View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15564_low_1 (Length: 497)

Name: NF15564_low_1
Description: NF15564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15564_low_1
NF15564_low_1
[»] chr7 (39 HSPs)
chr7 (13-482)||(10387624-10388100)
chr7 (24-483)||(21671558-21672024)
chr7 (13-482)||(3045918-3046397)
chr7 (21-445)||(8268650-8269088)
chr7 (30-445)||(42625891-42626318)
chr7 (118-482)||(10392363-10392727)
chr7 (186-454)||(3285032-3285296)
chr7 (94-315)||(26286578-26286800)
chr7 (30-482)||(4930589-4931051)
chr7 (118-483)||(12799849-12800215)
chr7 (128-482)||(2595295-2595651)
chr7 (178-445)||(27238674-27238943)
chr7 (275-482)||(3880586-3880792)
chr7 (166-315)||(10532290-10532438)
chr7 (194-315)||(10499561-10499681)
chr7 (194-315)||(10504590-10504710)
chr7 (140-462)||(23319403-23319727)
chr7 (97-481)||(16372838-16373219)
chr7 (30-223)||(26341574-26341776)
chr7 (318-471)||(44509675-44509827)
chr7 (191-314)||(13313722-13313844)
chr7 (191-315)||(9008671-9008794)
chr7 (24-315)||(30258460-30258764)
chr7 (166-278)||(10499678-10499791)
chr7 (166-278)||(10504707-10504820)
chr7 (318-482)||(26341872-26342035)
chr7 (142-259)||(44422629-44422746)
chr7 (399-482)||(12182033-12182117)
chr7 (175-303)||(15642766-15642894)
chr7 (24-75)||(3356767-3356818)
chr7 (13-95)||(27238605-27238688)
chr7 (140-299)||(6590472-6590625)
chr7 (118-302)||(4579961-4580151)
chr7 (246-362)||(15973345-15973461)
chr7 (166-276)||(13343994-13344102)
chr7 (140-223)||(40864915-40864998)
chr7 (28-95)||(13313896-13313964)
chr7 (162-222)||(16580712-16580772)
chr7 (238-302)||(43005131-43005198)
[»] chr2 (29 HSPs)
chr2 (15-482)||(40846855-40847334)
chr2 (30-482)||(1934259-1934721)
chr2 (30-479)||(9184688-9185146)
chr2 (140-482)||(30651401-30651742)
chr2 (30-479)||(9179997-9180455)
chr2 (95-445)||(25477597-25477950)
chr2 (95-480)||(12797367-12797751)
chr2 (178-483)||(19896552-19896846)
chr2 (95-259)||(25496814-25496978)
chr2 (140-315)||(17453048-17453216)
chr2 (166-299)||(19578029-19578163)
chr2 (30-315)||(31327117-31327414)
chr2 (318-437)||(24537333-24537452)
chr2 (140-397)||(29678241-29678502)
chr2 (147-259)||(42926134-42926246)
chr2 (30-223)||(17968489-17968691)
chr2 (13-87)||(17544957-17545031)
chr2 (318-482)||(17968230-17968393)
chr2 (30-219)||(18344790-18344988)
chr2 (319-482)||(12360914-12361076)
chr2 (318-482)||(19891747-19891910)
chr2 (318-445)||(18345076-18345203)
chr2 (95-219)||(19892003-19892126)
chr2 (326-445)||(34495400-34495521)
chr2 (19-95)||(28603657-28603734)
chr2 (140-258)||(7737354-7737473)
chr2 (359-445)||(25496692-25496778)
chr2 (320-480)||(15446572-15446733)
chr2 (191-259)||(30619405-30619473)
[»] chr4 (51 HSPs)
chr4 (13-462)||(6943131-6943583)
chr4 (13-427)||(13065125-13065548)
chr4 (13-445)||(16421388-16421834)
chr4 (38-482)||(37259131-37259584)
chr4 (30-482)||(37263831-37264292)
chr4 (38-479)||(31273890-31274339)
chr4 (13-471)||(55252012-55252483)
chr4 (30-482)||(51698284-51698750)
chr4 (20-397)||(19540530-19540920)
chr4 (13-474)||(12823163-12823636)
chr4 (38-354)||(31269401-31269726)
chr4 (140-482)||(33468269-33468615)
chr4 (147-481)||(33462626-33462968)
chr4 (171-482)||(13059976-13060290)
chr4 (97-302)||(15805088-15805293)
chr4 (13-462)||(23093465-23093914)
chr4 (30-223)||(5270950-5271150)
chr4 (147-482)||(19906731-19907069)
chr4 (13-224)||(32081653-32081867)
chr4 (30-315)||(19106976-19107272)
chr4 (266-445)||(32220870-32221049)
chr4 (318-482)||(5270691-5270854)
chr4 (95-312)||(19102420-19102639)
chr4 (30-223)||(31728918-31729118)
chr4 (319-482)||(31766538-31766700)
chr4 (140-259)||(39216594-39216713)
chr4 (30-224)||(5927743-5927946)
chr4 (318-482)||(8694378-8694541)
chr4 (140-312)||(42316066-42316240)
chr4 (30-223)||(31766238-31766440)
chr4 (16-95)||(40408568-40408647)
chr4 (318-482)||(5927485-5927648)
chr4 (157-308)||(42758297-42758452)
chr4 (191-299)||(26188138-26188246)
chr4 (147-310)||(47244634-47244799)
chr4 (147-312)||(8029779-8029947)
chr4 (30-223)||(8694080-8694282)
chr4 (320-482)||(31728633-31728794)
chr4 (13-218)||(13059758-13059971)
chr4 (226-381)||(30054431-30054586)
chr4 (140-315)||(43477472-43477640)
chr4 (285-445)||(32081472-32081630)
chr4 (119-314)||(48276093-48276291)
chr4 (255-350)||(2820407-2820501)
chr4 (266-483)||(16948608-16948824)
chr4 (158-259)||(55150090-55150191)
chr4 (260-315)||(12875024-12875078)
chr4 (252-315)||(39216521-39216583)
chr4 (362-482)||(39216371-39216490)
chr4 (239-302)||(29985190-29985253)
chr4 (140-223)||(41817243-41817326)
[»] chr8 (36 HSPs)
chr8 (13-482)||(26779466-26779955)
chr8 (15-437)||(23547927-23548360)
chr8 (16-474)||(18875664-18876132)
chr8 (30-461)||(15950840-15951282)
chr8 (13-481)||(1910221-1910703)
chr8 (13-380)||(38181610-38181991)
chr8 (123-384)||(2966099-2966359)
chr8 (13-479)||(17020698-17021177)
chr8 (13-479)||(17551135-17551614)
chr8 (95-474)||(1807889-1808267)
chr8 (95-470)||(24672605-24672979)
chr8 (140-482)||(40125162-40125507)
chr8 (15-380)||(19166996-19167375)
chr8 (140-445)||(17026411-17026711)
chr8 (140-445)||(17556903-17557203)
chr8 (30-476)||(44925188-44925651)
chr8 (178-445)||(33417052-33417322)
chr8 (13-302)||(22714441-22714739)
chr8 (212-302)||(7002209-7002299)
chr8 (343-482)||(17026831-17026968)
chr8 (343-482)||(17557323-17557460)
chr8 (118-223)||(31449415-31449520)
chr8 (13-95)||(2965997-2966080)
chr8 (30-258)||(36683947-36684187)
chr8 (119-315)||(17953407-17953607)
chr8 (147-223)||(4237891-4237967)
chr8 (147-223)||(4242630-4242706)
chr8 (194-302)||(15875138-15875249)
chr8 (275-360)||(18260461-18260546)
chr8 (340-410)||(33100079-33100149)
chr8 (228-281)||(28863956-28864009)
chr8 (267-315)||(17794090-17794137)
chr8 (211-302)||(27416063-27416153)
chr8 (17-95)||(28564470-28564549)
chr8 (13-79)||(28559333-28559399)
chr8 (140-223)||(37772166-37772250)
[»] chr6 (35 HSPs)
chr6 (13-440)||(19994705-19995141)
chr6 (13-475)||(17599717-17600193)
chr6 (140-483)||(17914072-17914416)
chr6 (13-474)||(11559491-11559967)
chr6 (13-445)||(2699396-2699842)
chr6 (13-482)||(16835431-16835906)
chr6 (94-482)||(20747569-20747958)
chr6 (13-445)||(12405670-12406085)
chr6 (30-479)||(6407131-6407589)
chr6 (13-474)||(11533981-11534457)
chr6 (95-440)||(33686956-33687303)
chr6 (13-438)||(4156661-4157104)
chr6 (17-445)||(25313756-25314199)
chr6 (17-445)||(26201250-26201693)
chr6 (147-482)||(14509463-14509801)
chr6 (128-482)||(11428430-11428789)
chr6 (13-205)||(22694854-22695055)
chr6 (276-438)||(22694676-22694838)
chr6 (33-354)||(11570138-11570472)
chr6 (322-482)||(5856650-5856809)
chr6 (97-314)||(12689416-12689634)
chr6 (318-482)||(8748425-8748588)
chr6 (318-474)||(17963834-17963989)
chr6 (140-295)||(2759865-2760019)
chr6 (30-223)||(17964085-17964287)
chr6 (13-95)||(11613417-11613499)
chr6 (191-302)||(12799399-12799510)
chr6 (147-224)||(22610037-22610114)
chr6 (13-57)||(11428358-11428402)
chr6 (386-482)||(11613176-11613271)
chr6 (252-315)||(15991152-15991214)
chr6 (386-445)||(11570000-11570059)
chr6 (269-315)||(19674403-19674448)
chr6 (266-302)||(22610126-22610162)
chr6 (349-441)||(32530436-32530528)
[»] scaffold0240 (1 HSPs)
scaffold0240 (94-480)||(4413-4800)
[»] chr1 (31 HSPs)
chr1 (15-440)||(19798308-19798746)
chr1 (13-445)||(38621056-38621500)
chr1 (95-482)||(39200029-39200417)
chr1 (13-314)||(16035970-16036280)
chr1 (20-445)||(47450527-47450966)
chr1 (95-482)||(16648902-16649289)
chr1 (30-482)||(25844120-25844584)
chr1 (95-440)||(33300551-33300901)
chr1 (140-440)||(16833958-16834262)
chr1 (256-482)||(20107953-20108180)
chr1 (238-445)||(8138212-8138410)
chr1 (140-315)||(7882468-7882648)
chr1 (140-315)||(12260477-12260652)
chr1 (30-223)||(10140462-10140662)
chr1 (30-223)||(10135694-10135894)
chr1 (30-223)||(26927247-26927449)
chr1 (318-482)||(10135990-10136153)
chr1 (318-482)||(26926988-26927151)
chr1 (212-353)||(11806819-11806961)
chr1 (13-162)||(40166338-40166495)
chr1 (38-223)||(51041037-51041231)
chr1 (20-315)||(39587792-39588107)
chr1 (140-314)||(23192261-23192439)
chr1 (318-482)||(10140758-10140921)
chr1 (331-482)||(51040789-51040939)
chr1 (118-223)||(3094528-3094633)
chr1 (94-299)||(28434088-28434290)
chr1 (186-314)||(40166493-40166624)
chr1 (264-370)||(10999271-10999377)
chr1 (13-84)||(11806700-11806771)
chr1 (403-482)||(11806958-11807037)
[»] scaffold0054 (2 HSPs)
scaffold0054 (13-481)||(29523-30001)
scaffold0054 (13-315)||(25803-26117)
[»] chr5 (48 HSPs)
chr5 (30-482)||(37248068-37248532)
chr5 (140-482)||(39518882-39519223)
chr5 (140-482)||(39523521-39523862)
chr5 (30-445)||(12103393-12103818)
chr5 (67-304)||(23757259-23757505)
chr5 (67-304)||(23822715-23822961)
chr5 (142-482)||(16115499-16115840)
chr5 (13-440)||(40148244-40148683)
chr5 (13-315)||(9726187-9726501)
chr5 (147-474)||(20180430-20180760)
chr5 (30-223)||(26667640-26667842)
chr5 (30-223)||(26939237-26939439)
chr5 (30-223)||(29167499-29167701)
chr5 (30-223)||(37549678-37549880)
chr5 (13-259)||(6513405-6513660)
chr5 (30-223)||(37652476-37652678)
chr5 (191-439)||(15414207-15414452)
chr5 (318-482)||(26667943-26668106)
chr5 (318-482)||(26939540-26939703)
chr5 (30-224)||(36429077-36429280)
chr5 (30-223)||(7452122-7452322)
chr5 (318-482)||(6154701-6154864)
chr5 (166-312)||(4872411-4872559)
chr5 (318-482)||(36424303-36424466)
chr5 (318-482)||(29167241-29167404)
chr5 (95-223)||(36424080-36424207)
chr5 (318-482)||(7452418-7452581)
chr5 (287-480)||(6511906-6512098)
chr5 (121-315)||(35679322-35679520)
chr5 (331-482)||(37537206-37537356)
chr5 (331-482)||(37646325-37646475)
chr5 (321-482)||(17162511-17162673)
chr5 (118-223)||(557135-557240)
chr5 (118-223)||(561907-562012)
chr5 (118-223)||(36941815-36941920)
chr5 (27-95)||(15414531-15414600)
chr5 (118-223)||(36937061-36937166)
chr5 (226-311)||(1429626-1429712)
chr5 (95-259)||(23688535-23688700)
chr5 (240-299)||(2859944-2860003)
chr5 (30-92)||(35679540-35679603)
chr5 (240-296)||(2848104-2848160)
chr5 (140-223)||(13301041-13301124)
chr5 (13-56)||(20180752-20180795)
chr5 (372-470)||(17159087-17159185)
chr5 (266-315)||(13290745-13290793)
chr5 (24-57)||(16115936-16115969)
chr5 (270-314)||(17162384-17162427)
[»] chr3 (45 HSPs)
chr3 (30-482)||(23665389-23665851)
chr3 (13-312)||(11399712-11400020)
chr3 (30-481)||(55326142-55326604)
chr3 (30-482)||(757630-758096)
chr3 (30-380)||(23660831-23661192)
chr3 (30-482)||(7570482-7570946)
chr3 (13-439)||(46964358-46964798)
chr3 (30-482)||(27709298-27709759)
chr3 (140-461)||(12965175-12965498)
chr3 (13-440)||(3419353-3419776)
chr3 (147-480)||(20520447-20520783)
chr3 (30-315)||(24037805-24038099)
chr3 (140-315)||(35456396-35456572)
chr3 (13-294)||(25726231-25726522)
chr3 (97-302)||(10708150-10708355)
chr3 (97-300)||(17025553-17025756)
chr3 (331-482)||(12111874-12112025)
chr3 (94-315)||(29350680-29350902)
chr3 (30-223)||(18467591-18467793)
chr3 (30-223)||(14438226-14438426)
chr3 (13-297)||(12112118-12112412)
chr3 (13-312)||(3656666-3656974)
chr3 (318-482)||(18467877-18468040)
chr3 (364-482)||(12971082-12971199)
chr3 (318-480)||(14437969-14438130)
chr3 (318-482)||(18472671-18472834)
chr3 (320-440)||(32473332-32473452)
chr3 (30-223)||(18472373-18472575)
chr3 (118-223)||(3034082-3034187)
chr3 (118-223)||(8070117-8070222)
chr3 (235-292)||(28125688-28125745)
chr3 (30-219)||(39775258-39775456)
chr3 (118-220)||(3693057-3693159)
chr3 (289-445)||(55431865-55432021)
chr3 (118-223)||(8888369-8888474)
chr3 (140-219)||(3673047-3673126)
chr3 (140-223)||(8883631-8883714)
chr3 (191-315)||(2207233-2207359)
chr3 (13-60)||(20520412-20520459)
chr3 (157-239)||(55431783-55431865)
chr3 (101-224)||(48431883-48432007)
chr3 (140-223)||(45904096-45904179)
chr3 (30-60)||(55431681-55431711)
chr3 (196-261)||(47540644-47540708)
chr3 (191-312)||(1640379-1640501)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-315)||(147825-148137)
[»] scaffold0352 (1 HSPs)
scaffold0352 (30-474)||(7472-7928)
[»] scaffold0002 (2 HSPs)
scaffold0002 (140-482)||(4547-4892)
scaffold0002 (13-456)||(443235-443692)
[»] scaffold0690 (2 HSPs)
scaffold0690 (222-482)||(5797-6055)
scaffold0690 (13-95)||(5647-5729)
[»] scaffold0057 (1 HSPs)
scaffold0057 (331-462)||(35802-35933)
[»] scaffold0008 (1 HSPs)
scaffold0008 (147-315)||(256281-256449)
[»] scaffold0182 (1 HSPs)
scaffold0182 (118-223)||(9431-9536)
[»] scaffold0011 (1 HSPs)
scaffold0011 (266-315)||(145856-145904)
[»] scaffold0018 (1 HSPs)
scaffold0018 (118-164)||(171356-171402)


Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 482
Target Start/End: Complemental strand, 10388100 - 10387624
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||          |||||||    
T  10388100 aatattgaaagaatatttatataccgttaagatcattctcaattccgatgagacattattgttccaaaagggactatattcttaaaagtactttttattc 10388001  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
     |||||| ||||| ||||||| |  |||| ||||| ||||| ||||||||||||||||||| ||||||||||||| ||||| |||| |||| |||||| |    
T  10388000 tgaaggggcatacattatcgacgaaactatgtttttaagacttttcttaattccgaagggacattataccgaataaggactaaggtcttaaaaacactat 10387901  T
Q  204 tacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || |||| |||||||| ||||   |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10387900 tatttccgaagggacaaaaaaa--agatgaggagaagaataactcgacaacacaagctggagggagaagagagaaagagttatcgacaactcaatagaaa 10387803  T
Q  304 ctctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagata 402  Q
    ||||||| ||||  ||| ||||| ||| ||||||||| | |||||||||||||||||| | ||||||||||||||||||||  ||||||||| || ||||    
T  10387802 ctctttgatgtgatttttgaactaagtggagtcctctatttatatagagattttgtaactattttagcaaaaattgcggcaacagttactctgatggata 10387703  T
Q  403 agatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||  |||||||||||||| | |||||||||| ||||  ||||| |||  |||| |||||||| || |||||||    
T  10387702 agatcaaaaaggaacttattcattatttagttcaacaacacttgtggataggat-caaaagaaacaaattcacaaaagtg 10387624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 24 - 483
Target Start/End: Original strand, 21671558 - 21672024
Alignment:
Q  24 aatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattccgaagggacat 114  Q
    |||||||||||| | |||||||||||||||||||||| |  | |||||| || |||||||||| ||||||||         |||||||||||||||||||    
T  21671558 aatatttatatagtattaagatcattcttaattccgacggaacattattatttcaaaagggaccatgatcttaaaagtactctttattccgaagggacat 21671657  T
Q  115 acgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaag 214  Q
    || ||   |||| || || ||||| |||| ||||||||||||| || ||| ||||||| ||||||||||| |||| ||| ||| ||||||| |||| |||    
T  21671658 actttt--gaagggattatgtttt-aagatctttcttaattccaaatggacattatactgaatagggactaaggtcttatgaaaactcttaattccgaag 21671754  T
Q  215 ggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    ||| ||||||  |||| || |||||||||| |||| |||||||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||| |    
T  21671755 ggaaagaaaaatgagacgaggagaagaatagctcgccaacacaagctggagggagaagagagaaaaagttctcagcaactcaatagaaactctttggtat 21671854  T
Q  315 gggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagt 413  Q
    |  ||| ||||||||| |||| |||| | |||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||||| ||||||||     
T  21671855 gatttttgaactgagtggagtactctatttatatagagattttgtaactgttttagcaaaaattgcggcaacagttaatctaatagataatatcaaaagg 21671954  T
Q  414 gaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtga 483  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||    
T  21671955 gaacttatccattaatcagttcaacaacacttgtggataagataaaaaagaaacaaatccataaaagtga 21672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 13 - 482
Target Start/End: Original strand, 3045918 - 3046397
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||    |||||||||||||||||||||||| | |||||          |||||||    
T  3045918 aatattgaaaaaatatttatatactattaagatcattattaattccgtcaggatattattgttccaaaagggactgtaatcttgaatgttctttttattc 3046017  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagaccttt-cttaattccgaagggatattat-accgaatagggacttaggtattaagaacact 201  Q
    ||||||||||||| ||| ||||| ||||| ||||| ||||| ||| ||||||| | |||||| ||||| || ||| | ||||| |||| ||| |||||||    
T  3046018 cgaagggacatacattaccgaagagactatgtttttaagacattttcttaatttcaaagggacattattacagaacaaggactaaggtcttaggaacact 3046117  T
Q  202 cttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaataga 301  Q
    |||| || | ||| ||||||||| ||||||||  |||||||||  || ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  3046118 cttattttcgaagcgacagaaaaaggagatgagaagaagaatagttcatcaacacaagctgaagggagaagagagaaagagttatcgccaactcaataga 3046217  T
Q  302 aactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaataga 400  Q
    |||| ||||||||    |||||||||||| || || ||| |  ||||||||| ||||||| |||||||||||||||||||| |  ||||||| |||| ||    
T  3046218 aactttttggtgtaatttttgaactgagtagaatcatctattgatatagaga-tttgtaactgttttagcaaaaattgcgg-aacagttactttaatgga 3046315  T
Q  401 taagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||||| |||||||| ||||||| |||||||||| ||||  |||||| || ||||||||||||||||| |||||||    
T  3046316 taagatcaaaagggaacttatccattaataagttcaacaacacttgtggataatattaaaaataaacaaatccacaaaagtg 3046397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 21 - 445
Target Start/End: Original strand, 8268650 - 8269088
Alignment:
Q  21 aataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaaggg 110  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||| || ||||||| |||||||||||||||         |||||||||||||||    
T  8268650 aataatatttatataccgttaagatcattcttaattccgacgagacattgttattccaaatagggactatgatcttaaaagtactctttattccgaaggg 8268749  T
Q  111 acatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttc 209  Q
    |||||  ||||||||  ||||| ||||| |||||| |||||||||||||||||| |||| |||||| | ||||||   || ||||||||||| ||| ||     
T  8268750 acatatattatcgaatggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatcgtcttaagaacactgttaattt 8268849  T
Q  210 caaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctgg---atggagaagagagaaagagttctcgacaactcaatagaaactc 306  Q
    | |||||| ||||||  ||||||| ||||||||  |||||||||||||||       | ||||||||||||||||||||||||||||||||| |||||||    
T  8268850 cgaagggatagaaaaatgagatgaagagaagaaagactcgtcaacacaagtcaacaaagggagaagagagaaagagttctcgacaactcaat-gaaactc 8268948  T
Q  307 tttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataaga 405  Q
    ||||||||    ||||||| |||| ||||||||| | ||| |||||||||| ||| ||||||||||||||||||| | | |||||||||||| |||||||    
T  8268949 tttggtgtaatttttgaaccgagtagagtcctctatttatttagagattttataactgttttagcaaaaattgcgacggaagttactctaatggataaga 8269048  T
Q  406 tcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    | ||||  ||  |||| |||||||||||||||||| ||||    
T  8269049 ttaaaatggagtttatccattaatcagttcaacaacactt 8269088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 30 - 445
Target Start/End: Complemental strand, 42626318 - 42625891
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| ||||| |||||||||         |||||||| |||||||||||  ||    
T  42626318 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggaatatgatcttaaaagtactctttattctgaagggacatatatt 42626219  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    || |||| ||||| ||||| |||||| |||||||||||| ||||| |||| |||||| |||||||  ||| ||||||||||||||  |||| ||||||||    
T  42626218 attgaagggactatgtttt-aagaccattcttaattccggagggacattaaaccgaaaagggactatggtcttaagaacactcttgattccgaagggaca 42626120  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt-g 315  Q
     |||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||| |||||||      
T  42626119 taaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactcattggtgtaa 42626021  T
Q  316 ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
      |||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||   |||| ||||||||||||||| |||| |||    
T  42626020 tttttgaactgagtggagtcctctatttatatagagattatgtaactgttttagcaaaaattgcgacaactgttattctaatagataagattaaaattga 42625921  T
Q  416 acttattcattaatcagttcaacaatactt 445  Q
      |||| |||||||||||| ||||| ||||    
T  42625920 gtttatccattaatcagtttaacaacactt 42625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 118 - 482
Target Start/End: Complemental strand, 10392727 - 10392363
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||| | ||||| ||||| ||||| ||| |||||| |||||||| || |||||||||||||| | |||| ||||||||| | ||| || | ||||||    
T  10392727 ttatcgacgagactatgttttcaagacattttttaatttcgaagggacat-ataccgaatagggattaaggtcttaagaacatttttattttcgaaggga 10392629  T
Q  218 cagaaaatg--gagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    || ||||    ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  10392628 caaaaaaaaaagagatgaggagaagaatagctcgtcaacacaagctggagggagaagagagaaagagttctagacaactcaatagaaactctttgatgtg 10392529  T
Q  316 -ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
       |||||||||||| ||||||||| | ||||||||||||||| || |||||| |||||||||||||||  | ||||| | || |||||||||||||       
T  10392528 atttttgaactgagtggagtcctctatttatatagagattttg-aactgttttggcaaaaattgcggcaacaattactttgatggataagatcaaaatga 10392430  T
Q  415 aacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||||| ||||||||||||||| || ||||  |||| |||   |||| ||||||||||| |||||||    
T  10392429 aacttatccattaatcagttcaataacacttgtggat-agaattaaaagaaacaaatccacaaaagtg 10392363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 186 - 454
Target Start/End: Original strand, 3285032 - 3285296
Alignment:
Q  186 aggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttc 285  Q
    |||| ||||||||| | ||| || | || ||||| |||| ||||| |  ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3285032 aggtcttaagaacatttttattttcgaatggacaaaaaaaggagacggggagaagaataattcgtcaacacaagctggagggagaagagagaaagagttc 3285131  T
Q  286 tcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcag 384  Q
    || |||||||||||||||||||||||| ||   ||| |||||||| ||||||||| |     |||||||||||||| | ||||||||||||| ||||||     
T  3285132 tccacaactcaatagaaactctttggtatgatttttaaactgagtggagtcctctat-----tagagattttgtaactattttagcaaaaatcgcggcaa 3285226  T
Q  385 tagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataag 454  Q
     |||||| ||||| |||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||    
T  3285227 cagttacactaatggataagatcaaaagggaacttatccattaatcagttcaacaacacttaaggataag 3285296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 94 - 315
Target Start/End: Complemental strand, 26286800 - 26286578
Alignment:
Q  94 ttctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    ||||||||||||||||||  ||  ||||||||   | || | ||| |||||| |||||||||||||||||| ||||||||||| | | |||  ||| |||    
T  26286800 ttctttattccgaagggatgtatattatcgaatgaaatatgcttttaagaccattcttaattccgaagggacattataccgaaaatgaactgtggtctta 26286701  T
Q  194 agaacactcttacttccaaagggacagaaa-atggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaa 292  Q
    |||| ||| ||| |||| |||||||||||| | | |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26286700 agaaaacttttagttccgaagggacagaaataagaagatgaggagaagaataactcgtcaacacaagctggagggagaagagagaaagagttctcgacaa 26286601  T
Q  293 ctcaatagaaactctttggtgtg 315  Q
    |||||||||||||||||||||||    
T  26286600 ctcaatagaaactctttggtgtg 26286578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 30 - 482
Target Start/End: Original strand, 4930589 - 4931051
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||||||||||| || | || ||| || ||||||| |||||||||||||||         |||||| | |||| |||||   ||    
T  4930589 tatataccgttaagatcattcttaattctgacgggacattgttattccaaatagggactatgatcttaaaagtactctttatcctgaagagacat---tt 4930685  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggac 218  Q
    ||||||| ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| | ||||||  ||| |||||||||||||||  ||  ||||||     
T  4930686 atcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactctta--tctgaagggat 4930783  T
Q  219 agaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    ||||||  |||||||| ||||||||  | ||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4930784 agaaaaaaggagatgaagagaagaaagattcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgt 4930882  T
Q  315 gggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagt 413  Q
    |  ||| ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||      
T  4930883 gttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatg 4930982  T
Q  414 ga-acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||   |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  4930983 gagttttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 4931051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 118 - 483
Target Start/End: Original strand, 12799849 - 12800215
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaaggg 216  Q
    ||||||||  ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| | ||||||  ||| |||| |||||||||| || | |||||    
T  12799849 ttatcgaatggactatgtttt-aagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaataacactcttaatttcgaaggg 12799947  T
Q  217 acagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtg 313  Q
    |||||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||  |||||||||||| ||||||||||||||    
T  12799948 acagaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagtttccgacaactcaat-gaaactctttggtg 12800046  T
Q  314 tgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaag 412  Q
    ||  ||| ||||| |||  |||||||| | ||||||| |||| ||||| ||||||||||||||||| | ||  |||||||||||| |||||||||||||     
T  12800047 tgttttttgaactaagtgaagtcctctatttatatagtgattctgtaactgttttagcaaaaattg-gacaacagttactctaatggataagatcaaaat 12800145  T
Q  413 tgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtga 483  Q
     ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| ||||||||    
T  12800146 ggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtga 12800215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 128 - 482
Target Start/End: Original strand, 2595295 - 2595651
Alignment:
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggacagaaaa-- 224  Q
    ||||| ||||| |||||| |||||||||||||||||| |||| |||||| | ||||||  ||| ||||||||||||||| || | |||||||||||||      
T  2595295 gactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactacggtcttaagaacactcttaatttcgaagggacagaaaaaa 2595394  T
Q  225 tggagatgatgagaagaataactcgtcaacacaagc---tggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt- 320  Q
    ||| ||||| || |||||  |||||||||||||||    |  | ||||||||||||||| |||| |||||||||||| |||||||||| |||||  |||     
T  2595395 tgg-gatgaagaaaagaaagactcgtcaacacaagtcaataaagggagaagagagaaagggttcccgacaactcaat-gaaactctttcgtgtgtttttt 2595492  T
Q  321 gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactta 420  Q
    ||||||||| |||||||||  || ||||||||||||| || ||||||||||||||||| | ||| ||||||| |||| |||||||| ||||   |  |||    
T  2595493 gaactgagtggagtcctct--atttatagagattttgcaactgttttagcaaaaattgtgacagcagttactttaatggataagattaaaatgcagttta 2595590  T
Q  421 ttcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    | |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  2595591 tccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 2595651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 178 - 445
Target Start/End: Original strand, 27238674 - 27238943
Alignment:
Q  178 agggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagag 274  Q
    |||||||  ||| ||||||||| ||||| || | ||||||||||||| |||||||| || |||||  ||||||||||||||| |  ||   |||||||||    
T  27238674 agggactatggtcttaagaacattcttaatttcgaagggacagaaaa-ggagatgaggaaaagaaagactcgtcaacacaagtcaagaaagggagaagag 27238772  T
Q  275 agaaagagttctcgacaactcaatagaaactctttggtgtgggt-ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaa 373  Q
    ||||||||||| |||||||||||| ||||||||||||||||  | ||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||    
T  27238773 agaaagagttcccgacaactcaat-gaaactctttggtgtgtttattgaactgagtggagtcctctatttatatagagattttgtaactgttttagcaaa 27238871  T
Q  374 aattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    ||||||   || ||||| | |||| |||||||| |||| |||  |||| |||||||||||||||||| ||||    
T  27238872 aattgcaatagcagttagtttaatggataagattaaaattgagtttatccattaatcagttcaacaacactt 27238943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 275 - 482
Target Start/End: Original strand, 3880586 - 3880792
Alignment:
Q  275 agaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaa 373  Q
    ||||||||||| |||||||||||| ||||||||||||||||  ||| ||||||||| ||||||||| | |||||||||||||||||| | ||||||||||    
T  3880586 agaaagagttcccgacaactcaat-gaaactctttggtgtgtttttagaactgagtggagtcctctatttatatagagattttgtaactattttagcaaa 3880684  T
Q  374 aattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcc 473  Q
    ||||||| ||| |||||||||||| |||| ||||||||  ||| |||| |||||||||||||||||| || |  ||||| |||  |||| ||||||||||    
T  3880685 aattgcgacagcagttactctaatggatacgatcaaaatggaatttatccattaatcagttcaacaacacctgtggataggat-caaaagaaacaaatcc 3880783  T
Q  474 ataaaagtg 482  Q
    | |||||||    
T  3880784 acaaaagtg 3880792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 166 - 315
Target Start/End: Complemental strand, 10532438 - 10532290
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggat 265  Q
    |||||||| |||||| ||| |||| ||||||||||||||| || |||||||||||||||  ||||||| |||||||||||||| | ||||||||| |||     
T  10532438 attataccaaataggaactaaggtcttaagaacactcttaatttcaaagggacagaaaaaagagatgaagagaagaataactcattaacacaagccggag 10532339  T
Q  266 ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||||||    
T  10532338 ggagaagagagaaagagttctcaaaaactcaattg-aactctttggtgtg 10532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 10499681 - 10499561
Alignment:
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaac 293  Q
    |||||||||||| ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||| || |||||    
T  10499681 agaacactcttaattccaaagggacagaaaaaagagatgaggagaagaataactcgttaacacaagctggaaggagaagagataaagagttatcaacaac 10499582  T
Q  294 tcaatagaaactctttggtgtg 315  Q
    ||||| | ||||||||||||||    
T  10499581 tcaattg-aactctttggtgtg 10499561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 10504710 - 10504590
Alignment:
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaac 293  Q
    |||||||||||| ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||| || |||||    
T  10504710 agaacactcttaattccaaagggacagaaaaaagagatgaggagaagaataactcgttaacacaagctggaaggagaagagataaagagttatcaacaac 10504611  T
Q  294 tcaatagaaactctttggtgtg 315  Q
    ||||| | ||||||||||||||    
T  10504610 tcaattg-aactctttggtgtg 10504590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 140 - 462
Target Start/End: Original strand, 23319403 - 23319727
Alignment:
Q  140 aagacctttcttaattccgaagg-gatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||||||||||||||| || | || |||||||| || || |||| |||| ||||||||||||||| |||| || |||| || ||  ||||| | ||||    
T  23319403 aagacctttcttaattccaaatgagacattatacccaacagagactaaggt-ttaagaacactcttaattccgaatggacggacaaaagagataaggaga 23319501  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg---ggtttgaactgagttgagtc 335  Q
    |||||| ||| |||| |||||||  | ||| |||||||||| | || ||||||||||||| ||||||||||||||||     |||||| ||||| ||| |    
T  23319502 agaatagctcatcaagacaagctaaagggaaaagagagaaataattatcgacaactcaat-gaaactctttggtgtgaaatttttgaattgagtggagac 23319600  T
Q  336 ctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttc 435  Q
     ||| | ||||| ||| |||||||| || | || | | |||||||||| ||||||||||  ||||||||||||| |   |||||| ||| ||||||||||    
T  23319601 ttctatttatattgaggttttgtaactgatataactataattgcggcattagttactcttgtagataagatcaagaagaaacttaatcactaatcagttc 23319700  T
Q  436 aacaatacttcaggataagataaaaaa 462  Q
    ||||| ||||  |||||||||||||||    
T  23319701 aacaacacttgtggataagataaaaaa 23319727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 97 - 481
Target Start/End: Original strand, 16372838 - 16373219
Alignment:
Q  97 tttattccgaagggacatacgt-tatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaag 195  Q
    |||||||||||||||||||    |||||||| ||||| ||| | |||||| |||||||||||||||||| |||||||| || ||  ||  || | |||||    
T  16372838 tttattccgaagggacataaaaatatcgaagggactatgttcttaagaccattcttaattccgaagggacattataccaaaaagaaaccaagatcttaag 16372937  T
Q  196 aacactcttacttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaact 294  Q
    |||||||||| |||  || |||||| |||| |||||||| ||||||||||||| || ||||||| |    ||||| |||||||||||||| | || ||||    
T  16372938 aacactcttaattctgaaaggacagaaaaaaggagatgaagagaagaataacttgttaacacaaac----tggaggagagagaaagagtttttgataact 16373033  T
Q  295 caatagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactc 393  Q
    |||||| ||||||||||||||   |||||| ||||| ||||||| | | |||||||  ||||||||| ||||||| | ||| ||||  ||  |  |||||    
T  16373034 caatag-aactctttggtgtgatttttgaattgagtggagtcctttatttatatagtaattttgtaactgttttaactaaatttgcaacaaca-atactc 16373131  T
Q  394 taatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagt 481  Q
    |||| ||||| ||||||||  ||||||  || ||||||||| | ||| ||||  |||||||||  |||| ||||||| ||| ||||||    
T  16373132 taatggataaaatcaaaaggaaacttaaccactaatcagtttagcaacacttgtggataagatccaaaagaaacaaaaccacaaaagt 16373219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 26341574 - 26341776
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  26341574 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtattctttattctgaagggacatatatt 26341673  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    |||  || |||||  |||| |||||| |||||||||||||||||| |||| |||||| ||||| |  ||| ||||||||||||||| |||| ||||||||    
T  26341674 atcacagggactatatttt-aagaccattcttaattccgaagggacattaaaccgaaaagggattatggtcttaagaacactcttaattccgaagggaca 26341772  T
Q  220 gaaa 223  Q
    ||||    
T  26341773 gaaa 26341776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 471
Target Start/End: Complemental strand, 44509827 - 44509675
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| || |||||| | |||||||| ||||| ||| ||||||||||||||||||| ||| |||||||||||| |||||||| ||||  |||     
T  44509827 tttgaactaagtggaatcctctatttatatagaaattttttaactgttttagcaaaaattgcgacagcagttactctaatggataagattaaaatggaat 44509728  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaat 471  Q
    |||| ||| |||||||| ||||| ||||  ||||| ||||||||| ||||||||    
T  44509727 ttatccatcaatcagtttaacaacacttgtggataggataaaaaa-aaacaaat 44509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 13313844 - 13313722
