View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15583_low_4 (Length: 314)
Name: NF15583_low_4
Description: NF15583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15583_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 31015912 - 31016207
Alignment:
| Q |
1 |
tttggagagaaacactaaagagagtaatgtgtactcaatatctaactatgtgatttcttcaaataatggttcatactggatcactaggcatgagtataat |
100 |
Q |
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| T |
31015912 |
tttggagagaaacactaaagagagtaatgtgtactcaatatctaactatgtgatttcttcaaataatggttcatactggatcactaggcatgagtataat |
31016011 |
T |
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| Q |
101 |
ctgaatttttagttcgacacatgttaagatttatgcttcaaaaatattttcatcaaacatttatatctatctaatctcaatatagtgacacatattacag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
31016012 |
ctgaatttttagttcgacacatgttaagatttatgcttcaaaaatattttcatcaaacatttatatctatctaatttcaatatagtgacacatattacag |
31016111 |
T |
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| Q |
201 |
gacagagaaatgctaattttgttgaatgagtcccaccattttatgctagacacattttcatccaataagttgaagattgtatcaaaaagagtcaag |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31016112 |
gacagagaaatgctaattttgttgaatgagtcccaccattttatactagacacattttcatccaataagttgaagattgtatcaaaaagagtcaag |
31016207 |
T |
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