View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15576_high_6 (Length: 270)
Name: NF15576_high_6
Description: NF15576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15576_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 37421279 - 37421032
Alignment:
| Q |
1 |
gaacatatggttctcataccaagcattaagaatatcccttcagagacccgagcctctagaaacaatccttccacaccacttatcgagtagtgcaaggttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
37421279 |
gaacatatggttctcataccaagcattaagaatatcccttcataaacccgagcctctataaacaatccttccacaccacttatcgagtagtgcaaggttc |
37421180 |
T |
|
| Q |
101 |
accaagcgctgatccctcatcccccggaccacctctactctttgcgttgaagacctccaaccacataacccaagcaattttgatcggcttttgtatttta |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37421179 |
accaagcgctgatccctcatcccccgaaccacctctactctttgcgttgaagacctccaaccacataacccaagcaattttgatcggcttttgtatttta |
37421080 |
T |
|
| Q |
201 |
atttctaaactctctacatgtggaattttgtccaagacttgagtgtct |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37421079 |
atttctaaactctctacatgtggaattttgtccaagacttgagtgtct |
37421032 |
T |
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