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcga 289  Q
    ||||||||||||||| |||| |||||||||||||  |||||||| ||||||||  ||||||||||||||| |  | |||||||||||||||||||| | |    
T  13313844 ttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaag-tcaagggagaagagagaaagagttcccta 13313746  T
Q  290 caactcaatagaaactctttggtgt 314  Q
    |||||||||| ||||||||||||||    
T  13313745 caactcaata-aaactctttggtgt 13313722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 315
Target Start/End: Original strand, 9008671 - 9008794
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgac 290  Q
    ||||||| ||||||| |||| ||||||  |||||   |||||| |||||||||| ||||| |||||| |||||| ||||||||  |||||||||||||||    
T  9008671 ttaagaatactcttaattccgaagggatggaaaaaaaagatgaagagaagaatagctcgttaacacaggctggagggagaagaaggaaagagttctcgac 9008770  T
Q  291 aactcaatagaaactctttggtgtg 315  Q
    |||| ||||| ||||||||||||||    
T  9008771 aactaaatag-aactctttggtgtg 9008794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 315
Target Start/End: Original strand, 30258460 - 30258764
Alignment:
Q  24 aatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttattccgaagggaca 113  Q
    ||||||||||||| |||||||||||| |||||| ||| | || |||||| || ||||| ||||||||||||||         ||| |||  ||||||||     
T  30258460 aatatttatatacagttaagatcattattaatttcgacgggacattattatttcaaaaagggactatgatcttaatagtacccttgattttgaagggact 30258559  T
Q  114 tacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaa 213  Q
    ||  ||||||||| ||||  |||||  | ||| |||||||||||||||||| |||| ||| || ||| ||   ||| ||||||| ||||||| || | ||    
T  30258560 tatattatcgaagggactgtgttttttataccattcttaattccgaagggacattaaacccaaaaggcacaatggtcttaagaagactcttaatttcgaa 30258659  T
Q  214 gggacag-aaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactcttt 309  Q
    ||||||| |||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||| ||||||| |  ||||||||||| ||||||||||    
T  30258660 gggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagaaaaagagtgcctgacaactcaat-gaaactcttt 30258758  T
Q  310 ggtgtg 315  Q
    ||||||    
T  30258759 ggtgtg 30258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 10499791 - 10499678
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaagggacaga-aaatggagatgatgagaagaataactcgtcaacacaagctgga 264  Q
    ||||||||||||||||| | |||| ||||||||||||||| ||| ||||||||||| |||   |||||| |||||||||| || || |||||||| ||||    
T  10499791 attataccgaatagggattaaggtcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaacacaagttgga 10499692  T
Q  265 tggagaagagagaa 278  Q
     |||||||||||||    
T  10499691 gggagaagagagaa 10499678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 10504820 - 10504707
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaagggacaga-aaatggagatgatgagaagaataactcgtcaacacaagctgga 264  Q
    ||||||||||||||||| | |||| ||||||||||||||| ||| ||||||||||| |||   |||||| |||||||||| || || |||||||| ||||    
T  10504820 attataccgaatagggattaaggtcttaagaacactcttaattctaaagggacagataaaaaaagatgaggagaagaatagcttgttaacacaagttgga 10504721  T
Q  265 tggagaagagagaa 278  Q
     |||||||||||||    
T  10504720 gggagaagagagaa 10504707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 26341872 - 26342035
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa- 416  Q
    |||||||| |||  |||||||| | |||||||||||| ||||| |||||| |||||||||||| ||  |||||||||||| |||||||| |||| ||||     
T  26341872 tttgaactaagtgaagtcctctatttatatagagattctgtaactgttttcgcaaaaattgcgacaacagttactctaatggataagattaaaa-tgaag 26341970  T
Q  417 cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     ||||  ||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  26341971 tttatctattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 26342035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 44422746 - 44422629
Alignment:
Q  142 gacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaaga 241  Q
    |||| |||||||||||||||||| |||| || ||| | | |||  ||| ||||||||||||||| |||| ||||||||||||| |||||||| || ||||    
T  44422746 gaccattcttaattccgaagggacattaaacggaaaaagaactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagaaaaga 44422647  T
Q  242 ataactcgtcaacacaag 259  Q
    |  |||||||||||||||    
T  44422646 aagactcgtcaacacaag 44422629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 399 - 482
Target Start/End: Complemental strand, 12182117 - 12182033
Alignment:
Q  399 gataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataa-aaaataaacaaatccataaaagtg 482  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||  ||||||||||| |||| ||||||||||| |||||||    
T  12182117 gataagatcaaaagagaacttatccattaatcagttcaacaacacttgtggataagataaaaaaagaaacaaatccacaaaagtg 12182033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 15642766 - 15642894
Alignment:
Q  175 aatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagag 274  Q
    |||| ||||| | |||||||||||||| ||| |||  |||||||| |||| |||||||| || |||||||  | || ||| ||| |||||||||||| ||    
T  15642766 aataaggactaatgtattaagaacactattaattctgaagggacataaaaaggagatgaggataagaatagattgttaacccaaactggatggagaatag 15642865  T
Q  275 agaaagagttctcgacaactcaatagaaa 303  Q
    |||| || |||| ||||||||||||||||    
T  15642866 agaatgatttcttgacaactcaatagaaa 15642894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 3356818 - 3356767
Alignment:
Q  24 aatatttatatactgttaagatcattcttaattccgatgagatattattgtt 75  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  3356818 aatatttatatacggttaagatcattcttaattccgacgagatattgttgtt 3356767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 27238605 - 27238688
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattatt-gttccaaaagggactatgatctt 95  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||| || ||||||||  ||| ||||||||||||| ||||    
T  27238605 aatattgaaagaatatttatatacctttaagatcattcttacttccgacgaaatattattatttcaaaaagggactatggtctt 27238688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 299
Target Start/End: Complemental strand, 6590625 - 6590472
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatg-gagatgatgaga 238  Q
    |||||||||||||||| |||| | | ||||||||| |||| |||| ||   |||| |||||||||| || | |||||||| |||| | ||||||| || |    
T  6590625 aagacctttcttaattacgaatgaacattataccgtatagagactaagaccttaaaaacactcttaatttcgaagggacaaaaaaagagagatgaggata 6590526  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaata 299  Q
    |||||||||||  ||||||| ||       ||||||| |||||||||||||||||||||||    
T  6590525 agaataactcgataacacaaact-------gaagagacaaagagttctcgacaactcaata 6590472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 302
Target Start/End: Original strand, 4579961 - 4580151
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | || ||| |||||||||| |||  || ||||||||||| ||||| |  ||| ||||||||||||||| |||||||||||    
T  4579961 ttatcgaagggactatgctcttaaaaccattcttaattctgaaatgacattataccgaaaagggattatggtcttaagaacactcttaattccaaaggga 4580060  T
Q  218 c---agaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    |   | |||| |||||||  |||| |||  | ||||||||||||| |  |  | ||||||||||||||||||||| ||||||||| |||||    
T  4580061 cataaaaaaaaggagatggggagaggaaagattcgtcaacacaagtcaagaaagggagaagagagaaagagttcttgacaactcactagaa 4580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 362
Target Start/End: Original strand, 15973345 - 15973461
Alignment:
Q  246 ctcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtata 344  Q
    ||||| |||||||| || | |||||||| |||||||||||||||||||  ||||| ||||||||  ||||   |||||||||||| ||||| | | |  |    
T  15973345 ctcgttaacacaagttgaagggagaagatagaaagagttctcgacaacctaatag-aactctttcatgtgctttttgaactgagtggagtcatttattca 15973443  T
Q  345 tatagagattttgtaatt 362  Q
    ||||||||||||||||||    
T  15973444 tatagagattttgtaatt 15973461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 13344102 - 13343994
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggat 265  Q
    ||||||| |||||| |||| || | ||||||||||||||| || |||| ||| || |||   | | ||||||||||||| ||| | |||||||||||||     
T  13344102 attatacagaatagagactaagatcttaagaacactcttaatttcaaaaggataggaaaa--aaaagatgagaagaatagctctttaacacaagctggag 13344005  T
Q  266 ggagaagagag 276  Q
    |||||||||||    
T  13344004 ggagaagagag 13343994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 40864998 - 40864915
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||| |||||| ||||||| ||||| || |||||  | |||||  ||| ||||||||||||||| |||| ||||||||||||    
T  40864998 aagaccattcttatttccgaaaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 40864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 13313964 - 13313896
Alignment:
Q  28 tttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt 95  Q
    ||||||||| ||||||||||||||||||| ||| | || ||| || ||||||| |||| ||||||||||    
T  13313964 tttatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggtctatgatctt 13313896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 16580712 - 16580772
Alignment:
Q  162 ggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaa 222  Q
    |||||||| |||||| ||||| |  ||| ||||||||||||||| |||| |||||||||||    
T  16580712 ggatattaaaccgaagagggattatggtcttaagaacactcttaattccgaagggacagaa 16580772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 43005131 - 43005198
Alignment:
Q  238 aagaataactcgtcaacacaagctggat--ggagaagagagaaagagttc-tcgacaactcaatagaa 302  Q
    ||||||||||||||||||||||||  ||  |||||||||||||| ||||| | |||||||||| ||||    
T  43005131 aagaataactcgtcaacacaagctaaatagggagaagagagaaaaagttctttgacaactcaagagaa 43005198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 15 - 482
Target Start/End: Complemental strand, 40847334 - 40846855
Alignment:
Q  15 tattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattccg 105  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||| | || |||||||||||||||||||||||||| ||         ||||||||      
T  40847334 tattgaaagaatatttatatacttttaagatcattcttaattacgacgggacattattgttccaaaagggactatgatattaaaagcactctttattctt 40847235  T
Q  106 aagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctta 205  Q
    |||||| ||| |||||| ||  | ||| ||||| |||||||||||||||| |||| ||| ||||||| ||||||||||| |||| |||||||||||||||    
T  40847234 aagggagatatgttatcaaaagggctatgtttttaagacctttcttaatttcgaatggacattatactgaatagggactaaggtcttaagaacactctta 40847135  T
Q  206 cttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
     || | |||||| ||||||  |||||||| |||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  40847134 ttttcgaagggatagaaaaaaggagatgaggagaagaatagctcgtcagcagaagctggatggagaagagagaaagaattctcgacaactcaatataaac 40847035  T
Q  305 tctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataa 403  Q
    ||||| |||||  ||| |||| |||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||  ||||| |||||| ||||     
T  40847034 tcttttgtgtgatttttgaaccgagtggagtcctctgtttatatagaaattttgtaattattttagcaaaaattgcggcaacagttattctaatggatag 40846935  T
Q  404 gatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataa-aaaataaacaaatccataaaagtg 482  Q
     ||||||||  || ||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||||||| |||||||    
T  40846934 tatcaaaaggaaatttattcattaatcagttcaacaacacttgtggataagataaaaaaagaaacaaatccacaaaagtg 40846855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 1934721 - 1934259
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  1934721 tatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtattctttattctgaagggacat---tt 1934625  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| || | |||||| || ||||  ||| |||||||||||||||  ||| ||||||||    
T  1934624 atcgaagggactatgtttttaagaccattcttaattccgaagggacatgaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggaca 1934525  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    ||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||     
T  1934524 gaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgt 1934426  T
Q  317 gttt--gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
     |||  ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| |||| ||    
T  1934425 ttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaa-tg 1934327  T
Q  415 aa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  1934326 aagtttatccattaatcagttcaacaacacttatggataggat-caaaagaaacaaatccacaaaagtg 1934259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 30 - 479
Target Start/End: Complemental strand, 9185146 - 9184688
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||| | ||||||||||   ||    
T  9185146 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttatcctgaagggacat---tt 9185050  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| ||||||||||||||| |||| ||||||||    
T  9185049 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttatttccgaagggaca 9184950  T
Q  220 gaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
     ||||  |||||||| ||||||||   |||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  9184949 aaaaaaaggagatgaagagaagaaaggctcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtg 9184851  T
Q  316 ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
      |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  ||    
T  9184850 tttttgaacttagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatgga 9184751  T
Q  416 acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
      |||| ||||||| |||||||||| ||||  ||||| |||  |||| ||||||||||| ||||    
T  9184750 gtttatccattaataagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaa 9184688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 140 - 482
Target Start/End: Original strand, 30651401 - 30651742
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||  |||| ||||||||||||| |||||||| ||||    
T  30651401 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaagggacagaaaaaggagatgaagaga 30651500  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcct 337  Q
    ||||  ||||||||||||||| |  | |||||||||||||||||||| ||||||||||||| |||||||||||||||   |||||||||||| |||||||    
T  30651501 agaaagactcgtcaacacaag-tcaagggagaagagagaaagagttcccgacaactcaata-aaactctttggtgtgttttttgaactgagtggagtcct 30651598  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttca 436  Q
    || | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||| | |||||||| |||| ||||  |||| ||||||||||||||    
T  30651599 ctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctagtggataagattaaaa-tgaagtttatccattaatcagttca 30651697  T
Q  437 acaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  30651698 acaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 30651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 30 - 479
Target Start/End: Complemental strand, 9180455 - 9179997
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| ||| |||||||||||         |||||| | ||||||||||   ||    
T  9180455 tatataccgttaagatcattcttaattccgacgggacattgttattccaaataggaactatgatcttaaaagtactctttatcctgaagggacat---tt 9180359  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| |||||  |||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| ||||||||||||||| |||| ||||| ||    
T  9180358 atcgaagggactatttttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaattccgaaggggca 9180259  T
Q  220 gaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||  |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  9180258 gaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacatctcaat-gaaactctttggtgtg 9180160  T
Q  316 ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
      |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  ||    
T  9180159 tttttgaacttagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatgga 9180060  T
Q  416 acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
      |||| ||||||| |||||||||| ||||  ||||| |||  |||| ||||||||||| ||||    
T  9180059 gtttatccattaataagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaa 9179997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 95 - 445
Target Start/End: Complemental strand, 25477950 - 25477597
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||    
T  25477950 tctttattctgaagggacatatattatcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaa 25477852  T
Q  195 gaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagct--ggatg-gagaagagagaaagagttctcgac 290  Q
     |||||| ||| || | |||||||||||||  |||||||| ||||||||  |||||||||||||||    | | | ||||||||||||| || || ||||    
T  25477851 aaacacttttaatttcgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagagagaagagagaaatagctcccgac 25477752  T
Q  291 aactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagtt 389  Q
    |||||||| ||||||||||||||||  ||| ||| ||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||| ||||    
T  25477751 aactcaat-gaaactctttggtgtgttttttgaattgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacagcagtt 25477653  T
Q  390 actctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
    |||||||| |||||||| |||| ||||  ||||||||||||||||||||||| ||||    
T  25477652 actctaatggataagattaaaa-tgaagtttattcattaatcagttcaacaacactt 25477597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 95 - 480
Target Start/End: Original strand, 12797367 - 12797751
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||| ||||| ||||| |||| | |||||||||| ||||||| |||| |||||| |||||||  ||||||||    
T  12797367 tctttattctgaagggacatatattatcgaagggactatgtttt-aagagcattcttaattctgaagggacattaaaccgaaaagggactatggtattaa 12797465  T
Q  195 gaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgaca 291  Q
    ||||||||||| |||| ||||||||||||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||| ||||||||  |||||    
T  12797466 gaacactcttaattccgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagataaagagtttccgaca 12797565  T
Q  292 actcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttac 391  Q
    ||||||| |||||||||||||||   ||| || |||||  |||||||| | |||||||||| ||||||| ||||||||| ||||||||| ||  |||  |    
T  12797566 actcaat-gaaactctttggtgt-tttttaaattgagtgcagtcctctatttatatagagaatttgtaactgttttagcgaaaattgcgacaacagtcgc 12797663  T
Q  392 tctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaag 480  Q
    |||||| |||||||| ||||  ||  |||| ||||||||| |||||||| ||||  ||||| |||  |||| ||||||||||| |||||    
T  12797664 tctaatggataagattaaaatggagtttatccattaatcatttcaacaacacttgtggatatgat-caaaagaaacaaatccacaaaag 12797751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 178 - 483
Target Start/End: Original strand, 19896552 - 19896846
Alignment:
Q  178 agggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagaga 277  Q
    ||||||| |||| ||||||||||||||  || | |||||||  ||||  ||||||| |||||||||| |||||||| ||||||||       ||||||||    
T  19896552 agggactaaggtcttaagaacactctttttttcgaagggacgtaaaaatgagatgaggagaagaatagctcgtcaagacaagctg-------aagagaga 19896644  T
Q  278 aagagttctcgacaactcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaatt 377  Q
    ||| |||  ||||||||||||||||||| ||||||||   |||    ||||   |||||||| | |||||||||||||||||||||||||| ||||||||    
T  19896645 aagtgtttccgacaactcaatagaaactttttggtgtaatttt----tgag---agtcctctatttatatagagattttgtaattgttttaacaaaaatt 19896737  T
Q  378 gcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagat---aaaaaataaacaaatcca 474  Q
    ||||||| ||||| |||||  |||||||||||||| |||||||| ||| ||||||||||| || ||||  |||| ||||   |||||| |||| ||||||    
T  19896738 gcggcaggagttagtctaacggataagatcaaaagggaacttatccataaatcagttcaataacacttgtggatgagataagaaaaaaaaaacgaatcca 19896837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 95 - 259
Target Start/End: Complemental strand, 25496978 - 25496814
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| ||||||| |||| ||||    
T  25496978 tctttattctgaagggacatatattatcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactaaggtcttaa 25496880  T
Q  195 gaacactcttacttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaag 259  Q
    ||||||||||| |||| ||||||||| |||| |||||||| ||||||||  | |||||||||||||    
T  25496879 gaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagattcgtcaacacaag 25496814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 17453216 - 17453048
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| |||||||||||||||| | | ||||| ||| | |||||| ||| |||||| |||||||| |||||||||||||||||   ||||||| |||||    
T  17453216 aagaccattcttaattccgaaggaacaatatactgaaaaaggactttggtcttaagagcactcttaattccaaagggacagaaagaagagatgaagagaa 17453117  T
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||| || || ||||||||      |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17453116 gaatagcttgttaacacaag------ggagaagagagaaagagttctcgacaactcaata-aaactctttggtgtg 17453048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 166 - 299
Target Start/End: Complemental strand, 19578163 - 19578029
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaa-gggacagaaaatggagatgatgagaagaataactcgtcaacacaagctgga 264  Q
    |||||||||||||| |||| || | ||||||||||||||| ||||||| ||||||||||| |||||||| ||||| |||||||||| |||| |  |||||    
T  19578163 attataccgaatagagactaagttcttaagaacactcttaattccaaaagggacagaaaaaggagatgaggagaaaaataactcgttaacaaaccctgga 19578064  T
Q  265 tggagaagagagaaagagttctcgacaactcaata 299  Q
     ||||||||||||||||||| ||||||||||||||    
T  19578063 gggagaagagagaaagagttttcgacaactcaata 19578029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 31327117 - 31327414
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    |||||||  ||||||||||||||||||| || | || ||| || ||||||| |||||||||||||||          |||||| ||||||||||||  ||    
T  31327117 tatataccattaagatcattcttaattctgacgggacattgttattccaaatagggactatgatcttaaaagtactttttatttcgaagggacatatatt 31327216  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaat-agggacttaggtattaagaacactcttacttccaaagggac 218  Q
    |||||||  |||| ||||| |||||| |||||||||||||||||| |||  ||||||  |||||||  ||| ||||||||||||||| || | |||||||    
T  31327217 atcgaaggaactatgtttt-aagaccattcttaattccgaagggacattgaaccgaaacagggactatggtcttaagaacactcttaatttcgaagggac 31327315  T
Q  219 agaaaatggagatgatgagaagaataactcgtcaacacaag---ctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    | |||| |||||||| ||||||||  ||| |||||||||||       | |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  31327316 aaaaaaaggagatgaagagaagaaagacttgtcaacacaagtcaaaaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtg 31327414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 24537452 - 24537333
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||| ||| | ||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||  |||||||||||| |||||||||||||| |||     
T  24537452 tttgaattgattagagtcctctctatatatagagcttttgtaactgttttagcaaaaattgcgccaacagttactctaatggataagatcaaaagagaat 24537353  T
Q  418 ttattcattaatcagttcaa 437  Q
    |||| |||||||||||||||    
T  24537352 ttatccattaatcagttcaa 24537333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 397
Target Start/End: Original strand, 29678241 - 29678502
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||| | ||| | ||||||||||||||  ||| ||||||||||||||| |||  |||| ||||||||  ||||||| ||||    
T  29678241 aagaccattcttaattccgaaggaacatttaaaccgaatagggactatggtcttaagaacactcttaattctgaaggaacagaaaaatgagatgaagaga 29678340  T
Q  239 agaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttg--gtgtgggtttgaactgagttgag 333  Q
    ||||  ||||||||||||||| |  |  | |||||||||||||||||||| |||||||||||| |||| ||||||  ||||   ||| |||| ||| |||    
T  29678341 agaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttc-cgacaactcaat-gaaattctttgatgtgtttttttaaactaagtggag 29678438  T
Q  334 tcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
    |||||  | |||||||||| | ||||| ||||||||||||||||||| ||  | ||||||||||    
T  29678439 tcctcaatttatatagagagtctgtaactgttttagcaaaaattgcgacaacaattactctaat 29678502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 42926246 - 42926134
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataac 246  Q
    |||||||||| ||||||| |||| |||||| ||| |||  ||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||||  ||    
T  42926246 ttcttaattctgaagggacattaaaccgaaaaggaactatggtattaagaacactcttaattccgaagggacagaaaaaggagatgaagagaagaaagac 42926147  T
Q  247 tcgtcaacacaag 259  Q
    |||||||||||||    
T  42926146 tcgtcaacacaag 42926134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 17968691 - 17968489
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| || |||||||||||||||||| | | || ||| || ||||||| |||||||||||||||         |||||||  |||||||||||  ||    
T  17968691 tatataccgtgaagatcattcttaattccaacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattttgaagggacatatatt 17968592  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||| ||| |||| ||||||||    
T  17968591 atcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacacttttaattccgaagggaca 17968493  T
Q  220 gaaa 223  Q
    ||||    
T  17968492 gaaa 17968489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 17545031 - 17544957
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggact 87  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  17545031 aatattgaaagaatatttatatactgttaagatcattcttaattccgacgagacattattgtttcaaaagggact 17544957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 17968393 - 17968230
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||| ||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  17968393 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttaccaaaaattgcgacaacagttactctaatggataagattaaaatagagt 17968294  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  ||||  |||||||||| |||||||    
T  17968293 ttatccattaatcagttcaacaacacttgtggataggat-caaaaggaacaaatccacaaaagtg 17968230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 18344790 - 18344988
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||          ||||||| |||||||||||  ||    
T  18344790 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactatttattctgaagggacatatatt 18344889  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| ||||| |||||||| ||| |||| ||| || |||||||  ||| ||||||||||||||| |||| ||||||||    
T  18344890 atcgaagggactatgtttt-aagaccattcttcattccgaaaggacattaaaccaaaaagggactatggtcttaagaacactcttaattccgaagggaca 18344988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 482
Target Start/End: Original strand, 12360914 - 12361076
Alignment:
Q  319 ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-c 417  Q
    ||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| | | |||||||||||| ||||| || |||| ||||      
T  12360914 ttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacggcagttactctaatggataaaattaaaa-tgaagt 12361012  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||   |||| |||  |||| ||||||||||| |||||||    
T  12361013 ttatccattaatcagttcaacaacacttgttgataggat-caaaagaaacaaatccacaaaagtg 12361076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 19891910 - 19891747
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| | ||||||||||||||||| || ||||| ||||||| |||||||| ||||  ||      
T  19891910 tttgaactaagtggagtcctctatttatatagagattctgtaactattttagcaaaaattgcgacaatagtttctctaatggataagattaaaatggact 19891811  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||| || |||||||||| ||||  |||||| ||  |||| ||||||||| | |||||||    
T  19891810 ttatccattgattagttcaacaacacttgtggataaaat-caaaagaaacaaatctacaaaagtg 19891747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 18345076 - 18345203
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| | ||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  ||| |||||||| |||||||| ||||  ||      
T  18345076 tttgaactaagtggggtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagtcactctaatggataagattaaaatggagt 18345175  T
Q  418 ttattcattaatcagttcaacaatactt 445  Q
    |||| ||||| |||||||||||| ||||    
T  18345176 ttatccattagtcagttcaacaacactt 18345203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 19892126 - 19892003
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||  ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  | | ||||    
T  19892126 tctttattctgaagggacatatattatcgaatggactatgtttt-aagaccattcttaattctgaagggacattaaaccgaaaagggactatgatcttaa 19892028  T
Q  195 gaacactcttacttccaaagggaca 219  Q
    ||||||||||| |||| ||| ||||    
T  19892027 gaacactcttaattccgaagcgaca 19892003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 34495521 - 34495400
Alignment:
Q  326 gagttgagtcctctgtatatatagagat--tttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattc 423  Q
    |||| ||||||||| | |||||||||||  ||||||| |||||||||  |||||||| ||  | |||||||||| ||||||||||||||  ||||||  |    
T  34495521 gagtggagtcctctatttatatagagatattttgtaactgttttagctgaaattgcgacaacaattactctaatggataagatcaaaaggaaacttaacc 34495422  T
Q  424 attaatcagttcaacaatactt 445  Q
    | ||||||||||||||| ||||    
T  34495421 actaatcagttcaacaacactt 34495400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 28603657 - 28603734
Alignment:
Q  19 gaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt 95  Q
    |||||||||||||||||| ||||||||||||||||||| ||| | || ||| || ||||||| |||||||||||||||    
T  28603657 gaaataatatttatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggactatgatctt 28603734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 7737473 - 7737354
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacag-aaaatggagatgatgaga 238  Q
    |||||| ||||||||||| |||||| |||| |||| | |||||||  ||| |||||||| ||||||  ||| ||||||||| ||||  || |||| ||||    
T  7737473 aagaccattcttaattccaaagggacattaaaccgtaaagggactatggtcttaagaacgctcttaactccgaagggacagaaaaaatgatatgaagaga 7737374  T
Q  239 agaataactcgtcaacacaa 258  Q
    |||| |||||||||||||||    
T  7737373 agaaaaactcgtcaacacaa 7737354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 445
Target Start/End: Complemental strand, 25496778 - 25496692
Alignment:
Q  359 aattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
    ||||||||||||| |||||||| ||  |||||||||||| |||||||| |||| ||||  ||||||||||||||  ||||||| ||||    
T  25496778 aattgttttagcacaaattgcgacaacagttactctaatggataagattaaaa-tgaagtttattcattaatcaagtcaacaacactt 25496692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 480
Target Start/End: Complemental strand, 15446733 - 15446572
Alignment:
Q  320 tgaactgagttgagtcctctgtatatatagagattttgtaattgt-tttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaact 418  Q
    ||||||||||  | |||||| | |||||||||| ||| ||| ||| |||||| |||| |||| ||  | |||||||  | ||||||||||||||  ||||    
T  15446733 tgaactgagtaaaatcctctatttatatagagactttttaactgtatttagctaaaactgcgtcaacaattactcttgtggataagatcaaaaggaaact 15446634  T
Q  419 tattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaag 480  Q
     |  || |||||||||||| ||  ||| ||||||||||||||||  |||||| ||| |||||    
T  15446633 aacccactaatcagttcaaaaactcttgaggataagataaaaaagtaacaaacccacaaaag 15446572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 30619405 - 30619473
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag 259  Q
    |||||||| || ||| |||  |||||||| |||| |||||||| |||||||| || |||||||||||||    
T  30619405 ttaagaactcttttaattctgaagggacataaaaaggagatgaagagaagaaaaattcgtcaacacaag 30619473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 462
Target Start/End: Original strand, 6943131 - 6943583
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||| | || |||||| ||||||||||||||||||||||          |||||||    
T  6943131 aatattgaaagaatatttatataccattaagatcattcttaattccgacgcgacattattattccaaaagggactatgatcttaaaaatactatttattc 6943230  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    |||| |||||||  ||||||||| |||||  |||| ||||||||||||||||| ||||||| ||||||||||||| ||||| |||| |||||||||||||    
T  6943231 cgaatggacatatattatcgaagagactatttttttaagacctttcttaattctgaagggacattataccgaatatggactaaggtcttaagaacactct 6943330  T
Q  204 tacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || |||| |||||||| |||| ||||| || || ||||||| || |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6943331 taattccgaagggaca-aaaaaggagacgaggataagaatagctagtcaacacaagctggagggagaagagcgaaagagttctcgacaactcaatagaaa 6943429  T
Q  304 ctctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagata 402  Q
    ||||||| ||||   |||||||||||| ||||||| ||| ||||| |||||||||||  ||||||||| ||||||||| |||||||||||||||| ||||    
T  6943430 ctctttgatgtgatttttgaactgagtagagtcctatgtttatattgagattttgtagctgttttagcgaaaattgcgacagtagttactctaatggata 6943529  T
Q  403 agatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaa 462  Q
    ||||       ||||||||  ||||||||||||||||| ||||| ||| ||||| |||||    
T  6943530 agat------ggaacttatctattaatcagttcaacaacacttctggacaagatcaaaaa 6943583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 427
Target Start/End: Complemental strand, 13065548 - 13065125
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||| ||| | ||  |||||||||||||||| |||||||||||          ||||||     
T  13065548 aatattgaaagaatatttatatactgttaaaatcattcttgatttcgacgggacgttattgttccaaaaggcactatgatcttaaaagtcatatttattt 13065449  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||||||||| ||||||||| | ||| ||||| ||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||    
T  13065448 cgaagggacatacattatcgaaggggctatgtttttaagacctttcttaattccgaagggacattatgccgaatagggactaaggtcttaagaacactct 13065349  T
Q  204 tacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || || |||||||||||||||   |||||| |||||||||  ||| ||||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  13065348 tattttcaaagggacagaaaa-aaagatgaggagaagaatggctcatcaacacaagctggagggagaagagataaagatttttcgacaactcaatagaaa 13065250  T
Q  304 ctctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagata 402  Q
    ||||||||||||   |||||||| ||| ||||||| | | |||||||||||||||||| ||| |||||||||| |   ||||||||||||||||| ||||    
T  13065249 ctctttggtgtgttttttgaactaagtggagtcctgtatttatatagagattttgtaactgtattagcaaaaaatttcgcagtagttactctaatggata 13065150  T
Q  403 agatcaaaagtgaacttattcatta 427  Q
    |||||||||| |||||||| |||||    
T  13065149 agatcaaaagggaacttatccatta 13065125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 13 - 445
Target Start/End: Original strand, 16421388 - 16421834
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||| | || |||||| |||||||| ||||||||||||||         |||||||    
T  16421388 aatatcgaaagaatatttatataccgttaagatcattcttaattccgacgggacattattattccaaaaagggactatgatcttaatagtactctttatt 16421487  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    || ||||||| ||  ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||  |||||||  ||| ||||||||||||    
