctagtggctaaaattcatcttatgaggtgaataagtgaggtgtccgg 287  Q
    |||||||||||  |||||| ||||| ||||||||||||| |||||||||    
T  2597 gtctagtggctggaattcaccttataaggtgaataagtggggtgtccgg 2549  T

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