View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15569_low_2 (Length: 547)

Name: NF15569_low_2
Description: NF15569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15569_low_2
NF15569_low_2
[»] chr6 (60 HSPs)
chr6 (219-415)||(9107288-9107488)
chr6 (230-411)||(16766642-16766827)
chr6 (230-324)||(8365448-8365542)
chr6 (231-297)||(17841530-17841596)
chr6 (230-328)||(18367868-18367966)
chr6 (230-302)||(10339054-10339126)
chr6 (228-326)||(8714014-8714112)
chr6 (230-323)||(10294144-10294237)
chr6 (228-301)||(34595182-34595255)
chr6 (340-416)||(7938056-7938132)
chr6 (230-301)||(24645529-24645600)
chr6 (230-301)||(28152146-28152217)
chr6 (228-326)||(5970035-5970133)
chr6 (230-304)||(7248414-7248488)
chr6 (229-310)||(3209438-3209519)
chr6 (230-295)||(17327590-17327655)
chr6 (231-284)||(31959215-31959268)
chr6 (340-412)||(9027122-9027194)
chr6 (225-301)||(28715343-28715419)
chr6 (230-301)||(4877991-4878061)
chr6 (236-275)||(15489667-15489706)
chr6 (231-326)||(31384954-31385048)
chr6 (230-328)||(16488519-16488617)
chr6 (230-283)||(9629460-9629513)
chr6 (238-275)||(16388171-16388208)
chr6 (232-273)||(26178620-26178661)
chr6 (230-267)||(32839571-32839608)
chr6 (229-301)||(7378027-7378099)
chr6 (340-412)||(8777016-8777088)
chr6 (230-274)||(13360313-13360357)
chr6 (340-416)||(13851676-13851752)
chr6 (233-301)||(32978842-32978910)
chr6 (230-326)||(34073278-34073372)
chr6 (216-279)||(7938170-7938233)
chr6 (230-289)||(8776908-8776967)
chr6 (230-301)||(16833356-16833427)
chr6 (231-266)||(17341622-17341657)
chr6 (241-284)||(21044825-21044868)
chr6 (241-284)||(21068083-21068126)
chr6 (230-273)||(34446647-34446690)
chr6 (340-382)||(3398593-3398635)
chr6 (340-415)||(4877887-4877958)
chr6 (230-264)||(7723199-7723233)
chr6 (233-279)||(8389411-8389457)
chr6 (230-268)||(8805524-8805562)
chr6 (233-279)||(9025448-9025494)
chr6 (252-326)||(9522925-9522999)
chr6 (231-273)||(27903963-27904005)
chr6 (229-266)||(4388163-4388200)
chr6 (218-279)||(7625186-7625247)
chr6 (230-279)||(9027237-9027286)
chr6 (228-265)||(10842617-10842654)
chr6 (340-373)||(12696307-12696340)
chr6 (340-373)||(17841632-17841665)
chr6 (230-266)||(426478-426514)
chr6 (230-266)||(5732474-5732510)
chr6 (340-412)||(7977873-7977945)
chr6 (340-412)||(10294051-10294123)
chr6 (230-266)||(10649371-10649407)
chr6 (230-326)||(17435233-17435329)
[»] chr5 (53 HSPs)
chr5 (230-373)||(39698524-39698671)
chr5 (230-413)||(21522693-21522880)
chr5 (230-413)||(21533259-21533446)
chr5 (234-321)||(30183588-30183675)
chr5 (233-301)||(39268541-39268609)
chr5 (231-326)||(21542064-21542159)
chr5 (230-326)||(7677739-7677835)
chr5 (230-301)||(21576685-21576756)
chr5 (230-301)||(43564929-43565000)
chr5 (229-370)||(31084309-31084448)
chr5 (231-326)||(3966537-3966632)
chr5 (243-412)||(19579645-19579818)
chr5 (224-265)||(14674333-14674374)
chr5 (340-413)||(15382420-15382493)
chr5 (230-275)||(15884051-15884096)
chr5 (232-301)||(21190998-21191067)
chr5 (232-289)||(23015926-23015983)
chr5 (230-326)||(37328775-37328869)
chr5 (230-274)||(38464313-38464357)
chr5 (231-326)||(6401532-6401627)
chr5 (340-415)||(6770484-6770559)
chr5 (230-272)||(14873599-14873641)
chr5 (230-328)||(21814293-21814391)
chr5 (228-266)||(22423762-22423800)
chr5 (228-265)||(2548464-2548501)
chr5 (229-270)||(4105338-4105379)
chr5 (230-267)||(17123129-17123166)
chr5 (229-274)||(19820327-19820372)
chr5 (230-267)||(35017125-35017162)
chr5 (228-265)||(36838615-36838652)
chr5 (230-266)||(10298633-10298669)
chr5 (229-310)||(19552475-19552554)
chr5 (229-301)||(42893408-42893480)
chr5 (242-301)||(15382533-15382592)
chr5 (234-325)||(36642696-36642786)
chr5 (228-266)||(9929684-9929722)
chr5 (230-264)||(15086563-15086597)
chr5 (230-296)||(27932288-27932354)
chr5 (219-305)||(32766861-32766947)
chr5 (232-266)||(43001888-43001922)
chr5 (230-267)||(6247692-6247729)
chr5 (340-373)||(14674252-14674285)
chr5 (242-279)||(17088361-17088398)
chr5 (232-265)||(18421779-18421812)
chr5 (340-373)||(22013397-22013430)
chr5 (232-301)||(30502330-30502399)
chr5 (232-301)||(30542673-30542742)
chr5 (230-267)||(39695951-39695988)
chr5 (341-410)||(41995417-41995486)
chr5 (230-266)||(11596398-11596434)
chr5 (232-264)||(16203746-16203778)
chr5 (230-266)||(24906252-24906288)
chr5 (228-264)||(35252256-35252292)
[»] chr8 (49 HSPs)
chr8 (230-412)||(22651920-22652106)
chr8 (230-414)||(29510233-29510421)
chr8 (414-474)||(2577432-2577493)
chr8 (228-305)||(29447499-29447576)
chr8 (32-95)||(2577594-2577660)
chr8 (225-325)||(15816053-15816153)
chr8 (231-323)||(29447040-29447132)
chr8 (230-325)||(8343351-8343446)
chr8 (230-283)||(8343033-8343086)
chr8 (122-217)||(2577500-2577595)
chr8 (228-267)||(25566912-25566951)
chr8 (230-305)||(34450961-34451036)
chr8 (230-301)||(36450694-36450765)
chr8 (228-274)||(13436908-13436954)
chr8 (229-326)||(11927014-11927111)
chr8 (229-326)||(11944699-11944796)
chr8 (230-295)||(16641909-16641974)
chr8 (230-323)||(21465449-21465542)
chr8 (235-279)||(31109463-31109507)
chr8 (471-526)||(2577360-2577415)
chr8 (230-301)||(3951476-3951547)
chr8 (234-301)||(5813640-5813707)
chr8 (230-264)||(11833935-11833969)
chr8 (223-301)||(28819250-28819328)
chr8 (230-280)||(30067968-30068018)
chr8 (232-301)||(3025599-3025668)
chr8 (230-295)||(24858070-24858135)
chr8 (230-301)||(4298830-4298897)
chr8 (230-274)||(4673354-4673398)
chr8 (230-274)||(17751731-17751775)
chr8 (230-274)||(17760718-17760762)
chr8 (230-325)||(22197671-22197766)
chr8 (230-265)||(18964274-18964309)
chr8 (242-289)||(22943301-22943348)
chr8 (230-265)||(31514938-31514973)
chr8 (230-300)||(14134748-14134818)
chr8 (231-301)||(43737752-43737822)
chr8 (232-301)||(926730-926799)
chr8 (232-301)||(20679337-20679406)
chr8 (340-373)||(25192390-25192423)
chr8 (229-326)||(26902103-26902200)
chr8 (230-279)||(38487157-38487206)
chr8 (230-267)||(39820510-39820547)
chr8 (261-325)||(2572016-2572080)
chr8 (228-280)||(7472459-7472511)
chr8 (230-274)||(11803345-11803389)
chr8 (232-272)||(16987990-16988030)
chr8 (230-274)||(18407794-18407838)
chr8 (233-301)||(40332239-40332307)
[»] chr3 (49 HSPs)
chr3 (230-326)||(34185052-34185148)
chr3 (230-324)||(41961579-41961673)
chr3 (231-326)||(14216926-14217021)
chr3 (231-326)||(14223055-14223150)
chr3 (232-369)||(4987222-4987363)
chr3 (230-326)||(8039764-8039860)
chr3 (230-326)||(14209147-14209243)
chr3 (230-326)||(28812549-28812645)
chr3 (230-301)||(55401123-55401194)
chr3 (245-301)||(10955000-10955056)
chr3 (229-301)||(11252024-11252096)
chr3 (230-326)||(17005548-17005644)
chr3 (223-305)||(14223781-14223863)
chr3 (228-322)||(14829727-14829822)
chr3 (230-301)||(35222986-35223057)
chr3 (230-301)||(40993275-40993346)
chr3 (227-300)||(8842378-8842451)
chr3 (228-273)||(20503541-20503586)
chr3 (230-279)||(21211364-21211413)
chr3 (230-295)||(27505305-27505370)
chr3 (340-411)||(16000059-16000130)
chr3 (228-326)||(16789046-16789143)
chr3 (254-323)||(14832136-14832205)
chr3 (230-279)||(25074865-25074914)
chr3 (232-289)||(28918063-28918120)
chr3 (230-279)||(40052382-40052431)
chr3 (230-266)||(4990912-4990948)
chr3 (228-324)||(9800076-9800172)
chr3 (340-412)||(10335329-10335401)
chr3 (230-282)||(10455863-10455915)
chr3 (230-412)||(15796223-15796409)
chr3 (230-281)||(4466540-4466591)
chr3 (230-301)||(7171549-7171620)
chr3 (228-267)||(11610591-11610630)
chr3 (228-310)||(14342511-14342594)
chr3 (230-273)||(14979225-14979268)
chr3 (231-265)||(8789489-8789523)
chr3 (340-370)||(33359747-33359777)
chr3 (231-273)||(34910393-34910435)
chr3 (340-373)||(3865599-3865632)
chr3 (340-373)||(10318077-10318110)
chr3 (231-284)||(15999951-16000004)
chr3 (228-273)||(21367342-21367387)
chr3 (229-266)||(21861658-21861695)
chr3 (281-326)||(34910351-34910396)
chr3 (230-323)||(49651716-49651808)
chr3 (231-259)||(5339197-5339225)
chr3 (229-305)||(11313723-11313799)
chr3 (228-260)||(35624940-35624972)
[»] chr2 (48 HSPs)
chr2 (228-324)||(26769547-26769643)
chr2 (230-326)||(30717459-30717555)
chr2 (230-326)||(37419777-37419873)
chr2 (230-326)||(35056902-35056998)
chr2 (230-301)||(18840953-18841024)
chr2 (228-326)||(24975253-24975350)
chr2 (231-301)||(28596517-28596587)
chr2 (228-326)||(32749752-32749850)
chr2 (227-325)||(34784908-34785006)
chr2 (232-301)||(2438661-2438730)
chr2 (229-326)||(11223792-11223888)
chr2 (229-301)||(37559025-37559097)
chr2 (231-326)||(44860354-44860449)
chr2 (235-301)||(12224271-12224337)
chr2 (230-320)||(18420363-18420453)
chr2 (232-300)||(19942314-19942382)
chr2 (229-301)||(24009343-24009415)
chr2 (230-301)||(34993922-34993993)
chr2 (230-301)||(38117099-38117170)
chr2 (231-273)||(3444827-3444869)
chr2 (232-326)||(15657898-15657992)
chr2 (229-267)||(22084755-22084793)
chr2 (230-300)||(27084318-27084388)
chr2 (225-283)||(29367278-29367336)
chr2 (230-284)||(41843511-41843565)
chr2 (227-284)||(28412422-28412479)
chr2 (234-279)||(37411188-37411233)
chr2 (230-279)||(42511322-42511371)
chr2 (286-326)||(4882681-4882721)
chr2 (340-412)||(31283992-31284064)
chr2 (242-301)||(5040782-5040841)
chr2 (230-301)||(15972921-15972992)
chr2 (230-273)||(18631351-18631394)
chr2 (230-301)||(20242667-20242738)
chr2 (230-301)||(28677962-28678033)
chr2 (230-328)||(36096304-36096402)
chr2 (232-326)||(36756275-36756369)
chr2 (340-412)||(2438762-2438831)
chr2 (340-373)||(6940238-6940271)
chr2 (229-266)||(10535684-10535721)
chr2 (340-373)||(24894372-24894405)
chr2 (228-265)||(31285709-31285746)
chr2 (230-267)||(34221463-34221500)
chr2 (345-414)||(34785030-34785099)
chr2 (340-373)||(37558960-37558993)
chr2 (230-275)||(44635567-44635612)
chr2 (230-266)||(19536361-19536397)
chr2 (231-267)||(23354582-23354618)
[»] chr7 (50 HSPs)
chr7 (228-326)||(24339676-24339774)
chr7 (232-326)||(26033392-26033486)
chr7 (230-301)||(598256-598327)
chr7 (231-301)||(32287404-32287474)
chr7 (230-323)||(7438743-7438836)
chr7 (230-371)||(5409771-5409910)
chr7 (230-295)||(43027404-43027469)
chr7 (230-325)||(2334285-2334379)
chr7 (230-301)||(21864856-21864927)
chr7 (230-295)||(1433513-1433578)
chr7 (230-283)||(24105744-24105797)
chr7 (230-279)||(40131939-40131988)
chr7 (229-301)||(21880200-21880272)
chr7 (230-301)||(5835295-5835366)
chr7 (230-301)||(15680857-15680928)
chr7 (230-273)||(18212973-18213016)
chr7 (230-279)||(6490786-6490835)
chr7 (232-325)||(9408265-9408358)
chr7 (230-279)||(9778575-9778624)
chr7 (340-373)||(12010023-12010056)
chr7 (230-263)||(23128603-23128636)
chr7 (230-267)||(38134335-38134372)
chr7 (229-305)||(38804488-38804565)
chr7 (340-416)||(1433394-1433470)
chr7 (230-270)||(3991392-3991432)
chr7 (231-267)||(11272531-11272567)
chr7 (230-326)||(25822689-25822785)
chr7 (230-266)||(29763129-29763165)
chr7 (230-266)||(35862034-35862070)
chr7 (227-274)||(5307331-5307378)
chr7 (230-289)||(17852060-17852119)
chr7 (228-267)||(23751981-23752020)
chr7 (242-325)||(27229252-27229335)
chr7 (233-275)||(8842282-8842324)
chr7 (225-279)||(14729773-14729827)
chr7 (231-301)||(20549839-20549909)
chr7 (230-264)||(30813882-30813916)
chr7 (230-295)||(32093954-32094020)
chr7 (230-279)||(7133212-7133261)
chr7 (345-414)||(18213082-18213151)
chr7 (228-273)||(21568559-21568604)
chr7 (340-373)||(24105661-24105694)
chr7 (230-267)||(28973881-28973918)
chr7 (230-267)||(29812598-29812635)
chr7 (231-268)||(49107886-49107923)
chr7 (286-326)||(11272571-11272611)
chr7 (230-302)||(11738151-11738223)
chr7 (226-274)||(20545180-20545228)
chr7 (340-412)||(25481846-25481918)
chr7 (234-274)||(40287306-40287346)
[»] chr1 (58 HSPs)
chr1 (242-417)||(6612112-6612291)
chr1 (232-412)||(42359391-42359564)
chr1 (230-373)||(40917734-40917879)
chr1 (230-326)||(47989531-47989627)
chr1 (232-373)||(1486646-1486785)
chr1 (230-310)||(9828094-9828174)
chr1 (230-301)||(37598879-37598950)
chr1 (230-373)||(18556385-18556532)
chr1 (231-321)||(21032245-21032335)
chr1 (230-323)||(32461393-32461485)
chr1 (230-326)||(31694639-31694735)
chr1 (230-301)||(18337377-18337448)
chr1 (228-326)||(5944317-5944415)
chr1 (231-301)||(40258874-40258944)
chr1 (230-299)||(5898206-5898275)
chr1 (230-323)||(6427501-6427594)
chr1 (232-296)||(16297223-16297287)
chr1 (225-301)||(22515822-22515898)
chr1 (230-326)||(25934650-25934746)
chr1 (230-273)||(15765834-15765877)
chr1 (230-301)||(18190048-18190119)
chr1 (230-301)||(46348323-46348394)
chr1 (230-268)||(35702542-35702580)
chr1 (340-413)||(398808-398881)
chr1 (230-279)||(2218298-2218347)
chr1 (230-275)||(22881567-22881612)
chr1 (230-275)||(36878540-36878585)
chr1 (230-274)||(6574052-6574096)
chr1 (340-412)||(13011259-13011331)
chr1 (230-274)||(21365992-21366036)
chr1 (230-266)||(22947813-22947849)
chr1 (230-326)||(30173691-30173787)
chr1 (230-301)||(1815305-1815376)
chr1 (230-285)||(9630561-9630616)
chr1 (230-285)||(9690213-9690268)
chr1 (345-412)||(10577783-10577850)
chr1 (230-273)||(27965940-27965983)
chr1 (351-414)||(48548016-48548079)
chr1 (242-300)||(2896073-2896131)
chr1 (233-275)||(21038160-21038202)
chr1 (230-267)||(16812638-16812675)
chr1 (228-304)||(17831460-17831537)
chr1 (230-279)||(19562556-19562604)
chr1 (231-264)||(28663682-28663715)
chr1 (230-279)||(29144320-29144369)
chr1 (230-267)||(34741928-34741965)
chr1 (230-267)||(42325641-42325678)
chr1 (340-373)||(46348426-46348459)
chr1 (230-279)||(46940748-46940797)
chr1 (234-279)||(48040418-48040463)
chr1 (340-380)||(2896164-2896204)
chr1 (230-266)||(7918154-7918190)
chr1 (340-412)||(21366063-21366135)
chr1 (235-295)||(26830641-26830701)
chr1 (228-272)||(34712321-34712365)
chr1 (229-301)||(38078600-38078672)
chr1 (231-267)||(45534131-45534167)
chr1 (230-266)||(48450550-48450586)
[»] chr4 (53 HSPs)
chr4 (231-326)||(30982808-30982903)
chr4 (230-415)||(23292926-23293104)
chr4 (230-324)||(19482704-19482798)
chr4 (223-274)||(29205543-29205594)
chr4 (230-323)||(24613630-24613723)
chr4 (231-295)||(14465006-14465070)
chr4 (230-274)||(16184906-16184950)
chr4 (233-285)||(28084588-28084640)
chr4 (230-301)||(12895214-12895285)
chr4 (228-274)||(715543-715589)
chr4 (228-274)||(752869-752915)
chr4 (229-301)||(21945551-21945623)
chr4 (230-274)||(28964188-28964232)
chr4 (228-324)||(47264022-47264118)
chr4 (231-274)||(5922532-5922575)
chr4 (231-266)||(17425348-17425383)
chr4 (232-279)||(22440559-22440606)
chr4 (228-295)||(36635384-36635451)
chr4 (230-301)||(40224438-40224509)
chr4 (230-304)||(53381530-53381605)
chr4 (230-328)||(5414101-5414199)
chr4 (228-305)||(24343556-24343634)
chr4 (230-267)||(5775304-5775341)
chr4 (228-301)||(49431074-49431147)
chr4 (230-274)||(3064868-3064912)
chr4 (231-295)||(3947702-3947766)
chr4 (230-310)||(22234819-22234899)
chr4 (229-301)||(34306743-34306815)
chr4 (222-274)||(37203327-37203379)
chr4 (231-266)||(4383449-4383484)
chr4 (230-301)||(16073442-16073513)
chr4 (230-273)||(40784029-40784072)
chr4 (230-300)||(8423658-8423728)
chr4 (231-301)||(12323968-12324038)
chr4 (230-280)||(18513175-18513225)
chr4 (229-267)||(28470447-28470485)
chr4 (235-325)||(30838245-30838335)
chr4 (228-266)||(42640607-42640645)
chr4 (232-301)||(4157197-4157266)
chr4 (232-301)||(4157484-4157553)
chr4 (230-279)||(4672025-4672074)
chr4 (230-267)||(11596297-11596334)
chr4 (340-373)||(30298929-30298962)
chr4 (230-267)||(30299011-30299048)
chr4 (340-373)||(30327797-30327830)
chr4 (230-267)||(30327879-30327916)
chr4 (228-264)||(10499225-10499261)
chr4 (230-310)||(15724483-15724563)
chr4 (230-266)||(17876249-17876285)
chr4 (230-266)||(18844423-18844459)
chr4 (340-412)||(20633429-20633501)
chr4 (229-265)||(30621752-30621788)
chr4 (340-400)||(35158028-35158088)
[»] scaffold0003 (2 HSPs)
scaffold0003 (228-373)||(241577-241726)
scaffold0003 (230-273)||(236914-236957)
[»] scaffold0019 (1 HSPs)
scaffold0019 (230-326)||(71759-71855)
[»] scaffold0086 (1 HSPs)