T  16421488 ccaaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgagaagggactatggtcttaagaacactc 16421587  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| || ||||||||||  |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||  ||||||||||||    
T  16421588 ttaattccgaatggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagtttccgacaactcaat 16421687  T
Q  299 agaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     ||||||||||||||||  ||| ||||||| | ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  ||||||||||||    
T  16421688 -gaaactctttggtgtgttttttgaactgattggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaat 16421786  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
     |||||||| ||||  ||  |||| ||||||||| |||||||| ||||    
T  16421787 ggataagattaaaatggagtttatccattaatcaattcaacaacactt 16421834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 38 - 482
Target Start/End: Complemental strand, 37259584 - 37259131
Alignment:
Q  38 gttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgttatcgaagt 127  Q
    ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   |||||||||     
T  37259584 gttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaaatattctttattctgaagggacat---ttatcgaagg 37259488  T
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatgg 227  Q
    ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| |||||||||||||||  ||| ||||||||||||| ||    
T  37259487 gactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaagg 37259388  T
Q  228 agatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaa 323  Q
    |||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| |||    
T  37259387 agatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgttttttgaa 37259289  T
Q  324 ctgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattc 423  Q
    |||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||| | |||||||| ||||  ||  |||| |    
T  37259288 ctgagtggagtcctctatttatatagagattgtgtaactgttttagcaaaaattgcgacaacaattactctagtggataagattaaaatggagtttatcc 37259189  T
Q  424 attaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  37259188 attaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 37259131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 37264292 - 37263831
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  37264292 tatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtattctttattctgaagggacat---tt 37264196  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| || ||| || ||||  ||| |||||||||||||||  ||| ||||||||    
T  37264195 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaactgaaaagcgactatggtcttaagaacactcttaaatccgaagggaca 37264096  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
     |||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||| ||||| ||||||||||||||||     
T  37264095 taaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaattcaat-gaaactctttggtgtgt 37263997  T
Q  317 gttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
     ||| ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| ||||  ||    
T  37263996 tttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaatgga 37263897  T
Q  416 acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
      |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  37263896 gtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 37263831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 38 - 479
Target Start/End: Original strand, 31273890 - 31274339
Alignment:
Q  38 gttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgttatcgaagt 127  Q
    ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   |||||||||     
T  31273890 gttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagg 31273986  T
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatgg 227  Q
    ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| |||||||||||||||  ||| ||||||||||||| ||    
T  31273987 gactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaagg 31274085  T
Q  228 agatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaa 323  Q
    |||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||  |||||||||||| ||||||||||||||||  ||| |||    
T  31274086 agatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagtttccgacaactcaat-gaaactctttggtgtgttttttgaa 31274184  T
Q  324 ctgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattc 423  Q
    |||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| ||||  ||  |||| |    
T  31274185 ctgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaatggagtttatcc 31274284  T
Q  424 attaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
    ||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| ||||    
T  31274285 attaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaa 31274339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 13 - 471
Target Start/End: Original strand, 55252012 - 55252483
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    ||||| |||| ||||||||||||| ||||| |||||||||||||| || | || |||||| |||||||| ||||||||||||||         |||||||    
T  55252012 aatatcgaaagaatatttatataccgttaaaatcattcttaattctgacgggacattattattccaaaaagggactatgatcttaatagtattctttatt 55252111  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    |||||||||| ||  ||||||||  | ||| ||||| |||||| ||| ||||| |||||||| |||| |||||  | |||||  ||| ||||||||||||    
T  55252112 ccgaagggacttatattatcgaatgggctatgtttttaagaccattcctaatttcgaagggacattaaaccgagaatggactatggtcttaagaacactc 55252211  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| |||||||||||||  |||||||| ||||||||  ||||||||||||||| |  ||   ||| ||||||||||||| || ||||||||||||    
T  55252212 ttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggataagagagaaagagctcccgacaactcaat 55252311  T
Q  299 agaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     |||| |||||||||||  ||| ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  55252312 -gaaattctttggtgtgttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacagtagttactctaat 55252410  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaat 471  Q
     ||| |||| ||||  ||  ||||  ||||||||||||||||| ||||  ||||| |||  |||||||||||||    
T  55252411 ggatgagattaaaatggagtttatctattaatcagttcaacaacacttgtggataggat-caaaataaacaaat 55252483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 30 - 482
Target Start/End: Original strand, 51698284 - 51698750
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaa-gggacatacgt 118  Q
    ||||||| ||||||||||||||||||||||  | || ||| || ||||||| |||||||| ||||||         | |||||| ||| ||||||||  |    
T  51698284 tatataccgttaagatcattcttaattccggcgggacattgttattccaaatagggactacgatcttaaaagtactcattattctgaatgggacatatat 51698383  T
Q  119 tatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggac 218  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||   || ||||||||||||||| |||| |||||||    
T  51698384 tatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactattgtcttaagaacactcttaattccgaagggac 51698483  T
Q  219 agaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    ||||||  |||||||| ||||||||  ||||||||||||||| |  ||   |||||||| |||||||||||  ||||||||||| |||||||||||||||    
T  51698484 agaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagatagaaagagttcctgacaactcaat-gaaactctttggtgt 51698582  T
Q  315 gggtt-tgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagt 413  Q
    |  || |||||||||| ||||| ||| | |||||||||||| ||||||||||||||||||||||||| ||  |||||||||||| |||||||| ||||      
T  51698583 gttttatgaactgagtggagtcatctatttatatagagattctgtaattgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatg 51698682  T
Q  414 gaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||  |||| |||||||||||| ||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  51698683 gagtttatccattaatcagtttaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 51698750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 20 - 397
Target Start/End: Complemental strand, 19540920 - 19540530
Alignment:
Q  20 aaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagg 109  Q
    ||||||||||||||||| ||||||| ||||||||| ||| | |    ||| || ||||||| |||||||||||||||         ||||||||||||||    
T  19540920 aaataatatttatataccgttaagaccattcttaaatccaacggagcattgttattccaaatagggactatgatcttaaaagtactctttattccgaagg 19540821  T
Q  110 gacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttc 209  Q
    ||||||  ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||    
T  19540820 gacatatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattc 19540721  T
Q  210 caaagggacagaaaatggagatgatgagaagaataactcgtcaacac-aagctgg--atggagaagagagaaagagttctcgacaactcaatagaaactc 306  Q
    | ||||||||||||| |||||| | ||||||||  |||||||||||| || |  |  | |||||||||||||||||||  |||||||||||| |||||||    
T  19540720 cgaagggacagaaaaaggagattaagagaagaaagactcgtcaacacaaatcaagaaagggagaagagagaaagagttgccgacaactcaat-gaaactc 19540622  T
Q  307 tttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
    ||| || |    |||||||||||| ||||||||| | |||||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||    
T  19540621 tttagtttattttttgaactgagtggagtcctctatttatatagagattttgtaactgttttatcaaaaattgcgacaacagttactctaat 19540530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 474
Target Start/End: Complemental strand, 12823636 - 12823163
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |  | |||||| ||||||||||| ||||||||||         ||||||||    
T  12823636 aatattgaaagaatatttatatactgttaagatcattcttaattccgacggaacattattattccaaaagggtctatgatcttaataatactctttattc 12823537  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    |||| |||| ||  ||||||||  ||||| ||||| |||||| || ||||||| ||||||| |||| || ||| ||||| |  ||| |||||||||||||    
T  12823536 cgaaaggacttatattatcgaatggactatgtttttaagaccatttttaattctgaagggacattaaactgaaaagggattatggtcttaagaacactct 12823437  T
Q  204 tacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagct--ggatgga-gaagagagaaagagttctcgacaactcaata 299  Q
    || |||| |||||||||||||  |||||||  ||||||||  |||||||||||||||    | | ||| ||||||||||||||||  ||||||||||||     
T  12823436 taattccgaagggacagaaaaaaggagatggagagaagaaagactcgtcaacacaagtcaagaaaggaagaagagagaaagagttaccgacaactcaat- 12823338  T
Q  300 gaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaata 398  Q
    |||| |||||||||||  ||| |||||||||  |||  ||| |  ||||||||||| || || ||||||||||||||||||| ||  ||||||||||||     
T  12823337 gaaattctttggtgtgttttttgaactgagtgaagttttctattgatatagagattctgcaactgttttagcaaaaattgcgacaacagttactctaatg 12823238  T
Q  399 gataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    |||||||| ||||  ||  |||| ||||||||| |||||||| ||||  ||||| |||  |||| |||||||||||    
T  12823237 gataagattaaaatggagtttatccattaatcaattcaacaacacttgtggatatgat-caaaagaaacaaatcca 12823163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 38 - 354
Target Start/End: Original strand, 31269401 - 31269726
Alignment:
Q  38 gttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgttatcgaagt 127  Q
    ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   |||||||||     
T  31269401 gttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattctgaagggacat---ttatcgaagg 31269497  T
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatgg 227  Q
    ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| |||||||||||||||  ||| ||||||||||||| ||    
T  31269498 gactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggacagaaaaagg 31269596  T
Q  228 agatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaa 323  Q
    |||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||||||| |||||||||||| ||||||||||||||||   ||||||    
T  31269597 agatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgttttttgaa 31269695  T
Q  324 ctgagttgagtcctctgtatatatagagatt 354  Q
    |||||| ||||||||| | ||||||||||||    
T  31269696 ctgagtggagtcctctatttatatagagatt 31269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 140 - 482
Target Start/End: Complemental strand, 33468615 - 33468269
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtatt-aagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| ||||||||||  |||||| |||| |||||| |||||||  ||| || ||||||||||||| |||| |||| || ||||| |||||||| ||||    
T  33468615 aagaccattcttaattctaaagggacattaaaccgaaaagggactatggtctttaagaacactcttaattccgaaggaacggaaaaaggagatgaagaga 33468516  T
Q  239 agaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggt--gtgggtttgaactgagttgag 333  Q
    ||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||||||||||||  ||   |||||||||||| |||    
T  33468515 agaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgcgtttttttgaactgagtggag 33468417  T
Q  334 tcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcag 432  Q
    |||||| | |||||| ||||| ||||| |||||||||||||||| || | | |||||||||||| ||||||| | ||| ||||  |||| |||||| |||    
T  33468416 tcctctatttatataaagattctgtaactgttttagcaaaaattacgactgcagttactctaatggataaga-ctaaaatgaagtttatccattaaccag 33468318  T
Q  433 ttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  33468317 ttcaacaacacttgtggatatgat-caaaagaaacaaatccacaaaagtg 33468269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 147 - 481
Target Start/End: Complemental strand, 33462968 - 33462626
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataac 246  Q
    |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| |||| ||||||||  ||||| | ||||||||  ||    
T  33462968 ttcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggaacagaaaaatgagataaagagaagaaagac 33462869  T
Q  247 tcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg--ggtttgaact-----gagttgagtcc 336  Q
    ||||||||||||| |  |  | ||||||||||||||||||||||||||||||||| ||||||||||||||||    ||||||||     |||| ||||||    
T  33462868 tcgtcaacacaagtcaagaaagggagaagagagaaagagttctcgacaactcaat-gaaactctttggtgtgtttttttgaactgagtggagtggagtcc 33462770  T
Q  337 tctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttc 435  Q
    | | | |||||| ||||| | ||||||||||||||||||||||| ||  | |||||||||| ||||||| | ||| ||||  |||| |||||||||||||    
T  33462769 tttatttatataaagattctataattgttttagcaaaaattgcgacaacaattactctaatggataaga-ctaaaatgaagtttatccattaatcagttc 33462671  T
Q  436 aacaatacttcaggataagataaaaaataaacaaatccataaaagt 481  Q
    ||||| ||||  ||||| |||  |||| ||||||||||| ||||||    
T  33462670 aacaacacttgtggataggat-caaaagaaacaaatccacaaaagt 33462626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 171 - 482
Target Start/End: Original strand, 13059976 - 13060290
Alignment:
Q  171 accgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--gg 267  Q
    |||||| |||||||  ||| |||||| |||||||| |||| ||||||||||||| ||||| || ||||||||  | ||||||||||||| |  ||   ||    
T  13059976 accgaaaagggactatggtcttaagatcactcttaattccgaagggacagaaaaaggagaagaagagaagaaagagtcgtcaacacaagtcaagaaaggg 13060075  T
Q  268 agaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt--gaactgagttgagtcctctgtatatatagagattttgtaattgtt 365  Q
    |||||||||||||||||| |||||| | ||| ||||||||||  ||||| |||  ||||| ||| ||||||||| | |||||||||||||||||| ||||    
T  13060076 agaagagagaaagagttcccgacaattaaat-gaaactcttttttgtggttttttgaactcagtggagtcctctatttatatagagattttgtaactgtt 13060174  T
Q  366 ttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataa 465  Q
    ||||||||||||||| ||  ||| ||||| ||||||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||    
T  13060175 ttagcaaaaattgcgacaaaagtcactctgatagataagattaaaatagagtttatccattaatcagttcaacaacacttgtggataggat-gaaaagaa 13060273  T
Q  466 acaaatccataaaagtg 482  Q
    ||||||| | |||||||    
T  13060274 acaaatcaacaaaagtg 13060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 302
Target Start/End: Complemental strand, 15805293 - 15805088
Alignment:
Q  97 tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaaga 196  Q
    |||||||||||||| ||||  ||||| ||| ||||| | | | ||||   |||||||||||||||||| |||||||||||||| ||   |||| ||||||    
T  15805293 tttattccgaaggggcataaattatcaaagggactatgctattaagattattcttaattccgaagggacattataccgaatagagataaaggtcttaaga 15805194  T
Q  197 acactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactca 296  Q
    ||| || || |||  |||||| |||||| | |||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  15805193 acagtcataattctgaagggatagaaaaagtagatgaggagaagaatatctcgttaacacaagctggaaggagaagagagaaagagttctcgacaactca 15805094  T
Q  297 atagaa 302  Q
    | ||||    
T  15805093 agagaa 15805088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 13 - 462
Target Start/End: Original strand, 23093465 - 23093914
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaaggga-ctatgatctt-------ctttattcc 104  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||| | | |||| ||||||  ||||||| ||| |||| |||||       |||||||      
T  23093465 aatattgaaagaatatttatatactggtaaaatcattcttaatttcaacgagacattattactccaaaaaggaactataatcttaaatactctttatttt 23093564  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    ||||||| ||   ||||| ||  ||||| ||| | |||||||||||||||| |||| ||| ||||||| ||||||||||| |||| ||||||| ||||||    
T  23093565 gaagggaaatgaattatcaaatggactatgttcttaagacctttcttaatttcgaatggacattatacggaatagggactaaggtcttaagaaaactctt 23093664  T
Q  205 acttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
    | || | |||||||| |||   ||||||| |||||||||| ||||||||||||  |||||  ||||||||||||||| |||||||||         ||||    
T  23093665 aatttcgaagggacaaaaataagagatgaagagaagaatagctcgtcaacacagactggagagagaagagagaaagaattctcgaca---------aaac 23093755  T
Q  305 tctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataa 403  Q
    |||||| ||||   |||||||||||| ||||||||| | ||| ||||| ||||||||  | ||||   ||||||||||||  | |||| ||| | |||||    
T  23093756 tctttgatgtgttttttgaactgagtggagtcctctatttatttagaggttttgtaaccggtttaattaaaattgcggcaacaattacactagtggataa 23093855  T
Q  404 gatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaa 462  Q
    |||||||||  |||||| | | ||||  |||||||||  |||  ||||||||| |||||    
T  23093856 gatcaaaaggaaacttaataactaatttgttcaacaaatcttgtggataagatgaaaaa 23093914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 5271150 - 5270950
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  5271150 tatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 5271054  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  5271053 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttccgaagggaca 5270954  T
Q  220 gaaa 223  Q
    ||||    
T  5270953 gaaa 5270950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 482
Target Start/End: Original strand, 19906731 - 19907069
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataac 246  Q
    |||||||||||||||| | |||| ||| || |||||||  | | ||||||||||| ||| || | ||||||||||||| | |||| | ||||||||  ||    
T  19906731 ttcttaattccgaaggaacattaaaccaaaaagggactatgatcttaagaacactattaatttcgaagggacagaaaaagaagataaagagaagaaagac 19906830  T
Q  247 tcgtcaacacaagct--ggatgga-gaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttg--aactgagttgagtcctctgt 341  Q
    |||||||||||||    | | ||| ||||||||||||||||| | ||||||||||  |||||||||| | |   |||   |||||||| ||||||||| |    
T  19906831 tcgtcaacacaagtcaagaaaggaagaagagagaaagagttcccaacaactcaatt-aaactctttgatatatttttttaaactgagtggagtcctctat 19906929  T
Q  342 atatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaat 441  Q
     |||||||||||||||||||||||||||||| ||||||| ||  ||| |||||||| |||||||| |||   ||  |||| ||||||||||||||||||     
T  19906930 ttatatagagattttgtaattgttttagcaacaattgcgacaacagtcactctaatggataagatgaaattggagtttatccattaatcagttcaacaac 19907029  T
Q  442 acttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||  ||||| |||  |||| ||||||||||| |||||||    
T  19907030 acttgtggataggat-caaaagaaacaaatccacaaaagtg 19907069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 32081867 - 32081653
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    ||||||| || ||||||||||||||||||||||     |||||||||| | || |||||| ||||||||||||||||||||||         ||||||||    
T  32081867 aatattggaagaatatttatatactgttaagat-----ttaattccgacgggacattattattccaaaagggactatgatcttaatagtactctttattc 32081773  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||||| ||  ||||||||| ||||| ||||| |||||| ||||||||||| |||||| |||| |||||| |||||||  ||| |||||||||||||    
T  32081772 cgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaaccgaaaagggactatggt-ttaagaacactct 32081674  T
Q  204 tacttccaaagggacagaaaa 224  Q
    || || | |||||||||||||    
T  32081673 taatttcgaagggacagaaaa 32081653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 19106976 - 19107272
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||| |||||||||| | || ||| || ||||||| |||| ||||||||||         ||||||||||||| ||||||  ||    
T  19106976 tatataccgttaagatcatttttaattccgacgggacattgttattccaaataggggctatgatcttaaaagtactctttattccgaagagacatatatt 19107075  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| ||| |||  ||| ||||||| |||||||  ||| ||||||||    
T  19107076 atcgaagggactatgtttt-aagaccattcttaatttcgaagggacattaaaccgaaaaggaactatggtcttaagaatactcttaagtccgaagggaca 19107174  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    || || |||||| | ||||||||  ||||||||||||||| |  |  |  ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  19107175 gagaaaggagataaagagaagaaagactcgtcaacacaagtcaagaaagagagaagagagaaagagtttccgacaactcaat-gaaactctttggtgtg 19107272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 445
Target Start/End: Complemental strand, 32221049 - 32220870
Alignment:
Q  266 ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgt 364  Q
    |||||||||||||||||||  |||||||||||| |||||| ||||||||    |||||||||||| ||||||||| | |||||||||||| ||||| |||    
T  32221049 ggagaagagagaaagagtttccgacaactcaat-gaaactttttggtgtattttttgaactgagtggagtcctctatttatatagagattatgtaactgt 32220951  T
Q  365 tttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
    ||||||| |||||||| ||  |||||||||||| |||||||| |||| ||||  |||||||||||||| |||||||| ||||    
T  32220950 tttagcataaattgcgacaacagttactctaatggataagattaaaa-tgaagtttattcattaatcatttcaacaacactt 32220870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 5270854 - 5270691
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  5270854 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 5270755  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  |||||||||  |||| ||||||||||| |||||||    
T  5270754 ttatccattaatcagttcaacaacacttgtggataagat-caaaagaaacaaatccacaaaagtg 5270691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 312
Target Start/End: Original strand, 19102420 - 19102639
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacc-tttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    |||||||| |||| |||||||  ||||||||| ||||| ||||| |||||| ||||||||||||||| ||| |||| |||||| |||||||   || |||    
T  19102420 tctttatttcgaatggacatatattatcgaagggactatgtttt-aagaccatttcttaattccgaatggacattaaaccgaaaagggactatagtctta 19102518  T
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgac 290  Q
    |||  |||||||||||  || |||||||||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||| ||||| ||||    
T  19102519 agattactcttacttctgaaaggacagaaaagggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaaaagttcccgac 19102618  T
Q  291 aactcaatagaaactctttggt 312  Q
    |||||||| |||||||||||||    
T  19102619 aactcaat-gaaactctttggt 19102639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 31729118 - 31728918
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    ||||||||| ||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||          ||||||| ||||||||||   ||    
T  31729118 tatatactgataagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactttttattctgaagggacat---tt 31729022  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  31729021 atcgaagggactatgtttttaagaccattcttaattcagaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttccgaagggaca 31728922  T
Q  220 gaaa 223  Q
    ||||    
T  31728921 gaaa 31728918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 319 - 482
Target Start/End: Original strand, 31766538 - 31766700
Alignment:
Q  319 ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaact 418  Q
    ||||||| ||| || |||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||| |    
T  31766538 ttgaactaagtggactcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggaatt 31766637  T
Q  419 tattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  31766638 tatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 31766700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 39216713 - 39216594
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||  ||   ||||||||||||| |||||||| |||||    
T  39216713 aagacctttcttaatttcgaagggacattataccgaatagggactatggtcttaagaacactcttgattttgaagggacagaaaaaggagatgaggagaa 39216614  T
Q  240 gaataactcgtcaacacaag 259  Q
    ||||| ||||| ||||||||    
T  39216613 gaatagctcgttaacacaag 39216594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 5927946 - 5927743
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||| ||| | || ||| || ||||||| |||||||||||||||         |||||||  |||||||||||  ||    
T  5927946 tatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattttgaagggacatatatt 5927847  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||| ||| |||| || |||||    
T  5927846 atcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacacttttaattccgaatggaca 5927748  T
Q  220 gaaaa 224  Q
    |||||    
T  5927747 gaaaa 5927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 8694378 - 8694541
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||||||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  8694378 tttgaactaagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 8694477  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||| ||||| ||||  ||||| |||  |||| |||||||| || |||||||    
T  8694478 ttatccattaatcagtttaacaacacttgtggataggat-caaaagaaacaaattcacaaaagtg 8694541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 312
Target Start/End: Complemental strand, 42316240 - 42316066
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatg----gagatgatg 235  Q
    |||||| ||||||||| |||||||| ||||||||||||||| ||| |||| | || |||||||||| |||  |||||||||||||      ||||||| |    
T  42316240 aagaccattcttaatttcgaagggacattataccgaataggaactaaggtctcaataacactcttaattctgaagggacagaaaaaaaaatgagatgagg 42316141  T
Q  236 agaagaataactcgtcaacacaa-gctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggt 312  Q
    ||||||||| ||||| ||||||| ||| || |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  42316140 agaagaatagctcgttaacacaaagcttgagggagaagagaaaaag--ttctcgacaactcaata-aaactctttggt 42316066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 31766238 - 31766440
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||          ||||||| |||||||||||  ||    
T  31766238 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactttttattctgaagggacatatatt 31766337  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    |||| || ||||| ||||| |||||| |||||||||||||||||| |||| || ||| |||||||  ||| ||||||| ||||||| |||| || |||||    
T  31766338 atcgcagggactatgtttt-aagaccattcttaattccgaagggacattaaactgaaaagggactatggtcttaagaatactcttaattccgaaaggaca 31766436  T
Q  220 gaaa 223  Q
    ||||    
T  31766437 gaaa 31766440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 40408568 - 40408647
Alignment:
Q  16 attgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt 95  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  40408568 attgaaagaatatttatatactgttaaaatcattcttaattccgatgagacattattgttctcaaaggaactatgatctt 40408647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 5927648 - 5927485
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa- 416  Q
    |||||||| ||| ||||||||| | ||||| |||||| |||||||||||||||||| |||| | ||  |||||||||||| |||||||| |||| ||||     
T  5927648 tttgaactaagtggagtcctctatttatatggagattctgtaattgttttagcaaatattgtgacaacagttactctaatggataagattaaaa-tgaag 5927550  T
Q  417 cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  5927549 tttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 5927485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 308
Target Start/End: Complemental strand, 42758452 - 42758297
Alignment:
Q  157 cgaagggatattataccgaatag-ggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaac 254  Q
    |||||||| ||||||||||| |  |||||  ||| ||||||||||||||| |||| |||||||||||||  |||||||| |||||||| |||||||||||    
T  42758452 cgaagggacattataccgaaaaatggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaaaactcgtcaac 42758353  T
Q  255 acaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctt 308  Q
    ||||| |  |  | |||| ||||||||||||||||||||||||||||| ||||||||    
T  42758352 acaagtcaagaaagggagcagagagaaagagttctcgacaactcaata-aaactctt 42758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 26188246 - 26188138
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgac 290  Q
    |||||| |||||| |  |||||||||||| |||  ||||||||  |||| |||| | ||| ||||||||||||| |||||||||||||||||||||||||    
T  26188246 ttaagagcactctcaaatccaaagggacataaagaggagatgagaagaaaaatagcacgttaacacaagctggagggagaagagagaaagagttctcgac 26188147  T
Q  291 aactcaata 299  Q
    |||||||||    
T  26188146 aactcaata 26188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 147 - 310
Target Start/End: Original strand, 47244634 - 47244799
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataac 246  Q
    |||||||||||||||||| |||| |||||| ||| |||   || ||||||||||||||| || | |||||||||||||  ||||||| | | ||||| ||    
T  47244634 ttcttaattccgaagggacattaaaccgaaaaggaactatagtcttaagaacactcttaatttcgaagggacagaaaaatgagatgaagtggagaatgac 47244733  T
Q  247 tcgtcaacacaag---ctggatggagaagagagaaagagttctcgacaactcaatagaaactctttg 310  Q
    |||||||||||||    |  | |||||||||||||||||||| |||||||| ||| |||||||||||    
T  47244734 tcgtcaacacaagtcaataaagggagaagagagaaagagttcccgacaactaaat-gaaactctttg 47244799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 312
Target Start/End: Complemental strand, 8029947 - 8029779
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacag-aaaatggagatgatgagaagaataa 245  Q
    |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| || | ||||||| | ||||  ||||||| ||||||||  |    
T  8029947 ttcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaatttcgaagggacggaaaaaaagagatgaagagaagaaaga 8029848  T
Q  246 ctcgtcaacacaa---gctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggt 312  Q
    | |||||||||||      | | |||||||||||||||||||| |||||||||||| |||||||||||||    
T  8029847 cacgtcaacacaaatcaaggaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggt 8029779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 8694080 - 8694282
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || |||  | ||||||| |||||||||||||||         ||||||||  ||||||||||  ||    
T  8694080 tatataccgttaagatcattcttaattccgacgggacattgctattccaaatagggactatgatcttaaaagtactctttattctaaagggacatatatt 8694179  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||  ||||| ||||| |||||| ||||||||||| |||||| |||| | | || |||||||  ||| ||||||||||||||| |||| ||||||||    
T  8694180 atcgaatggactatgtttt-aagaccattcttaattccaaagggacattaaatcaaaaagggactatggtcttaagaacactcttaattccgaagggaca 8694278  T
Q  220 gaaa 223  Q
    ||||    
T  8694279 gaaa 8694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 482
Target Start/End: Complemental strand, 31728794 - 31728633
Alignment:
Q  320 tgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactt 419  Q
    |||||| ||| ||||||||| | |||||||||||| ||||| |||||| |||||||||||| ||  |||||||||||| |||||||| ||||  ||  |     
T  31728794 tgaactaagtggagtcctctatttatatagagattctgtaactgttttggcaaaaattgcgacaacagttactctaatggataagattaaaatggagtta 31728695  T
Q  420 attcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    || ||||||||||||||| || ||||  ||||| |||  |||| ||||||||||| |||||||    
T  31728694 atccattaatcagttcaataacacttgtggatatgat-caaaagaaacaaatccacaaaagtg 31728633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 13059758 - 13059971
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatct---------tctttatt 102  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| | || ||| || ||| ||| ||||||||||||||         ||||||||    
T  13059758 aatattgaaataatttttatataccgttaagatcattcttaattccgacgggacattgttattctaaatagggactatgatcttaaaagtactctttatt 13059857  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
     | ||||||||||  |||| |||  || || ||||| |||||| ||||||||||| ||||| | ||| |||||| |||||||  ||| |||||||||||     
T  13059858 tcaaagggacata--ttattgaatggattatgtttttaagaccattcttaattcccaaggggtgttaaaccgaaaagggactatggtcttaagaacactt 13059955  T
Q  203 ttacttccaaagggac 218  Q
    ||| |||  |||||||    
T  13059956 ttaattctgaagggac 13059971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 226 - 381
Target Start/End: Complemental strand, 30054586 - 30054431
Alignment:
Q  226 ggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttg-aac 324  Q
    |||||||| |||||||||| ||||| ||||||| ||| | ||||||||||||||| |||||| |||||| ||||| |||||||| |||||  |||| |||    
T  30054586 ggagatgaagagaagaatagctcgttaacacaaactgaagggagaagagagaaagtgttctcaacaacttaatag-aactctttagtgtgattttgaaac 30054488  T
Q  325 tgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcgg 381  Q
    | ||| ||||||||| | |||||| || | |||||| || |||| | ||||||||||    
T  30054487 taagtagagtcctctatttatataaaggtcttgtaactggtttaactaaaattgcgg 30054431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 43477640 - 43477472
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| || |||||||  || ||| |||||||||||||  |||| |||| |||||||||| |||| |||| || |||||||||| | ||||||  ||||    
T  43477640 aagaccctttttaattctaaaaggacattataccgaataatgactaaggttttaagaacacccttaattccgaaaggacagaaaaagaagatgagaagaa 43477541  T
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
     |||| ||||| ||||||||      || ||||||||||||||| || ||||||||||||| ||||||||||||||    
T  43477540 taatagctcgttaacacaag------ggggaagagagaaagagtacttgacaactcaatag-aactctttggtgtg 43477472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 445
Target Start/End: Complemental strand, 32081630 - 32081472
Alignment:
Q  285 ctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggca 383  Q
    |||| ||||||||| |||||| |||||||||  ||| ||||||||| ||||| |||  || |||||||||| ||||| |||||||||| |||||||| ||    
T  32081630 ctcgtcaactcaat-gaaactttttggtgtgttttttgaactgagtggagtcttct--atttatagagattctgtaactgttttagcataaattgcgaca 32081534  T
Q  384 gtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
