View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15568_low_5 (Length: 247)
Name: NF15568_low_5
Description: NF15568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15568_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 7182368 - 7182591
Alignment:
| Q |
9 |
attattcttgatagtaattaaataaatttattgagcaaatatatatgatatctttaataaatattt-gtttaccataacttggttgctttggtatattct |
107 |
Q |
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| T |
7182368 |
attattctagatagtaattaaataaatttattgagcaaatatatatgatatctttaataaatattttgtttaccataacttggttgctttggtatattct |
7182467 |
T |
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| Q |
108 |
cctcttttcctcttatagttaggttctttgaaaacttttgactatctcttactttcttcaaatcaagaatccctgcttcttctaatgaaaaaatggaaaa |
207 |
Q |
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| T |
7182468 |
cctcttttcctcttatagttaggttctttgaaaacttttgactatctcttactttcttcaaatcaagaatccctgcttcttctaatgaataaatggaaaa |
7182567 |
T |
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| Q |
208 |
tgcagtagctgctattgcagttac |
231 |
Q |
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| T |
7182568 |
tgcagtagctgctattgcagttac |
7182591 |
T |
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