scaffold0086 (230-325)||(2963-3058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (228-321)||(8562-8655)
[»] scaffold0512 (1 HSPs)
scaffold0512 (230-301)||(4976-5047)
[»] scaffold0008 (1 HSPs)
scaffold0008 (232-326)||(263303-263397)
[»] scaffold0171 (1 HSPs)
scaffold0171 (230-326)||(23545-23641)
[»] scaffold0136 (1 HSPs)
scaffold0136 (230-326)||(3778-3874)
[»] scaffold0475 (1 HSPs)
scaffold0475 (230-273)||(3384-3427)
[»] scaffold0053 (2 HSPs)
scaffold0053 (340-415)||(8739-8814)
scaffold0053 (228-301)||(8846-8919)
[»] scaffold0793 (1 HSPs)
scaffold0793 (228-274)||(4819-4865)
[»] scaffold0652 (2 HSPs)
scaffold0652 (231-301)||(403-473)
scaffold0652 (340-410)||(505-575)
[»] scaffold0044 (1 HSPs)
scaffold0044 (237-326)||(53214-53303)
[»] scaffold0123 (1 HSPs)
scaffold0123 (223-326)||(44447-44550)
[»] scaffold0380 (1 HSPs)
scaffold0380 (230-284)||(8666-8720)
[»] scaffold0154 (1 HSPs)
scaffold0154 (230-304)||(13469-13543)
[»] scaffold0057 (1 HSPs)
scaffold0057 (230-305)||(24079-24155)
[»] scaffold0036 (1 HSPs)
scaffold0036 (232-326)||(9678-9772)
[»] scaffold0227 (1 HSPs)
scaffold0227 (228-273)||(15047-15092)
[»] scaffold0168 (1 HSPs)
scaffold0168 (230-265)||(21372-21407)
[»] scaffold0116 (1 HSPs)
scaffold0116 (345-420)||(9834-9909)
[»] scaffold0027 (2 HSPs)
scaffold0027 (230-265)||(46741-46776)
scaffold0027 (340-413)||(46625-46698)
[»] scaffold0004 (1 HSPs)
scaffold0004 (231-266)||(92905-92940)
[»] scaffold0306 (1 HSPs)
scaffold0306 (223-301)||(13454-13532)
[»] scaffold0152 (1 HSPs)
scaffold0152 (223-301)||(21795-21873)
[»] scaffold0128 (1 HSPs)
scaffold0128 (231-281)||(32772-32822)
[»] scaffold0623 (1 HSPs)
scaffold0623 (231-328)||(5926-6023)
[»] scaffold0103 (1 HSPs)
scaffold0103 (340-373)||(51794-51827)
[»] scaffold0011 (1 HSPs)
scaffold0011 (227-304)||(17539-17616)
[»] scaffold0050 (1 HSPs)
scaffold0050 (233-301)||(70326-70394)


Alignment Details
Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 219 - 415
Target Start/End: Original strand, 9107288 - 9107488
Alignment:
Q  219 ttagttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaa 318  Q
    |||||| | ||||||||||||| | |||||||||||||||| ||||||| |||||| ||||| ||  |||| ||||||||||||||| |||| |||||||    
T  9107288 ttagttttcatctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaa 9107387  T
Q  319 ttacactgca----gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggt 414  Q
    |||||||| |    ||||       ||||||||||||||||| |||||| ||||||||| | |||| | | || |||||| ||||| |||||||||||||    
T  9107388 ttacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcataggt 9107487  T
Q  415 t 415  Q
    |    
T  9107488 t 9107488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 411
Target Start/End: Complemental strand, 16766827 - 16766642
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||| || |||||||||||||||||| |||||| |||| |||  |||| ||||||||||||||| |||| ||||||||||||||| |     
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcata 411  Q
       ||||       ||||||||||||||||| |||||||||||||| | | |||| | | || ||||||||||||  |||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 230 - 324
Target Start/End: Original strand, 8365448 - 8365542
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||| |||| |||| || |||||||||||| |||| |||||||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacac 8365542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 17841530 - 17841596
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccg 297  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 18367966 - 18367868
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    ||||||||||| ||||||||| |||| ||||||||||| |||||  |||  |||| |||||||||||||||||||| |||| | | |||||||||||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgca 18367868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 10339054 - 10339126
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacg 302  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||  |||| |||| ||||||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacg 10339126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 8714112 - 8714014
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| |||||||||||||||| ||||||||||  ||||| | |  |||| |||| ||||||||||||||| | ||  ||||||||||||||    
T  8714112 atctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactg 8714014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 10294237 - 10294144
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    |||||||||||||||||||||| ||||||  |||||| ||| ||| ||||||||| |||| |||||| |||||||| |||| | | ||||||||    
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattaca 10294144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 34595255 - 34595182
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||  |||| |||| |||| |||||||||||    
T  34595255 atctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 7938132 - 7938056
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtta 416  Q
    ||||||||||||||||| |||||||||||||| | | |||| | | || |||||||||||| |||||||||||||||    
T  7938132 aaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcataggtta 7938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 24645600 - 24645529
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||||||||| ||||||||| ||||||   |||||| |||| |||| ||||||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 28152217 - 28152146
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||  |||||||||||||||||| |||||| |||||| |||| |||| |||| |||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 5970035 - 5970133
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| || ||||||||||||| ||||||||||  ||||| | |  |||| |||| ||||||||||||||| | ||  ||||||||||||||    
T  5970035 atctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactg 5970133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 7248488 - 7248414
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgac 304  Q
    ||||||||||| ||||||||||||||| | |||||||| |||||| ||||||||  ||||  |||||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgac 7248414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 3209519 - 3209438
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgac 310  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||| || | |||| |||  ||||| ||||||||| ||||    
T  3209519 tctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgac 3209438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 17327590 - 17327655
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  |||| |||| |||| |||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 31959268 - 31959215
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    |||||||||| |||||||||||||||||| ||||||| |||||| |||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtc 31959215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 9027194 - 9027122
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||| ||||| |||||||||||||||| | |||| | | || |||||||||||| |||||||||||    
T  9027194 aaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 28715419 - 28715343
Alignment:
Q  225 attatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| |||||||||||  ||||| |||| |||||||||||||| |||||| |||| |||| |||| |||||||||||    
T  28715419 attacctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 4878061 - 4877991
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||||||||||||||||||||| || |||||| |||  |||| |||| |||||||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 15489667 - 15489706
Alignment:
Q  236 agcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15489667 agcacagacactcctcggattaggcgtatcccagtgtcgt 15489706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 31385048 - 31384954
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| ||||||||| |||||||||||||||| |||| | |||| |||| ||||  ||| | ||||||||  ||| |||||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactg 31384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 16488519 - 16488617
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    |||||||||||  ||| |||| |||| ||||||||||| ||| |  |||| |||| |||| ||||||||||||||| |||| | | |||||||||||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgca 16488617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 9629513 - 9629460
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgt 283  Q
    ||||||||||  ||||||||||||||||| |||||| |||||||| ||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgt 9629460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 16388171 - 16388208
Alignment:
Q  238 cacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16388171 cacagacagtcctcggattaggcgtgtcccagtgtcgt 16388208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 32839571 - 32839608
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||||||||||||||| |||||||||||||||||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtccc 32839608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 7378099 - 7378027
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||| |||||| ||| |||||| |||||||| |||||| |  |||||| |||| |||||||||||    
T  7378099 tctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacac 7378027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 8777016 - 8777088
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    |||||||||| |||||| |||||||||||||||| | |||| |   || |||||||||||| |||||||||||    
T  8777016 aaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 13360313 - 13360357
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcg 13360357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 13851752 - 13851676
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtta 416  Q
    ||||||||||| |||||  ||||||||||||||| | |||||||  || |||||||| | | |||||||||||||||    
T  13851752 aaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccgaacccgtgcttcataggtta 13851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||| ||||||||| ||||||| |||||||| |||||| |||  |||| |||| |||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 34073278 - 34073372
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||||||||||| |||||  ||||||| ||||||  |||||||| |||  ||||||||||||||| |||| | | |||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcg-gcacatgtcgtgt-agacaccgacacgacaccgacccatataattacactg 34073372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 7938233 - 7938170
Alignment:
Q  216 catttagttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||| |||| || ||||||||||| |||||||||||||| ||||||||| | |||||| ||||    
T  7938233 cattttgttaatagctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 8776908 - 8776967
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtc 289  Q
    ||||||||||| |||||||||||||||||| ||||| | |||||| |||| |||| ||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 16833427 - 16833356
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||| |||||||||||||||||| || ||||||  |||||| || | |||| ||||| ||||||||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacac 16833356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 17341622 - 17341657
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17341622 tatgaagcacaaacactcctcggattaggcgtgtcc 17341657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 21044825 - 21044868
Alignment:
Q  241 agacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    ||||||||||  |||||||||||||||||||||| |||||||||    
T  21044825 agacactccttagattaggcgtgtcccagtgtcggacacatgtc 21044868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 21068083 - 21068126
Alignment:
Q  241 agacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    ||||||||||  |||||||||||||||||||||| |||||||||    
T  21068083 agacactccttagattaggcgtgtcccagtgtcggacacatgtc 21068126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 34446690 - 34446647
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||    
T  34446690 ctatgaagcacggacactccttggattaggtgtgtcccagtgtc 34446647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 3398635 - 3398593
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttc 382  Q
    ||||||||||||||||| |||||||||||||||| | ||||||    
T  3398635 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttc 3398593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 4877958 - 4877887
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtt 415  Q
    ||||||||||||||||| | |||||| | ||||| | |||||| ||||    ||||||||||||||||||||||||    
T  4877958 aaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgt----gtccgtatctgtgcttcataggtt 4877887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgt 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||| |||||||||||||||||| ||||||| |||||| ||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 8805524 - 8805562
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccca 268  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtccca 8805562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 9025448 - 9025494
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||| |||||| ||||||||||||||||||| |||||| ||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 326
Target Start/End: Complemental strand, 9522999 - 9522925
Alignment:
Q  252 ggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||||| | |||||| |||| ||||   || ||||||||||| ||| |||| |||||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactg 9522925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 27903963 - 27904005
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||| |||||||||||||||||||||| |||||||| ||||    
T  27903963 tatgaatcacagacactcctcggattaggtgtgtcccactgtc 27904005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 4388200 - 4388163
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  4388200 tctatgaagcacagacacttctcggataaggcgtgtcc 4388163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 7625247 - 7625186
Alignment:
Q  218 tttagttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||| |||||||||||||||  |||||||| |||||| |||||| || |||||| ||||    
T  7625247 tttagttgttatctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacac 7625186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 9027286 - 9027237
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||| |||||||| ||||||| |||||||| |||||| ||||    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacac 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 10842654 - 10842617
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  10842654 atctatgaagcacggacactcctcggattagccgtgtc 10842617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 12696340 - 12696307
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  12696340 aaattattagctgtgtcggcgtgtcagtgtccgt 12696307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 17841632 - 17841665
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  17841632 aaattattagctgtgtcggcgtgtcagtgtccgt 17841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 426478 - 426514
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtcc 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||  |||||||||||||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 7977873 - 7977945
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||||||||| |||||||||| ||| | | |||| ||| || ||||||| |||| |||||| ||||    
T  7977873 aaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccgtgctttatag 7977945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 10294123 - 10294051
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||| || || || ||||||| ||||| | |||| | | ||||||||||||||| |||||||||||    
T  10294123 aaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 17435329 - 17435233
