View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15584_high_14 (Length: 337)
Name: NF15584_high_14
Description: NF15584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15584_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 27190923 - 27190687
Alignment:
| Q |
9 |
agcagagacgacacaaatctgaataaaaagtcgaagtgaaaaattcatgattcaaatccaaacttcaaaagccatacagaaaatcatgacccatttctca |
108 |
Q |
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| T |
27190923 |
agcacagacgacacaaacctgaataaaaagtcgaagtgaaaaattcatgattcaaatctaaacttcaaaagccatacagaaaatcatgaaccatttctca |
27190824 |
T |
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| Q |
109 |
cataacatcagagttcataatcacgaaaatgtaaaatcaaatgaaaaacctattagtaacttgatttgtcactcactgtctatatatatcacaaagctct |
208 |
Q |
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|||||| ||| |||| |||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||| |
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| T |
27190823 |
cataacttcatagttggtaatcatgaaaatgtaaaatcaaatgaaaaactgaatagtaactttatttgtcactcactctctatatatatcacaaagctct |
27190724 |
T |
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| Q |
209 |
gctttaaagacctcatcctcctttttcacaccatacc |
245 |
Q |
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| T |
27190723 |
gctttaaagacctcatcctcctttttcacaccatacc |
27190687 |
T |
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