View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15564_low_4 (Length: 302)
Name: NF15564_low_4
Description: NF15564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15564_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 7 - 284
Target Start/End: Complemental strand, 9624438 - 9624158
Alignment:
| Q |
7 |
agaagagtagtaacaaaggaagatagaaaaagctgaaattgagaaaacatacttcaaagttcttttcaagaatttcttcttgttcaatctcttctcaact |
106 |
Q |
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| T |
9624438 |
agaagagtagtaacaaaggaagatagaaaaagctgaaattgagaaaacatacttcaaagttcttttcaagaatttcttcttgttcaatctcttctcaact |
9624339 |
T |
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| Q |
107 |
tgatccatatttagaagaagagttgctttgaaattgtgctaattaattaatggaggatattgagaatttgtgagaggaatgagagaatggtttgggaata |
206 |
Q |
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| T |
9624338 |
tgatccatatttagaagaagagttgctttcaaattgtgctaattaattaatggaggatattgagaatttgtgagaggaatgagagaatggtttgggaata |
9624239 |
T |
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| Q |
207 |
aaaattatatgttttggtttgagtgaacattgaactataagatctctattta---taagacctgaatctactatagtatct |
284 |
Q |
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| T |
9624238 |
aaaattatatgttgtggcttgagtgaacattgaactataagatctctatttatagtaagacctgaatctactatagtatct |
9624158 |
T |
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