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||| || ||||||  || |||||| ||||||||||||||| |||| |||| |||| |||| |||||  |||   || |||||||||||||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactg 17435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 6e-29; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 230 - 373
Target Start/End: Complemental strand, 39698671 - 39698524
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||||||||||||||||||||||| | |||||| | ||||||| |||| |||||||||||||||  ||| ||||||||||||||| |     
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
       ||||       ||||||||||||||||||||||||||||||||||    
T  39698571 tatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 230 - 413
Target Start/End: Complemental strand, 21522880 - 21522693
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    |||||| |||| ||||||| | |||||||||||||||| ||| || |||| |||| |||| ||||||||||||||| ||||  |||||||||||||| |     
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatagg 413  Q
       || |       ||||||||||||||||| |||||||||||||||| | |||| | | |  |||||||||||| ||||||||||||    
T  21522780 tatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatagg 21522693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 230 - 413
Target Start/End: Complemental strand, 21533446 - 21533259
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    |||||| |||| ||||||| | |||||||||||||||| ||| || |||| |||| |||| ||||||||||||||| ||||  |||||||||||||| |     
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatagg 413  Q
       || |       ||||||||||||||||| |||||||||||||||| | |||| | | |  |||||||||||| ||||||||||||    
T  21533346 tatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatagg 21533259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 30183675 - 30183588
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaatta 321  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||| |||| ||||||| ||| |||||||| |||| ||||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaatta 30183588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 21542159 - 21542064
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||| |||| |||| |||| ||||| |||||||||| |||||| |||| |||| |||| ||||||||||||||| |||| |||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactg 21542064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 7677835 - 7677739
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||| |||  || | |||| ||||||||||||||| |||| ||| ||||| |||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactg 7677739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 21576685 - 21576756
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||| |||| |||| |||| ||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacac 21576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 43565000 - 43564929
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||| ||||||||||||||||||| | |||| ||||||||| |||| |||||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 370
Target Start/End: Complemental strand, 31084448 - 31084309
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||| |||| |||| |||      ||||||||||| |||| |||||||||||| || |    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgt------ccgacacgacatcgacacttgtaattacattgaa 31084355  T
Q  329 ----gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtc 370  Q
        ||||       ||||||||||||||||| |||||||||||||    
T  31084354 ttatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 3966632 - 3966537
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| ||||||||||||||||| ||||||||  ||| | ||||||||  |||| ||||| ||||||||| |||| | | |||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactg 3966537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 412
Target Start/End: Complemental strand, 19579818 - 19579645
Alignment:
Q  243 acactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca----gtgannnnnn 338  Q
    ||||||||||||||||||||||||| ||||   ||| ||||| |||| ||||| ||||||||| |||| ||||||||| ||||  |    ||||          
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T
Q  339 naaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
     ||||||||||||||||| |||| ||||||||||| |||| | | | ||  |||| |||||| |||||||||||    
T  19579718 caaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcatag 19579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 14674374 - 14674333
Alignment:
Q  224 tattatctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  14674374 tattatctatgaagcacagacactcctcggattaggtgtgtc 14674333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 15382493 - 15382420
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatagg 413  Q
    ||||||||||||||||| |||||||| ||||||| | |||| | | || |||||||||||| ||||||||||||    
T  15382493 aaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 15884096 - 15884051
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  15884096 ctatgaaacacagacactcctcggattaggcgtgttccagtgtcgt 15884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 21190998 - 21191067
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| |||||||||||||||||||||||||| | |||| |||| |||  |||| |||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 23015926 - 23015983
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtc 289  Q
    ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtc 23015983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 37328775 - 37328869
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||||||||||||| |||| |||| || ||| || ||  || |||| ||||||||||||||| |||| | |||||||||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgca--tcgtgtccgacaccgacacgacaccgacacatgtaattacactg 37328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 38464313 - 38464357
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcg 38464357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 6401627 - 6401532
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| ||||||||| |||| |||||| |||| |||||  |||| |||| |||| ||||| ||||||||| |||| | | |||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactg 6401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 6770559 - 6770484
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtt 415  Q
    |||||||||| |||||||| |||||||||||||| |  ||||| | || ||| |||||||| ||||||||||||||    
T  6770559 aaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcataggtt 6770484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 14873641 - 14873599
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgt 272  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgt 14873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 21814391 - 21814293
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    |||||||||||  ||| |||| |||| ||||||||||| ||| |  |||| |||| |||| ||||||||||||||| |||| | | |||||||||||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgca 21814293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 22423762 - 22423800
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22423762 atctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 2548501 - 2548464
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||||||||||||||||||||||||||||| |||||    
T  2548501 atctatgaagcacagacactcctcggattaggtgtgtc 2548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 4105379 - 4105338
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagt 270  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  4105379 tctacgaagcacggacactcctcggattaggcgtgtcccagt 4105338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 17123166 - 17123129
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc 17123129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 19820327 - 19820372
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  19820327 tctatgaagcacggacactcctctgattaggcgtgtcccggtgtcg 19820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 35017162 - 35017125
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtccc 35017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 36838652 - 36838615
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36838652 atctatgaagcacagacactccttggattaggcgtgtc 36838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 310
Target Start/End: Original strand, 19552475 - 19552554
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtac-acatgtcatgtctgacaccgacacgacaacgac 310  Q
    |||||||| ||| |||||||||||||||||| |||||| ||||||| || |||   | |||||||||||||||||||| ||||    
T  19552475 tctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggacaaca---cttgtctgacaccgacacgacatcgac 19552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 42893480 - 42893408
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||  ||||||||||  |||||||||||||  |||||| |||| |||  ||||||||||||||||    
T  42893480 tctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacac 42893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||||||||||||||||| |||||| |||  |||| ||||  ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 325
Target Start/End: Original strand, 36642696 - 36642786
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||||| ||||||||||  |||||||||||||| |||||| |||| |||| |||| |||||| ||| |||| |||| ||| || |||||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacact 36642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 9929722 - 9929684
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  9929722 atctatgaagcacagacactcctcgaattagtcgtgtcc 9929684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 15086597 - 15086563
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgt 264  Q
    |||||||||| ||||||||||||||||||||||||    
T  15086597 ctatgaagcaaagacactcctcggattaggcgtgt 15086563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 27932354 - 27932288
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacacc 296  Q
    |||||||||||| |||||||||| |||||||||||||  |||||  |||| |||| |||| ||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 32766861 - 32766947
Alignment:
Q  219 ttagttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgaca 305  Q
    ||||| || ||||||||||||| |||||||||| |||||| ||| |||  |||||| |||| |||| | |  |||||||||||||||    
T  32766861 ttagtaataatctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgaca 32766947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 43001922 - 43001888
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||| |||||||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtcc 43001888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 6247729 - 6247692
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  6247729 ctatgaagcacagacacttctcggattaggtgtgtccc 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 14674285 - 14674252
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  14674285 aaattattagctgtgtcggcgtgtcagtgtccgt 14674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 17088398 - 17088361
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 18421779 - 18421812
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||||||||||||||||||| ||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtc 18421812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 22013430 - 22013397
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  22013430 aaattattagctgtgtcggcgtgtcagtgtccgt 22013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 30502330 - 30502399
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||  ||| |||| ||||||||| ||||||||||||| |||  |||| |||| |||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 30542673 - 30542742
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||  ||| |||| ||||||||| ||||||||||||| |||  |||| |||| |||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 30542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 39695951 - 39695988
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  39695951 ctatgaagcaccgacactcctaggattaggcgtgtccc 39695988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 41995486 - 41995417
Alignment:
Q  341 aattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcat 410  Q
    ||||||||| |||||| ||||||||||||| || | || | ||| || |||||||||||| |||||||||    
T  41995486 aattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 11596398 - 11596434
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    |||||||||||| | ||||||||||||||||||||||    
T  11596398 ctatgaagcacaaatactcctcggattaggcgtgtcc 11596434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 264
Target Start/End: Original strand, 16203746 - 16203778
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgt 264  Q
    |||||||||||||||||||||||||| ||||||    
T  16203746 atgaagcacagacactcctcggattaagcgtgt 16203778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 24906252 - 24906288
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgtcc 24906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 35252256 - 35252292
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgt 264  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35252256 atctatgaagcacatatactcctcggattaggcgtgt 35252292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 412
Target Start/End: Complemental strand, 22652106 - 22651920
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| ||||||||| |||| ||||||||||||||| |||| |||||||||| | || |     
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
       ||||       ||||||||||||||||| |||||||||||||||| | |||| | | ||  ||||||||||| || ||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcatag 22651920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 230 - 414
Target Start/End: Original strand, 29510233 - 29510421
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| ||||  ||| |||| ||||||||||| ||| |||| |||||||||| |||| |     
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggt 414  Q
       ||||       ||||||||||||||||| |||||||||||||||| | |||| | | || | |||| ||||| |||||||||||||    
T  29510333 tttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcataggt 29510421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 474
Target Start/End: Complemental strand, 2577493 - 2577432
Alignment:
Q  414 ttattattataaccattgttctatacattaaactaaatgg-ttcaattttatatcttgcagg 474  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2577493 ttattattataaccattcttctatacattaaactaaatggtttcaattttatatcttgcagg 2577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 29447576 - 29447499
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgaca 305  Q
    ||||||||||||| |||||||||| |||||| | |||||| |||||| ||||||||| ||||||||||||||||||||    
T  29447576 atctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgaca 29447499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 2577660 - 2577594
Alignment:
Q  32 aaagggataaga---gtctttaaagcgctatcagttgaacttcaacaccatagaagtgtcatttgat 95  Q
    ||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2577660 aaagggataagatgcgtctttaaagctctatcagttgaacttcaacaccatagaagtgtcatttgat 2577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 15816053 - 15816153
Alignment:
Q  225 attatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    |||| ||||||||||| |||||| ||||||||||||||||||| |||||| |  | |||| |||| |||||| |||||||| |||| ||| |||||||||    
T  15816053 attagctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacac 15816152  T
Q  325 t 325  Q
    |    
T  15816153 t 15816153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 29447040 - 29447132
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    |||||||||| ||||||||| |||||||||||||||  |||||  ||||||||| |||| |||||||||| |||| |||| |||||| |||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttaca 29447132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 8343446 - 8343351