      |||||||||||| |||||||| |||| ||||  |||| |||||||||||||||||| ||||    
T  32081533 acagttactctaatcgataagattaaaa-tgaagtttatccattaatcagttcaacaacactt 32081472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 119 - 314
Target Start/End: Complemental strand, 48276291 - 48276093
Alignment:
Q  119 tatcgaagtgactacgttttgaagacctttcttaattccgaagggatat-tataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    |||||||| ||||| |  || |||||| ||||||||||| |||||| || || |||||| |||||||   || ||||||||||||||| |||| ||||||    
T  48276291 tatcgaagggactatgaatttaagaccattcttaattccaaagggacatctaaaccgaaaagggactatagtcttaagaacactcttaattccgaaggga 48276192  T
Q  218 cagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtg 313  Q
    | |||||  |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||| ||| |||||||||||| |||||||||| |||    
T  48276191 cggaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaaga-ttcccgacaactcaat-gaaactctttagtg 48276094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 2820407 - 2820501
Alignment:
Q  255 acaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatataga 350  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||   |||||||||||| ||||| ||| | ||||||||    
T  2820407 acaagttggatggagaagagaaaaagagttctcgacgactcaatag-aactatttggtgttattttgaactgagtggagtcatctatttatataga 2820501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 483
Target Start/End: Original strand, 16948608 - 16948824
Alignment:
Q  266 ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgtt 365  Q
    |||||||||||||||| ||||||| |||| |||||||  | |||| |||   || ||||||||| ||||| |||   || |||||||||||||||  | |    
T  16948608 ggagaagagagaaagatttctcgataactgaatagaatatttttgatgtatatt-gaactgagtggagtcgtctaattacatagagattttgtaacaggt 16948706  T
Q  366 ttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataa 465  Q
     |||  ||||||| ||||||||||| ||||   ||||||||||||||  ||||||  |  || |||||| ||||||| ||  | ||||||||||| | ||    
T  16948707 atagttaaaattgtggcagtagttattctagcggataagatcaaaagacaacttaacccctattcagtttaacaatagttgtgaataagataaaatagaa 16948806  T
Q  466 acaaatccataaaagtga 483  Q
    ||||||||| ||||||||    
T  16948807 acaaatccacaaaagtga 16948824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 55150090 - 55150191
Alignment:
Q  158 gaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacaca 257  Q
    ||||||| |||||||| || |||||||  | ||||||||||||||||| || | |||||||| |||| |||||||| |||||||  ||||| ||||||||    
T  55150090 gaagggacattataccaaaaagggactatgatattaagaacactcttaatttcgaagggacaaaaaaaggagatgaagagaagataaactcatcaacaca 55150189  T
Q  258 ag 259  Q
    ||    
T  55150190 ag 55150191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 12875024 - 12875078
Alignment:
Q  260 ctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  12875024 ctggatggagaagagagaaagggttctcgacaactcaatag-aactcttcggtgtg 12875078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 39216583 - 39216521
Alignment:
Q  252 aacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||||    
T  39216583 aacacaagctggagggagaagagagaaagagttctagaaacctcaatag-aactctttggtgtg 39216521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 482
Target Start/End: Complemental strand, 39216490 - 39216371
Alignment:
Q  362 tgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaa 461  Q
    ||||||| | ||||||||| || |||||| |||||| ||||||||||| ||  ||||||  || |||| ||||||| || ||||  | ||||||||||||    
T  39216490 tgttttaactaaaattgcgacaatagttaatctaatggataagatcaataggaaacttaaccactaattagttcaagaacacttgtg-ataagataaaaa 39216392  T
Q  462 ataaacaaatccataaaagtg 482  Q
    | ||||||||||| |||||||    
T  39216391 agaaacaaatccacaaaagtg 39216371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 29985253 - 29985190
Alignment:
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    ||||||||||||  || ||||||| | ||| ||||||||||||||||||| ||| |||||||||    
T  29985253 agaataactcgttcacgcaagctgaagggaaaagagagaaagagttctcgtcaattcaatagaa 29985190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 41817243 - 41817326
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||| |||||| || |||| ||||| || |||||| | |||||  ||| ||||||||||||||| |||| ||||||||||||    
T  41817243 aagaccattcttattttcgaaaggataataaaccgaagatggactatggtcttaagaacactcttaattccgaagggacagaaa 41817326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 5e-97; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 13 - 482
Target Start/End: Original strand, 26779466 - 26779955
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||          ||||||     
T  26779466 aatattgaaagaatatttataaacttttaagatcattcttaattccgacgagacattatttttccaaaagggactatgatcttaaaagtactttttattt 26779565  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||||||||| || |||||| ||||| ||||| || || ||||||||||||||||||| ||||||  ||||||||||| |||| |||||||||||||    
T  26779566 cgaagggacatacattgtcgaagagactatgtttttaaaacatttcttaattccgaagggacattatagtgaatagggactaaggtcttaagaacactct 26779665  T
Q  204 tacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || ||| |||||| |||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  26779666 tatttctaaaggggcagaaaaatgagatgaggagaagaataactcgtcaacacaagccggatggagaagagagaaagagttatcgacaactcaatggaaa 26779765  T
Q  304 ctc--------tttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagc---aaaaattgcggcagtagttac 391  Q
    |||        |||  ||||   |||||| ||||| |||||| |||| |||||||||||||||||| | |||||||   |||||||||||||  | ||||    
T  26779766 ctcgtttttttttttttgtgatttttgaattgagtggagtcc-ctgtttatatagagattttgtaactattttagcaaaaaaaattgcggcaacaattac 26779864  T
Q  392 tctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatac--ttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||| |||||||||||||   |||||||| |||||||||||||||||| ||  ||  ||||||||||||||| ||||| ||||| |||||||    
T  26779865 tctaacagataagatcaaa--ggaacttatccattaatcagttcaacaacactattgtggataagataaaaaagaaacagatccacaaaagtg 26779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 15 - 437
Target Start/End: Complemental strand, 23548360 - 23547927
Alignment:
Q  15 tattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattccg 105  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||         ||||||| ||    
T  23548360 tattgaaagaatatttataaactgttaagatcattcttaattccgacaagacattattgttccaaaagggactataatcttaaaagtattctttattacg 23548261  T
Q  106 aagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctta 205  Q
    ||| ||||||| ||||||||   |||| ||||| |||| ||||||||| ||| ||| || |||||||||||||  |||  |||| |||||||||||||||    
T  23548260 aagcgacatacattatcgaatgtactatgtttttaagatctttcttaactccaaagagacattataccgaataacgacaaaggtcttaagaacactctta 23548161  T
Q  206 cttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
     || | |||||| ||||||  |||||||| |||||||||| |||||||||||||| ||||  ||||||| |||||||||||||||| |||||||||||||    
T  23548160 ttttcgaagggatagaaaaaaggagatgaagagaagaatagctcgtcaacacaagttggagagagaagatagaaagagttctcgaccactcaatagaaac 23548061  T
Q  305 tctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataa 403  Q
    |||||||||||   ||||||||  || ||||||||| | |||||||||||| ||||| |||||||||||||||||  |||  ||||| | ||||  ||||    
T  23548060 tctttggtgtgatttttgaactaggtggagtcctctatttatatagagattgtgtaactgttttagcaaaaattgaagcaacagttaatttaatgaataa 23547961  T
Q  404 gatcaaaagtgaacttattcattaatcagttcaa 437  Q
    ||||||||| |||||||| |||||| || |||||    
T  23547960 gatcaaaagagaacttatacattaaacaattcaa 23547927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 474
Target Start/End: Complemental strand, 18876132 - 18875664
Alignment:
Q  16 attgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattccga 106  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||| | || |||||| ||||||||||||||||||||||         |||||||||||    
T  18876132 attgaaagaatatttatatagcgttaagatcattcttaattccgacgggacattattattccaaaagggactatgatcttaatattactctttattccga 18876033  T
Q  107 agggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttac 206  Q
    |||||| ||  |||||| |||||||| ||||| |||||| ||||||||| |||||||| |||| |||||| ||||||   ||| |||||||||||||||     
T  18876032 agggacttatattatcggagtgactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaagggacaatggtcttaagaacactcttaa 18875933  T
Q  207 ttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagct--ggatg-gagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || | ||||||||||||| |||||||| ||||||||  | ||||||||||||| |  | | | ||||||||||||||||||| |||||||||||| ||||    
T  18875932 tttcgaagggacagaaaaaggagatgaagagaagaaagattcgtcaacacaagttaagaaagagagaagagagaaagagttcccgacaactcaat-gaaa 18875834  T
Q  304 ctctttggtgtgggt-ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagata 402  Q
    |||| |||||||  | ||||||||||| ||||||||| | |||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||  |||    
T  18875833 ctctatggtgtgtttattgaactgagtggagtcctctatttatatagagattctgtaactgtttta-caaaaattgcgacattagttactctaatgaata 18875735  T
Q  403 agatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    | || ||||  ||  ||||  ||||||||||||||||| ||||  ||||| |||  |||| |||||||||||    
T  18875734 aaattaaaatggagtttatctattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatcca 18875664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 30 - 461
Target Start/End: Complemental strand, 15951282 - 15950840
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| |  | ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  15951282 tatataccgttaagatcattcttaattccgacggaacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 15951183  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||| ||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  15951182 atcaaagggactatgttttaaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggaca 15951083  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    ||||| ||||| || || |||||   |||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||| |||||||||||     
T  15951082 gaaaa-ggagaagaagaaaagaaaggctcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaattctttggtgtgt 15950985  T
Q  317 gtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa 416  Q
     |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||| | ||||||||||  ||||||| ||||  ||     
T  15950984 ttttgaactaagtggagtcctctttttatatagagattctgtaactgttttagcaaaaattgcgacagcaattactctaatgaataagattaaaatggag 15950885  T
Q  417 cttattcattaatcagttcaacaatacttcaggataagataaaaa 461  Q
     |||| |||||||||||||||||| ||||  ||||||||| ||||    
T  15950884 tttatccattaatcagttcaacaacacttgtggataagatcaaaa 15950840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 13 - 481
Target Start/End: Complemental strand, 1910703 - 1910221
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||| | || |||||| ||| |||| ||||||||||||||         |||||||    
T  1910703 aatattgaaagaatatttatataccgttaaggtcattcttaattccgacgggacattattattcaaaaaagggactatgatcttaatagtactctttatt 1910604  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
     ||||||||| ||  ||||||||  ||||| ||||| |||||| |||||||||  ||||||| |||| |||||| |||||||  ||| ||||||||||||    
T  1910603 tcgaagggacttatattatcgaatggactatgtttttaagaccattcttaattatgaagggacattaaaccgaaaagggactatggtcttaagaacactc 1910504  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagct--ggatgga-gaagagagaaagagttctcgacaactcaat 298  Q
    ||| ||||||||||||||||||  |||||||| ||||||||  |||||||||||||||    | | ||| ||||||||||||||||| ||||||||||||    
T  1910503 ttaattccaaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaaggaagaagagagaaagagttcccgacaactcaat 1910404  T
Q  299 agaaactctttggtgtgggtttg--aactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaa 396  Q
     ||||||||||||||||  |||   |||||||  |||| |||| | |||||||||||| ||||| ||||||||||||||||||| ||  ||||||| |||    
T  1910403 -gaaactctttggtgtgttttttttaactgagcggagtactctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactataa 1910305  T
Q  397 tagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagt 481  Q
    | |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| ||||||    
T  1910304 tggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggatatgat-caaaagaaacaaatccacaaaagt 1910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 380
Target Start/End: Complemental strand, 38181991 - 38181610
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaag-ggactatgatctt---------ctttatt 102  Q
    |||| ||||| ||||||||||||| |||||||||||| |||||||||| | || |||||| ||||||||  |||||||||||||         |||||||    
T  38181991 aataatgaaagaatatttatataccgttaagatcatttttaattccgacgggacattattattccaaaaaaggactatgatcttaatggtactctttatt 38181892  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    |||||||||| ||  ||||||||| ||||| ||||| |||||| || ||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||    
T  38181891 ccgaagggacttatattatcgaagagactatgtttttaagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactc 38181792  T
Q  203 ttacttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| ||||||||| |||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||||||| ||||||||||||    
T  38181791 ttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat 38181692  T
Q  299 agaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcg 380  Q
     ||||||||||||||||   ||| |||||||| ||||||||| | ||||||||||||||||||  ||||||||||||||||||    
T  38181691 -gaaactctttggtgtgttttttaaactgagtggagtcctctatttatatagagattttgtaaccgttttagcaaaaattgcg 38181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 123 - 384
Target Start/End: Original strand, 2966099 - 2966359
Alignment:
Q  123 gaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaa 222  Q
    |||| ||||| ||||| |||||| |||||||||| |||| ||  |||||||||| ||||||| |||| ||||||||||||||| |||| | |||||| ||    
T  2966099 gaagggactatgtttttaagaccgttcttaattctgaagagacgttataccgaacagggactaaggtcttaagaacactcttatttcctatgggacaaaa 2966198  T
Q  223 aatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttg 321  Q
    || | |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||   ||||    
T  2966199 aaagaagatgaagagaagaataactcgtcaacacaagctggagggagaagagagaaagaattctcgacaatttaatagaaactctttggtgtgatttttg 2966298  T
Q  322 aactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcag 384  Q
    ||||||||  |||| ||  | |||||||||||||||||| || ||||||||||||||||||||    
T  2966299 aactgagt--agtcttcaatttatatagagattttgtaactgctttagcaaaaattgcggcag 2966359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 479
Target Start/End: Original strand, 17020698 - 17021177
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||| |  |  | |||||| |||||||| ||||| ||||||||         |||||||    
T  17020698 aatatcgaaagaatatttatataccgttaagatcattcttaattctggcggaacattattattccaaaaagggacaatgatcttaatagtactctttatt 17020797  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
      |||||| | ||  ||||||||| ||||| ||||| |||||| ||||||||||| |||||| |||| |||||  | |||||  ||| ||||||||||||    
T  17020798 ttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaaccgagaaaggactatggtcttaagaacactc 17020897  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggat---ggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| |||||||||||||  |||||||| ||||||||  | |||||||||||||    |    |||||||||||||||||||  |||||||| |||    
T  17020898 ttaattccgaagggacagaaaaaaggagatgaagagaagaaagaatcgtcaacacaagtcaaaaaagggagaagagagaaagagtttccgacaacttaat 17020997  T
Q  299 agaaactctttggtgtgggt-ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     ||||||||||||||||  | ||||||||||| ||||||||| | |||| ||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  17020998 -gaaactctttggtgtgtttcttgaactgagtggagtcctctatttatacagagattttgtaactgttttagcaaaaattgcgacaatagttactctaat 17021096  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
     |||||||| ||||  ||  |||| ||||||||| |||||||| ||||  ||||| |||  |||| ||||||||||||||||    
T  17021097 ggataagattaaaatagagtttatccattaatcaattcaacaacacttgtggataggat-caaaagaaacaaatccataaaa 17021177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 479
Target Start/End: Original strand, 17551135 - 17551614
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||| |  |  | |||||| |||||||| ||||| ||||||||         |||||||    
T  17551135 aatatcgaaagaatatttatataccgttaagatcattcttaattctggcggaacattattattccaaaaagggacaatgatcttaatagtactctttatt 17551234  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
      |||||| | ||  ||||||||| ||||| ||||| |||||| ||||||||||| |||||| |||| |||||  | |||||  ||| ||||||||||||    
T  17551235 ttgaaggggcttatattatcgaagggactatgtttttaagaccattcttaattccaaagggacattaaaccgagaaaggactatggtcttaagaacactc 17551334  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggat---ggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| |||||||||||||  |||||||| ||||||||  | |||||||||||||    |    |||||||||||||||||||  |||||||| |||    
T  17551335 ttaattccgaagggacagaaaaaaggagatgaagagaagaaagaatcgtcaacacaagtcaaaaaagggagaagagagaaagagtttccgacaacttaat 17551434  T
Q  299 agaaactctttggtgtgggt-ttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     ||||||||||||||||  | ||||||||||| ||||||||| | |||| ||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  17551435 -gaaactctttggtgtgtttcttgaactgagtggagtcctctatttatacagagattttgtaactgttttagcaaaaattgcgacaatagttactctaat 17551533  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
     |||||||| ||||  ||  |||| ||||||||| |||||||| ||||  ||||| |||  |||| ||||||||||||||||    
T  17551534 ggataagattaaaatagagtttatccattaatcaattcaacaacacttgtggataggat-caaaagaaacaaatccataaaa 17551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 95 - 474
Target Start/End: Original strand, 1807889 - 1808267
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| ||||||||||   ||||||||| ||| | ||||| |||||| |||||||||||||| ||| |||| |||||| || ||||  ||| ||||    
T  1807889 tctttattctgaagggacat---ttatcgaagggacaatgtttttaagaccattcttaattccgaatggacattaaaccgaaaagtgactatggtcttaa 1807985  T
Q  195 gaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgga--tggagaagagagaaagagttctcgaca 291  Q
    ||||||||||| |||| |||| |||||||| ||||||||  |||||||  ||||||||||||||| |  ||  ||||||||||| ||||||||| | |||    
T  1807986 gaacactcttaattccgaaggaacagaaaaaggagatgaatagaagaaagactcgtcaacacaagtcaagaaatggagaagagataaagagttcccaaca 1808085  T
Q  292 actcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagtta 390  Q
    ||||||| |||||| |||||||||  ||| |||||||||  |||| ||| | |||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  1808086 actcaat-gaaactttttggtgtgttttttgaactgagtgtagtcttctatttatatagagattttgtaactgttttagcaaaaattgcgacagcagtta 1808184  T
Q  391 ctctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    ||||||| |||||||||||||  ||  |||| ||||||||| |||||||| ||||  ||||| |||  |||| |||||||||||    
T  1808185 ctctaatggataagatcaaaatggagtttatccattaatcaattcaacaacacttgtggataggat-caaaagaaacaaatcca 1808267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 95 - 470
Target Start/End: Complemental strand, 24672979 - 24672605
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||   |||| ||| |  |||||||||||||||| ||||||| |||||||||||||| || | |||  ||||    
T  24672979 tctttattctgaagggacatatattatcgaatgaactatgttctttagacctttcttaattctgaagggacattataccgaatagagagtaaggccttaa 24672880  T
Q  195 gaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaact 294  Q
    ||||||| ||| |||| |||||||  ||||| |||| || |||||||||||||| | |||||||||| || |||||||||||||| ||||||||||||||    
T  24672879 gaacacttttaattccgaagggactaaaaatagagacgaggagaagaataactcattaacacaagctagagggagaagagagaaatagttctcgacaact 24672780  T
Q  295 caatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactct 394  Q
    | |||| ||||| ||||||||  ||| ||||||  | ||| |||| | || |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  24672779 cgatag-aactcattggtgtgattttcaactgaaataagttctctatttacatagaggttttgtaattggtttagctaaaattgtggcagtagttactct 24672681  T
Q  395 aatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaa 470  Q
    | | |||||  ||||||   ||||||  || ||| |||||||||||  ||   |||||||||||||||||||||||    
T  24672680 agtggataaagtcaaaaagaaacttaaccactaaccagttcaacaaatctcatggataagataaaaaataaacaaa 24672605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 140 - 482
Target Start/End: Complemental strand, 40125507 - 40125162
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | | ||||||||||||  ||| ||||||||||||||| |||| || |||||||||| |||||||| ||||    
T  40125507 aagaccattcttaattccgaagggacatttaaaacgaatagggactatggtcttaagaacactcttaattccgaacggacagaaaaaggagatgaagaga 40125408  T
Q  239 agaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagt 334  Q
    ||||  ||| ||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| ||||||||| ||||    
T  40125407 agaaagacttgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgttttttgaactgagtggagt 40125309  T
Q  335 cctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagtt 434  Q
    ||||| | |||||||||||| ||||| ||||||||||||||||| | ||  | |||||||||| |||||||| ||||  ||  |||| ||||||||||||    
T  40125308 cctctatttatatagagattctgtaactgttttagcaaaaattgagacaacaattactctaatggataagattaaaatggagtttatccattaatcagtt 40125209  T
Q  435 caacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  40125208 caacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 40125162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 380
Target Start/End: Original strand, 19166996 - 19167375
Alignment:
Q  15 tattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttattcc 104  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||     | |||||| || ||||| ||||||||||||||         |||||||||    
T  19166996 tattgaaagaatatttatataccgttaagatcattcttatttccggcagaacattattatttcaaaaagggactatgatcttaatagtactctttattcc 19167095  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    |||||||| ||  ||||||||   |||| ||||| |||||| |||||||||||||||||  |||| |||||| |||||||  ||| ||||||||||||||    
T  19167096 gaagggacttatattatcgaatgaactatgttttaaagaccattcttaattccgaagggtcattaaaccgaaaagggactatggtcttaagaacactctt 19167195  T
Q  205 acttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatag 300  Q
    | |||| ||||||||| |||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||| ||||||||| | |||||||||| |    
T  19167196 aattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagataaagagttcccaacaactcaat-g 19167294  T
Q  301 aaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcg 380  Q
    |||||||||||||||   |||||||||||| ||||| ||| | |||||||||||||||||| ||||| |||||||||||||    
T  19167295 aaactctttggtgtgttttttgaactgagtggagtcttctatttatatagagattttgtaactgtttcagcaaaaattgcg 19167375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 140 - 445
Target Start/End: Original strand, 17026411 - 17026711
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  17026411 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagaga 17026510  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcct 337  Q
    ||||  |||||||||||||||     |  ||||  ||  |||| ||| |||||||||||| ||||||||||||||||  ||| ||| ||||| |||||||    
T  17026511 agaaagactcgtcaacacaag-----tcaagaaaggaagaaga-ttcccgacaactcaat-gaaactctttggtgtgttttttgaattgagtggagtcct 17026603  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaa 437  Q
    || | |||||||||||| ||||||||||||||||||||||||  ||| | |||||||||| |||||||| |||| |||  |||| |||||||||||||||    
T  17026604 ctatttatatagagattctgtaattgttttagcaaaaattgcaacagcaattactctaatggataagattaaaattgagtttatccattaatcagttcaa 17026703  T
Q  438 caatactt 445  Q
    ||| ||||    
T  17026704 caacactt 17026711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 140 - 445
Target Start/End: Original strand, 17556903 - 17557203
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  17556903 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagaga 17557002  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcct 337  Q
    ||||  |||||||||||||||     |  ||||  ||  |||| ||| |||||||||||| ||||||||||||||||  ||| ||| ||||| |||||||    
T  17557003 agaaagactcgtcaacacaag-----tcaagaaaggaagaaga-ttcccgacaactcaat-gaaactctttggtgtgttttttgaattgagtggagtcct 17557095  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaa 437  Q
    || | |||||||||||| ||||||||||||||||||||||||  ||| | |||||||||| |||||||| |||| |||  |||| |||||||||||||||    
T  17557096 ctatttatatagagattctgtaattgttttagcaaaaattgcaacagcaattactctaatggataagattaaaattgagtttatccattaatcagttcaa 17557195  T
Q  438 caatactt 445  Q
    ||| ||||    
T  17557196 caacactt 17557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 30 - 476
Target Start/End: Complemental strand, 44925651 - 44925188
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    ||||||||||||| |||||||||| |||||| | || ||| ||  |||||| |||||||||||||||          ||||||| |||||||||||  ||    
T  44925651 tatatactgttaaaatcattcttatttccgacgggacattgttaatccaaatagggactatgatcttaaaagtactatttattctgaagggacatatatt 44925552  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| | ||| ||||| |||||| |||||||||||||||||| |||  |||||| | |||||  ||| ||||||||||||||| |||| ||||||||    
T  44925551 atcgaaggggctatgtttt-aagaccattcttaattccgaagggacattgaaccgaaaatggactatggtcttaagaacactcttaattccgaagggaca 44925453  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    ||||| |||||||| ||||| ||  ||||||||||||||| |  |  | |||||||||||||||||||  |||||||||||| ||||||||||| |||      
T  44925452 gaaaaaggagatgaagagaataaagactcgtcaacacaagtcaagaaagggagaagagagaaagagtttccgacaactcaat-gaaactctttgttgttt 44925354  T
Q  317 gtt-tgaactgagttgagtcc------tctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaa 409  Q
     || |||||| |||  |||||      | | | |||||||||||| ||||| ||||||||||||||||||  ||| |||||||||||| |||||||| ||    
T  44925353 tttgtgaactaagtgaagtcctatatttatatttatatagagattctgtaactgttttagcaaaaattgcaacagcagttactctaatggataagattaa 44925254  T
Q  410 aagtgaa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccata 476  Q
    || ||||  |||| |||||||||||||||||| ||||| ||||| ||| ||||| |||||||||||||    
T  44925253 aa-tgaagtttatccattaatcagttcaacaacacttctggatatgat-aaaaagaaacaaatccata 44925188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 445
Target Start/End: Original strand, 33417052 - 33417322
Alignment:
Q  178 agggacttaggtattaagaacactcttacttccaaagggacagaaaatg-gagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaaga 273  Q
    |||||||  ||| ||||||||||||||| ||||||||||||||||||   ||||||| ||||||||  ||||||||||||||| |  ||   ||||||||    
T  33417052 agggactatggtcttaagaacactcttaattccaaagggacagaaaaaatgagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaaga 33417151  T
Q  274 gagaaagagttctcgacaactcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaa 373  Q
    |||||||||||| |||||||||||| |||||||||| |||||  | |||||| ||| ||||||||| | |||||||||||||||||| ||||||||||||    
T  33417152 gagaaagagttcccgacaactcaat-gaaactctttagtgtgtttatgaactaagtggagtcctctatttatatagagattttgtaactgttttagcaaa 33417250  T
Q  374 aattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
    ||||||  ||  ||||||||| ||  ||||||| |||| ||||  |||| |||||||||||||||||| ||||    
T  33417251 aattgcaacaacagttactctcatgaataagattaaaa-tgaagtttatccattaatcagttcaacaacactt 33417322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 13 - 302
Target Start/End: Complemental strand, 22714739 - 22714441
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    ||||| |||| |||||||||||  |  ||||||||||||||||| ||||| ||||||||| |||||||| |||| |||||||||         ||||||     
T  22714739 aatatcgaaagaatatttatatgttaataagatcattcttaatttcgatgggatattattattccaaaaagggagtatgatcttaaaagtactctttatc 22714640  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    ||||||| |||||| ||||||||  ||||| ||| | |||||||||  || |||| |||||| ||||||||||||||||||| |    |||| |||||||    
T  22714639 ccgaaggaacatacattatcgaatggactatgttcttaagacctttactacttccaaagggacattataccgaatagggactaattccttaaaaacactc 22714540  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    ||| || | ||| ||  ||||  |||||||| |||||||||||||||| ||||||||||||| ||| || |  |||||||||||||||||||||||||||    
T  22714539 ttaatttcgaagtgaaggaaacaggagatgaggagaagaataactcgttaacacaagctggaggga-aataacgaaagagttctcgacaactcaatagaa 22714441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 7002209 - 7002299
Alignment:
Q  212 aagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    |||| |||||||| |||||||| ||| |||||||| ||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||    
T  7002209 aaggtacagaaaaaggagatgaggagtagaataacacgttaacataagctggagggagaacagagaaagagttctcgacaactcaatagaa 7002299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 482
Target Start/End: Original strand, 17026831 - 17026968
Alignment:
Q  343 tatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaata 442  Q
    |||||||||||| ||||| ||||||||||||||||||  ||| | |||||||||| |||||||| |||| |||  |||| |||||||||||||||||| |    
T  17026831 tatatagagattctgtaactgttttagcaaaaattgcaacagcaattactctaatggataagattaaaattgagtttatccattaatcagttcaacaaca 17026930  T
Q  443 cttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||  |||| ||||  |||| ||||||||||| |||||||    
T  17026931 cttgtggat-agat-caaaagaaacaaatccacaaaagtg 17026968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 482
Target Start/End: Original strand, 17557323 - 17557460
Alignment:
Q  343 tatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaata 442  Q
    |||||||||||| ||||| ||||||||||||||||||  ||| | |||||||||| |||||||| |||| |||  |||| |||||||||||||||||| |    
T  17557323 tatatagagattctgtaactgttttagcaaaaattgcaacagcaattactctaatggataagattaaaattgagtttatccattaatcagttcaacaaca 17557422  T
Q  443 cttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||  |||| ||||  |||| ||||||||||| |||||||    
T  17557423 cttgtggat-agat-caaaagaaacaaatccacaaaagtg 17557460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 31449520 - 31449415
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| | |||||  ||| ||||||||||||||| |||| ||||||    
T  31449520 ttatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaatggactatggtcttaagaacactcttaattccgaaggga 31449421  T
Q  218 cagaaa 223  Q
    ||||||    
T  31449420 cagaaa 31449415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 2965997 - 2966080
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattg-ttccaaaagggactatgatctt 95  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||| | || ||||||| ||| |||| |||||||||||||    
T  2965997 aatattgaaagaatatttatatactgttaaaatcattcttaatttcgacgggacattattgtttcaaaaaaggactatgatctt 2966080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 258
Target Start/End: Original strand, 36683947 - 36684187
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||||||||||  || | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||   |    
T  36683947 tatataccgttaagatcattcttaattatgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatataat 36684046  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggactta---ggtattaagaacactcttacttccaaaggg 216  Q
    ||||||  ||||| ||||| ||||||  ||||||||||||||||| |||| |||||| || |||      ||| ||||||||| ||||| |||| |||||    
T  36684047 atcgaatggactatgtttt-aagaccactcttaattccgaagggacattaaaccgaaaagagaccaccatggtcttaagaacattcttaattccgaaggg 36684145  T
Q  217 acagaaaatggagatgatgagaagaataactcgtcaacacaa 258  Q
    |||||||| | |||||| ||||| ||  ||||||||||||||    
T  36684146 acagaaaaagaagatgaagagaaaaaagactcgtcaacacaa 36684187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 315
Target Start/End: Complemental strand, 17953607 - 17953407
Alignment:
Q  119 tatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaaggga 217  Q
    |||||||| ||||| | | | |||||| |||||||||  ||||||| ||||||||||| | |||||   ||| |||||||||| |||| ||   ||||||    
T  17953607 tatcgaagggactatgctcttaagaccattcttaatttggaagggacattataccgaaaaagggaccatggttttaagaacacacttaattatgaaggga 17953508  T
Q  218 cagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtg 313  Q
    || ||||  |||||||| ||||| ||  | ||||||||||||| |  ||   ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17953507 cataaaaaaggagatgaagagaataaagattcgtcaacacaagtcaagaaagggagaagagagaaagagttctcgacaactcaatag-aactctttggtg 17953409  T
Q  314 tg 315  Q
    ||    
T  17953408 tg 17953407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 4237967 - 4237891
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| || |||||||||    
T  4237967 ttcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaatggacagaaa 4237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 4242706 - 4242630
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| || |||||||||    
T  4242706 ttcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaatggacagaaa 4242630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 15875249 - 15875138
Alignment:
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgac 290  Q
    |||||||||||| |||| ||||||||||||| | |||||| ||||||||  ||||||||||||||| |  |  |  ||||||||||||| |||| |||||    
T  15875249 agaacactcttaattccgaagggacagaaaaagaagatgaagagaagaaagactcgtcaacacaagtcaagaaagtgagaagagagaaaaagttatcgac 15875150  T
Q  291 aactcaatagaa 302  Q
    ||||||||||||    
T  15875149 aactcaatagaa 15875138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 18260461 - 18260546
Alignment:
Q  275 agaaagagttctcgacaactcaatagaaactctttggtgtgggtt-tgaactgagttgagtcctctgtatatatagagattttgtaa 360  Q
    ||||||||||||||||||||||| | ||||| |||||||||  || |||| ||||| ||||||||| | ||||||||||||||||||    
T  18260461 agaaagagttctcgacaactcaaca-aaactatttggtgtgatttatgaattgagtggagtcctctatttatatagagattttgtaa 18260546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 33100079 - 33100149
Alignment:
Q  340 gtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaa 410  Q
    ||||| ||| |||||||||||||| |||||| ||||||||| ||  | |||||||||| ||||||||||||    
T  33100079 gtatagataaagattttgtaattggtttagctaaaattgcgacaacaattactctaatggataagatcaaa 33100149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 28863956 - 28864009
Alignment:
Q  228 agatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaaga 281  Q
    |||||| |||||||||| ||||| ||||||||||||| ||| ||||||||||||    
T  28863956 agatgaggagaagaatagctcgttaacacaagctggagggacaagagagaaaga 28864009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 17794090 - 17794137
Alignment:
Q  267 gagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  17794090 gagaagagagaaagagttctcgataactcaata-aaattctttggtgtg 17794137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 27416063 - 27416153
Alignment:
Q  211 aaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    ||||||||||||||   |||||| ||| |||||| |||   |||||||| || |||||||||||| ||| |||| |||||||||||||||||    
