View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15583_low_3 (Length: 319)
Name: NF15583_low_3
Description: NF15583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15583_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 301
Target Start/End: Original strand, 35288448 - 35288732
Alignment:
| Q |
17 |
attaacaagtgtggttgttttgttcataaccacataattctcatgttatatagttagttagtgaaccttgtttcatctcattcattgatagagttttttg |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35288448 |
attaacaagtgtggttgttttgttcataaccacataattctcatgttatatagttagttagtgaaccttgtttcatctcattcattgatagagtcttttg |
35288547 |
T |
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| Q |
117 |
ctctttgttgttatttgtcattttaggtgaatatgctacgagagaggaacacgagttatggcaccatcaagtttgttgatataggctcagatgattactc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35288548 |
ctctttgttgttatttgtcattttaggtgaatatgctacgagagaggaacacgagttatggcaccatcaagtttgttgatataggctcagatgattactc |
35288647 |
T |
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| Q |
217 |
tcccgacgagaatcagggcctcgactatcaaactgttagtcccttctctatggcctcgaagctgatttatttatttttggtttca |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35288648 |
tcccgacgagaatcagggcctcgactatcaaactgttagtcccttctctatggcctcgaagctgatttatttatttttgctttca |
35288732 |
T |
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