View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15564_low_2 (Length: 463)
Name: NF15564_low_2
Description: NF15564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15564_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 3 - 444
Target Start/End: Original strand, 25692899 - 25693348
Alignment:
| Q |
3 |
aaaattaatttaaactgaaacacgcacacacgtaattataaatataaatgttaggcatataaactatccacgtaattttctcttccaccccatgtgatgc |
102 |
Q |
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| T |
25692899 |
aaaattaatttaaactgaaacacgcacacacgtaattataaatataaatgttaggcatataaactatccacgtaatgttctcttccaccccatgtgatgc |
25692998 |
T |
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| Q |
103 |
aggagacaagaaggtccaaagcaattaactagtgcatatttccgtgtataatatatgacattgtatcatgaacacacacatggccaataaactgaggcgt |
202 |
Q |
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| T |
25692999 |
aggagacaagaaggtccaaagcaattaactagtgcatatttccgtgtataatatatgacattgtatcatgaacacacacatggccaataaactgaggcgt |
25693098 |
T |
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| Q |
203 |
aacactcccacgtctaaaccaatcttgctggatggataaggagaccatgcaaataatcgagcatcaatttttccaaagaaaaataaatgaagaaagaaac |
302 |
Q |
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| T |
25693099 |
aacactcccacgtctaaaccaatcttgctggatggataaggagaccatgcaaataatcgagcatcaatttttccaaagaaaaataaatgaagaaagaaac |
25693198 |
T |
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| Q |
303 |
annnnnnnggtcgaatgaagaaagaaacataaacaaagaaaaatgtca--------ttattataagtaaagaggaatcgataaccacaagtgccgaaata |
394 |
Q |
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| T |
25693199 |
atttttttggtcgaatgaagaaagaaacataaacaaagaaaaatgtcattattaatttattataagtaaagaggaatcgataaccacaagtgcggaaata |
25693298 |
T |
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| Q |
395 |
agtacaatccgtgccaatgtgacaggcagtgttgtcttgttatgtctgtt |
444 |
Q |
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| T |
25693299 |
agtacaatccgtgccaatgtgacaggcagtgttgtcttgttatgtctgtt |
25693348 |
T |
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