T  27416063 aaagggacagaaaaaa-agatgaagaggagaatagctcaataacacaaggtgaatggagaagagataaaaagttatcgacaactcaatagaa 27416153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 28564549 - 28564470
Alignment:
Q  17 ttgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttcc-aaaagggactatgatctt 95  Q
    |||||| ||| |||||||||  |||||||||||||||||| ||| | || |||||| |||| |||||| |||||||||||    
T  28564549 ttgaaagaatgtttatatacatttaagatcattcttaatttcgacgggacattattattccaaaaaggaactatgatctt 28564470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 28559399 - 28559333
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaa 79  Q
    |||||||||| ||| |||||||||  |||||||||||||||||| ||| | || |||||| ||||||    
T  28559399 aatattgaaagaatgtttatatacatttaagatcattcttaatttcgacgggacattattattccaa 28559333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 37772166 - 37772250
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa-gaacactcttacttccaaagggacagaaa 223  Q
    |||||| |||||| ||||||| ||||| || |||||  | |||||  ||| |||| ||||||||||| |||||||||||||||||    
T  37772166 aagaccattcttatttccgaaaggataataaaccgacgatggactatggtcttaaagaacactcttaattccaaagggacagaaa 37772250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 5e-97; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 13 - 440
Target Start/End: Complemental strand, 19995141 - 19994705
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt--------ctttattcc 104  Q
    ||||||| || ||||||| |||||  |||||||||||||||||||  |  | | ||||||||||||||||||||||||||| |        ||||||||     
T  19995141 aatattggaagaatatttgtatacatttaagatcattcttaattcgtacaaaacattattgttccaaaagggactatgatcctaaagtactctttattct 19995042  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    |||||||||||| |||| |||| ||||| ||||| || |||||||||||||| ||||||| ||||||| ||||||||||| || | |||| |||||||||    
T  19995041 gaagggacatacattatagaagggactatgtttttaaaacctttcttaattctgaagggacattatactgaatagggactaagatcttaaaaacactctt 19994942  T
Q  205 acttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
    | || | ||||||||||||| |||||| | ||||||||||  |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  19994941 attttcgaagggacagaaaaaggagattaggagaagaatagatcgtcaacacaagctggagggagaagagagaaagagttctctacaactcaatataaac 19994842  T
Q  305 tctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataa 403  Q
    ||||||||||    |||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||| || ||  || ||||||||| |||||    
T  19994841 tctttggtgtaatttttgaactgagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattacgacatcagatactctaattgataa 19994742  T
Q  404 gatcaaaagtgaacttattcattaatcagttcaacaa 440  Q
    ||| |||||  || |||| ||||||||||||||||||    
T  19994741 gataaaaaggtaaattatccattaatcagttcaacaa 19994705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 13 - 475
Target Start/End: Original strand, 17599717 - 17600193
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    |||||||||| |||||||||| | ||||||||||||||||||||  || | || |||||||||  |||| |||| ||| |||||         ||| |||    
T  17599717 aatattgaaagaatatttatacattgttaagatcattcttaattatgaagtgacattattgttttaaaaagggattataatcttaaaagtactcttcatt 17599816  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
      ||| |||||||| |||||||  |||||| ||||| || |||||||||||||||||||||| |||||||| |||||  | | |||| ||||||||| ||    
T  17599817 ttgaatggacatacattatcgatttgactatgtttttaaaacctttcttaattccgaagggacattataccaaatagaaaataaggtcttaagaacattc 17599916  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    ||| || | |||||| | |||| | |||| | |||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  17599917 ttattttcgaagggatataaaaagaagattaggagaagaatagctcgtcaacacaagttggatggagaagagagaaagagttttcgacaactcaatagaa 17600016  T
Q  303 actctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaa----aattgcggcagtagttactctaat 397  Q
    ||||||| |||||   ||||||||||||  |||||||| | ||| |||||||||||||||| |||||| |||    ||||||||||  |||||||| |||    
T  17600017 actctttagtgtgatttttgaactgagtgaagtcctctatttatttagagattttgtaatttttttagtaaaaattaattgcggcaacagttactcaaat 17600116  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccat 475  Q
     ||||||||||||||  |||||||||||||||||||||||||| ||||  ||||| |||  |||| ||||||||||||    
T  17600117 ggataagatcaaaagaaaacttattcattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccat 17600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 140 - 483
Target Start/End: Original strand, 17914072 - 17914416
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| |||||||||||||||||| |||||| |||| | |||||  ||| |||||||||||||||  ||| || |||||||||| |||||||| |||||    
T  17914072 aagaccattcttaattccgaagggacattatatcgaaaatggactatggtcttaagaacactcttaaatccgaaaggacagaaaaaggagatgaggagaa 17914171  T
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcctc 338  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||  |||||| ||   |||||||||||  ||||||||    
T  17914172 gaatagctcgtcaacacaagctggagggagaagtgagaaagagttctcgaaaacacaatagaaacaatttggtttgatttttgaactgaggggagtcctc 17914271  T
Q  339 tgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaac 438  Q
    | |  ||||||||||||||||| | |||||||||||||||||| || |||||||||||  ||||| |||||||   ||||||| ||||||||||||||||    
T  17914272 tattaatatagagattttgtaacttttttagcaaaaattgcggtagaagttactctaacggataatatcaaaatgaaacttatccattaatcagttcaac 17914371  T
Q  439 aatacttcaggataagataaaaaataaacaaatccataaaagtga 483  Q
    || ||||  |||||| || ||||| ||| ||||||| ||||||||    
T  17914372 aacacttgtggataatatcaaaaagaaataaatccacaaaagtga 17914416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 13 - 474
Target Start/End: Complemental strand, 11559967 - 11559491
Alignment:
Q  13 aatattgaaataatatttata--tactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------cttta 100  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||||||||| || ||| || ||||||| |||||||||||||||         |||||    
T  11559967 aatattgaaatactttttataaatactgttaagatcattcttaattccgatgggacattgttattccaaatagggactatgatcttaaaagtactcttta 11559868  T
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaat-agggacttaggtattaagaaca 199  Q
    |||||||||||||||  ||||| ||  ||||| ||||| |||||| |||||||||||||||||| |||| |  |||  |||||||  ||| |||||||||    
T  11559867 ttccgaagggacatatattatcaaatggactatgtttttaagaccattcttaattccgaagggacattaaattgaaagagggactatggtcttaagaaca 11559768  T
Q  200 ctcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactca 296  Q
    |||||| |||| |||||||||||||||||||||| ||||||||  ||| | ||||||||| |  ||   ||||||||||||||||||||   ||||||||    
T  11559767 ctcttaattccgaagggacagaaaatggagatgaagagaagaaagacttgacaacacaagtcaagaaagggagaagagagaaagagttccacacaactca 11559668  T
Q  297 atagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactcta 395  Q
    || ||||||||||||||||  ||| ||||||||| ||||||||| | |||| ||||||| ||||| |||||||||||||||||||  |  ||||||||||    
T  11559667 at-gaaactctttggtgtgttttttgaactgagtggagtcctctatttataaagagattctgtaactgttttagcaaaaattgcgataacagttactcta 11559569  T
Q  396 atagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    || |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| |||||||||||    
T  11559568 atggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatcca 11559491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 13 - 445
Target Start/End: Complemental strand, 2699842 - 2699396
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttcc-aaaagggactatgatctt---------ctttatt 102  Q
    |||||||||| ||||||||||||  |||||||||||||||||||| || | || |||||| || | ||||||||||||||||||         |||||||    
T  2699842 aatattgaaagaatatttatatatcgttaagatcattcttaattctgacgggacattattatttcgaaaagggactatgatcttaatagtactctttatt 2699743  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    ||||||| || ||  ||||||||| ||||| ||||| ||||   |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||||||||    
T  2699742 ccgaaggaacttatattatcgaagggactatgtttttaagattattcttaattctgaagggacattaaaccgaaaagggactatggttttaagaacactc 2699643  T
Q  203 ttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggat---ggagaagagagaaagagttctcgacaactcaat 298  Q
    ||| |||| |||||||||||||  |||||||| ||||||||  |||||||||||||||    |    |||||||||||||||||||| | |||||| |||    
T  2699642 ttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaaaaaagggagaagagagaaagagttcccaacaactaaat 2699543  T
Q  299 agaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     |||||| |||||||||  ||| |||||||||  | |||||| | |||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||    
T  2699542 -gaaactatttggtgtgttttttgaactgagtgaattcctctatttatatagagattttgtaactgttttagtaaaaattgcgacagcagttactctaat 2699444  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
     |||||||| |||| |||  |||| |||||||||||||||||| ||||    
T  2699443 ggataagattaaaattgagtttatccattaatcagttcaacaacactt 2699396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 13 - 482
Target Start/End: Complemental strand, 16835906 - 16835431
Alignment:
Q  13 aatattgaaataatatt-tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt-----------cttt 99  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||| | || ||| || ||||||| ||||||||||| |||           ||||    
T  16835906 aatattgaaatatttttatatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgaccttaaaagtactctcttt 16835807  T
Q  100 attccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaaca 199  Q
    |||| ||||||||||   ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| |||||||||    
T  16835806 attctgaagggacat---ttatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaaca 16835710  T
Q  200 ctcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag---ctggatggagaagagagaaagagttctcgacaactca 296  Q
    ||||||  ||| |||||||||||||  ||||||| ||||||||  |||||||||||||||      || |||||||||||||||||||| ||||||||||    
T  16835709 ctcttaaatccgaagggacagaaaaatgagatgaagagaagaaagactcgtcaacacaagtcaagagagggagaagagagaaagagttcccgacaactca 16835610  T
Q  297 atagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactcta 395  Q
    || ||||||||||||||||   |||||||||||| ||||||||| | |||||||||||| ||||| |      |||||||||||| ||  ||||||||||    
T  16835609 at-gaaactctttggtgtgttttttgaactgagtggagtcctctatttatatagagattctgtaact------gcaaaaattgcgacaacagttactcta 16835517  T
Q  396 atagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     | |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  16835516 gtggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 16835431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 94 - 482
Target Start/End: Complemental strand, 20747958 - 20747569
Alignment:
Q  94 ttctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    ||||||||||||||||||||||  ||||| ||| ||||| ||||| |||| | |||||||||||||||||| |||||| || | || ||||  ||| |||    
T  20747958 ttctttattccgaagggacatatattatcaaagggactatgtttttaagatcattcttaattccgaagggacattatatcggaaagagactatggtctta 20747859  T
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgac 290  Q
    |||||| ||||| || | ||||||||  ||| |||||||| |||||||| ||||||||||| |||| |  ||   |||||||||||||||||||| ||||    
T  20747858 agaacattcttaatttcgaagggacaagaaaaggagatgaagagaagaaaaactcgtcaacgcaagtcaagaaagggagaagagagaaagagttc-cgac 20747760  T
Q  291 aactcaatagaaactctttggtgtgggtttg-aactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagtt 389  Q
    |||||||| ||||||||||||||||  |||  |||||||| ||||||||| | ||||||||||||| |||| ||||||||||||||||| | ||| ||||    
T  20747759 aactcaat-gaaactctttggtgtgattttttaactgagtggagtcctctatttatatagagatttggtaactgttttagcaaaaattgtgacagcagtt 20747661  T
Q  390 actctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||| |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  20747660 actctaatggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 20747569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 445
Target Start/End: Complemental strand, 12406085 - 12405670
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttctttattccgaagggac 112  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||| | || ||||||||||||||||||||||||||   ||| |     ||   |     
T  12406085 aatattgaaagaatatttatatactgttaagctcattcttaatttcgacgggacattattgttccaaaagggactatgat---cttaa-----aa---at 12405997  T
Q  113 atacgttat--cgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttcc 210  Q
    |  | ||||  ||||  ||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  12405996 actctttatttcgaaaggactacgtttttaagacttttcttaattctgaagggacattataccgaatagggactaaggtcttaagaacactcttatttcc 12405897  T
Q  211 aaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttg 310  Q
     |||||||||||||  ||||||| |||||||||| |||| ||||||||||||||    |||||||||||||||||||||||||||||| |||||| ||||    
T  12405896 gaagggacagaaaaatgagatgaggagaagaatagctcgccaacacaagctgga---ggaagagagaaagagttctcgacaactcaattgaaactttttg 12405800  T
Q  311 gtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaa 409  Q
    |||||   |||||| ||||| ||||  ||| | |||||| ||||       |||| |||||||||||| ||| || ||||| |||||| ||||| || ||    
T  12405799 gtgtgttttttgaattgagtggagttttctatttatataaagat-------ttgtgttagcaaaaattacggtagcagttattctaatggataaaataaa 12405707  T
Q  410 aagtg-aacttattcattaatcagttcaacaatactt 445  Q
    || || ||||||| |||| ||||||||||||| ||||    
T  12405706 aaatgaaacttatccatttatcagttcaacaacactt 12405670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 30 - 479
Target Start/End: Complemental strand, 6407589 - 6407131
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  6407589 tatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 6407493  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggac 218  Q
    ||| ||| ||||| ||||| |||||| |||||||||||||||| | |||| |||||| | ||||||  ||| |||||||||||||||  ||| |||||||    
T  6407492 atc-aagggactatgtttttaagaccattcttaattccgaaggaacattaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaagggac 6407394  T
Q  219 agaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| | |||||||||| ||||||||||| ||||    
T  6407393 agaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccaacaactcaat-gaaactctttgatgtg 6407295  T
Q  316 ggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
      ||| ||| ||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| |||| ||    
T  6407294 ttttttgaattgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaa-tg 6407196  T
Q  415 aa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaa 479  Q
    ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| ||||    
T  6407195 aagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaa 6407131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 13 - 474
Target Start/End: Complemental strand, 11534457 - 11533981
Alignment:
Q  13 aatattgaaataatatttata--tactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------cttta 100  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||| ||||| || ||| || ||||||| |||||||||||||||         |||||    
T  11534457 aatattgaaatactttttataaatactgttaagatcattcttaatttcgatgggacattgttattccaaatagggactatgatcttaaaagtattcttta 11534358  T
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaat-agggacttaggtattaagaaca 199  Q
    |||| ||||||||||  ||||| ||  ||||| ||||| |||||| || ||||||||||||||| |||| |  |||  |||||||  ||| |||||||||    
T  11534357 ttcctaagggacatatattatcaaatggactatgtttttaagaccatttttaattccgaagggacattaaattgaaagagggactatggtcttaagaaca 11534258  T
Q  200 ctcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactca 296  Q
    |||||| |||| |||||||| || |||||||||| ||||||||  ||| | ||||||||| |  ||   |||||||||||||||||||  | ||||||||    
T  11534257 ctcttaattccgaagggacaaaacatggagatgaagagaagaaagacttgacaacacaagtcaagaaagggagaagagagaaagagtttcccacaactca 11534158  T
Q  297 atagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactcta 395  Q
    || ||||||||||||||||  ||| |||||||||  |||||||| | |||| ||||||| ||||| |||||||||||||||||||| || ||||||||||    
T  11534157 at-gaaactctttggtgtgttttttgaactgagtgaagtcctctatttataaagagattctgtaactgttttagcaaaaattgcggtagcagttactcta 11534059  T
Q  396 atagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    || |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| |||||||||||    
T  11534058 atggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatcca 11533981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 95 - 440
Target Start/End: Complemental strand, 33687303 - 33686956
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtatta 193  Q
    ||||||||||||||| |||||  ||||||||| ||||| ||||| |||||| | ||||||| |||||||| |||| |||||| | ||||||  ||| |||    
T  33687303 tctttattccgaaggaacatatattatcgaagagactatgtttt-aagaccatacttaattgcgaagggacattaaaccgaaaaagggactatggtctta 33687205  T
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgac 290  Q
    |||| ||||||| |||  ||||||  ||||| |||||||| || |||||  ||||||||||||||| |  ||   |||||||||| ||||||||| ||||    
T  33687204 agaagactcttaattctgaagggatggaaaaaggagatgaagaaaagaaagactcgtcaacacaagtcaagaaagggagaagagaaaaagagttcccgac 33687105  T
Q  291 aactcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagtta 390  Q
    |||||||| ||||||||||||||||  |||||||||||| ||||||||| | |||||||||||| ||||||||||||| ||||||||||| ||| |||||    
T  33687104 aactcaat-gaaactctttggtgtgtttttgaactgagtggagtcctctatttatatagagattctgtaattgttttaacaaaaattgcgacagcagtta 33687006  T
Q  391 ctctaatagataagatcaaaagtgaacttattcattaatcagttcaacaa 440  Q
    ||||||| | |||||| ||||| ||  |||| ||||||||||||| ||||    
T  33687005 ctctaatggttaagattaaaagggagtttatccattaatcagttcgacaa 33686956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 438
Target Start/End: Complemental strand, 4157104 - 4156661
Alignment:
Q  13 aatattgaaataatatttatata--ctgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------cttta 100  Q
    |||||||||| ||||||||||||  |  |||||||||||||||||||||| | || |||||| ||| |||| |||| |||||||||         |||||    
T  4157104 aatattgaaagaatatttatatatcccattaagatcattcttaattccgacgggacattattattctaaaaagggattatgatcttaataatactcttta 4157005  T
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacac 200  Q
    |||||||||||| ||  |||| |||||||||| ||||| |||||| |||||||||||||||||| |||| |||||| | |||||  ||| |||||||||     
T  4157004 ttccgaagggacttatattattgaagtgactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaaggactatggtcttaagaacaa 4156905  T
Q  201 tcttacttccaaagggac---agaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaact 294  Q
    ||||| |||| |||||||   |||||| |||||| | || |||||  |||||| |||||||| || |  |  ||||||||||||||||||| ||||||||    
T  4156904 tcttaattccgaagggacagaagaaaaaggagataaagaaaagaaagactcgttaacacaagtctagaaagagagaagagagaaagagttcccgacaact 4156805  T
Q  295 caatagaaactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactc 393  Q
    |||| |||||| ||||||||    |||||||||||| ||||||| | | |||||| ||||| ||||| ||||||||||||||||||  ||  ||||||||    
T  4156804 caat-gaaactttttggtgtaatttttgaactgagtggagtcctttatttatatatagattctgtaactgttttagcaaaaattgcaacaagagttactc 4156706  T
Q  394 taatagataagatcaaaagtgaa-cttattcattaatcagttcaac 438  Q
    |||| | |||||| |||| ||||  |||| ||||||||||||||||    
T  4156705 taatgggtaagattaaaa-tgaagtttatccattaatcagttcaac 4156661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 445
Target Start/End: Complemental strand, 25314199 - 25313756
Alignment:
Q  17 ttgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa---gggactatgatctt---------ctttattcc 104  Q
    |||||||| | ||||||||| ||||||||||||||||||||||| | || ||| || |||||||    ||||||||||||||         ||||||||     
T  25314199 ttgaaatactttttatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggggactatgatcttaaaagtactctttattct 25314100  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    |||||||||||  ||||||||  ||||| ||||| |||| | ||||||||||  |||||  |||| |||    |||||||  ||| |||| |||||||||    
T  25314099 gaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaaccagcaagggactatggtcttaaaaacactctt 25314000  T
Q  205 acttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaataga 301  Q
    | |||| |||||| |||||| |||||||| || |||||  ||||||||||||||| |  ||   ||| |||| ||||||||||| |||||||||||| ||    
T  25313999 aattccgaagggatagaaaaaggagatgaagaaaagaaagactcgtcaacacaagtcaagaaagggataagatagaaagagttcccgacaactcaat-ga 25313901  T
Q  302 aactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaataga 400  Q
    |||||||||||||    |||||||| ||||||||| ||| | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||||| ||    
T  25313900 aactctttggtgtattttttgaactaagttgagtcatctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctaatgga 25313801  T
Q  401 taagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    |||||| ||||  ||  |||| |||||||||||||||||| ||||    
T  25313800 taagattaaaaaggagtttatccattaatcagttcaacaacactt 25313756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 17 - 445
Target Start/End: Complemental strand, 26201693 - 26201250
Alignment:
Q  17 ttgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa---gggactatgatctt---------ctttattcc 104  Q
    |||||||| | ||||||||| ||||||||||||||||||||||| | || ||| || |||||||    ||||||||||||||         ||||||||     
T  26201693 ttgaaatactttttatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggggactatgatcttaaaagtactctttattct 26201594  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    |||||||||||  ||||||||  ||||| ||||| |||| | ||||||||||  |||||  |||| |||    |||||||  ||| |||| |||||||||    
T  26201593 gaagggacatatattatcgaaaggactatgtttttaagatcattcttaattcgaaaggggcattaaaccagcaagggactatggtcttaaaaacactctt 26201494  T
Q  205 acttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaataga 301  Q
    | |||| |||||| |||||| |||||||| || |||||  ||||||||||||||| |  ||   ||| |||| ||||||||||| |||||||||||| ||    
T  26201493 aattccgaagggatagaaaaaggagatgaagaaaagaaagactcgtcaacacaagtcaagaaagggataagatagaaagagttcccgacaactcaat-ga 26201395  T
Q  302 aactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaataga 400  Q
    |||||||||||||    |||||||| ||||||||| ||| | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||||| ||    
T  26201394 aactctttggtgtattttttgaactaagttgagtcatctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctaatgga 26201295  T
Q  401 taagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    |||||| ||||  ||  |||| |||||||||||||||||| ||||    
T  26201294 taagattaaaaaggagtttatccattaatcagttcaacaacactt 26201250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 147 - 482
Target Start/End: Original strand, 14509463 - 14509801
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataa 245  Q
    |||||||||| ||||| | |||| || ||| |||||||  ||| ||||||||||||||| |||| ||||||| |||||  |||||||| ||||||||  |    
T  14509463 ttcttaattctgaaggtacattaaactgaaaagggactatggtcttaagaacactcttaattccgaagggacggaaaaaaggagatgaagagaagaaaga 14509562  T
Q  246 ctcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgt 341  Q
    || ||||||| ||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| ||||| ||| ||||||||| |    
T  14509563 cttgtcaacataagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgttttttgaacttagtggagtcctctat 14509661  T
Q  342 atatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaa 440  Q
     |||| ||||||||||||| ||||||||||||||||||| ||  | ||||||||||  ||||||| |||| ||||  |||| ||||||||||||||||||    
T  14509662 ttataaagagattttgtaaatgttttagcaaaaattgcgacaacaattactctaatgtataagattaaaa-tgaagtttatccattaatcagttcaacaa 14509760  T
Q  441 tacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     ||||  ||||| ||| ||||| ||||||||||| |||||||    
T  14509761 cacttgtggataggat-aaaaagaaacaaatccacaaaagtg 14509801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 128 - 482
Target Start/End: Original strand, 11428430 - 11428789
Alignment:
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggacagaaaat- 225  Q
    ||||| ||||| |||| | || ||||||||||||| | |||| |||||| | ||||||  ||| ||||||||||||| | |||  |||||||||||||      
T  11428430 gactatgtttttaagatcattattaattccgaaggaacattaaaccgaaaaagggactatggtcttaagaacactctcaattcggaagggacagaaaaaa 11428529  T
Q  226 ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-- 320  Q
    |||||||| ||||||||  ||||||||||| ||| |  ||   |||||||||||||||||||| |||||||||||| |||||| |||| ||||  |||      
T  11428530 ggagatgaagagaagaaatactcgtcaacataagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactttttgatgtgttttttt 11428628  T
Q  321 gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactta 420  Q
    ||||||||| ||||||||| | |||||||||||||||||| | |||||||||||||| ||  || |||||||||||| |||||||| ||||  ||  |||    
T  11428629 gaactgagtggagtcctctatttatatagagattttgtaactcttttagcaaaaattacgatagcagttactctaatggataagattaaaatggagttta 11428728  T
Q  421 ttcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    | |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  11428729 tccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 11428789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 22695055 - 22694854
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||| | || ||||||||| |||||||||||||||||||         ||||||||    
T  22695055 aatattgaaagaatatttctatactgttaagatcattcttaatttcgacgggacattattgtttcaaaagggactatgatcttaaaagtactctttattc 22694956  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||| ||||| |||| |||   |||| ||||| |||||||||||||||||  |||||| ||||||||||||||||||| |||| |||||||||||||    
T  22694955 cgaaggggcatacattattgaatgaactatgtttttaagacctttcttaattcttaagggacattataccgaatagggactaaggtcttaagaacactct 22694856  T
Q  204 ta 205  Q
    ||    
T  22694855 ta 22694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 276 - 438
Target Start/End: Complemental strand, 22694838 - 22694676
Alignment:
Q  276 gaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaa 374  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| ||||| ||| || |||||||| |||||||||||||||||| |||||||||||||    
T  22694838 gaaagagttctcgacaagtcaatagaaactctttggtgtgatttttgaacttagtggaatcctctgtttatatagagattttgtaactgttttagcaaaa 22694739  T
Q  375 attgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaac 438  Q
    |||||||||  | ||||||||||||||||||||||||  |||||||| ||| ||| ||||||||    
T  22694738 attgcggcaacaattactctaatagataagatcaaaatggaacttatccatgaat-agttcaac 22694676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 33 - 354
Target Start/End: Complemental strand, 11570472 - 11570138
Alignment:
Q  33 atactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgttatc 122  Q
    ||||||||||||||||||||||||| || | || ||| || ||||||| |||||||||||||||         ||||| ||||||||||||||  |||||    
T  11570472 atactgttaagatcattcttaattctgagg-gacattgttattccaaatagggactatgatcttaaaagtactctttaatccgaagggacatatattatc 11570374  T
Q  123 gaagtgactacgttttgaagacctttcttaattccgaagggatattataccg-aatagggacttaggtattaagaacactcttacttccaaagggacaga 221  Q
    |||  ||||| ||||| |||||| |||||||||||||||||| |||| | || || |||||||  ||| ||||||||||||||| |||| ||||||||||    
T  11570373 gaatggactatgtttttaagaccattcttaattccgaagggacattaaatcgaaagagggactatggtcttaagaacactcttaattccgaagggacaga 11570274  T
Q  222 aaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-gg 317  Q
    ||| |||||||| ||||||||  ||| | ||||||||| |  |  |  |||||||||||||||||||   | |||||||| ||||||||||||||||       
T  11570273 aaaaggagatgaagagaagaaagacttgacaacacaagtcaagaaagtgagaagagagaaagagttccgtagaactcaat-gaaactctttggtgtgttt 11570175  T
Q  318 tttgaactgagttgagtcctctgtatatatagagatt 354  Q
    |||||||||||| ||||||||| | |||| |||||||    
T  11570174 tttgaactgagtggagtcctctatttataaagagatt 11570138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 322 - 482
Target Start/End: Original strand, 5856650 - 5856809
Alignment:
Q  322 aactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttat 421  Q
    |||||||| ||||||||| | |||||||||||||||||| | ||||||||||||||||| |||||||| ||||||| |||||||| ||||  ||  ||||    
T  5856650 aactgagtagagtcctctatttatatagagattttgtaactattttagcaaaaattgcgacagtagtttctctaatggataagattaaaatggagtttat 5856749  T
Q  422 tcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     |||||||||| ||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  5856750 ccattaatcagatcaacaacacttatggatatgat-caaaagaaacaaatccacaaaagtg 5856809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 314
Target Start/End: Original strand, 12689416 - 12689634
Alignment:
Q  97 tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaaga 196  Q
    ||||||| |||| ||||||  |||| |||| ||||| ||||| |||||| ||||||||||||||||||  ||| |||||| | |||||  ||| |||| |    
T  12689416 tttattctgaagagacatatattattgaagggactatgtttt-aagaccattcttaattccgaagggacgttaaaccgaaaatggactatggtcttaaaa 12689514  T
Q  197 acactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag---ctggatggagaagagagaaagagttctcgacaac 293  Q
    ||||||||| |||| ||||||| | ||| |||||||| ||||||||  | | |||||||||||    |  |  ||||||||||||||||||  |||||||    
T  12689515 acactcttaattccgaagggactgtaaaaggagatgaagagaagaaagaattgtcaacacaagtcaataaagagagaagagagaaagagtttccgacaac 12689614  T
Q  294 tcaatagaaactctttggtgt 314  Q
    ||||| |||||||||||||||    
T  12689615 tcaat-gaaactctttggtgt 12689634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 8748425 - 8748588
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| | ||  | |||||||||| |||||||| ||||  ||      
T  8748425 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgagacaacaattactctaatggataagattaaaatggagt 8748524  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| | ||  ||||| |||  |||| ||||||||||| |||||||    
T  8748525 ttatccattaatcagttcaacaacaattgtggataggat-caaaagaaacaaatccacaaaagtg 8748588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 474
Target Start/End: Complemental strand, 17963989 - 17963834
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||| | | |||||||||||| ||||| ||||||| ||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  17963989 tttgaactaagtggagtcctttatttatatagagattctgtaactgttttaccaaaaattgcgacaacagttactctaatggataagattaaaatggagt 17963890  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| |||||||||||    
T  17963889 ttatccattaatcagttcaacaacacttgtggataggat-taaaagaaacaaatcca 17963834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 295
Target Start/End: Complemental strand, 2760019 - 2759865
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| |||||||  ||||||||| | || |||||| ||| | |  ||| ||||||||||||  | ||| ||||||| |||||| |||||||| ||||     
T  2760019 aagaccattcttaaaaccgaagggacaataaaccgaacaggaattgtggtcttaagaacactcaaa-ttctaaagggatagaaaaaggagatgaggagag 2759921  T
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactc 295  Q
    ||||||||||| ||||||||| | | ||||||||||||||||||| ||||||||||    
T  2759920 gaataactcgttaacacaagccgaagggagaagagagaaagagttatcgacaactc 2759865  T

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Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 17964287 - 17964085
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||  ||| |||||||  ||    
T  17964287 tatataccgttaagatcattcttaattccgacgcgacattgttcttccaaatagggactatgatcttaaaagtactctttattttgaatggacatatatt 17964188  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| | |||| | |||||  ||| || ||||||||| || |||| ||||||||    
T  17964187 atcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaacgaaaaaggactatggtcttgagaacactcataattccgaagggaca 17964089  T
Q  220 gaaa 223  Q
    ||||    
T  17964088 gaaa 17964085  T

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Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 11613499 - 11613417
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt 95  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||| || |  | |||||||||||||||| ||||||||||||    
T  11613499 aatattaaaagaatatttatatattgttaagatcattcttaattctgacggaacattattgttccaaaagtgactatgatctt 11613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 302
Target Start/End: Complemental strand, 12799510 - 12799399
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgac 290  Q
    ||||||||||||||| ||   |||||| | ||||  ||||| | |||||||||||||||| ||||  ||||||| ||||||||||||||||||| || ||    
T  12799510 ttaagaacactcttaattttgaagggataaaaaaatgagataaggagaagaataactcgttaacattagctggaaggagaagagagaaagagttttcaac 12799411  T
Q  291 aactcaatagaa 302  Q
    || |||||||||    
T  12799410 aattcaatagaa 12799399  T

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Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 22610037 - 22610114
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaa 224  Q
    ||||||||||||||| || ||||||||||| ||||| |  ||| ||||||||||||||| |||| |||||||| ||||    
T  22610037 ttcttaattccgaagtgacattataccgaaaagggattatggtcttaagaacactcttaattcctaagggacaaaaaa 22610114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11428358 - 11428402
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattc 57  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  11428358 aatattgaaataatttttatataccgttaagatcattcttaattc 11428402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 11613271 - 11613176
Alignment:
Q  386 agttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||||| |||||||||||||  || ||||| |||||||||||||||||| ||||  ||||| |||  |||| ||| ||||||| |||||||    
T  11613271 agttactctaatggataagatcaaaaaagatcttatccattaatcagttcaacaacacttgtggataggat-caaaagaaataaatccacaaaagtg 11613176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 15991214 - 15991152
Alignment:
Q  252 aacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||||  |||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  15991214 aacacaacttggagggagaagagagaaagagttgtcgataactcaatagaaa-tctttggtgtg 15991152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 11570059 - 11570000
Alignment:
Q  386 agttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    |||||||||||| |||||||| ||||  ||  |||| |||||||||||||||||||||||    
T  11570059 agttactctaatggataagattaaaatggagtttatccattaatcagttcaacaatactt 11570000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 19674403 - 19674448
Alignment:
Q  269 gaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  19674403 gaagagagaaagagttcccgacagctcaat-gaaactctttggtgtg 19674448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 22610126 - 22610162
Alignment:
Q  266 ggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    |||||||||||||| | ||||||||||||||||||||    
T  22610126 ggagaagagagaaaaatttctcgacaactcaatagaa 22610162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 32530528 - 32530436
Alignment:
Q  349 gagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaat 441  Q
