View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15560_high_2 (Length: 250)
Name: NF15560_high_2
Description: NF15560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15560_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 30553008 - 30553233
Alignment:
| Q |
22 |
caccgccaccaccaccaccactcgtaagaggattcctgattccgcttccgattcaaagatccagttcacactcgaacacgctttcggcgattccgatttc |
121 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
30553008 |
caccaccaccaccaccaccactcgtaagaggattcctgattccgcttccgattcaaagatccagttcacactcgaacacgctttcggtgattccgatttc |
30553107 |
T |
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| Q |
122 |
tctgaagctggtaacttctctgctcgtctcaaaacttggagtcacggcgctcaggttcgtcaatttctttttaattgttgatatttttcaaagctagtat |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30553108 |
tctgaagctggtaacttctctgctcgtctcaaaacttggagtcacggcgctcaggttcgtcaatttctttttaattgttgatatttttcaaagctagtat |
30553207 |
T |
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| Q |
222 |
aataattcgttgattggttcttctct |
247 |
Q |
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|||||||||||||||||||||||||| |
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| T |
30553208 |
aataattcgttgattggttcttctct |
30553233 |
T |
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