View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15577_low_15 (Length: 225)
Name: NF15577_low_15
Description: NF15577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15577_low_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 43316664 - 43316440
Alignment:
| Q |
1 |
tttatgcatgcatcagtttcaaattaaaatccactatcactaataagtttattaagatcactaagcaaatcacgtgtcatattaattttgagcaccccta |
100 |
Q |
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| T |
43316664 |
tttatgcatgcatcagtttcaaattaaaatccaatatcactaataagtttattaagatcactaagcaaatcacgtgtcatattaattttgagcaccccta |
43316565 |
T |
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| Q |
101 |
ggagtcaaacaaaaccattggaaattgcattatttgacatgaaaattccattgatcggttcttcctaaccccatttggaaaggtccttttcaacaagtat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43316564 |
ggagtcaaacaaaaccattggaaattgcattatttgacatgaaaattccattgatcggttcttcctaaccccatttggaaaggtccttttcaacaagtat |
43316465 |
T |
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| Q |
201 |
tgtttcagaacaaatgaatcatctt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
43316464 |
tgtttcagaacaaatgaatcatctt |
43316440 |
T |
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