    |||||||||||| || |||||| ||||| | | ||  ||||||| ||| |||||| |||||||   |||||| ||| ||||||||||||||||    
T  32530528 gagattttgtaactgatttagctaaaatagtgtcaacagttactgtaagagataatatcaaaataaaacttaatcagtaatcagttcaacaat 32530436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 158; Significance: 7e-84; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 94 - 480
Target Start/End: Original strand, 4413 - 4800
Alignment:
Q  94 ttctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    ||||||||||||||||||| ||  ||||||||| ||||| | ||| ||||| || |||||||||||||||| ||||||||||| | | |||  ||| |||    
T  4413 ttctttattccgaagggacgtatattatcgaagggactatgcttttaagacatt-cttaattccgaagggacattataccgaaaatgaactatggtctta 4511  T
Q  194 agaacactcttacttccaaagggacagaaa-atggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaa 292  Q
    ||||||| |||| |||| |||||||| ||| | |||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||    
T  4512 agaacacacttaattccgaagggacataaataaggagatgaggagaagaatagctcgtcaacacaagttgga-ggagaagagagaaagagttctcgaaaa 4610  T
Q  293 ctcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttac 391  Q
    ||||||| |||||    |||||   ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  4611 ctcaatataaactgcacggtgtaatttttgaactgagtggagtcctctgtatatatagagattttgtaattgttttagcaaaaattacagtagtagttac 4710  T
Q  392 tctaatagat-aagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaag 480  Q
    |||||| ||| ||||| ||||  |||||||| |||||||||||||||||| ||||  ||||||||| ||||| |||||||| || |||||    
T  4711 tctaatggataaagatgaaaatggaacttatccattaatcagttcaacaacacttgtggataagattaaaaagaaacaaattcacaaaag 4800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 3e-83; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 15 - 440
Target Start/End: Complemental strand, 19798746 - 19798308
Alignment:
Q  15 tattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatcttc---------tttattcc 104  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| | || |||||| |||||||| |||||||||||||||         ||||||||    
T  19798746 tattgaaagaatatttatataccgttaagatcattcttaattccgacgggacattattattccaaaaagggactatgatcttcatagtactctttattcc 19798647  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactctt 204  Q
    |||||||| ||  ||||||||| || || |||||||||||| ||||||||| |||||||| |||| | | || |||||||  ||| ||||||||||||||    
T  19798646 gaagggacttatattatcgaagggattatgttttgaagaccattcttaatttcgaagggacattaaatcaaaaagggactatggtcttaagaacactctt 19798547  T
Q  205 acttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaataga 301  Q
    | || | ||||||||||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||    
T  19798546 aattacgaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaaaggagaagagagaaagagttcccgacaactcaat-ga 19798448  T
Q  302 aactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaataga 400  Q
    |||||||||||||    |||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||  ||  |||||||||||| ||    
T  19798447 aactctttggtgtattttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcaacaacagttactctaatgga 19798348  T
Q  401 taagatcaaaagtgaacttattcattaatcagttcaacaa 440  Q
    |||||| ||||  ||  |||| ||||||||||||||||||    
T  19798347 taagattaaaatggagtttatccattaatcagttcaacaa 19798308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 13 - 445
Target Start/End: Original strand, 38621056 - 38621500
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||| | || |||||| || |||||||||||||||||||         ||||||||    
T  38621056 aatattgaaagaa-atttatataccgttaagatcattcttaattccgacgggacattattatttcaaaagggactatgatcttaatagtaatctttattc 38621154  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||||| ||  ||||| ||| ||||| ||||| |||| | || ||||||| ||||||| |||| | |||| |||||||  | | |||||||||||||    
T  38621155 cgaagggacttatattatcaaagggactatgtttttaagagcattattaattctgaagggacattaaaacgaaaagggactatgatcttaagaacactct 38621254  T
Q  204 tacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaata 299  Q
    || |||  |||| ||| ||||  |||||||| |||||||| |||||||||||||||| |  ||   |||||||||||||||||||| ||||||||||||     
T  38621255 taattcttaaggaacaaaaaaaaggagatgaagagaagaaaaactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat- 38621353  T
Q  300 gaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaata 398  Q
    ||||||||||||||||  ||| ||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||     
T  38621354 gaaactctttggtgtgttttttgaactgagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattgcgacaacagttactctaatg 38621453  T
Q  399 gataagatcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    |||||||| ||||  ||  |||| |||||||||||||||||| ||||    
T  38621454 gataagattaaaatggagtttatccattaatcagttcaacaacactt 38621500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 95 - 482
Target Start/End: Complemental strand, 39200417 - 39200029
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    |||||||| ||||||||| ||  ||||||||| ||||| ||||| |||||| |||||||||||||||||| |||| ||| || |||||||  ||||||||    
T  39200417 tctttatttcgaagggacttatattatcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccaaaaagggactatggtattaa 39200318  T
Q  195 gaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgaca 291  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||| |  |  | ||||||||||||||| |||| |||||    
T  39200317 gaacactcttaattccaaagggacagaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagggttcccgaca 39200218  T
Q  292 actcaatagaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttac 391  Q
    ||||||| ||||||||||||||||  ||| |||  ||| ||||||||| | |||||||||||| ||||  ||||||||||||||||||| ||| ||||||    
T  39200217 actcaat-gaaactctttggtgtgtttttaaaccaagtggagtcctctatttatatagagattatgtagctgttttagcaaaaattgcgacagcagttac 39200119  T
Q  392 tctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||  |||||||| ||||  ||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||| | |||||||    
T  39200118 tctaacggataagattaaaatggagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatcgacaaaagtg 39200029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 13 - 314
Target Start/End: Original strand, 16035970 - 16036280
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttcc-aaaagggactatgatctt---------ctttatt 102  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| || | || ||||||||||| ||||| ||||||||||||         |||||||    
T  16035970 aatattgaaagaatatttatatactattaagatcattcttaattcggaagggacattattgttccgaaaagagactatgatcttaaaagtactctttatt 16036069  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
     ||||||||||||| || |||||  ||||| ||||| ||||||||| |||||| |||||  | ||||||| ||||||||||| |||| ||||||||||||    
T  16036070 tcgaagggacatacattctcgaatggactatgttttcaagacctttattaattgcgaaga-acattatactgaatagggactaaggtcttaagaacactc 16036168  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    ||| |||  || |||||||||| ||||  || |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16036169 ttatttcagaaaggacagaaaaaggagtcgaggagaagaatagctcgtcaacacaagctggagggagaagagagaaagagttctcgacaacttaatagaa 16036268  T
Q  303 actctttggtgt 314  Q
    ||||||||||||    
T  16036269 actctttggtgt 16036280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 20 - 445
Target Start/End: Complemental strand, 47450966 - 47450527
Alignment:
Q  20 aaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagg 109  Q
    |||||||||||||||||  |||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         ||||||||||||||    
T  47450966 aaataatatttatataccattaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattccgaagg 47450867  T
Q  110 gacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttc 209  Q
    ||||||  ||||||||| ||||| ||||| |||||| |||||||||  ||||||  |||| |||||| |||||||  ||| |||| |||||||||| |||    
T  47450866 gacatatattatcgaagagactatgtttttaagaccattcttaattttgaaggggcattaaaccgaaaagggactatggtcttaaaaacactcttaattc 47450767  T
Q  210 caaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaact 305  Q
    | |||||||| ||||  || ||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| ||| |||||||| ||||||    
T  47450766 cgaagggacataaaaaaggtgatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgataactcaat-gaaact 47450668  T
Q  306 ctttggtgtgggtttgaa-ctgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataag 404  Q
    ||||| ||||  ||| || |||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||||| ||||||    
T  47450667 ctttgatgtgttttttaaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctaatggataag 47450568  T
Q  405 atcaaaagtgaacttattcattaatcagttcaacaatactt 445  Q
    || ||||  ||  |||| |||||||||||||||||| ||||    
T  47450567 attaaaatagagtttatccattaatcagttcaacaacactt 47450527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 95 - 482
Target Start/End: Complemental strand, 16649289 - 16648902
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||| ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| |||||||  ||| ||||    
T  16649289 tctttattctgaagggacatatattatcgaagggactatgtttt-aagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaa 16649191  T
Q  195 gaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag--ctggatggagaagagagaaagagttctcgacaa 292  Q
    ||||||||||| |||| |||||||| |||| ||||||||  |||||||  |||||||||||||||    | | |||||||||||||| ||||| ||||||    
T  16649190 gaacactcttaattccgaagggacaaaaaaaggagatgaatagaagaaagactcgtcaacacaagtcaagaagggagaagagagaaaaagttcccgacaa 16649091  T
Q  293 ctcaatagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttac 391  Q
    |||||| |||||| |||||||||   |||||||||||| ||||||||| | |||||||||||| ||||| | ||||| ||||||||||| ||  ||||||    
T  16649090 ctcaat-gaaactttttggtgtgttttttgaactgagtggagtcctctatttatatagagattctgtaactattttaacaaaaattgcgacaacagttac 16648992  T
Q  392 tctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||| |||||||| |||| ||||  |||| |||||||||||||||||| ||||  | ||| |||  |||| ||||||||||| |||||||    
T  16648991 tctaatggataagattaaaa-tgaagtttatccattaatcagttcaacaacacttgtgaataggat-caaaagaaacaaatccacaaaagtg 16648902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 30 - 482
Target Start/End: Original strand, 25844120 - 25844584
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || |||  | ||||||| |||||||||||||||         |||||| | ||||||||||   ||    
T  25844120 tatataccgttaagatcattcttaattccgacgggacattgctattccaaatagggactatgatcttaaaagtactctttatcctgaagggacat---tt 25844216  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggac 218  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| | ||||||  ||| |||||||||||||||  | | |||||||    
T  25844217 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaaattcgaagggac 25844316  T
Q  219 agaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    ||||||  |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25844317 agaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgt 25844415  T
Q  315 gggttt--gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaag 412  Q
    |  |||  |||| |||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| ||||     
T  25844416 gtttttttgaaccgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaat 25844515  T
Q  413 tgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     ||  |||| |||||||||||||||||| ||||  ||||| |||  |||  ||||||||||| |||||||    
T  25844516 ggagtttatccattaatcagttcaacaacacttgtggataggat-caaaggaaacaaatccacaaaagtg 25844584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 95 - 440
Target Start/End: Complemental strand, 33300901 - 33300551
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggactta-ggtatta 193  Q
    |||||||||||||||||||||  ||||||||| ||||| ||||| |||||| |||||| ||||||||||| |||| ||| || | |||  || |||  ||    
T  33300901 tctttattccgaagggacatatattatcgaagggactatgtttttaagaccgttcttagttccgaagggacattaaaccaaaaaaggaactatggtccta 33300802  T
Q  194 agaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcga 289  Q
    |||||||| ||| |||| |||| ||||||||  |||||||| || |||||  ||| ||||||||||| |  ||   |||||||||||||||||||| |||    
T  33300801 agaacacttttaattccgaaggaacagaaaaaaggagatgaagaaaagaaagacttgtcaacacaagtcaagaaagggagaagagagaaagagttcccga 33300702  T
Q  290 caactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagt 388  Q
    ||| ||||| ||||||||||||||||  ||| ||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||  ||| |||    
T  33300701 caattcaat-gaaactctttggtgtgttttttgaactgagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattgcaacagcagt 33300603  T
Q  389 tactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaa 440  Q
    ||||||||| |||||||| ||||  ||  |||| ||||||||||||||||||    
T  33300602 tactctaatggataagattaaaatggagtttatccattaatcagttcaacaa 33300551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 140 - 440
Target Start/End: Original strand, 16833958 - 16834262
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgaga 238  Q
    |||||| |||||||||||||||||| |||| | || | |||||||  ||| ||||||||||||||| |||| |||||||||||||  |||||||| ||||    
T  16833958 aagaccattcttaattccgaagggacattaaatcggaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagaga 16834057  T
Q  239 agaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg-gtttgaactgagttgagt 334  Q
    ||||  |||| |||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||||||||||||||   ||||||||| ||| ||||    
T  16834058 agaaagactcatcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtattgtttgaactaagtggagt 16834156  T
Q  335 cctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagt 433  Q
    ||||| | |||||||||||||||||| ||||||||| |||||||||  |  | |||||||||| |||||||| |||| ||||  |||| |||||||||||    
T  16834157 cctctatttatatagagattttgtaactgttttagccaaaattgcgataacaattactctaatggataagattaaaa-tgaagtttatgcattaatcagt 16834255  T
Q  434 tcaacaa 440  Q
    |||||||    
T  16834256 tcaacaa 16834262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 256 - 482
Target Start/End: Original strand, 20107953 - 20108180
Alignment:
Q  256 caagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagatt 354  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||   ||| ||||||||| ||||||| | | ||||||||||||    
T  20107953 caagctgcagggagaagagagaaagagttctcgacaactcaatagaatctctttggtgtaattttagaactgagtagagtcctatatttatatagagatt 20108052  T
Q  355 ttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataag 454  Q
    || ||| |||||||||||||||| |  ||  ||||||| |||| |||||||| ||||  |||||||| ||||||| |||||||||| ||||  | |||||    
T  20108053 ttttaactgttttagcaaaaattacaacaacagttactttaatggataagattaaaaaagaacttatccattaattagttcaacaacacttatgaataag 20108152  T
Q  455 ataaaaaataaacaaatccataaaagtg 482  Q
    || ||||| ||||||||||  |||||||    
T  20108153 atcaaaaagaaacaaatccccaaaagtg 20108180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 445
Target Start/End: Original strand, 8138212 - 8138410
Alignment:
Q  238 aagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttgaactgagttgagtcct 337  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||       | ||   |   ||||||||||||  ||| ||    
T  8138212 aagaatagctcgtcaatacaagctgaatggagaagagagaaagagttctcgacaactcaata-------tgtgtaatt--tttgaactgagtgaagttct 8138302  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaa 437  Q
    || | |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||  |||||||||||||| |||||||| ||||||| |||||||    
T  8138303 ctatttatatagagattttgtaactgttttagcaaaagttgcagcagtagttactctaacggataagatcaaaagggaacttatccattaatgagttcaa 8138402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 315
Target Start/End: Original strand, 7882468 - 7882648
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggaca-gaaaatggagatgatgag 237  Q
    |||||| |||||||||| ||||||| ||||||||||| | ||||||  ||| ||||||||||||||| |||||||||||||  |||| |||||||| |||    
T  7882468 aagaccattcttaattctgaagggacattataccgaaaaagggactatggtcttaagaacactcttaattccaaagggacataaaaaaggagatgaagag 7882567  T
Q  238 aagaataactcgtcaacacaagct---ggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||  ||||||||||||||| |     | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7882568 aagaaagactcgtcaacacaagttaagaaagggagaagagagaaagagttctcgacaactcaatagaaactctttgatgtg 7882648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 140 - 315
Target Start/End: Original strand, 12260477 - 12260652
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa-atggagatgatgaga 238  Q
    |||||| | |||||||| ||||||| ||||||||||| | |||||  ||| |||| |||||||||| |||||||||||  | || | |||||||| ||||    
T  12260477 aagaccatccttaattctgaagggacattataccgaaaatggactatggtcttaaaaacactcttaattccaaagggatgggaataaggagatgaagaga 12260576  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||| || |||||||||||    
T  12260577 agaataactcgttaacacaagctgaagggagaagagagaaagagttctcaacaactcaatag-aattctttggtgtg 12260652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 10140462 - 10140662
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||  ||||||||||   ||    
T  10140462 tatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattatgaagggacat---tt 10140558  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  10140559 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttccgaagggaca 10140658  T
Q  220 gaaa 223  Q
    ||||    
T  10140659 gaaa 10140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 10135694 - 10135894
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||  ||||||||||   ||    
T  10135694 tatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattatgaagggacat---tt 10135790  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||| ||||||| |||| ||||||||    
T  10135791 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaatactcttatttccgaagggaca 10135890  T
Q  220 gaaa 223  Q
    ||||    
T  10135891 gaaa 10135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 26927449 - 26927247
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| |  | ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  26927449 tatataccgttaagatcattcttaattccgacggaacattgttattccaaatagggactatgatcttaaaaatactctttattctgaagggacatatatt 26927350  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||| | |||||| ||||||||||| ||||||||||| |||||| |||||||  ||| ||||||||||||||| || ||||||||||    
T  26927349 atcgaagggactatgttgt-aagaccattcttaattccaaagggatattaaaccgaaaagggactatggtcttaagaacactcttaatttcaaagggaca 26927251  T
Q  220 gaaa 223  Q
    ||||    
T  26927250 gaaa 26927247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 10135990 - 10136153
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  10135990 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 10136089  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  10136090 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 10136153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 26927151 - 26926988
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  26927151 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 26927052  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  26927051 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 26926988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 353
Target Start/End: Original strand, 11806819 - 11806961
Alignment:
Q  212 aagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttgg 311  Q
    ||||||||||||| |||||||| |||||||||| ||| |||||||||| |||| | |||||||||||| ||||||| | |||||||||||||||||||||    
T  11806819 aagggacagaaaaaggagatgaggagaagaatagctcatcaacacaagatggaggaagaagagagaaatagttctcaataactcaatagaaactctttgg 11806918  T
Q  312 tgt-gggtttgaactgagttgagtcctctgtatatatagagat 353  Q
     ||    |||||| ||||| ||||||||| | |||||||||||    
T  11806919 cgtaatttttgaaatgagtggagtcctctatttatatagagat 11806961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 40166338 - 40166495
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt--------ctttattcc 104  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || |  | |||||| || |||||||||||||||||||         ||||||||    
T  40166338 aatattgaaagaatatttatatactgttaagatcattcttaattcagacggaacattattatttcaaaagggactatgatcttaatagtacttttattcc 40166437  T
Q  105 gaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagg 162  Q
    |||||||| ||  ||||| ||| ||||| ||||| |||||| ||||||||||||||||    
T  40166438 gaagggacttatattatcaaagggactatgtttttaagaccattcttaattccgaagg 40166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 223
Target Start/End: Complemental strand, 51041231 - 51041037
Alignment:
Q  38 gttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgttatcgaagt 127  Q
    ||||||||||||||||||||||||| || ||| || ||||||| |||||||||||||||         ||||||||  |||| |||||  |||||||||     
T  51041231 gttaagatcattcttaattccgatgggacattgttattccaaatagggactatgatcttaaaagtactctttattctaaaggaacatatattatcgaagg 51041132  T
Q  128 gactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||| ||||||| |||| ||||||||||||    
T  51041131 gactatgtttt-aagaccattcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaatactcttaattccgaagggacagaaa 51041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 39588107 - 39587792
Alignment:
Q  20 aaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagg 109  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| | || ||| |  ||||||| |||||||||||||||         ||||||||||| ||    
T  39588107 aaataatatttatataccgttaagaccattcttaatttcgacgggacattgtcattccaaatagggactatgatcttaaaagtattctttattccgatgg 39588008  T
Q  110 gacatacgttatcgaagtgactacgttttgaagacc--------tttcttaattccgaagggatattataccgaatagggacttaggtattaagaacact 201  Q
    ||||||  ||||||||| ||||  ||||| ||||||        |||||||||||  || ||| |||| |||| | |||||||  ||| |||||||||||    
T  39588007 gacatatattatcgaagggactgtgtttttaagaccatttttaatttcttaattcataatgga-attaaaccggaaagggactatggtcttaagaacact 39587909  T
Q  202 cttacttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaagct---ggatggagaagagagaaagagttctcgacaactcaa 297  Q
    |||| |||| ||||||||| |||| |||||||| ||||||||  ||||||||||||||| |   | |||||||||||||||| |||||  ||||||||||    
T  39587908 cttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagttaaggaatggagaagagagaaatagttcctgacaactcaa 39587809  T
Q  298 tagaaactctttggtgtg 315  Q
    | |||||| ||| |||||    
T  39587808 t-gaaactatttagtgtg 39587792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 314
Target Start/End: Complemental strand, 23192439 - 23192261
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacag-aaaatggagatgatgag 237  Q
    |||||| |||||||||||||| ||| ||| | |||||| |||||||  ||| ||||||||||||||| |||| ||| ||||| |||| |||||||| |||    
T  23192439 aagaccattcttaattccgaatggacatttaaaccgaaaagggactatggtcttaagaacactcttaattccgaagtgacagaaaaagggagatgaagag 23192340  T
Q  238 aagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    |||||  || |||||||||||| |  |  | |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  23192339 aagaaagacccgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgt 23192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 10140758 - 10140921
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||| | ||| ||||||||| | |||| ||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  10140758 tttgaattaagtggagtcctctatttatacagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 10140857  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| ||||||||||||||| || ||||  ||||| |||  |||| ||||||||||| |||||||    
T  10140858 ttatccattaatcagttcaataacacttgtggatatgat-caaaagaaacaaatccacaaaagtg 10140921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 51040939 - 51040789
Alignment:
Q  331 gagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaat 429  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| ||||| || |||| ||||  |||| |||||||    
T  51040939 gagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataaaattaaaa-tgaagtttatccattaat 51040841  T
Q  430 cagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||||||||| ||||  |||||||||  |||  ||||||||||| |||||||    
T  51040840 cagttcaacaacacttgtggataagat-caaatgaaacaaatccacaaaagtg 51040789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 3094528 - 3094633
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| ||||||||| |||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  3094528 ttatcgaagggactatgctgttaagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 3094627  T
Q  218 cagaaa 223  Q
    ||||||    
T  3094628 cagaaa 3094633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 299
Target Start/End: Complemental strand, 28434290 - 28434088
Alignment:
Q  94 ttctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    ||||||||| ||||| ||||||  ||||||||  ||||| | ||| |||||| ||||||||| |||||||| |||||||| || | | |||  | | |||    
T  28434290 ttctttatttcgaagagacatatattatcgaatggactatgcttttaagaccattcttaatttcgaagggagattataccaaaaaag-actatgttctta 28434192  T
Q  194 agaacactcttacttccaaagggacagaaa-atggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaa 292  Q
    |||| ||||||| |||| ||||||| |||| | |||||| | |||||||||| ||||| |||| ||  |||| ||||||||||||  || ||||||||||    
T  28434191 agaaaactcttaattccgaagggacggaaataaggagataaggagaagaatagctcgttaacataaattgga-ggagaagagaga--gaattctcgacaa 28434095  T
Q  293 ctcaata 299  Q
    |||||||    
T  28434094 ctcaata 28434088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 314
Target Start/End: Original strand, 40166493 - 40166624
Alignment:
Q  186 aggtattaagaacactcttacttccaaagggacagaaaa-tggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaaga 281  Q
    |||| ||||||||||||||| |||| |||||||| |||| ||||||||  ||||| ||  |||||||||||| || |  ||   ||||||||||||||||    
T  40166493 aggtcttaagaacactcttaattccgaagggacaaaaaaatggagatggagagaataaagactcgtcaacacgagtcaagaaaaggagaagagagaaaga 40166592  T
Q  282 gttctcgacaactcaatagaaactctttggtgt 314  Q
    |||| |||||||||||| ||||||||| |||||    
T  40166593 gttcccgacaactcaat-gaaactcttaggtgt 40166624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 370
Target Start/End: Complemental strand, 10999377 - 10999271
Alignment:
Q  264 atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaatt 362  Q
    |||||||||||| ||| ||||||||||||||||||| ||| | |||||||||   |||||||| ||| || |||||||| ||||| |||||| | |||||    
T  10999377 atggagaagagataaaaagttctcgacaactcaata-aaattatttggtgtgatttttgaactaagtggactcctctgtttatatggagattctataatt 10999279  T
Q  363 gttttagc 370  Q
     |||||||    
T  10999278 attttagc 10999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 11806700 - 11806771
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaaggg 84  Q
    |||||||||| ||||||||||||||| ||| || ||||||| ||| || | || ||||||||||||||||||    
T  11806700 aatattgaaagaatatttatatactgctaaaataattcttatttctgacgggacattattgttccaaaaggg 11806771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 11806958 - 11807037
Alignment:
Q  403 agatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||| |||||||| ||||||| ||||| ||||  |||  ||||||||| ||||| ||||||||||| |||||||    
T  11806958 agatcaaaagggaacttatccattaataagttcgacaacgcttgtggataagatcaaaaagaaacaaatccacaaaagtg 11807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 13 - 481
Target Start/End: Original strand, 29523 - 30001
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt--------ctttattc 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| ||||||||||||||        ||| ||||    
T  29523 aatattgaaagaatatttatatactgttaagatcattcttaatttcgacgagacattattattccaaaaagggactatgatcttaatagactcttcattc 29622  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    ||||||||| ||  ||||| ||| ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| ||||| |  | | |||||||||||||    
T  29623 cgaagggacttatattatcaaagggactatgtttttaagaccattcttaattctgaagggacattaaaccgaagagggaatatgatcttaagaacactct 29722  T
Q  204 tacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaata 299  Q
    || |||| |||||||||||||  |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||| ||||  ||||||||||||     
T  29723 taattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaaaagtttccgacaactcaat- 29821  T
Q  300 gaaactctttggtgtgggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatag 399  Q
    ||||||||||||||||  |||||||||| | ||||||||| | |||||||||||| | ||| |||||||| |||||||||| ||  |||||||||||| |    
T  29822 gaaactctttggtgtgtttttgaactgattggagtcctctatttatatagagattctataactgttttagaaaaaattgcgacaacagttactctaatgg 29921  T
Q  400 ataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagt 481  Q
    ||||||| ||||  ||  |||| ||||||||| |||||||| ||||  ||||| ||||||||  ||||||||||| ||||||    
T  29922 ataagattaaaatggagtttatccattaatcaattcaacaacacttgtggataggataaaaa--aaacaaatccacaaaagt 30001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 13 - 315
Target Start/End: Original strand, 25803 - 26117
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||         |||||||    
T  25803 aatattgaaagaatatttatataccgttaagatcattcttaattccgacgagacattattattccaaaaagggactatgatcttaatagcactctttatt 25902  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
    |||||||||| ||  ||||||||| ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| |||||||  ||| ||||||||| ||    
T  25903 ccgaagggacttatattatcgaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaagaacaatc 26002  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaata 299  Q
     || |||| |||||||  |||| |||||||| ||||||||  |||| |||||||||| |  |  | |||||||||||||||||||| || |||||||||     
T  26003 gtaattccgaagggacgaaaaaaggagatgaagagaagaaagactcatcaacacaagtcaagaaagggagaagagagaaagagttcccggcaactcaat- 26101  T
Q  300 gaaactctttggtgtg 315  Q
    ||||||||||||||||    
T  26102 gaaactctttggtgtg 26117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 37248532 - 37248068
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  37248532 tatatactgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 37248433  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggac 218  Q
    ||||||| ||||| ||||| |||| | |||||||||| ||||||| |||| |||||| | ||||||  ||| |||||||||||||||  ||| |||||||    
T  37248432 atcgaagggactatgtttttaagatcattcttaattctgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaagggac 37248333  T
Q  219 agaaaatggagatgatgagaagaataactcgtcaacacaagct--ggatg-gagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||| |||||||| ||||||||  |||||||||||||||    | | | ||||||||||||||||||| |||||||||||| |||||||||||||||     
T  37248332 agaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagagagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtt 37248234  T
Q  316 ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
      |||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  ||    
T  37248233 t-tttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatgga 37248135  T
Q  416 -acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
       |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  37248134 gttttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 37248068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 140 - 482
Target Start/End: Original strand, 39518882 - 39519223
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||  |||| ||||||||||||| |||||||| ||||    
T  39518882 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaagggacagaaaaaggagatgaagaga 39518981  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg-ggtttgaactgagttgagtcct 337  Q
    ||||  ||||||||||||||| |  | |||||||||||||||||||| ||||||||||||| |||||||||||||||   |||||||||||| |||||||    
T  39518982 agaaagactcgtcaacacaag-tcaagggagaagagagaaagagttcccgacaactcaata-aaactctttggtgtgttttttgaactgagtggagtcct 39519079  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttca 436  Q
    || | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||| | |||||||| |||| ||||  |||| ||||||||||||||    
T  39519080 ctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctagtggataagattaaaa-tgaagtttatccattaatcagttca 39519178  T
Q  437 acaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| ||||  ||||| |||  |||||||||||||||| |||||||    
T  39519179 acaacacttgtggataggat-caaaataaacaaatccacaaaagtg 39519223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 140 - 482
Target Start/End: Original strand, 39523521 - 39523862
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||  |||| ||||||||||||| |||||||| ||||    
T  39523521 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactctttattccgaagggacagaaaaaggagatgaagaga 39523620  T
Q  239 agaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcct 337  Q
    ||||  ||||||||||||||| |  | |||||||||||||||||||| ||||||||| ||| ||| |||||||||||  ||| ||||||||| |||||||    
T  39523621 agaaagactcgtcaacacaag-tcaagggagaagagagaaagagttcccgacaactcgata-aaattctttggtgtgttttttgaactgagtggagtcct 39523718  T
Q  338 ctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttca 436  Q
    || | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| |||| ||||  |||| ||||||||||||||    
T  39523719 ctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaa-tgaagtttatccattaatcagttca 39523817  T
Q  437 acaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| ||||  ||||| |||  |||||||||||||||| |||||||    
T  39523818 acaacacttgtggataggat-caaaataaacaaatccacaaaagtg 39523862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 30 - 445
Target Start/End: Original strand, 12103393 - 12103818
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||||||||||||||   |||||| || ||||||| |||||||||||||||         || ||||| ||||| || ||  ||    
T  12103393 tatataccgttaagatcattcttaattccgacaggatattgttattccaaatagggactatgatcttaaaagtactctatattctgaaggcacgtatatt 12103492  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||| | ||| |||||| |||||||||||| |||||| ||| |||  ||| ||||| ||||||||| |||| ||||||||    
T  12103493 atcgaagggactaggtttt-aagatcattcgtaattctgaagggatattaaaccgaaaaggaactatggtcttaagtacactcttaattccgaagggaca 12103591  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaagc---tggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    |||||||||||||| ||||||||  |||||||||||||||    |  | ||||||||||||  |||||| |||||||||||| |||||| |||||||||     
T  12103592 gaaaatggagatgaagagaagaaagactcgtcaacacaagtcaataaagggagaagagaga--gagttcccgacaactcaat-gaaactatttggtgtgt 12103688  T
Q  317 gtttgaa-ctgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtga 415  Q
    |||| || |||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||| ||  |||||||||||  |||||||| ||||  ||    
T  12103689 gttttaaactgagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattgcgacaacagttactctaaaggataagattaaaatgga 12103788  T
Q  416 acttattcattaatcagttcaacaatactt 445  Q
