View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15575_high_36 (Length: 243)
Name: NF15575_high_36
Description: NF15575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15575_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 22034409 - 22034639
Alignment:
| Q |
5 |
cttcctaatatattaaagtagcatttgacacactacctctcattgatgtatgaacatgtatgctggcaatttaagtatctaaagaaacatttcaccaaac |
104 |
Q |
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| T |
22034409 |
cttcctaatatattaaagtagcatttgacacactacctctcattgatgtataaacatgtatgctggcaatttaagtttctaaagaaacatttcaccaaac |
22034508 |
T |
|
| Q |
105 |
ttcaaaggnnnnnnnccctttcatgattccatatatttcccatcctccatcactcccacatgcatcaaagtagtcacttcaaggaccgcccttccatttt |
204 |
Q |
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|||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||| |
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| T |
22034509 |
ttcaaaggaaaaaaaccctttcatgattccatatatttcccaccctccatcactcctacatgcatcaaagcattcacttcaaggaccacccttccatttt |
22034608 |
T |
|
| Q |
205 |
caacccctttctacaaaatatgttgatgatg |
235 |
Q |
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|||| ||||||||||||||||| |||||||| |
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| T |
22034609 |
caactcctttctacaaaatatggtgatgatg |
22034639 |
T |
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