View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15573_low_16 (Length: 295)
Name: NF15573_low_16
Description: NF15573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15573_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 20 - 289
Target Start/End: Original strand, 4601021 - 4601290
Alignment:
| Q |
20 |
taaaacactttgaggtctctgagtctgcattgcaagttcgcaaccaaaatttcaattgcatcggccgcattttcccacatttttccgtaatataatggtt |
119 |
Q |
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| T |
4601021 |
taaaacactttgaggtctctgagtctgcattgcaagttcgcaaccaaaatttcaattgcatcggccgcattttcccacatttttccgtaatataatggtt |
4601120 |
T |
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| Q |
120 |
catagcatgtaaagattacactgactaaaataactcgattaaaattaagtcggacaaaactcaacgcggctgttcaaaatctcacaaactttagttcaac |
219 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
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| T |
4601121 |
catagcatgtaaagattacactaactaaaataactcgattaaaattaagtcggacataactcaacgcggctgttcaaaatctcacaaacttcagttcaac |
4601220 |
T |
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| Q |
220 |
atgtaatataggatttatgtgaaatctaccaaaacagattcttacccaacagaaaatcagcctatgcttc |
289 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4601221 |
atgtaatataggatttaggtgaaatctaccaaaacagattcttacccaacagaaaatcagcctatgcttc |
4601290 |
T |
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