      |||| |||||||||||||||||| ||||    
T  12103789 gtttatccattaatcagttcaacaacactt 12103818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 67 - 304
Target Start/End: Complemental strand, 23757505 - 23757259
Alignment:
Q  67 attattgttccaaaagggactatgatcttc---------tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattcc 157  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  23757505 attattgttccaaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattcc 23757406  T
Q  158 gaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacaca 257  Q
    |||| || |||||||||||| |||||| |||| ||||||| ||||||| |||| ||||| ||||||| ||| |||| |||||||||| |||||||||| |    
T  23757405 gaagtgacattataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcagaaaaaggatatgaggagaagaatagctcgtcaacata 23757306  T
Q  258 agctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
    |||| || |||||||||| ||||||||||||||||||||||||||||    
T  23757305 agctagagggagaagagaaaaagagttctcgacaactcaatagaaac 23757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 67 - 304
Target Start/End: Complemental strand, 23822961 - 23822715
Alignment:
Q  67 attattgttccaaaagggactatgatcttc---------tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattcc 157  Q
    |||||||||||||||||||||||||||||          |||||||| ||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  23822961 attattgttccaaaagggactatgatcttaaaagtactatttattcccaagggacatacattatcgaagggactatgtttttaagacctttcataattcc 23822862  T
Q  158 gaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacaca 257  Q
    |||| || |||||||||||| |||||| |||| ||||||| ||||||| |||| ||||| ||||||| ||| |||| |||||||||| |||||||||| |    
T  23822861 gaagtgacattataccgaattgggactaaggtcttaagaaaactcttatttccgaaggggcagaaaaaggatatgaggagaagaatagctcgtcaacata 23822762  T
Q  258 agctggatggagaagagagaaagagttctcgacaactcaatagaaac 304  Q
    |||| || |||||||||| ||||||||||||||||||||||||||||    
T  23822761 agctagagggagaagagaaaaagagttctcgacaactcaatagaaac 23822715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 142 - 482
Target Start/End: Complemental strand, 16115840 - 16115499
Alignment:
Q  142 gacctttcttaattccgaagggatattata-ccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaag 240  Q
    |||| ||||||| | | |||||| |||||| ||||| ||||| |  ||| ||||||||||||||| |||  || | ||| |||| |||||||| |||||     
T  16115840 gaccattcttaacttcaaagggacattataaccgaaaagggattatggtcttaagaacactcttaattctgaaagaacaaaaaaaggagatgaggagaaa 16115741  T
Q  241 aataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctct 339  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||  ||||||||||| || ||||||||||||  ||| ||||||||| || ||||||    
T  16115740 aataactcgttaacacaagctggagggagatgagagaaagagttcttaacaactcaatataa-ctctttggtgtgatttttgaactgagtggaatcctct 16115642  T
Q  340 gtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaaca 439  Q
    || |||||||||||||||||| ||||||||| ||||||||||||  |  |||| |||| ||||||||||||||  ||||||  || ||||||||||||||    
T  16115641 gtttatatagagattttgtaaatgttttagctaaaattgcggcaacatgtactttaatggataagatcaaaaggaaacttaaccactaatcagttcaaca 16115542  T
Q  440 atacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    | | ||  ||| | ||||||||| ||| ||||||| |||||||    
T  16115541 acaattgtggaaatgataaaaaagaaagaaatccacaaaagtg 16115499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 440
Target Start/End: Original strand, 40148244 - 40148683
Alignment:
Q  13 aatattgaaataatattta--tatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------ttta 100  Q
    |||||||||||| | ||||  ||||| ||||| |||||||| |||||||| |||| ||| || ||||||| |||||| ||||||||          ||||    
T  40148244 aatattgaaatattttttacatataccgttaacatcattctcaattccgacgagacattgttattccaaatagggacaatgatcttaaaagtacttttta 40148343  T
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacac 200  Q
    ||| |||||||||||  ||||||||| ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||||||    
T  40148344 ttctgaagggacatatattatcgaagggactatgtttt-aagaccattcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaacac 40148442  T
Q  201 tcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggatggagaagagagaaagagttctcgacaactcaata 299  Q
    ||||| |||| ||||||||||||| | |||||| ||||||||  ||||||||||||||| |  ||  | ||  ||||| ||||||| ||||||||||||     
T  40148443 tcttaattccgaagggacagaaaaagaagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagagagttcccgacaactcaat- 40148541  T
Q  300 gaaactctttggtgtg-ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaata 398  Q
    |||||||||| |||||   |||||||| |||  |||||| | | |||||||||||| | ||||||||||||||||||||||| ||  ||||||||||||     
T  40148542 gaaactctttcgtgtgttttttgaactaagtgaagtcctttatttatatagagattctataattgttttagcaaaaattgcgacaacagttactctaatg 40148641  T
Q  399 gataagatcaaaagtgaa-cttattcattaatcagttcaacaa 440  Q
    |||| ||| |||| ||||  |||| ||||||| ||||||||||    
T  40148642 gatatgattaaaa-tgaagtttatccattaataagttcaacaa 40148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 13 - 315
Target Start/End: Complemental strand, 9726501 - 9726187
Alignment:
Q  13 aatattgaaataatattt-atatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttat 101  Q
    |||||||||||||| ||| ||||||  |||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         ||||||    
T  9726501 aatattgaaataattttttatatacctttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttat 9726402  T
Q  102 tccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacact 201  Q
    ||||||||||||||  ||||||||| ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  ||| |||||||||||    
T  9726401 tccgaagggacatatattatcgaagggactatgtttt-aagaccattcttaattctgaagggacattaaaccgaaaagggactacggtcttaagaacact 9726303  T
Q  202 cttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag---ctggatggagaagagagaaagagttctcgacaactcaat 298  Q
    |||| |||| ||||||||||||| |||||||| ||||||||  ||| |||||||||||       |||||||||||||||||||||  |||||| |||||    
T  9726302 cttaattccgaagggacagaaaaaggagatgaagagaagaaagactagtcaacacaagtcaaaaaatggagaagagagaaagagtttccgacaattcaat 9726203  T
Q  299 agaaactctttggtgtg 315  Q
     ||||||||||||||||    
T  9726202 -gaaactctttggtgtg 9726187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 147 - 474
Target Start/End: Complemental strand, 20180760 - 20180430
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataa 245  Q
    |||||||||  ||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| |||||| ||||||  |||||||| || |||||  |    
T  20180760 ttcttaattttgaagggacattaaaccgaacagggactatggtcttaagaacactcttaattccgaagggatagaaaaaaggagatgaagaaaagaaaga 20180661  T
Q  246 ctcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgt 341  Q
    |||||||||||||| |  ||   |||||||||| ||| ||||| |||||||||||| ||||||||||||||||  ||| ||||||||| ||||||||| |    
T  20180660 ctcgtcaacacaagtcaagaaagggagaagagataaacagttcccgacaactcaat-gaaactctttggtgtgatttttgaactgagtggagtcctctat 20180562  T
Q  342 atatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaa 440  Q
     |||||||||||| ||||| ||||||||||||| ||| | ||  |||||||||||| ||||| || |||| ||||  |||| ||||||||||||||||||    
T  20180561 ttatatagagattctgtaactgttttagcaaaagttgagacaacagttactctaatggataatattaaaa-tgaagtttatccattaatcagttcaacaa 20180463  T
Q  441 tacttcaggataagataaaaaataaacaaatcca 474  Q
     ||||  ||||| |||  |||| |||||||||||    
T  20180462 cacttatggataggat-caaaagaaacaaatcca 20180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 26667640 - 26667842
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  26667640 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 26667739  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||| ||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  26667740 atcaaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggaca 26667838  T
Q  220 gaaa 223  Q
    ||||    
T  26667839 gaaa 26667842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 26939237 - 26939439
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  26939237 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 26939336  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||| ||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  26939337 atcaaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggaca 26939435  T
Q  220 gaaa 223  Q
    ||||    
T  26939436 gaaa 26939439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 29167701 - 29167499
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  29167701 tatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 29167602  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||| | ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  29167601 atcgaagggacaatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggaca 29167503  T
Q  220 gaaa 223  Q
    ||||    
T  29167502 gaaa 29167499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 37549880 - 37549678
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  37549880 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 37549781  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||  ||||| ||||  |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||||||||||||    
T  37549780 atcgaatggactatgtttc-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttccaaagggaca 37549682  T
Q  220 gaaa 223  Q
    ||||    
T  37549681 gaaa 37549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 13 - 259
Target Start/End: Complemental strand, 6513660 - 6513405
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    |||||||||| |||||||||||||  ||||||||||||||||||  || | || |||||  ||||||||||||||||||||||         ||||||||    
T  6513660 aatattgaaagaatatttatatacctttaagatcattcttaattatgacgggacattata-ttccaaaagggactatgatcttaatagcactctttattc 6513562  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccg-aatagggacttaggtattaagaacactc 202  Q
    ||||||||| ||  |||||| || ||||| ||||| |||| | ||||||||| |||||||| |||| |||| |||||| | |  ||| |||| |||||||    
T  6513561 cgaagggacttatattatcggagggactatgtttttaagatcattcttaatttcgaagggacattaaaccgaaataggaaatgtggtcttaataacactc 6513462  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag 259  Q
    ||| |||  ||||||||||||| |||||||| || |||||  |||||||||||||||    
T  6513461 ttaattctgaagggacagaaaaaggagatgaagaaaagaaagactcgtcaacacaag 6513405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 37652678 - 37652476
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||| |||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  37652678 tatataccgttaagatcattattaattccgacgggacattgttattccaaatagggactatgatcttaaaagtgctctttattctgaagggacatatatt 37652579  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||  ||||| ||||  |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||||||||||||    
T  37652578 atcgaatggactatgtttc-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttccaaagggaca 37652480  T
Q  220 gaaa 223  Q
    ||||    
T  37652479 gaaa 37652476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 439
Target Start/End: Complemental strand, 15414452 - 15414207
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgac 290  Q
    ||||||||||| |||||||  ||||||||||||| |||||||| ||||||||||||| || ||||||||||||| |||||||||||  ||||||||||||    
T  15414452 ttaagaacacttttacttctgaagggacagaaaaaggagatgaggagaagaataacttgttaacacaagctggagggagaagagag--agagttctcgac 15414355  T
Q  291 aactcaatagaaactctttggtgt-gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagtt 389  Q
    |||| ||||| |||| |||| |||    ||| |||| ||| || |||||| | |||||||||  ||||||| |  |||||| ||||||| ||| | | ||    
T  15414354 aactgaatag-aactttttgatgtaattttttaactaagtggaatcctctatttatatagag-gtttgtaactagtttagctaaaattgtggctgcaatt 15414257  T
Q  390 actctaatagataagatcaaaagtgaacttattcattaatcagttcaaca 439  Q
    |||||||| |||||| ||||||   ||||||  || ||||||||||||||    
T  15414256 actctaatggataagttcaaaatgaaacttaaccactaatcagttcaaca 15414207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 26667943 - 26668106
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  26667943 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 26668042  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  26668043 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 26668106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 26939540 - 26939703
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  26939540 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 26939639  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  26939640 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 26939703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 224
Target Start/End: Original strand, 36429077 - 36429280
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| ||| |||||||||||         |||||||| |||||||||||  ||    
T  36429077 tatataccgttaagatcattcttaattccgacgggacattgttattccaaataggtactatgatcttaaaaatactctttattctgaagggacatatatt 36429176  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||| | ||||| ||||| |||||| |||||||||||||||||| |||| | |||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  36429177 atcgacgagactatgtttt-aagaccattcttaattccgaagggacattaaaacgaaaagggactatggtcttaagaacactcttaattccgaagggaca 36429275  T
Q  220 gaaaa 224  Q
    |||||    
T  36429276 gaaaa 36429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 7452122 - 7452322
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    |||||||||||||||||||||||||||  || | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  7452122 tatatactgttaagatcattcttaattttgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacat---tt 7452218  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| ||||||   ||| ||||||| ||||||| |||| ||||||||    
T  7452219 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggacaatggtcttaagaaaactcttatttccgaagggaca 7452318  T
Q  220 gaaa 223  Q
    ||||    
T  7452319 gaaa 7452322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 6154864 - 6154701
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||||||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  6154864 tttgaactaagttgagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacatcagttactctaatggataagattaaaatggagt 6154765  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    | || |||||||||||| ||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  6154764 tcatccattaatcagtttaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 6154701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 166 - 312
Target Start/End: Original strand, 4872411 - 4872559
Alignment:
Q  166 attataccgaatagggacttaggtattaagaacactcttacttccaaagggacag-aaaatggagatgatgagaagaataactcgtcaacacaag--ctg 262  Q
    |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||| |||| |||||||| ||||||||  |||||||||||||||    |    
T  4872411 attaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaag 4872510  T
Q  263 gatggagaagagagaaagagttctcgacaactcaatagaaactctttggt 312  Q
     | |||||||||||||||||||| |||||||||||| |||||||||||||    
T  4872511 aagggagaagagagaaagagttcccgacaactcaat-gaaactctttggt 4872559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 36424303 - 36424466
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa- 416  Q
    |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| |||| ||||     
T  36424303 tttgaactaagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaa-tgaag 36424401  T
Q  417 cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
     |||| |||||||||||||||||| ||||  | ||| |||  |||| ||||||||||| |||||||    
T  36424402 tttatccattaatcagttcaacaacacttgtgaataggat-gaaaagaaacaaatccacaaaagtg 36424466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 482
Target Start/End: Complemental strand, 29167404 - 29167241
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| ||||||||  | |||||||||||| ||||| ||||||||||||||||||||||  |||||||||||| |||||||| ||||  ||      
T  29167404 tttgaactaagtggagtcctcgatttatatagagattctgtaactgttttagcaaaaattgcggcaacagttactctaatggataagattaaaatggagt 29167305  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||| ||||||||||||| ||||  |||| |||   |||| ||||||||||| |||||||    
T  29167304 ttatccattgatcagttcaacaacacttgtggat-agaatcaaaagaaacaaatccacaaaagtg 29167241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 95 - 223
Target Start/End: Original strand, 36424080 - 36424207
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    ||||||||| |||||||||||  ||||||||| || || ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||    
T  36424080 tctttattctgaagggacatatattatcgaagagattatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaa 36424178  T
Q  195 gaacactcttacttccaaagggacagaaa 223  Q
    ||||| ||||| |||| ||||||||||||    
T  36424179 gaacagtcttaattccgaagggacagaaa 36424207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 7452418 - 7452581
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||  ||||||||| | |||||||||||| ||||  ||||||||||||||||||| ||  |||||||||||| ||||| || ||||  ||      
T  7452418 tttgaactaagcggagtcctctatttatatagagattctgtatctgttttagcaaaaattgcgacaacagttactctaatggataaaattaaaatggagt 7452517  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  7452518 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 7452581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 480
Target Start/End: Complemental strand, 6512098 - 6511906
Alignment:
Q  287 cgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagt 385  Q
    |||||||||||| ||||||||||| ||||  ||| ||||||||| ||||||||| | |||||||||||| || || |||||||||||||| |||| ||      
T  6512098 cgacaactcaat-gaaactctttgatgtgttttttgaactgagtggagtcctctatttatatagagattctgcaactgttttagcaaaaaatgcgacaac 6512000  T
Q  386 agttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaag 480  Q
    ||||| |||||| |||||||| |||| ||||  |||| |||||||||||| ||||| ||||  ||||| |||  |||| ||||||||||| |||||    
T  6511999 agttaatctaatggataagattaaaa-tgaagtttatccattaatcagtttaacaacacttgtggataggat-caaaagaaacaaatccacaaaag 6511906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 315
Target Start/End: Complemental strand, 35679520 - 35679322
Alignment:
Q  121 tcgaagtgactacgttttgaagacctttcttaatt---ccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    |||||| ||||| ||||| |||||| |||||||||   | ||||||| |||| |||||| |||||||  ||| || |||||||||||| |||| ||||||    
T  35679520 tcgaagggactatgtttttaagaccattcttaattattctgaagggacattaaaccgaaaagggactatggtctttagaacactcttaattccgaaggga 35679421  T
Q  218 cagaaaatggagatgatgagaagaataactcgtcaacacaag-ctgga--tggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
     |||||| |||||||| || |||||  ||||||||| ||||| |  ||   |||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  35679420 tagaaaaaggagatgaagaaaagaa-gactcgtcaatacaagtcaagaaggggagaagaaagaaagagttcccgacaactcaat-gaaactctttggtgt 35679323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 37537356 - 37537206
Alignment:
Q  331 gagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatc 430  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  ||||||||||||  ||||||| ||||  ||  ||||  |||||||    
T  37537356 gagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatgaataagattaaaatggagtttatctattaatc 37537257  T
Q  431 agttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  37537256 agttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 37646475 - 37646325
Alignment:
Q  331 gagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatc 430  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||||||| | ||  |||||||||||| |||||||| ||||  ||  ||||  |||||||    
T  37646475 gagtcctctatttatatagagattctgtaactgttttagcaaaaattgtgacaacagttactctaatggataagattaaaatggagtttatctattaatc 37646376  T
Q  431 agttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  37646375 agttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 37646325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 321 - 482
Target Start/End: Original strand, 17162511 - 17162673
Alignment:
Q  321 gaactgagttgagtcctctgtatatatagagattttgtaattgt-tttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactt 419  Q
    |||||||||  ||| |||| | |||||||||| ||||||| ||  |||||| ||||||||||||  | |||||||| | || ||| |||||||  |||||    
T  17162511 gaactgagtacagttctctatttatatagagactttgtaactgaatttagctaaaattgcggcaacaattactctagtggaaaagttcaaaaggaaactt 17162610  T
Q  420 attcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    | |||||||||||||||||||  |||  ||||||||| ||||||||||||| ||| |||||||    
T  17162611 actcattaatcagttcaacaactcttgtggataagattaaaaataaacaaacccaaaaaagtg 17162673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 557135 - 557240
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||| ||| ||||| ||| | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  557135 ttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 557234  T
Q  218 cagaaa 223  Q
    ||||||    
T  557235 cagaaa 557240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 561907 - 562012
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||| ||| ||||| ||| | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  561907 ttatcaaagggactatgttcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 562006  T
Q  218 cagaaa 223  Q
    ||||||    
T  562007 cagaaa 562012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 36941920 - 36941815
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  | | ||||||||||||||| |||| ||||||    
T  36941920 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatgatcttaagaacactcttaattccgaaggga 36941821  T
Q  218 cagaaa 223  Q
    ||||||    
T  36941820 cagaaa 36941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 15414600 - 15414531
Alignment:
Q  27 atttatatactgttaagatcattcttaattccgatgagatattattgttcc-aaaagggactatgatctt 95  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||| |||| |||||| |||||||||||    
T  15414600 atttatatactgttaagatcattcttgattccgacgagacattattattccaaaaaggaactatgatctt 15414531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 36937166 - 36937061
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||  ||||||| |||| ||||||    
T  36937166 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagattactcttaattccgaaggga 36937067  T
Q  218 cagaaa 223  Q
    ||||||    
T  36937066 cagaaa 36937061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 1429712 - 1429626
Alignment:
Q  226 ggagatgatgagaagaataactcgtcaacacaagctggatggagaaga--gagaaagagttctcgacaactcaatagaaactctttgg 311  Q
    |||||||| |||| ||||| ||||| ||||||||||||| ||||||||  ||||||||||| |||||||||| |||| ||||||||||    
T  1429712 ggagatgaagagaggaatagctcgttaacacaagctggagggagaagagagagaaagagttatcgacaactcgatag-aactctttgg 1429626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 23688535 - 23688700
Alignment:
Q  95 tctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaa 194  Q
    |||||||||||||||||||||  | ||||||  || || | | | |||||| |||||||||||| | ||| ||||||||||| |||  ||  ||| ||||    
T  23688535 tctttattccgaagggacatatatcatcgaaaggaatatgctcttaagaccattcttaattccggacggacattataccgaaaaggttctatggtcttaa 23688634  T
Q  195 gaacactcttacttccaaagggaca-gaaaatggagatgatgagaagaataactcgtcaacacaag 259  Q
    |||| |||||| || | ||||||||  |||| |||||||| ||||||||  ||| |||||||||||    
T  23688635 gaactctcttaatttcgaagggacataaaaaaggagatgaagagaagaaacacttgtcaacacaag 23688700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 2860003 - 2859944
Alignment:
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaata 299  Q
    |||||||| || |||||||| |||| |||||||||||||| |||| ||||||||||||||    
T  2860003 gaataacttgttaacacaagttggagggagaagagagaaaaagttttcgacaactcaata 2859944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 35679603 - 35679540
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttcc-aaaagggactatgat 92  Q
    ||||||| ||||||||||||||||||||||| | || |||||| |||| |||||||||||||||    
T  35679603 tatataccgttaagatcattcttaattccgacgcgacattattattccaaaaagggactatgat 35679540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 2848160 - 2848104
Alignment:
Q  240 gaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactca 296  Q
    |||||||| || |||||||| |||| |||||||||||||| |||| |||||||||||    
T  2848160 gaataacttgttaacacaagttggagggagaagagagaaaaagttttcgacaactca 2848104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 13301124 - 13301041
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||| |||||| ||||||| ||||| || |||||  | |||||  ||| ||||||||||||||| |||| ||||||||||||    
T  13301124 aagaccattcttatttccgaaaggataataaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 13301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 20180795 - 20180752
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaatt 56  Q
    |||||||||  ||||||||||||| |||||||||||||||||||    
T  20180795 aatattgaatgaatatttatataccgttaagatcattcttaatt 20180752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 470
Target Start/End: Original strand, 17159087 - 17159185
Alignment:
Q  372 aaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaa 470  Q
    ||||||||||||  | |||||||| | || |||| ||||||  ||||||  |||||||||| |||||||  ||||  |||||||||||||| |||||||    
T  17159087 aaaattgcggcaacaattactctagtggaaaagaccaaaaggaaacttacccattaatcagctcaacaactcttctagataagataaaaaagaaacaaa 17159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 13290793 - 13290745
Alignment:
Q  266 ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||||||||| || | |||||||||| ||||||||||||||    
T  13290793 ggagaagagagaaagagttatctataactcaatag-aactctttggtgtg 13290745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 16115969 - 16115936
Alignment:
Q  24 aatatttatatactgttaagatcattcttaattc 57  Q
    |||||| |||||||||||||||||||||||||||    
T  16115969 aatattaatatactgttaagatcattcttaattc 16115936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 17162384 - 17162427
Alignment:
Q  270 aagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    |||||||||| | |||||||||||||||||| |||||||||||||    
T  17162384 aagagagaaataattctcgacaactcaatag-aactctttggtgt 17162427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 4e-73; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 23665851 - 23665389
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||| ||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  23665851 tatataccgtttagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtattctttattctgaagggacat---tt 23665755  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| ||| || || ||||  ||| |||||||||||||||  ||| ||||||||    
T  23665754 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccaaaaagcgactatggtcttaagaacactcttaaatccgaagggaca 23665655  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    ||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||     
T  23665654 gaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgt 23665556  T
Q  317 gttt--gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
     |||  ||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| ||||  |    
T  23665555 ttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaatgg 23665456  T
Q  415 aacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |  |||| |||||||||||||||||| ||||  |||| |||   |||| ||||||||||| |||||||    
T  23665455 agtttatccattaatcagttcaacaacacttatggat-agaatcaaaagaaacaaatccacaaaagtg 23665389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 13 - 312
Target Start/End: Original strand, 11399712 - 11400020
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatcttc---------tttattc 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||          ||||||     
T  11399712 aatattgaaacaatatttatatactgttaagatcattcttaatttcgatcagacattattgttccaaaagggactatgatcttaaaactacgttttatta 11399811  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
    |||| |||||||| ||||||||| || || | ||| || ||||||||||||| |||||||| |||||||||||||| | |  |||| || |||||||| |    
T  11399812 cgaatggacatacattatcgaagagattatgcttttaatacctttcttaatttcgaagggacattataccgaatagcgtcaaaggtctttagaacacttt 11399911  T
Q  204 tacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaa 303  Q
    || |||  ||||||| |||||  |||| ||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11399912 tatttctgaagggacggaaaaatgagaagagaagaagaatagctcgtcaactcaagctggagggagaagagagaaagagttctcgacaactcgatagaaa 11400011  T
Q  304 ctctttggt 312  Q
    |||||||||    
T  11400012 ctctttggt 11400020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 30 - 481
Target Start/End: Original strand, 55326142 - 55326604
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  55326142 tatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 55326241  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| || || ||||| |||||| |||||||||||||||| | |||  |||||| || ||||  ||| ||||||||||||||| |||| ||||||||    
T  55326242 atcgaagggattatgtttt-aagaccattcttaattccgaagg-acattcaaccgaaaagcgactatggtcttaagaacactcttaattccgaagggaca 55326339  T
Q  220 gaaaat--ggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    |||||   | |||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  55326340 gaaaaaaagaagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaaatctttggtgt 55326438  T
Q  315 gggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
    |  |||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  |    
T  55326439 gtttttgaacttagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatgg 55326538  T
Q  415 aacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagt 481  Q
    |  |||| ||||||| |||||||||| ||||  ||||| |||  |||| ||||||||||| ||||||    
T  55326539 agtttatccattaataagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagt 55326604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 758096 - 757630
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||| ||| | || ||| || ||||||| |||||||||||||||         ||||| || |||||||||||  ||    
T  758096 tatataccgttaagatcattcttaatttcgacgggacattgttcttccaaatagggactatgatcttaaaagtactctttaatctgaagggacatatatt 757997  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaagggac 218  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| | ||||||  ||| |||||||||||||||  ||| |||||||    
T  757996 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaagggac 757897  T
Q  219 agaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  757896 agaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagaattcccgacaactcaat-gaaactctttggtgtg 757798  T
Q  316 -ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
       ||||| |||||| |||| |||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  |    
T  757797 ttttttgagctgagtggagttctctatttatatagagattatgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatgg 757698  T
Q  415 a-acttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |   |||| |||||||||||||||||| ||||  |||||  ||  |||| ||||||||||| |||||||    
T  757697 agttttatccattaatcagttcaacaacacttgtggatagtat-caaaagaaacaaatccacaaaagtg 757630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 30 - 380
Target Start/End: Complemental strand, 23661192 - 23660831
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  23661192 tatataccgttaagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtattctttattctgaagggacat---tt 23661096  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| |||||||||||||||  ||| |||||||     
T  23661095 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggacg 23660996  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg- 315  Q
    ||||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||||||| |||||||||||| ||||||||||||||||     
T  23660995 gaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgt 23660897  T
Q  316 -ggtttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcg 380  Q
       |||||||||||| ||||||||| | |||||||||||| ||||| |||||||||||||||||||    
T  23660896 ttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcg 23660831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 7570946 - 7570482
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| | |||||||||||||         ||||||||  || ||||||   ||    
T  7570946 tatatactgttaagatcattcttaattccgacgggacattgttcttccaaatatggactatgatcttaaaagtactctttattctaaatggacat---tt 7570850  T
Q  120 atcgaa-gtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttacttccaaaggga 217  Q
    |||||| | ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| | ||||||  ||| |||||||||||||||  ||| ||||||    
T  7570849 atcgaaagggactatgtttttaagaccattcttaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacactcttaaatccgaaggga 7570750  T
Q  218 cagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt 314  Q
    ||||||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| |||||||||||||||    
T  7570749 cagaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgt 7570651  T
Q  315 gggttt--gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaag 412  Q
    |  |||  ||||||||| ||||||||| | |||||||||||| ||||| |||||||||||||| |||| ||  | |||||||||| |||||||| ||||     
T  7570650 gtttttttgaactgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaactgcgacaacaattactctaatggataagattaaaa- 7570552  T
Q  413 tgaa-cttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  7570551 tgaagtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 7570482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 439
Target Start/End: Original strand, 46964358 - 46964798
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttatt 102  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| | || |||  | ||||||| |   | |||||||||         |||||||    
T  46964358 aatattgaaataatttttatatactgttaagatcattcttaattccgacgggacattgctattccaaatataaattatgatcttaaaagtactctttatt 46964457  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacact 201  Q
    | |||||||||||  ||||||||| ||||| ||||| |||||| ||||||||||  |||||| |||| |||||| | ||||||  ||| |||||||||||    
T  46964458 ctgaagggacatatattatcgaagagactatgtttttaagaccattcttaattctaaagggacattaaaccgaaaaagggactatggtcttaagaacact 46964557  T
Q  202 cttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaat 298  Q
    |||| |||| ||| || |||||| |||||||| ||||||||  ||||||||||||||  |  ||   |||||||||||||||||||| ||||||||||||    
T  46964558 cttaattccgaagtgatagaaaaaggagatgaagagaagaaagactcgtcaacacaaatcaagaaagggagaagagagaaagagttcccgacaactcaat 46964657  T
Q  299 agaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaat 397  Q
     ||||||||||||||||  ||| ||||||||| ||||||||| | ||||||||||||  |||| | |||||| |||||||||| ||  ||||||||||||    
