View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1556-Insertion-18 (Length: 271)
Name: NF1556-Insertion-18
Description: NF1556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1556-Insertion-18 |
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Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 30612453 - 30612191
Alignment:
| Q |
7 |
aatatttttctttgaaaactctagaaatcatagaattttggttgcttaagaatttacaacttttgttcccaacattgttagattgaacacctacaagtca |
106 |
Q |
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| T |
30612453 |
aatatttttctttgaaaactctagaaatcatagaatttgggttgcttaagaatttacaacttttgttcccaacattgttagattgaacacctacaagtca |
30612354 |
T |
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| Q |
107 |
tgaaattttccatgcctacccattcaatttatttctcttggttcgctttaacataatatcatcttttgaataacttctacaatagaattaggaagcaaga |
206 |
Q |
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| T |
30612353 |
tgaaattttccatgcctacccattcaatttatttctcttggttcgctttaacataatatcatcttttgaataacttctacaatagaattaggaagcaaga |
30612254 |
T |
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| Q |
207 |
tagaactaatgcaatatgaaacaatcacaaccttgtaggtaaggaaaatttcctcacaatatt |
269 |
Q |
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| T |
30612253 |
tagaactaatgcaatatgaaacaatcacaaccttgtaggtaaggaaaatttcctcacaatatt |
30612191 |
T |
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