View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15586_high_2 (Length: 325)
Name: NF15586_high_2
Description: NF15586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15586_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 1811106 - 1810806
Alignment:
| Q |
6 |
agtgagaagaatccctcggtgctgcacccttacacgtcctatgctcggaaaagtctctaattgaatcacatcaagcaaaaaa-cacacgctttatcagta |
104 |
Q |
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| T |
1811106 |
agtgagaagaatccctcggtgctgcacccttacacgtcctatgctcggaaaagtttctaattgaatcacatcaagcaaaaaaacacacgctttatcagta |
1811007 |
T |
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| Q |
105 |
agaacttgacatgagggtcctcaatggggaattgtgacaaacaggtggcgagcaaaaacataccagggcattcaagaggagaaccgctgacattaatccg |
204 |
Q |
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| T |
1811006 |
agaacttgacatgagggtcctcaatggggaattgtgacaaacaggtggcgagcaaaaacataccagggcattcaagaggagaaccgctgacattaatccg |
1810907 |
T |
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| Q |
205 |
aacgtgaatgtgctttttctcaaccacattattcttatcatcagcagccatatctcttaacacaactctctaccaacagccaaaacaaaaatagaagtca |
304 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
1810906 |
aacgtgaatgtgctttttctcaaccatattattcttatcatcagcagccatatctcttaacacaactctctaccaacagccaaaacaaaaatacaagtca |
1810807 |
T |
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| Q |
305 |
a |
305 |
Q |
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| T |
1810806 |
a |
1810806 |
T |
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