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||| |||| |||| |||||    ||||||  ||| ||||||||||||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacact 8343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 8343086 - 8343033
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgt 283  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgt 8343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 2577595 - 2577500
Alignment:
Q  122 atataggtggaagttaggaaaagaaaaatattttcgcttgcgtaacaaaattttatatt-nnnnnnnnccacaattaatcttcacaccttatcatca 217  Q
    ||||||||||||||||| |||||||||| ||||||||||  ||||| ||||||||||||         |||||||||||||||||||||||||||||    
T  2577595 atataggtggaagttag-aaaagaaaaacattttcgcttaagtaaccaaattttatattaaaagaaaaccacaattaatcttcacaccttatcatca 2577500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 25566951 - 25566912
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25566951 atctatgaagcacagacactcctcggattaggcgtgtccc 25566912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 34450961 - 34451036
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgaca 305  Q
    ||||||||||| ||||||||| |||| ||||||||||| |||||  |||| |||| |||| |||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgaca 34451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 36450694 - 36450765
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||  ||| |||| |||||| ||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 13436908 - 13436954
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  13436908 atctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 11927014 - 11927111
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| ||||||| |||||||||||||||| |  ||| | | ||||||| ||| ||||||| |||||||| |||| | | |||||||||||    
T  11927014 tctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactg 11927111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 11944796 - 11944699
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||||  |||||| |||||||||||||||| | |||||| | ||||||| ||| ||||| | |||||||| |||| | | |||||||||||    
T  11944796 tctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactg 11944699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 16641909 - 16641974
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||||||||||||||||||||||||||| ||||||| ||||   ||||||||| |||| |||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 21465542 - 21465449
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| ||||||||||  ||||||||| |||| |||| | |||| |||| |||| ||||| ||||||||| | || ||||||||||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattaca 21465449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 31109463 - 31109507
Alignment:
Q  235 aagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacac 31109507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 471 - 526
Target Start/End: Complemental strand, 2577415 - 2577360
Alignment:
Q  471 caggccatggtgcaaattacatccttgtgggacgggtgaatggatgaaactgctct 526  Q
    ||||||||||| ||| |||||||||||||||||| | |||||||||||||| ||||    
T  2577415 caggccatggtacaagttacatccttgtgggacgagcgaatggatgaaactactct 2577360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 3951476 - 3951547
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| || |||||| ||||||||||||| || |||||  |||| |||| ||||||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||| ||||||||||  |||||||||||||| |||||| |||| |||| |||| |||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 11833969 - 11833935
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgt 264  Q
    |||||||||||||||||||||||||||||||||||    
T  11833969 ctatgaagcacagacactcctcggattaggcgtgt 11833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 28819328 - 28819250
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| |||||||||||||| | |||||||||||||| ||||| || |||| | | |||| || ||||||||||||||||    
T  28819328 ttatgatctatgaagcacatatactcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacac 28819250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 30067968 - 30068018
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacaca 280  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacaca 30068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 3025668 - 3025599
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| ||||||||||||||||| |||||| |||||||  |||| |||| |||| ||||| |||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacac 3025599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 24858135 - 24858070
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||||||||| ||||||||| ||||||||||||||| | || | ||||||||| |||| |||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacac 24858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 4298830 - 4298897
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||| |||| |||||  ||||||||||||||    
T  4298830 ctatgaagcac-gacactcctcagattaggcgtgtccc-gtgtcgaacacgtgtca--tctgacaccgacac 4298897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 4673354 - 4673398
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcg 4673398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 17751775 - 17751731
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcg 17751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 17760762 - 17760718
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcg 17760718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 325
Target Start/End: Original strand, 22197671 - 22197766
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac-gacaacgacgcttgtaattacact 325  Q
    |||| |||||| |||||||||| |||||||||||  || |||||| |||| ||||||||| |||| |||||| ||||  ||| ||||||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacact 22197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 18964309 - 18964274
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||||||||||||||||||||||| |||||||||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtc 18964274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 22943301 - 22943348
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtc 289  Q
    |||||||||||||||||||||||||| |||||| |||| |||| ||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 14134818 - 14134748
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    ||||||| ||| ||||||||||| |||||||||||||  ||| || |||| |||| ||| |||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgaca 14134748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 43737752 - 43737822
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| ||||||||| |||| |||||| |||| |||||  |||| |||| |||| |||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacac 43737822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 926730 - 926799
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| |||||||||||||| | || |||||| |||||| |||| ||||  ||| |||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacac 926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 20679337 - 20679406
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||  |||||||||||| | ||||||||||| |||||| |||| |||   |||||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacac 20679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 25192390 - 25192423
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  25192390 aaattattagctgtgtcggcgtgtcagtgtccgt 25192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 26902103 - 26902200
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| |||||||||| ||| ||||||||||| ||| |  |||| |||| |||| |||||  | |||||| |||| | | |||||||||||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactg 26902200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 38487157 - 38487206
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||||||||||||||||||| | ||||||  |||||| ||||    
T  38487157 ctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacac 38487206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 39820547 - 39820510
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc 39820510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 2572016 - 2572080
Alignment:
Q  261 gtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||||| || ||| |||| |||| |||| ||||| ||||||||| |||| ||||||||||||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacact 2572080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 7472459 - 7472511
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacaca 280  Q
    ||||||||| |||| ||||| ||||||||||||||||| ||| |||| |||||    
T  7472459 atctatgaaacacatacacttctcggattaggcgtgtctcagcgtcggacaca 7472511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 11803389 - 11803345
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcg 11803345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgt 272  Q
    ||||||||| |||||||||||||||||| ||||||| ||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 18407838 - 18407794
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| ||||||||||  ||||||||||||| |||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcg 18407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 40332307 - 40332239
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| ||| |||||||||||||||||||| ||||| |||| | |||| |||| ||||  ||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 34185052 - 34185148
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||| ||||  ||||||||| |||| |||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactg 34185148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 230 - 324
Target Start/End: Original strand, 41961579 - 41961673
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||| |||| |||| || |||||||||||| |||| |||||||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacac 41961673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 14217021 - 14216926
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| |||| |||| |||||  ||||||||  ||| |||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactg 14216926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 14223150 - 14223055
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| |||| |||| |||||  ||||||||  ||| |||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactg 14223055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 232 - 369
Target Start/End: Original strand, 4987222 - 4987363
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca--- 328  Q
    |||||| || |||||||||||||||||||||||||| |||||| |||| |||| ||||  ||||||||||| || | || ||||||||||||||| |       
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  329 -gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgt 369  Q
     ||||       ||||||||||||||||| ||||||||||||    
T  4987322 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 8039764 - 8039860
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||||| |||| |||||||| ||||||||| |||||| |||  | ||||||| ||||||||||||||| |||| | | |||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactg 8039860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 14209243 - 14209147
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||| || |||||||| || ||||  |||||||||| |||| |||| |||||||||||||||  ||| |||||||||||||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactg 14209147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 28812645 - 28812549
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||| ||||||||||||||||||||||||||||||   ||||| |||  | || ||||||||||| |||||||| |||| ||||||| |||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactg 28812549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 55401194 - 55401123
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||||||||||||||||||||| | |||||| |||| |||| |||| |||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 10955056 - 10955000
Alignment:
Q  245 actcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||||||||||||||||||||| |||| |||| |||| |||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 11252096 - 11252024
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||||||||||||||||||||||||||| ||  || || |||| |||  ||||||||||||||||    
T  11252096 tctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac 11252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 17005548 - 17005644
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| ||||||||||||||||  ||||||  |||||  |||| ||| |||||||||||| |||| ||| |||| ||| |||||||||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactg 17005644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 14223781 - 14223863
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc-atgtctgacaccgacacgaca 305  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||| ||||| |||| ||||  |||| |||||||||||||||    
T  14223781 ttattatctataaagcacagaaactcctcagattaggcgtgtccca-tgtcggacacgtgtcggtgtcggacaccgacacgaca 14223863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 14829822 - 14829727
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgta-cacatgtcatgtctgacaccgacacgacaacgacgcttgtaattac 322  Q
    ||||| ||||||| |||| ||||| ||||||||||||||| |||||| | ||||| || ||||  |||||||||||||| |||| |||||||||||    
T  14829822 atctacgaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattac 14829727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 35223057 - 35222986
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||||||||||| | ||||||||| |||||  |||| ||||||||| |||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacac 35222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 40993275 - 40993346
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||  |||||||||||||||||||||||||| |||||| |||  |||| |||| |||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 8842451 - 8842378
Alignment:
Q  227 tatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    |||||||||||||| |||||||||||||||||||||||| || | ||  |||  |||| |||||||||||||||    
T  8842451 tatctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgaca 8842378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 20503586 - 20503541
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  20503586 atctatgaagcacggacactcctcggattaggcgtgtcccggtgtc 20503541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 21211413 - 21211364
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacac 21211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 27505370 - 27505305
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||| |||| |||| |||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 16000059 - 16000130
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcata 411  Q
    |||||||||| |||||| ||||||||||||| || | |||||| | || |||||||||||| ||||||||||    
T  16000059 aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 16789143 - 16789046
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||||| ||||||||||  |||||| ||||||| |||| | |||  ||||||||| ||||| ||||||||| | || ||| |||||||||||    
T  16789143 atctatgaagcacggacactcctcaaattaggtgtgtccc-gtgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactg 16789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 14832205 - 14832136
Alignment:
Q  254 attaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    |||||||||||||| |||||| |||| |||| |||| || ||||||||||||  ||| ||||||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattaca 14832136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 25074914 - 25074865
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 25074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 28918120 - 28918063
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtc 289  Q
    ||||||||  ||||||||| ||||||||||||||||||||||| |||| |||| ||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 28918063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 40052431 - 40052382
