View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15567_low_18 (Length: 341)
Name: NF15567_low_18
Description: NF15567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15567_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 20248773 - 20248673
Alignment:
| Q |
2 |
taaccctgatgacagaacaattgctttaaatgaaaacttcaatgcatatgaagttatgggtataaaaaagaaggatggtgtatccagaagaaaaggtaga |
101 |
Q |
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| T |
20248773 |
taactctgatgacagaacaattgctttgaatgaaaacttcaatgcatctgaagttatgggtataaaaaagaaggatggtgtatccagaggaaaaggtaga |
20248674 |
T |
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| Q |
102 |
c |
102 |
Q |
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| T |
20248673 |
c |
20248673 |
T |
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