View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15567_high_12 (Length: 394)
Name: NF15567_high_12
Description: NF15567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15567_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 3294891 - 3295156
Alignment:
| Q |
1 |
tctttttctacatatattttcttaggcagctctagtttatttccatttgatttccttcattaccatgtggtagccaaaccttcaataaaccttgcgtgtt |
100 |
Q |
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| T |
3294891 |
tctttttctacatatattttcttaggcagctctagtttatttccatttgatttccttcattaccatgtggtagccaaaccttcaataaaccttgcgtgtt |
3294990 |
T |
|
| Q |
101 |
tgacctatatgtgagaattccctaattctagtcatttcaggtgtcttgtgtttagacttttaaatcaaattattctctcatcaaaactattg----acat |
196 |
Q |
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||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
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| T |
3294991 |
tgagctataggtgagaattctttaattctagtcatttcaggtgccttgtgtttaggcttttaaatcaaattattctctcatcaaaactattgacatacat |
3295090 |
T |
|
| Q |
197 |
acgatcaattcagccacacatttacctttgt-ccttacaaatataagagtaccacgctatcctaat |
261 |
Q |
| |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3295091 |
acgatcaattcagccacacatttacctttgtcccttacaaatataagagtaccacgctatcctaat |
3295156 |
T |
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