View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15565_high_23 (Length: 252)
Name: NF15565_high_23
Description: NF15565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15565_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 45343742 - 45343975
Alignment:
| Q |
1 |
ttagtagagatgttagttttgaagaggataagggatggaattgggggaggaatgttgaagaagtaaagcatgacatattggtatgtgaaggcaataatga |
100 |
Q |
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| T |
45343742 |
ttagtagagatgttagttttgaagaggataagggatggaattgggggaggaatgttgaagaagtaaagcatgacatattggtatgtgaaggcaataatga |
45343841 |
T |
|
| Q |
101 |
tagtgaagattccacctttgaaagtgaagaagaggttgtagaagacactgaaacaccagctgacacagttcaagaggtagaaacaatgacctcaacatca |
200 |
Q |
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| T |
45343842 |
tagtgaagattccacctttgaaagtgaagaagaggttgtagaagacactgaaacaccagctgacacagttcaagaggtagaaacaatgacctcaacatca |
45343941 |
T |
|
| Q |
201 |
agtgattcatctaatgaagatccaccggtacatg |
234 |
Q |
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| T |
45343942 |
agtgattcatctaatgaagatccaccggtacatg |
45343975 |
T |
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