View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15574_low_11 (Length: 259)
Name: NF15574_low_11
Description: NF15574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15574_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 1640525 - 1640775
Alignment:
| Q |
1 |
tttaattcaagttgcaactggagcttactacatccctgagttgaagaataacctcctgagtataggatagcttaaataaaagaatttaactatagttttc |
100 |
Q |
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| T |
1640525 |
tttaattcaagttgcaactggagcttactacatccctgagttgaagaataacctcctgagtataggataacttaaataaaagaatttaactatagttttc |
1640624 |
T |
|
| Q |
101 |
aagaggatttgacaacacatgcaaaggaggaatggcacttaaaataccaccagaccaaaatttgttattcaactttttgtgcaattttcaggactcaaca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
1640625 |
aagaggatttgacaacacatgcaaaggaggaatggcacttaaaataccaccagaccaaaatttgttattcaactttttgtgcaattttcaggactcagca |
1640724 |
T |
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| Q |
201 |
cttctacgtaaatgaatattcatgtatggctcttgttgtgggactattgtc |
251 |
Q |
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|||||| |||||||||||||||||| |||||||||||||||| |||||||| |
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| T |
1640725 |
cttctatgtaaatgaatattcatgtttggctcttgttgtgggtctattgtc |
1640775 |
T |
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