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||  ||||||||||||||||||||||||| |||||| ||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 9800172 - 9800076
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    ||||||||||||| || || |||| ||||||||||||||  |||||  |||| | |||| ||||| |||||||||||| |||| |||  ||||||||    
T  9800172 atctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgtatcatctctgataccgacacgacaccgacacttacaattacac 9800076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 10335329 - 10335401
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    |||||||||| |||||| |||||||||||||||| | |||| | | || ||||| |||||| |||||||||||    
T  10335329 aaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 10455915 - 10455863
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatg 282  Q
    |||||||||||| |||||||| ||||||  ||||||||||||||| |||||||    
T  10455915 ctatgaagcacatacactccttggattaaacgtgtcccagtgtcggacacatg 10455863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 412
Target Start/End: Original strand, 15796223 - 15796409
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgcag 329  Q
    |||||||||||  |||||| | ||||||||||||| || |||| | |||| |||  |||| |||||| |||||||| ||||  |||||||||||||| |     
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  330 t----gannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    |    ||       ||||||||| ||||||| |||||||| ||||||| | |||| | | || ||||||| |||| |||||||||||    
T  15796323 tatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 4466540 - 4466591
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacat 281  Q
    ||||||||||| ||||||||||| || || ||||||||||||||| ||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacat 4466591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 7171620 - 7171549
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| | |||||||| |||||||||||||| | |||||| |||| |||| |||| |||||| ||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacac 7171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 11610630 - 11610591
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  11610630 atctatgaagcacggacactcctcagattaggcgtgtccc 11610591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 14342594 - 14342511
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtca-tgtctgacaccgacacgacaacgac 310  Q
    |||||| ||||||||||||| ||||||||| |||||| |  |||||| | | |||||| |||| ||| ||||||||||||||||    
T  14342594 atctatcaagcacagacacttctcggattaagcgtgttctggtgtcggataaatgtcagtgtccgacgccgacacgacaacgac 14342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 14979268 - 14979225
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  14979268 ctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 8789489 - 8789523
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||||||| ||||||||||||||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtc 8789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 370
Target Start/End: Complemental strand, 33359777 - 33359747
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtc 370  Q
    |||||||||||||||||||||||||||||||    
T  33359777 aaattattagctgtgtcagcgtgtcagtgtc 33359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||| ||||||||||||||||| |||||||| |||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 3865599 - 3865632
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  3865599 aaattattagctgtgtcggcgtgtcagtgtccgt 3865632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 10318077 - 10318110
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  10318077 aaattattagctgtgtcggcgtgtcagtgtccgt 10318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 15999951 - 16000004
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    ||||| |||| ||||||||| |||||||||||||||| |||||| |||| ||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtc 16000004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 21367387 - 21367342
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||||||    
T  21367387 atctgtgaagcacagacacttctcggattaggtgtgtccaagtgtc 21367342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 21861695 - 21861658
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  21861695 tctatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 34910396 - 34910351
Alignment:
Q  281 tgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||| |||||||| |||||| |||| |||||||||||||||    
T  34910396 tgtcatgtccgacaccgatacgacaccgactcttgtaattacactg 34910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 49651716 - 49651808
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| |||||| ||||||||||| ||||||| |||||| | |  |||| |||| |   ||||||||||| |||| ||||||||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattaca 49651808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 5339225 - 5339197
Alignment:
Q  231 tatgaagcacagacactcctcggattagg 259  Q
    |||||||||||||||||||||||||||||    
T  5339225 tatgaagcacagacactcctcggattagg 5339197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 11313723 - 11313799
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgaca 305  Q
    |||| |||| |||||||||| | |||||||| |||||||||||||  |||| || | ||||||||||  ||||||||    
T  11313723 tctacgaagtacagacactcttaggattaggagtgtcccagtgtcaaacacgtgacgtgtctgacactaacacgaca 11313799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 35624972 - 35624940
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggc 260  Q
    ||||||||||||||||||| |||||||||||||    
T  35624972 atctatgaagcacagacacccctcggattaggc 35624940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 26769643 - 26769547
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| |||| || ||||||| |||| |||| |||||||||||||    
T  26769643 atctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacac 26769547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 30717459 - 30717555
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||| |||| |||| |||| |||| |||||||||| |||| |||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactg 30717555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 37419873 - 37419777
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||   || |||| ||||||||||||||| || | |||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactg 37419777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 35056998 - 35056902
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||||||| ||||||||||||  | |||||| |||| |||| |||| ||||||||||||||| |||| | | |||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactg 35056902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 18840953 - 18841024
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| |||  |||| ||||||||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 24975253 - 24975350
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||||| |||||||||| ||||||   ||||||||||||| ||||||||  |||||||||| ||||||||| |||||| | || ||||||||    
T  24975253 atctatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactg 24975350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 28596587 - 28596517
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| |||||||||||||||||| |||||| ||||||| |||| |||| |||| |||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 32749752 - 32749850
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| | |||||||||  ||| |||||||||||||||||| |||||||||| ||| |||| ||||||||||  ||| ||| | |||||||||    
T  32749752 atctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactg 32749850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 325
Target Start/End: Original strand, 34784908 - 34785006
Alignment:
Q  227 tatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||  |||  |||| |||| || |||||||||||| |||| | | ||||||||||    
T  34784908 tatctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacact 34785006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||  |||| |||| |||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 11223792 - 11223888
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||  |||  |||| |||| |||||| ||| |||| |||| |||||||||||||||    
T  11223792 tctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactg 11223888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 37559097 - 37559025
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||| |||||||||||||||| |||||| || |||||| |||| ||||| ||| |||||||||||    
T  37559097 tctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacac 37559025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 44860449 - 44860354
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| ||||||||||| |||||| |||||||  ||||| ||||||||| ||||  ||||| |||||||| |||| | | |||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactg 44860354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 12224337 - 12224271
Alignment:
Q  235 aagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||| | || |||| |||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacac 12224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 320
Target Start/End: Original strand, 18420363 - 18420453
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaatt 320  Q
    |||||||||||||||||| |||||||||||||||||  | ||||| |||| ||||||||| ||||  ||||| ||| |||| ||| |||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataatt 18420453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    ||||||||  |||||||||||||||||||||||||| |||||  ||||||| | |||| ||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 24009415 - 24009343
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||| ||||||||| |||| ||||||||||| |||||  |||| |||| |||| |||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 34993922 - 34993993
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||  |||||||| | ||||||||||||||||||||| ||||||||| |||  ||||| |||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacac 34993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 38117099 - 38117170
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||| |||| |||  |||| |||||| ||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacac 38117170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 15657992 - 15657898
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||  ||||||||||||| |||||||||||| | |||| |||| ||||  ||| |||| | |||||||| ||||  ||||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactg 15657898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 22084755 - 22084793
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  22084755 tctatgaagcacagacactcatcggattaggcgtgtccc 22084793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 27084388 - 27084318
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    |||||||||| ||||||||||| ||||||||||||| | |||| | |||| |||| |||| ||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 29367278 - 29367336
Alignment:
Q  225 attatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgt 283  Q
    ||||||||||||||||| ||| |||||||||||||| |||| | |||||| ||||||||    
T  29367278 attatctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgt 29367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 41843565 - 41843511
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    |||||||||||||||||||||||||| | ||||||||| |||||| |||| ||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtc 41843511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 28412479 - 28412422
Alignment:
Q  227 tatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||| ||||    
T  28412479 tatctatgaagcactgacgctcctcgaattagccgtgtcccagtgtcggacacgtgtc 28412422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 37411188 - 37411233
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacac 37411233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 42511322 - 42511371
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| ||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 4882681 - 4882721
Alignment:
Q  286 tgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  4882681 tgtctgacaccgacacgacatcgacacttgtaattacactg 4882721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 31284064 - 31283992
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||| ||||| |||||| ||||| ||| || ||| | | || ||||||||||||||||||||||||    
T  31284064 aaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcatag 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 5040841 - 5040782
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| ||| |||||||||||| | |||| ||||||||| |||| |||||||||||    
T  5040841 gacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 15972992 - 15972921
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||| || |||||||||| ||||||| | |||| |||| |||| |||| |||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 18631351 - 18631394
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtc 18631394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 20242667 - 20242738
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||||||||| |||||| ||||||||||  |||||  |||| |||  |||| |||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacac 20242738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 28678033 - 28677962
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| ||||||||||| | | || |||||||| |||||| |||| |||| ||| ||||||||||||    
T  28678033 ctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacaccgacac 28677962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 36096304 - 36096402
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    ||||||||||| ||||||| | || | ||||||||||| |||||  |||| |||| |||| |||| |||||||||| ||||   | |||||||||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgca 36096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 36756275 - 36756369
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||||||||||| |||||||||||||  | |||||| |||  |||  |||  |||||  |||||||| |||| ||| |||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactg 36756369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 2438762 - 2438831
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||||||||||||  |||||||||||| || ||| | | | ||||||||||||| |||||||||||    
T  2438762 aaattattagctgtgtcagc--gtcagtgtccgtgttttgtccggtg-tcgtgtccgtatccgtgcttcatag 2438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 6940271 - 6940238
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  6940271 aaattattagctgtgtcggcgtgtcagtgtccgt 6940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 10535684 - 10535721
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  10535684 tctatgaagcacgaacactcctcggattaggcgtgtcc 10535721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24894405 - 24894372
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  24894405 aaattattagctgtgtcggcgtgtcagtgtccgt 24894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 31285709 - 31285746
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  31285709 atctataaagcacagacactcctcggattaggtgtgtc 31285746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 34221463 - 34221500
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| || |||||||||||||||||||||||    
T  34221463 ctatgaagcacggaaactcctcggattaggcgtgtccc 34221500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 34785030 - 34785099
Alignment:
Q  345 attagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggt 414  Q
    ||||| |||||| | |||||||||||||| | ||||   | || ||||||||||||||||||||||||||    
T  34785030 attagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcataggt 34785099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 37558993 - 37558960
