View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1558-INSERTION-2 (Length: 169)
Name: NF1558-INSERTION-2
Description: NF1558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1558-INSERTION-2 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 9e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 9e-87
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 53538093 - 53537932
Alignment:
| Q |
8 |
attcattcgcatcaagcatccttttcgatcttcacacatttcagcttcacaggtttgttaatagacatttcaccatcatctttgtagtcgacaatatcac |
107 |
Q |
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| T |
53538093 |
attcattcgcatcaagcatccttttcgatcttcacacatttcagcttcacaggtttgttaatagacatttcaccatcatctttgtagtcgacaatatcac |
53537994 |
T |
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| Q |
108 |
aatcatccaaatcagcagacctctttccagaccccttgctacatggtgtattctgctcttca |
169 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53537993 |
aatcatccaaatcagcagacctctttccagaccccttgctacatggtgtattctgctcttca |
53537932 |
T |
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