View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15574_high_15 (Length: 240)
Name: NF15574_high_15
Description: NF15574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15574_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 32551654 - 32551872
Alignment:
| Q |
8 |
tgagatgaatcagactcggaagccgtagaaatggaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgta |
107 |
Q |
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| T |
32551654 |
tgagaagaatcagactcggaagccgtagaaatggaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgta |
32551753 |
T |
|
| Q |
108 |
ttcatctctgaaatttgttgagatttgttatcaatagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacaca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551754 |
ttcatctctgaaatttgttgagatttgttatcaatagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacaca |
32551853 |
T |
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| Q |
208 |
gttagttatagttcttact |
226 |
Q |
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||||||||||||||||||| |
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| T |
32551854 |
gttagttatagttcttact |
32551872 |
T |
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