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  37558993 aaattattagctgtgtcggcgtgtcagtgtccgt 37558960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 44635612 - 44635567
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    ||||||||||| |||||||||| ||||||||||||| | |||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcgt 44635567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||  |||||||||||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 23354582 - 23354618
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtccc 23354618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 24339774 - 24339676
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||| | || |||| |||| ||||||||||||||| |||| |||||||||||||||    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactg 24339676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 26033392 - 26033486
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||| ||| |||||||||||||||||| ||||| | || ||| |||| ||||||||||||||||||||||| | |||| |||||||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactg 26033486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 598327 - 598256
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||| |||| |||| ||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 32287404 - 32287474
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| |||||||||||||||||| ||||||| |||||| |||| ||||||||| |||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacac 32287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 7438836 - 7438743
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| ||||||||| | ||||||||||||| ||||||| |||  |||| ||| ||||||||||| |||| |||| ||||||||||||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattaca 7438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 371
Target Start/End: Original strand, 5409771 - 5409910
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||| |||| |||      ||||||||||| |||| ||||||||| ||||| |     
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaat 5409864  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtcc 371  Q
       ||||       |||||||||||||| |||||||||||||||||    
T  5409865 tatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||| |||| |||| ||||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 2334379 - 2334285
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||||| ||| ||||||||||||||||| |||||  |||||||| |||  |||| |||| |||| |||||||||| |||| ||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacact 2334285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 21864927 - 21864856
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||| |||| |||| |||| |||| ||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 1433578 - 1433513
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    ||||||||||| ||||||||||||||||| |||||||  |||||| ||||||||| |||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 283
Target Start/End: Complemental strand, 24105797 - 24105744
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgt 283  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgt 24105744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 40131939 - 40131988
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacac 40131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 21880272 - 21880200
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||| |||||| ||||||||||||||||||  |||||| |||  |||| |||| |||||||||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 5835366 - 5835295
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| ||||| | ||||| ||||||||| ||||||||| || ||  ||||||||||||||||||||||||||    
T  5835366 ctataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacac 5835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 15680928 - 15680857
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||||||||| ||||| |||||| | |||||| |||| |||| |||| |||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 18212973 - 18213016
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtc 18213016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||| ||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 232 - 325
Target Start/End: Original strand, 9408265 - 9408358
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||||||| |||| || |||||||||||||||    |||||| | | || || ||||||||||||| |||||| |||| ||||||||||||||    
T  9408265 atgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacact 9408358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 9778624 - 9778575
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||| ||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 12010023 - 12010056
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||||||||||||||||||||    
T  12010023 aaattattagctgtgtcagcgtgtcagtgtccgt 12010056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 23128603 - 23128636
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtg 263  Q
    ||||||||||||||||||||||||||||||||||    
T  23128603 ctatgaagcacagacactcctcggattaggcgtg 23128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 38134335 - 38134372
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||||||||| |||||||||||||||||||||||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtccc 38134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 38804488 - 38804565
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc-atgtctgacaccgacacgaca 305  Q
    ||||||||||||| |||||||||||||||||| |||||| | |||| ||||| |||  |||| |||||| ||||||||    
T  38804488 tctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacacgaca 38804565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 1433470 - 1433394
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtta 416  Q
    ||||||||| | ||||| |||||||| ||||||| | |||||| | || |||| ||||||| |||||||||||||||    
T  1433470 aaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcataggtta 1433394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 3991432 - 3991392
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagt 270  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagt 3991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 11272531 - 11272567
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11272531 tatgaagcacagatactcctcggattaggcgtgtccc 11272567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 25822785 - 25822689
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||| ||| |||||||||  |||||||| ||||||  ||||  |||| |||| |||| || ||||| |||||| |||| |||||||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactg 25822689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 29763129 - 29763165
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcc 29763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 5307378 - 5307331
Alignment:
Q  227 tatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||||  |||||||| ||||||||||||||| |||||||    
T  5307378 tatctatgaagcacgtacactccttggattaggcgtgtcctagtgtcg 5307331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 17852119 - 17852060
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtc 289  Q
    ||||||||||| ||||||||||| |||||| ||||| | |||||| |||| |||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtc 17852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 23752020 - 23751981
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  23752020 atctatgaagcacagacacttatcggattaggcgtgtccc 23751981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 27229252 - 27229335
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    |||| |||||| ||||||||||||| ||||||| |||| | || |||||||||  ||||||||| |||  ||| ||||||||||    
T  27229252 gacattcctcgaattaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacact 27229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 8842282 - 8842324
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcgt 8842324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 14729827 - 14729773
Alignment:
Q  225 attatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||| |||||||| || |||||||||||||||| ||||||||| |||||| ||||    
T  14729827 attagctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 20549909 - 20549839
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| | |||||||||||||||||||||| || ||||| |||  |||  |||| |||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacac 20549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 264
Target Start/End: Complemental strand, 30813916 - 30813882
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgt 264  Q
    ||||||||||| |||||||||||||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 32093954 - 32094020
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgt-cccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||||||||  |||||||||||||||||||||| ||| |||||| |||| |||| |||| |||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 7133212 - 7133261
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| ||| |||||| ||||||| |||||||||||||| ||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacac 7133261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 18213082 - 18213151
Alignment:
Q  345 attagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggt 414  Q
    ||||| |||||| |||| ||||||||||| | ||||   | |||||||| ||||||||||||||||||||    
T  18213082 attagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgtgttcgtatctgtgcttcataggt 18213151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 21568559 - 21568604
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||||||||||||||||| ||||| || |||||| |||||    
T  21568559 atctatgaagcacagacactcctcagattaagcatgtcccggtgtc 21568604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 24105694 - 24105661
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  24105694 aaattattagctgtgtcggcgtgtcagtgtccgt 24105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 28973881 - 28973918
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  28973881 ctatgaagcacggacacacctcggattaggcgtgtccc 28973918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 29812598 - 29812635
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtccc 29812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 49107923 - 49107886
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtccca 268  Q
    |||||||||||||||||||||||||||||  |||||||    
T  49107923 tatgaagcacagacactcctcggattaggtatgtccca 49107886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 11272571 - 11272611
Alignment:
Q  286 tgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  11272571 tgtccgacaccgacacgacaccgacacttgtaattacactg 11272611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 11738151 - 11738223
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacg 302  Q
    ||||||| ||| |||||||||| ||||||||||||| |||||| | |||| | |||| || |||| |||||||    
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgtctcatttccgacagcgacacg 11738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 20545180 - 20545228
Alignment:
Q  226 ttatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    |||| |||||||||||||||||||||| ||||  |||||||| ||||||    
T  20545180 ttatatatgaagcacagacactcctcgaattaaacgtgtccccgtgtcg 20545228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 25481918 - 25481846
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||||||||| |||||||| ||||| | |||||| |   || |||||| ||||| |||||||||||    
T  25481918 aaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcatag 25481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 40287306 - 40287346
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||| ||||||||||||||||||| |||||| ||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcg 40287346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 6612112 - 6612291
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca----gtgannnnn 337  Q
    ||||||||| |||||||||||||||  |||||| |||||| || |||| |||| |||||||||| |||| ||||||||||||||| |    || |         
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T
Q  338 nnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggttat 417  Q
      ||||||||| |||| || |||||||| ||||||| | |||| | | ||||||||||||||||||||||||||||||||    
T  6612212 tcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatctgtgcttcataggttat 6612291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 412
Target Start/End: Original strand, 42359391 - 42359564
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca--- 328  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||| ||| |||| |||||||||||           |||||||||||||| |       
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac-----------ttgtaattacactgaattt 42359479  T
Q  329 -gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
     ||||       |||||||||| ||||||||||||||||||||||| |||||| | | ||||||||||||||| |||||||||||    
T  42359480 tgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcatag 42359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 230 - 373
Target Start/End: Complemental strand, 40917879 - 40917734
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||  |||||||||||||| |||  ||||||||||||||  |     
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat 40917780  T
Q  329 -gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
     ||||       ||||||||||||||||| |||||||||| |||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgt 40917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 47989627 - 47989531
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||  |||  |||| |||| ||||||||||||||| |||| |||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactg 47989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 232 - 373
Target Start/End: Original strand, 1486646 - 1486785
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca--- 328  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||      ||||||||||| |||| ||| ||||||||||| |       
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  329 -gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
     ||||       |||||||||||||||||||||||||||| |||||    
T  1486740 tgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgt 1486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 9828174 - 9828094
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgac 310  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| |||| |||| |||||||||| ||||||||| ||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgac 9828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 37598950 - 37598879
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||| |||| |||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 373
Target Start/End: Original strand, 18556385 - 18556532
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| | || ||||  ||||||||||| ||||||| | |  |||||||||||| |  |     
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
       ||||       ||||||||||||||||| ||||||||||||||||    
T  18556485 tatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgt 18556532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 21032335 - 21032245
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaatta 321  Q
    |||||||||||||||||||| ||||||||||| || |  ||||| ||||||||| |||| |||||| |||||||| ||||  |||||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaatta 21032245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 32461393 - 32461485
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| |||||| || ||||||||||||||||||||||  |||| |||| |||| ||||||||||| ||| | || ||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattaca 32461485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 31694639 - 31694735
