View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15573_low_11 (Length: 343)
Name: NF15573_low_11
Description: NF15573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15573_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 330
Target Start/End: Original strand, 47122511 - 47122823
Alignment:
| Q |
18 |
aaaaatacatttttaagtccctaaacaagtgattaaaagtatattatttgtattctgtagtgtccatatacttctctgactcaaatatcatcctccggat |
117 |
Q |
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| T |
47122511 |
aaaaatacatttttaagtccttaaacgagtgactaaaagtatattatttgtattatgtagtgtccatatacttctctgactccaatgtcatcctccggat |
47122610 |
T |
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| Q |
118 |
aaatttatataatcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47122611 |
aaatttatataatcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagc |
47122710 |
T |
|
| Q |
218 |
ctaagtacttataatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaagctacatttgctaatttatctttaaaata |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
47122711 |
ctaagtacttataatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaagctacatttgctaatttatctttaatata |
47122810 |
T |
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| Q |
318 |
catgtttcatctc |
330 |
Q |
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||||||||||||| |
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| T |
47122811 |
catgtttcatctc |
47122823 |
T |
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