T  46964658 -gaaactctttggtgtgatttttgaactgagtggagtcctctatttatatagagattcagtaactattttagtaaaaattgcgacaacagttactctaat 46964756  T
Q  398 agataagatcaaaagtgaacttattcattaatcagttcaaca 439  Q
     |||||||| ||||  ||  |||| ||||||||| |||||||    
T  46964757 ggataagattaaaatggagtttatccattaatcaattcaaca 46964798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 30 - 482
Target Start/End: Original strand, 27709298 - 27709759
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| || ||||||||||||         |||||||| ||||||||||   ||    
T  27709298 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagagactatgatcttaaaaatactctttattctgaagggacat---tt 27709394  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| ||||||||||||||| || |||| ||| || ||| |||  ||| ||||||||||||||| || | ||||||||    
T  27709395 atcgaagggactatgtttttaagaccattcttaattccgaagagacattaaaccaaaaaggaactatggtcttaagaacactcttaatttcgaagggaca 27709494  T
Q  220 gaaaatgg-agatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    |||||  | |||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  27709495 gaaaaaagtagatgaagagaagaaagactcgtcaacacaagtcaagaaaaggagaagagagaaagagtttccgacaactcaat-gaaactctttggtgtg 27709593  T
Q  316 gg-tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
       ||| |||||||| ||||| ||| | |||||||||||| ||||| ||||||||||||||||||| ||  ||| |||||||| |||||||| ||||  |    
T  27709594 ttctttaaactgagtggagtc-tctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagtaactctaatggataagattaaaatgg 27709692  T
Q  415 aacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |  |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  27709693 agtttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 27709759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 140 - 461
Target Start/End: Complemental strand, 12965498 - 12965175
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| ||||||||| |||||||| |||| |||||| ||||| |  ||| || |||||| ||||| |||| ||||||||||||  |||||||| |||||    
T  12965498 aagaccattcttaatttcgaagggacattaaaccgaaaagggagtatggtcttcagaacattcttaattccgaagggacagaaataggagatgaagagaa 12965399  T
Q  240 gaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgt-gggtttgaactgagttgagtc 335  Q
    |||  | | ||||||||||| |  ||   |||||||||||||||||||| ||||||||||||| ||||||||| ||||    |||||||||||| |||||    
T  12965398 gaaagaattgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaata-aaactcttttgtgtaatttttgaactgagtggagtc 12965300  T
Q  336 ctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttc 435  Q
     | | | |||||||||||||||||| ||||||| ||||||||||||||  |||||||||||| |||||||||||||| |||||||| |||||| ||||||    
T  12965299 ttttatttatatagagattttgtaactgttttaacaaaaattgcggca-cagttactctaatggataagatcaaaagagaacttatccattaaccagttc 12965201  T
Q  436 aacaatacttcaggataagataaaaa 461  Q
    ||||| ||||  ||||||||| ||||    
T  12965200 aacaacacttgtggataagatcaaaa 12965175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 13 - 440
Target Start/End: Original strand, 3419353 - 3419776
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatcttctttattccgaaggga 111  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | || |||||| ||| |||| ||||||||||||||  | || |            
T  3419353 aatattgaaagaatatttatatactgttaagatcattcttaattccgacgggacattattattctaaaaagggactatgatcttaataatact------- 3419445  T
Q  112 catacgttat--cgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacactcttactt 208  Q
        | ||||  ||||  ||||| ||||| |||||| |||||||||||||||| | |||| |||||| | ||||||  ||| |||||||||| |||| ||    
T  3419446 ----ctttattccgaaaggactatgtttttaagaccattcttaattccgaaggaacattaaaccgaaaaagggactatggtcttaagaacacccttaatt 3419541  T
Q  209 ccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaact 305  Q
    || |||||||| |||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||| | ||||||    
T  3419542 ccgaagggacataaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcagt-gaaact 3419640  T
Q  306 ctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataag 404  Q
    ||||||||||  ||| ||||||||| ||||||||| | |||||||||||| | ||| | ||||||||||||||||| ||  ||||||||||||  |||||    
T  3419641 ctttggtgtgttttttgaactgagtggagtcctctatttatatagagattctctaactattttagcaaaaattgcgacaacagttactctaatgaataag 3419740  T
Q  405 atcaaaagtgaacttattcattaatcagttcaacaa 440  Q
    || ||||  ||  |||| ||||||||||||| ||||    
T  3419741 attaaaatggattttatccattaatcagttcgacaa 3419776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 147 - 480
Target Start/End: Original strand, 20520447 - 20520783
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataa 245  Q
    |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| |||||||| ||||  |||||||| ||||||||  |    
T  20520447 ttcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacaaaaaaaaggagatgaagagaagaaaga 20520546  T
Q  246 ctcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggtttg-aactgagttgagtcctctgt 341  Q
    |||||||||||||| |  ||   |||||||||||||||||||  || ||||||||| |||||||||||||||   |||| |||||||| ||||||||| |    
T  20520547 ctcgtcaacacaagtcaagaaagggagaagagagaaagagtttccgccaactcaat-gaaactctttggtgtaattttggaactgagtggagtcctctat 20520645  T
Q  342 atatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaat 441  Q
     ||||| ||||||||||||  |||||||||||||||||| ||  || ||||||||| |||||||| ||||  ||  |||| ||||||||||||||||||     
T  20520646 ttatatcgagattttgtaaccgttttagcaaaaattgcgacaacagatactctaatggataagattaaaatggagtttatccattaatcagttcaacaac 20520745  T
Q  442 acttcaggataagataaaaaataaacaaatccataaaag 480  Q
    ||||  ||||| |||  |||| ||||||||||| |||||    
T  20520746 acttgtggataggat-caaaagaaacaaatccacaaaag 20520783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 30 - 315
Target Start/End: Complemental strand, 24038099 - 24037805
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||| ||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||||||||   ||    
T  24038099 tatataccgtttagatcattcttaattccgacgggacattgttcttccaaatagggactatgatcttaaaagtattctttattctgaagggacat---tt 24038003  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| || ||||  ||| |||||||||||||||  ||| ||||||||    
T  24038002 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagcgactatggtcttaagaacactcttaaatccgaagggaca 24037903  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctgg--atggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||| |||||||| ||||||||  ||||||||||||||| |  |  | |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24037902 gaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtg 24037805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 140 - 315
Target Start/End: Complemental strand, 35456572 - 35456396
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca--gaaaatggagatgatgag 237  Q
    |||||| |||||||||||||||||| ||||||||||||||| | | |||| |||||||||||| || |||| ||||||||  |||||  ||||||| | |    
T  35456572 aagaccattcttaattccgaagggacattataccgaataggaattaaggtcttaagaacactcataattccgaagggacaaagaaaaaagagatgaggtg 35456473  T
Q  238 aagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  35456472 aagaataactcgttaacacaagctggagggagaagagagaaagagttatcgacaactcaata-aaactatttggtgtg 35456396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 294
Target Start/End: Complemental strand, 25726522 - 25726231
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaag-ggactatgatct---------tctttatt 102  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||| |  |  ||||| || |||||  ||||||||||||         ||||||||    
T  25726522 aatattgaaagaatatttatataatattaagatcattcttaattccgacggaacgttattatttcaaaattggactatgatctgataagtactctttatt 25726423  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
     | ||||||||||  ||||||||| ||||| ||| | ||||| |||||||| | |||||||| ||||| | ||||| ||| | |||| ||||||||| ||    
T  25726422 tcaaagggacatatattatcgaagggactatgttcttaagacatttcttaacttcgaagggacattatgctgaataaggattaaggtcttaagaacattc 25726323  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaact 294  Q
    ||| || | ||||||||||||| |||||||| ||||||||||| |||| ||||||||| | |  ||||||||||||||||||||||||||||    
T  25726322 ttaatttcgaagggacagaaaaaggagatgaagagaagaataattcgttaacacaagccgaaatgagaagagagaaagagttctcgacaact 25726231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 97 - 302
Target Start/End: Complemental strand, 10708355 - 10708150
Alignment:
Q  97 tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaaga 196  Q
    ||||||||||| |||||||  ||||||||| | ||| ||||| || |||||| |||||||| |||||| ||||||||||| ||  ||| |||| |||| |    
T  10708355 tttattccgaatggacatatattatcgaaggggctatgtttttaaaaccttttttaattccaaagggacattataccgaacagaaactaaggtcttaaaa 10708256  T
Q  197 acactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactca 296  Q
    ||||||||| |||| || ||||| |||| ||||||||  |||||||||  ||||||| ||||| |||| |||||||||||||||||||||| ||||||||    
T  10708255 acactcttatttccgaaaggacataaaaaggagatgagaagaagaatagttcgtcaagacaagatggagggagaagagagaaagagttctctacaactca 10708156  T
Q  297 atagaa 302  Q
    ||||||    
T  10708155 atagaa 10708150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 17025756 - 17025553
Alignment:
Q  97 tttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaaga 196  Q
    ||||||| |||||||||||  |||||||||  |||| ||| | |||| ||||||||||| |||||||||| ||||||||| | ||||  |||| ||||||    
T  17025756 tttattctgaagggacatatattatcgaaggaactatgttcttaagaactttcttaatttcgaagggataatataccgaacatggacgaaggtcttaaga 17025657  T
Q  197 acactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactca 296  Q
    |||||||||  ||  |||||| ||||||  ||||||  |||||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||| |||    
T  17025656 acactcttaaatctgaagggaaagaaaaaagagatggggagaagaataactcgttaacacaagccggagggataagagggaaagagttctcgacaattca 17025557  T
Q  297 atag 300  Q
    ||||    
T  17025556 atag 17025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 12112025 - 12111874
Alignment:
Q  331 gagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatc 430  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||||||  | |||||||||| |||||||| ||||  |||||||| ||||||||    
T  12112025 gagtcctctatttatatagagattttgtaactgttttagcaaaaattgcggcaacaattactctaatggataagattaaaaaggaacttatccattaatc 12111926  T
Q  431 agttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||||||||| ||||   |||| ||| ||||| ||||||||||| |||||||    
T  12111925 agttcaacaacacttgtagataggatcaaaaagaaacaaatccacaaaagtg 12111874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 315
Target Start/End: Original strand, 29350680 - 29350902
Alignment:
Q  94 ttctttattccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtatta 193  Q
    |||||||||| |||||||||||  ||||||||| ||||| ||||| |||||| || |||||||| |||||| |||| |||||| |||||||  | | |||    
T  29350680 ttctttattctgaagggacatatattatcgaagggactatgtttt-aagaccattattaattccaaagggacattaaaccgaaaagggactatgatctta 29350778  T
Q  194 agaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag---ctggatggagaagagagaaagagttctcgac 290  Q
    |||||||||||| || | ||||||| |||||  ||||||| ||||||||  |||||||||||||||    |  | | |||||||||||||||||| ||||    
T  29350779 agaacactcttaatttcgaagggacggaaaaatgagatgaagagaagaaagactcgtcaacacaagtcaataaaggaagaagagagaaagagttcccgac 29350878  T
Q  291 aactcaatagaaactctttggtgtg 315  Q
    |||||||| ||||||||||||||||    
T  29350879 aactcaat-gaaactctttggtgtg 29350902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 18467591 - 18467793
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| |||||||||||  ||    
T  18467591 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagggacatatatt 18467690  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  | | ||||||||||||||| |||| ||||||||    
T  18467691 atcgaagggactatgtttt-aagaccattcttaattccgaagggacattaaaccgaaaagggactatgatcttaagaacactcttatttccgaagggaca 18467789  T
Q  220 gaaa 223  Q
    ||||    
T  18467790 gaaa 18467793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 14438426 - 14438226
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||||||||||||||||||||||||||| | || ||| || ||||||| |||||||||||||||         |||||||| ||||| ||||   ||    
T  14438426 tatatactgttaagatcattcttaattccgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaaggaacat---tt 14438330  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||| ||||||| |||| ||||||||    
T  14438329 atcgaagggactatgtttttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaatactcttatttccgaagggaca 14438230  T
Q  220 gaaa 223  Q
    ||||    
T  14438229 gaaa 14438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 12112412 - 12112118
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttatt 102  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |   || |||||| || |||| ||||| |||||||||          ||||||    
T  12112412 aatattaaaataatatttatataccgttaagatcattcttaatttccacatgacattattatttcaaatagggagtatgatcttaaaagtattatttatt 12112313  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactc 202  Q
     |||||||||||| |||||||||| ||||| ||||| || |  ||||||||||| ||||||| ||||| ||||||||||| | |||| ||| ||| ||||    
T  12112312 tcgaagggacatatgttatcgaagagactatgtttttaaca--tttcttaattctgaagggacattattccgaatagggattaaggtcttacgaatactc 12112215  T
Q  203 ttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag--ctggatggagaagagagaaagagttctcgacaactcaa 297  Q
    ||| ||   ||||| | ||||| ||| |||| ||||| |||| ||||| ||||||||   |  |||| |||||||||||||||||||||||||||||    
T  12112214 ttatttttgaaggggcggaaaaaggaaatgaggagaataatagctcgtgaacacaagttatatatggtgaagagagaaagagttctcgacaactcaa 12112118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 312
Target Start/End: Complemental strand, 3656974 - 3656666
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaa-gggactatgatctt---------ctttatt 102  Q
    |||||| |||||||||||||||||  |||||||| ||||||||||||| | || |||||| |||||||| |||| |||||||||         |||||||    
T  3656974 aatattcaaataatatttatatacctttaagatcgttcttaattccgacgggacattattattccaaaaagggattatgatcttaacagtactctttatt 3656875  T
Q  103 ccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaata-gggacttaggtattaagaacact 201  Q
     ||||||||| ||  ||||||||| ||||| |||    ||||| |||| |||| |||||||| |||| |||||| | ||||||  ||| |||||||||||    
T  3656874 acgaagggacttatattatcgaagggactatgtt----agaccattctgaatttcgaagggacattaaaccgaaaaagggactatggtcttaagaacact 3656779  T
Q  202 cttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag--ctg-gatggagaagagagaaagagttctcgacaactcaat 298  Q
    |||| |||| |||||||| |||| |||||||| ||||||||  || | ||||||||||  | |  | |||||||||||||||||||  ||| |||| |||    
T  3656778 cttaattccgaagggacaaaaaaaggagatgaagagaagaaagacccatcaacacaagtccagaaagggagaagagagaaagagtttccgataactgaat 3656679  T
Q  299 agaaactctttggt 312  Q
     |||||||||||||    
T  3656678 -gaaactctttggt 3656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 18467877 - 18468040
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| || |||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  18467877 tttgaactaagtggaatcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 18467976  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  18467977 ttatccattaatcagttcaacaacacttgcggatatgat-caaaagaaacaaatccacaaaagtg 18468040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 364 - 482
Target Start/End: Complemental strand, 12971199 - 12971082
Alignment:
Q  364 ttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaacttattcattaatcagttcaacaatacttcaggataagataaaaaat 463  Q
    ||||||||||||||||||||  |||||||||||| |||||||| ||||| |||||||| |||||||||||||||||| ||||  ||||| |||  ||||     
T  12971199 ttttagcaaaaattgcggcaacagttactctaattgataagataaaaagagaacttatccattaatcagttcaacaacacttgtggataggat-caaaag 12971101  T
Q  464 aaacaaatccataaaagtg 482  Q
    ||||||||||| |||||||    
T  12971100 aaacaaatccacaaaagtg 12971082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 318 - 480
Target Start/End: Complemental strand, 14438130 - 14437969
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| |||  |||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  14438130 tttgaactaagtgaagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 14438031  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaag 480  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||    
T  14438030 ttatccattaatcagttcaacaaaacttgtggataggat-caaaagaaacaaatccacaaaag 14437969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 482
Target Start/End: Original strand, 18472671 - 18472834
Alignment:
Q  318 tttgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaac 417  Q
    |||||||| ||| || |||||| | |||||| |||||  |||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  ||      
T  18472671 tttgaactaagtggaatcctctatttatatatagattcggtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatggagt 18472770  T
Q  418 ttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |||| |||||||||||||||||| ||||  ||||| |||  |||| ||||||||||| |||||||    
T  18472771 ttatccattaatcagttcaacaacacttgtggataggat-caaaagaaacaaatccacaaaagtg 18472834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 32473452 - 32473332
Alignment:
Q  320 tgaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactt 419  Q
    |||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  | |||||||||| |||||||| ||||  ||  ||    
T  32473452 tgaacttagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacaattactctaatggataagattaaaatggagttt 32473353  T
Q  420 attcattaatcagttcaacaa 440  Q
    || ||||||||||||||||||    
T  32473352 atccattaatcagttcaacaa 32473332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 223
Target Start/End: Original strand, 18472373 - 18472575
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||| ||| | || ||| || ||||||| ||||||||| |||||         ||||||||  ||||||||||  ||    
T  18472373 tatataccgttaagatcattcttaatttcgacgggacattgttattccaaatagggactatcatcttaaaagtactctttattctaaagggacatatatt 18472472  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| |||||||||| ||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||  |||||| |    
T  18472473 atcgaagggactatgtttt-aagaccattcttaattctgaagggacattaaaccgaaaagggactatggtcttaagaacactcttatttctgaagggata 18472571  T
Q  220 gaaa 223  Q
    ||||    
T  18472572 gaaa 18472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 3034082 - 3034187
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  3034082 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 3034181  T
Q  218 cagaaa 223  Q
    ||||||    
T  3034182 cagaaa 3034187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 8070117 - 8070222
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  8070117 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 8070216  T
Q  218 cagaaa 223  Q
    ||||||    
T  8070217 cagaaa 8070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 28125688 - 28125745
Alignment:
Q  235 gagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaa 292  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  28125688 gagaagaataactcgttaacacaagctggagggagaagagagaaagagttctcgacaa 28125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 39775456 - 39775258
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatcttc---------tttattccgaagggacatacgtt 119  Q
    ||||||| ||||||||||||||||||||||| | || ||| || ||||||| || ||||||||||||          ||||||| |||||||||||  ||    
T  39775456 tatataccgttaagatcattcttaattccgacgggacattgttattccaaatagagactatgatcttaaaagtactatttattctgaagggacatatatt 39775357  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    |||| |  ||||| ||||| |||||| |||||||||||||||||| |||| ||| || |||||||  ||| |||| |||||||||| |||| ||||||||    
T  39775356 atcgcaaggactatgtttt-aagaccattcttaattccgaagggacattaaacccaaaagggactatggtcttaataacactcttaattccgaagggaca 39775258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 3693057 - 3693159
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  3693057 ttatcgaagggactatgctgttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 3693156  T
Q  218 cag 220  Q
    |||    
T  3693157 cag 3693159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 445
Target Start/End: Original strand, 55431865 - 55432021
Alignment:
Q  289 acaactcaatagaaactctttggtgtgggtttgaact-gagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtag 387  Q
    |||||||||| |||||||||||||||   ||| || | |||| ||||||||| | |||||||||||| ||||| ||||||| ||||||||||| ||  ||    
T  55431865 acaactcaat-gaaactctttggtgtattttttaaattgagtggagtcctctatttatatagagattctgtaactgttttaacaaaaattgcgacaacag 55431963  T
Q  388 ttactctaatagataagatcaaaagtgaa-cttattcattaatcagttcaacaatactt 445  Q
    |||||||||| |||||||| |||| ||||  ||||  ||||||||||||||||| ||||    
T  55431964 ttactctaatggataagattaaaa-tgaagtttatcaattaatcagttcaacaacactt 55432021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 8888369 - 8888474
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||  ||||||    
T  8888369 ttatcgaagggactatgctcttaagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattctgaaggga 8888468  T
Q  218 cagaaa 223  Q
    ||||||    
T  8888469 cagaaa 8888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 3673047 - 3673126
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    |||||| |||||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||    
T  3673047 aagaccattcttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggaca 3673126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 8883631 - 8883714
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||| || ||||||||||||||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||||||||    
T  8883631 aagaccatttttaattccgaagggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacagaaa 8883714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 315
Target Start/End: Complemental strand, 2207359 - 2207233
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctc 287  Q
    |||||| || ||||| || | ||||||||  ||| |||||||| ||||||||  ||||||||||||||| |  ||   |||||||||||||||||||  |    
T  2207359 ttaagaccattcttaatttcgaagggacattaaacggagatgaagagaagaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagtttcc 2207260  T
Q  288 gacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||| ||||||||||||||||    
T  2207259 gacaactcaat-gaaactctttggtgtg 2207233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 20520412 - 20520459
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccga 60  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||    
T  20520412 aatattgaaagaatatttatattccgttaagatcattcttaattccga 20520459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 55431783 - 55431865
Alignment:
Q  157 cgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgagaa 239  Q
    |||||| | |||| |||||| |||||||  ||| ||||||||||||||| |||| |||||||| |||| |||||||| |||||    
T  55431783 cgaaggtacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaagggacataaaaaggagatgaagagaa 55431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 48432007 - 48431883
Alignment:
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattat--accgaatagggacttaggtattaagaac 198  Q
    ||||||||||||| |  ||||||||| ||||| ||| | |||||| ||||||||| |||||||| |||||  |||||||  |||||  || |||||||||    
T  48432007 ttccgaagggacaaaatttatcgaagggactatgttcttaagaccattcttaatttcgaagggacattataaaccgaat--ggactatggcattaagaac 48431910  T
Q  199 actc-ttacttccaaagggacagaaaa 224  Q
    |||| |||  ||| |||||||||||||    
T  48431909 actctttaaatccgaagggacagaaaa 48431883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 45904179 - 45904096
Alignment:
Q  140 aagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaa 223  Q
    |||||| |||||| ||||||| ||||| || |||||  | |||||  ||| ||||||||||||||| |||| ||||||||||||    
T  45904179 aagaccattcttatttccgaaaggatagtaaaccgacgatggactatggtcttaagaacactcttaattccgaagggacagaaa 45904096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 55431681 - 55431711
Alignment:
Q  30 tatatactgttaagatcattcttaattccga 60  Q
    |||||||||||||||||||||||||||||||    
T  55431681 tatatactgttaagatcattcttaattccga 55431711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 47540708 - 47540644
Alignment:
Q  196 aacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagct 261  Q
    |||| ||||| ||||||| ||||||||||  ||||| | ||||||||| |||||||||||||||||    
T  47540708 aacaatcttaattccaaatggacagaaaaatgagataa-gagaagaatgactcgtcaacacaagct 47540644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 312
Target Start/End: Complemental strand, 1640501 - 1640379
Alignment:
Q  191 ttaagaacactcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaagctggat--ggagaagagagaaagagttctcg 288  Q
    ||||||||||||| |  |||||||| ||  |||  | |||||| |||||||| ||||||| ||||| | |||||   || ||||| ||||| ||||||||    
T  1640501 ttaagaacactctcaaatccaaaggaacgaaaagagaagatgaagagaagaacaactcgttaacacgaactggagagggggaagacagaaaaagttctcg 1640402  T
Q  289 acaactcaatagaaactctttggt 312  Q
    ||| |||||||| |||||||||||    
T  1640401 acatctcaatag-aactctttggt 1640379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 13 - 315
Target Start/End: Complemental strand, 148137 - 147825
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt---------ctttattc 103  Q
    |||||| ||| ||||||||||||||  |||||||||||||||||  |||| || |||||| ||| ||||||||||||||||||         ||||||||    
T  148137 aatatttaaagaatatttatatactactaagatcattcttaattttgatgggacattatttttcaaaaagggactatgatcttaaaagtattctttattc 148038  T
Q  104 cgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactct 203  Q
     ||||||| |||| ||||||||  ||||| ||||| |||| ||||||||||||||| |||| |||||| |||||||||||| |||| |||||||||||||    
T  148037 tgaagggagatacattatcgaatggactatgtttttaagatctttcttaattccgatgggacattatatcgaatagggactaaggtcttaagaacactct 147938  T
Q  204 tacttccaaagggacagaaaat-ggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaa 302  Q
    || || | |||||| ||||||  |||||||| |||||||||| |||||||||||||||| || || ||||||| |||||||||||||||| |||||||||    
T  147937 tattttcgaagggaaagaaaaaaggagatgaggagaagaatatctcgtcaacacaagctagagggggaagagataaagagttctcgacaattcaatagaa 147838  T
Q  303 actctttggtgtg 315  Q
    |||||||||||||    
T  147837 actctttggtgtg 147825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 30 - 474
Target Start/End: Original strand, 7472 - 7928
Alignment:
Q  30 tatatactgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------ctttattccgaagggacatacgtt 119  Q
    ||||||| |||||||||||||||||||| || | || ||| || ||||||| |||||||||||||||         |||||||| |||| ||||||  ||    
T  7472 tatataccgttaagatcattcttaattctgacgggacattgttattccaaatagggactatgatcttaaaagtactctttattctgaagagacatatatt 7571  T
Q  120 atcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggaca 219  Q
    ||||||| ||||| ||||| |||||| ||||||||| |||||||| |||| |||||| |||||||  ||| |||| |||||||||| |||| ||||||||    
T  7572 atcgaagggactatgtttt-aagaccattcttaatttcgaagggacattaaaccgaaaagggactatggtcttaataacactcttaattccgaagggaca 7670  T
Q  220 gaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgg 316  Q
    ||||| |||||||| || |||||  ||||||||||||||| |  ||   |||||| ||||||||||||| |||||||||||| ||||||||||||||||     
T  7671 gaaaaaggagatgaagataagaacgactcgtcaacacaagtcaagaaagggagaaaagagaaagagttcccgacaactcaat-gaaactctttggtgtgt 7769  T
Q  317 gttt--gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtg 414  Q
     |||  |||| |||| ||||||||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||||| |||||||| ||||  |    
T  7770 ttttttgaaccgagtggagtcctctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctaatggataagattaaaatgg 7869  T
Q  415 aacttattcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatcca 474  Q
    |  |||| |||||| ||||||||||| ||||  ||||| |||  |||| |||||||||||    
T  7870 agtttatccattaaacagttcaacaacacttgtggataggat-caaaagaaacaaatcca 7928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 140 - 482
Target Start/End: Original strand, 4547 - 4892
Alignment:
Q  140 aagacctttcttaattccgaagggatatt-ataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaatggagatgatgaga 238  Q
    |||||| |||||||||||||||||| ||| | ||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  4547 aagaccattcttaattccgaagggacatttaaaccgaatagggactatggtcttaagaacactcttaattccgaagggacagaaaaaggagatgaagaga 4646  T
Q  239 agaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt-gaactgagttgagt 334  Q
    ||||  ||||||||||||||| |  ||   |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| ||||||||| ||||    
T  4647 agaaagactcgtcaacacaagtcaagaaagggagaagagagaaagagttcccgacaactcaat-gaaactctttggtgtgttttttgaactgagtggagt 4745  T
Q  335 cctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaatcagt 433  Q
    | ||| | |||||||||||| ||||| ||||||||||||||||||| ||  |||||||||| | |||||||| |||| ||||  |||| |||||||||||    
T  4746 catctatttatatagagattctgtaactgttttagcaaaaattgcgacaacagttactctagtggataagattaaaa-tgaagtttatccattaatcagt 4844  T
Q  434 tcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    ||||||| ||||  ||||| |||  |||  ||||||||||| |||||||    
T  4845 tcaacaacacttgtggataggat-caaaggaaacaaatccacaaaagtg 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 13 - 456
Target Start/End: Complemental strand, 443692 - 443235
Alignment:
Q  13 aatattgaaataatatttatat--actgttaagatcattcttaattccgatgagatattattgttccaaa-agggactatgatctt---------cttta 100  Q
    |||||||||||| | |||||||  || ||||||||||||||||||||| | | || ||| || ||||||| |||||||||||| ||         |||||    
T  443692 aatattgaaatactttttatatgtaccgttaagatcattcttaattccaacgggacattgttattccaaatagggactatgattttaaaagtactcttta 443593  T
Q  101 ttccgaagggacatacgttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacac 200  Q
    ||| |||||||||||  ||||||||| ||||| ||||| |||||| |||||||||||||||| | |||| || ||| |||||||  ||| ||||||||||    
T  443592 ttctgaagggacatatattatcgaagggactatgtttt-aagaccattcttaattccgaaggaacattaaactgaaaagggactatggtcttaagaacac 443494  T
Q  201 tcttacttccaaagggacagaaaatggagatgatgagaagaataactcgtcaacacaag-ctggat--ggagaagagagaaagagttctcgacaactcaa 297  Q
    | ||| |||| |||||||| |||| |||||||| || |||||  ||| || |||||||| |  ||   |||||| | ||||||||||| |||||||||||    
T  443493 tattaattccgaagggacaaaaaaaggagatgaagacaagaaagacttgttaacacaagtcaagaaagggagaaaatagaaagagttcccgacaactcaa 443394  T
Q  298 tagaaactctttggtgtgggttt-gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaa 396  Q
    | ||||||||||||||||  ||| ||||||||| ||||||||| | | |||||||||| ||||| ||||||||||||||||| | |||||||||||||||    
T  443393 t-gaaactctttggtgtgttttttgaactgagtggagtcctctatttgtatagagattctgtaactgttttagcaaaaattgtgacagtagttactctaa 443295  T
Q  397 tagataagatcaaaagtgaa-cttattcattaatcagttcaacaatacttcaggataagat 456  Q
    | |||||||| |||| ||||  |||| |||||||||||||||||| ||||  |||||||||    
T  443294 tggataagat-aaaaatgaagtttatacattaatcagttcaacaacacttatggataagat 443235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 222 - 482
Target Start/End: Original strand, 5797 - 6055
Alignment:
Q  222 aaatggagatgatgagaagaataactcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtgggttt- 320  Q
    ||||||||| || ||||| |||| ||||||| |||||| || | ||||||||||||||||||| |||||||||||||| ||||||||||||||   |||     
T  5797 aaatggagacgaggagaacaatagctcgtcaccacaagatgcagggagaagagagaaagagttatcgacaactcaataaaaactctttggtgtctctttc 5896  T
Q  321 gaactgagttgagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaactta 420  Q
    ||||| ||| ||||||||| | |||||||||||||||||| ||||||||||||||||||| |   |  | ||||||| |||||||||||| | |||  ||    
T  5897 gaactaagtggagtcctctatttatatagagattttgtaactgttttagcaaaaattgcgcc--caaatgctctaatggataagatcaaacg-gaaacta 5993  T
Q  421 ttcattaatcagttcaacaatacttcaggataagataaaaaataaacaaatccataaaagtg 482  Q
    |  ||||||||||||||||| ||||  ||||||| ||||||| ||||||||||| |||||||    
T  5994 tctattaatcagttcaacaacacttgtggataaggtaaaaaagaaacaaatccacaaaagtg 6055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 5647 - 5729
Alignment:
Q  13 aatattgaaataatatttatatactgttaagatcattcttaattccgatgagatattattgttccaaaagggactatgatctt 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||| |||||||||||||    
T  5647 aatattgaaagaatatttatatactgttaagatcattcttaattccaatgagacatttttattccaaaatggactatgatctt 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 462
Target Start/End: Original strand, 35802 - 35933
Alignment:
Q  331 gagtcctctgtatatatagagattttgtaattgttttagcaaaaattgcggcagtagttactctaatagataagatcaaaagtgaa-cttattcattaat 429  Q
    ||||||||||| |||||||| ||||||||| |||||||||||| |||||| ||| |||||||||||| |||||||| |||| ||||  |||| |||||||    
T  35802 gagtcctctgtttatatagaaattttgtaactgttttagcaaacattgcgacagcagttactctaatggataagattaaaa-tgaagtttatccattaat 35900  T
Q  430 cagttcaacaatacttcaggataagataaaaaa 462  Q
    || |||||||| ||||  ||||| ||| |||||    
T  35901 catttcaacaacacttgtggataggatcaaaaa 35933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 315
Target Start/End: Original strand, 256281 - 256449
Alignment:
Q  147 ttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaagggacagaaaat-ggagatgatgagaagaataa 245  Q
    ||||| |||| ||||||| | || |||||| |||||||  ||| ||||||||| ||||| |||| || ||||||||||  |||||| | |||||||| |     
T  256281 ttctttattctgaagggacaataaaccgaaaagggactacggtcttaagaacattcttaattccgaatggacagaaaaaaggagataaggagaagaaaat 256380  T
Q  246 ctcgtcaacacaagctggatggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    || ||  || |||| |||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  256381 cttgttcacgcaagttggaggaagaagagagaaagagttatcgacaactcaatag-aactctttggtgtg 256449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 9536 - 9431
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaagggatattataccgaatagggacttaggtattaagaacactcttacttccaaaggga 217  Q
    ||||||||| ||||| | | | |||||| |||||||||||||| ||| |||| |||||| |||||||  ||| ||||||||||||||| |||| ||||||    
T  9536 ttatcgaagggactatgctcttaagaccattcttaattccgaatggacattaaaccgaaaagggactatggtcttaagaacactcttaattccgaaggga 9437  T
Q  218 cagaaa 223  Q
    ||||||    
T  9436 cagaaa 9431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 145904 - 145856
Alignment:
Q  266 ggagaagagagaaagagttctcgacaactcaatagaaactctttggtgtg 315  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  145904 ggagaagagagaaagagttatcgacaactcaatag-aactctttggtgtg 145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 171402 - 171356
Alignment:
Q  118 ttatcgaagtgactacgttttgaagacctttcttaattccgaaggga 164  Q
    ||||||||| ||||||||| | |||||| ||||||||||||||||||    
T  171402 ttatcgaagggactacgttcttaagaccattcttaattccgaaggga 171356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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