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| |||||||||| |||||||||||| || |||||| | |  |||  |||| ||||||||||||||| |||| |||||||||| ||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactg 31694735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 18337448 - 18337377
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| |||| |||  |||| |||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 5944415 - 5944317
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||||  |||||||||||||||||||| |||| |||||| |||  |||  |||| | || |||||||||| |||| ||| |||||||||||    
T  5944415 atctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactg 5944317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 40258874 - 40258944
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||  |||||||||||||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacac 40258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 5898206 - 5898275
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgac 299  Q
    |||| |||||| ||||||||||||||||| |||||||| |||| | |||| |||| ||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 6427594 - 6427501
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| ||||||| || ||||||||||||||| |||||| |||| |||| |||| ||| || ||||||||  ||| |||||| |||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttaca 6427501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacacc 296  Q
    ||||||||| |||||||||||||||||||||||||  |||||| ||||| ||| |||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 22515822 - 22515898
Alignment:
Q  225 attatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| ||||||||||| |||||||||||||||||||||||| | |||||| | |  |||| |||| |||||||||||    
T  22515822 attaactatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 25934746 - 25934650
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||||||||| |||| |||||| |||| |||||  |||| |||| |||| ||||||||||||| | |||| | | |||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactg 25934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 15765877 - 15765834
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtc 15765834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 18190048 - 18190119
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||| || ||||||||||||||||| ||||||| |||||| |||| |||  ||||||||| ||||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacac 18190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 46348323 - 46348394
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||| ||||| |||||||| ||||||||| | |||||| |||| |||| |||| |||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 35702542 - 35702580
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccca 268  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtccca 35702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 398808 - 398881
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatagg 413  Q
    ||||||||||| ||||| |||||||||||||||| | |||| | | || || ||||||||| ||||||||||||    
T  398808 aaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcatagg 398881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 2218347 - 2218298
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||| ||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacac 2218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 22881567 - 22881612
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcgt 22881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 36878585 - 36878540
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcgt 36878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 6574096 - 6574052
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcg 6574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 13011259 - 13011331
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||||||||| || ||||||||| ||| | |||||| | || |||||| |||||||| ||||||||    
T  13011259 aaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatctgttcttcatag 13011331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 21365992 - 21366036
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcg 21366036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 22947849 - 22947813
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 30173691 - 30173787
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| || | || |||| |||||||||||| || |||| |||  |||| |||| || || ||||||||| |||| |||||||||||||||    
T  30173691 ctatgaagcacggatattcgtcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactg 30173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 1815376 - 1815305
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||| ||| | |||||||| ||||||||||||||| |||||| |||  |||| |||| |||||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 9630561 - 9630616
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtca 285  Q
    |||||||||||  ||||||||||||||||||||||||  |||| | ||||||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtcctcgtgttgaacacatgtca 9630616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 9690213 - 9690268
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtca 285  Q
    |||||||||||| ||||||  ||||||||||||||||| |||||| |||| |||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtca 9690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 10577783 - 10577850
Alignment:
Q  345 attagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    |||||||||||| ||||||| |||||||| | |||| | | || |||||||||||| |||||||||||    
T  10577783 attagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||  |||||||||||||||||||||||||| |||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 48548016 - 48548079
Alignment:
Q  351 tgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggt 414  Q
    |||||| |||||||| ||||||| |||||| | | || |||||||||||| |||||||||||||    
T  48548016 tgtgtcggcgtgtcattgtccgtattgtgtccggtgtccgtgtccgtatccgtgcttcataggt 48548079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 2896073 - 2896131
Alignment:
Q  242 gacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    |||||| || |||||||| ||||||| || ||| ||||||||| |||||||||||||||    
T  2896073 gacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgaca 2896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 21038202 - 21038160
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgt 275  Q
    |||||||||||||||| || ||||||||||||| |||||||||    
T  21038202 tgaagcacagacactcatcagattaggcgtgtctcagtgtcgt 21038160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 16812675 - 16812638
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtccc 16812638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 17831460 - 17831537
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc-atgtctgacaccgacacgac 304  Q
    ||||||||| ||  |||||||||  ||||||||||||||| |||||| |||||||||  |||| ||||| ||||||||    
T  17831460 atctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgac 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 19562556 - 19562604
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| ||||    
T  19562556 ctatgaagcac-gacactcctcggattaggtgtgtccctgtgtcggacac 19562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 28663715 - 28663682
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgt 264  Q
    |||||||||||||||||||||| |||||||||||    
T  28663715 tatgaagcacagacactcctcgaattaggcgtgt 28663682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||| ||||||| ||||||||||||||| || |||||| ||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 34741965 - 34741928
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtccc 34741928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 42325678 - 42325641
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  42325678 ctatgaagcacagacactcctcgaattaggtgtgtccc 42325641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 46348426 - 46348459
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  46348426 aaattattagctgtgtcggcgtgtcagtgtccgt 46348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 46940748 - 46940797
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    |||||||||||  |||||||||||||||||||||| || |||||| ||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 48040418 - 48040463
Alignment:
Q  234 gaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||| ||||||||||  ||||||||||||||||||||| ||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacac 48040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 2896164 - 2896204
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgt 380  Q
    ||||||||||| ||||| |||||||||||||||| ||||||    
T  2896164 aaattattagcggtgtcggcgtgtcagtgtccgtgttgtgt 2896204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 7918154 - 7918190
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcc 7918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 21366063 - 21366135
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||||||| | ||||||| |||| ||| | |||||| | |||| |||||||||  |||||||||||    
T  21366063 aaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcatag 21366135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 26830701 - 26830641
Alignment:
Q  235 aagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||| |||||||||| ||||||||||||||| || ||| |||| |||  ||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 34712321 - 34712365
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgt 272  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||||    
T  34712321 atctatgaagcacggacactccttgaattagacgtgtcccagtgt 34712365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 38078600 - 38078672
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||  | ||||||||||||||||||||||  |||| | |||  |||| |||| |||||||||||    
T  38078600 tctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacac 38078672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 45534131 - 45534167
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  45534131 tatgaagcacaaacactcctcggataaggcgtgtccc 45534167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 48450550 - 48450586
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcc 48450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 30982808 - 30982903
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||| ||||||| | |||||||||||||||| |||||| |||| |||| |||||||||||||||||||| |||| ||| |||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactg 30982903  T

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Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 415
Target Start/End: Original strand, 23292926 - 23293104
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca- 328  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||| |||| |||| ||||||||||           |||||||||| |||| |     
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca-----------cttgtaattatactgaat 23293014  T
Q  329 ---gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtt 415  Q
       ||||       ||||||||||||||||| |||||||| ||||||| | |||| | | || |||||||||||||||||||||||||||    
T  23293015 tatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcataggtt 23293104  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 324
Target Start/End: Complemental strand, 19482798 - 19482704
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    |||||||||||  ||||||||||||||||| |||||||||||||| |||| |||| ||||  | |||||||||||| | || |||||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacac 19482704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 29205594 - 29205543
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  29205594 ttattatctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcg 29205543  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 24613630 - 24613723
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattaca 323  Q
    ||||||||||| ||||||||| ||||||| |||||||  |||||  |||| |||| ||||||||||||||| |||| |||| |||||| |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttaca 24613723  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||||||| |||||||||| |||||| ||||||||||||||| |||| |||| ||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 16184950 - 16184906
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcg 16184906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 28084640 - 28084588
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtca 285  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtca 28084588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 12895214 - 12895285
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||  |||||||||||||||||||||||||  ||||| | ||||||| |||| |||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 715543 - 715589
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  715543 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcg 715589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 752869 - 752915
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  752869 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcg 752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 21945623 - 21945551
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||| |||||| ||||||||||||||||||||||||  | |||||| |||  ||||||||| |||||||||||    
T  21945623 tctaagaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacac 21945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 28964188 - 28964232
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcg 28964232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 47264118 - 47264022
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacac 324  Q
    ||||||||||||||||| ||| |||||||||||||||||  |||||  |||  |||| | ||||||||| ||| |||| ||||  ||||||||||||    
T  47264118 atctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacac 47264022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 5922532 - 5922575
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcg 5922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 17425348 - 17425383
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||||||||||||||||||||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtcc 17425383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 22440559 - 22440606
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 36635451 - 36635384
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||  || | |||| ||||||||||    
T  36635451 atctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac 36635384  T

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Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 40224438 - 40224509
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||||| | |||||||||||||| ||||||||| ||||| | |||| |||||||  ||||||||||    
T  40224438 ctatgaagcacacatactcctcggattagacgtgtcccaatgtcggaaacatatcatgtccaacaccgacac 40224509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 53381530 - 53381605
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtca-tgtctgacaccgacacgac 304  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||| | ||  |||| |||| ||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacacgac 53381605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 5414101 - 5414199
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    ||||||||||| ||||||||| |||| ||| ||||||| |||||  |||| |||| |||| ||||| ||||||||| |||  | | |||||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgca 5414199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 24343634 - 24343556
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc-atgtctgacaccgacacgaca 305  Q
    ||||||||||||| |||||||||| || |||||||||||| |||||| ||||  |||  |||| |||||||||||||||    
T  24343634 atctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgaca 24343556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 5775304 - 5775341
