View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15578_low_10 (Length: 259)
Name: NF15578_low_10
Description: NF15578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15578_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 31045700 - 31045958
Alignment:
| Q |
1 |
acttagtaacacactagtgttaacccttaaagaaaatcaaacttgtactaactaacatagctttcatagag-----------aaacctcaagcataactc |
89 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
31045700 |
acttagtaacacactagtgttaacccttaaagaaaatcaaacttgtactaactaacatagctttcatagagatccataagagaaacctcaagcataactc |
31045799 |
T |
|
| Q |
90 |
attcagggtccatcattcctgtcatccacaaactctcccaccacatgggtgcctgaatgagtcacatgtcacatgttatgctaaatctaaatgagaatct |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31045800 |
attcagggtccatcattcctgtcatccacaaactctcccaccacatgggtgcctgaatgagtcacatgtcacatgttatgctaaatctaaatgagaatct |
31045899 |
T |
|
| Q |
190 |
gagatgatagcaatctttaactcaaaagcctgtctttagaacctatggccacaattcat |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31045900 |
gagatgatagcaatctttaactcaaaagcctgtctttagaacctatggccacaattcat |
31045958 |
T |
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