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtccc 5775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 49431147 - 49431074
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||| |||||  |||||||||||||| ||||||||||| |||| | |||| |||| |||| |||||||||||    
T  49431147 atctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 3064868 - 3064912
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcg 3064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacac 295  Q
    |||||||||| |||||||||||||||||| ||||||  |||||| |||| |||| |||| |||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 22234819 - 22234899
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgac 310  Q
    |||||||||||  ||||| ||||||||||  ||||||  |||||| |||| |||| |||| ||||||||||||||| ||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgac 22234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 34306743 - 34306815
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||  ||| ||||| ||||||||||||| | |||||| |||| |||| |||| |||||||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 37203379 - 37203327
Alignment:
Q  222 gttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||| ||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  37203379 gttatgatctatgaagcacggacacttctcggattagacgtgtcccggtgtcg 37203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 4383484 - 4383449
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    |||||||||| |||||||||||||||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 16073513 - 16073442
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||  ||||||||||||||||||||||||  ||||||| |||  | || |||| |||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacac 16073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 40784072 - 40784029
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 8423658 - 8423728
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgaca 300  Q
    |||||| |||| |||||| ||| ||||||||||||||| |||||| |||  |||| |||| ||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| |||||||||||||| ||| |||| || ||| |  |||| ||||||||| |||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 280
Target Start/End: Original strand, 18513175 - 18513225
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacaca 280  Q
    ||||||||||| |||||||||| ||||||||||||||  |||||| |||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacaca 18513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 28470485 - 28470447
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  28470485 tctatgaagcacggacactcctcggattaggcatgtccc 28470447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 30838335 - 30838245
Alignment:
Q  235 aagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    |||||| |||||||||||| |||||||||||   |||||| |||| ||||  ||| ||||| ||||||||| |||  ||| ||||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacact 30838245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 42640645 - 42640607
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  42640645 atctatgaagcacggaaactcctcggattaggcgtgtcc 42640607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 4157266 - 4157197
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||||||||||| |||||| || || | |||||| |||  |||| |||| |||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 4157553 - 4157484
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||| |||||||||||| ||||||||| || | |||||| |||  |||| |||| |||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 4672025 - 4672074
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacac 279  Q
    ||||||||||||||||||||| ||||||| | ||| ||||||||| ||||    
T  4672025 ctatgaagcacagacactccttggattagacatgttccagtgtcgaacac 4672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 11596297 - 11596334
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtccc 11596334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 30298962 - 30298929
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  30298962 aaattattagctgtgtcggcgtgtcagtgtccgt 30298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 30299048 - 30299011
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtccc 30299011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 30327830 - 30327797
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  30327830 aaattattagctgtgtcggcgtgtcagtgtccgt 30327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 30327916 - 30327879
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtccc 267  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtccc 30327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 10499225 - 10499261
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgt 264  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  10499225 atctatgaagcacggacaatcctcggattaggcgtgt 10499261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 15724483 - 15724563
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgac 310  Q
    |||||||||||| | ||||||||||||||||||||    |||||  |||| |||  |||| ||||||||||||||| ||||    
T  15724483 ctatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac 15724563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 17876285 - 17876249
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcc 17876249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 18844423 - 18844459
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtcc 18844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 20633501 - 20633429
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatag 412  Q
    ||||||||||| |||||  ||||||||||||||| | ||||   | || |||||||||||| |||||||||||    
T  20633501 aaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 30621752 - 30621788
Alignment:
Q  229 tctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30621752 tctatgaagcacaaatactcctcggattaggcgtgtc 30621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 400
Target Start/End: Original strand, 35158028 - 35158088
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatc 400  Q
    |||||||||| || ||| |||||||||||||||| |||||| | | || ||||||||||||    
T  35158028 aaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatc 35158088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 373
Target Start/End: Complemental strand, 241726 - 241577
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgc 327  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||| |||| |||| |||| |||||| |||||||| |||| ||  ||||||||||      
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaa 241627  T
Q  328 a----gtgannnnnnnaaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    |    ||||       ||||||||||||||||| ||||||||||||||||    
T  241626 attatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 236914 - 236957
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtc 236957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 71855 - 71759
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| |||| |||  |||| |||||||||||||||  ||| || ||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactg 71759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 230 - 325
Target Start/End: Complemental strand, 3058 - 2963
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacact 325  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||| |||| |||| ||||||| ||||||||||||  ||  ||||||||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacact 2963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 8562 - 8655
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaatta 321  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||| |||| | || |||| || |||||||||||| ||||  |||||||||    
T  8562 atctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaatta 8655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 4976 - 5047
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||||||||||||||||||||| |||| || ||||| |||| |||| |||| |||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacac 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 263303 - 263397
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||| ||| ||||||||||||||||||||||||   || ||| |||| |||| ||||||||||||||||||||  ||| ||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactg 263397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 23641 - 23545
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||||||||||| ||||| || |||||| |||||||||||| ||| |||||| || |||| |||||||| ||||||  ||| ||| |||||||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactg 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 3778 - 3874
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||||  |||||||||||||||||||||||| |  ||||| |||  |||| |||| |||||| ||||||||  ||| |||||||||||||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactg 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 3427 - 3384
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtc 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 8814 - 8739
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggtt 415  Q
    ||||||||||||||||| |||||||||||||||| | |||| | | || ||||||||||||  |||||||||||||    
T  8814 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcataggtt 8739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 8919 - 8846
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||||||| || ||||||| ||||||||||||| | |||||| |||| |||| |||| |||||||||||    
T  8919 atctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 4819 - 4865
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtcg 274  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  4819 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcg 4865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 403 - 473
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||||||| |||||||||||||||||| ||||||| |||||| ||||  ||| |||| |||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 505 - 575
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcat 410  Q
    ||||||||||| ||||| |||| |||||||||||   |||||| | || |||||||||||| |||||||||    
T  505 aaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 53303 - 53214
Alignment:
Q  237 gcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    |||| |||||| || ||||||  |||||||| |||||| |||| ||||||||| |||||||||||| || |||| ||| |||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactg 53214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 44447 - 44550
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattac 322  Q
    |||| |||||||||||||||||||| ||| |||||  | ||||||||||||| |||| |||  ||||  |||||||||||| | |||| | | |||||||    
T  44447 ttatcatctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattac 44546  T
Q  323 actg 326  Q
    ||||    
T  44547 actg 44550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 8720 - 8666
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtc 284  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||| |||| ||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtc 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 13543 - 13469
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgac 304  Q
    |||||||| || |||||||||||||||||| || ||||  ||||||| || |||| |||| ||||||||||||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgac 13469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 24155 - 24079
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacaca--tgtcatgtctgacaccgacacgaca 305  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||| |||||  |||  |||| |||||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgaca 24079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 9678 - 9772
Alignment:
Q  232 atgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactg 326  Q
    ||||||||| ||||||||||||||||  ||||||||  ||||  |||  |||| ||||||||||| |||||||| |||| | | |||||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactg 9772  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 15092 - 15047
Alignment:
Q  228 atctatgaagcacagacactcctcggattaggcgtgtcccagtgtc 273  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||    
T  15092 atctatgaagcacaaacactcctcggataaggcgtgtccccgtgtc 15047  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 21407 - 21372
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    |||||||||||||||||| |||||||||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtc 21372  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 9909 - 9834
Alignment:
Q  345 attagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcataggttattat 420  Q
    |||||||||||| ||||||| |||||| | | |||| | | || |||||||||||| |||||||||||||| ||||    
T  9909 attagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcataggtttttat 9834  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 265
Target Start/End: Complemental strand, 46776 - 46741
Alignment:
Q  230 ctatgaagcacagacactcctcggattaggcgtgtc 265  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtc 46741  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 46698 - 46625
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgttttgtgttcagcgttcgtgtccgtatctgtgcttcatagg 413  Q
    ||||||||| ||||||| |||||||| ||||||| | |||| |   || |||||||||||| ||||||||||||    
T  46698 aaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatagg 46625  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 92940 - 92905
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcc 266  Q
    |||||||||| |||||||||||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtcc 92905  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 13532 - 13454
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||| | ||||||||| ||||||||| |||||||| |||||| ||||||  || | |||| |||| |||||||||||    
T  13532 ttattaccaatgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0152 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 21795 - 21873
Alignment:
Q  223 ttattatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    |||||| | ||||||||| ||||||||| |||||||| |||||| ||||||  || | |||| |||| |||||||||||    
T  21795 ttattaccaatgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 32822 - 32772
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacat 281  Q
    |||||||||| |||||||||||||||| | ||||||| |||||| ||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacacat 32772  T

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Target: scaffold0623 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 328
Target Start/End: Original strand, 5926 - 6023
Alignment:
Q  231 tatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgacaacgacgcttgtaattacactgca 328  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||  |||| |||| |||  |||||||| |||||| |||| | | |||||||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgca 6023  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 51827 - 51794
Alignment:
Q  340 aaattattagctgtgtcagcgtgtcagtgtccgt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  51827 aaattattagctgtgtcggcgtgtcagtgtccgt 51794  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 17539 - 17616
Alignment:
Q  227 tatctatgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacacgac 304  Q
    |||||||||||||| || ||||  | ||||||||||||||| |||||| ||| || |  ||||| |||||||||||||    
T  17539 tatctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacatatattgtgtctaacaccgacacgac 17616  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 70394 - 70326
Alignment:
Q  233 tgaagcacagacactcctcggattaggcgtgtcccagtgtcgtacacatgtcatgtctgacaccgacac 301  Q
    ||||||||  |||||| ||||||||||| |||||  |||||| |||| |||| |||| |||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacac 70326  T

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