View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15587_high_4 (Length: 526)

Name: NF15587_high_4
Description: NF15587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15587_high_4
NF15587_high_4
[»] chr3 (24 HSPs)
chr3 (10-510)||(27782743-27783243)
chr3 (378-425)||(4155377-4155424)
chr3 (371-431)||(16239636-16239697)
chr3 (378-421)||(1723064-1723107)
chr3 (378-421)||(54567945-54567988)
chr3 (327-425)||(16926933-16927036)
chr3 (378-419)||(20327839-20327880)
chr3 (371-415)||(27086635-27086680)
chr3 (371-431)||(33640090-33640151)
chr3 (327-419)||(35038418-35038515)
chr3 (378-421)||(11589838-11589881)
chr3 (329-424)||(17001406-17001506)
chr3 (378-421)||(17638287-17638330)
chr3 (378-421)||(21833401-21833444)
chr3 (329-420)||(22729099-22729195)
chr3 (378-421)||(54368569-54368612)
chr3 (327-356)||(16239588-16239617)
chr3 (329-358)||(39269330-39269359)
chr3 (330-358)||(472116-472144)
chr3 (371-426)||(1800070-1800126)
chr3 (378-418)||(12930119-12930159)
chr3 (381-425)||(40765920-40765964)
chr3 (378-426)||(45138954-45139002)
chr3 (378-410)||(50083079-50083111)
[»] chr5 (21 HSPs)
chr5 (329-421)||(2063722-2063818)
chr5 (329-421)||(24528539-24528636)
chr5 (327-431)||(41666971-41667080)
chr5 (378-421)||(8081101-8081144)
chr5 (370-417)||(13296717-13296764)
chr5 (327-360)||(2061992-2062025)
chr5 (329-421)||(15480321-15480418)
chr5 (378-421)||(9368648-9368691)
chr5 (378-421)||(18333687-18333730)
chr5 (327-358)||(19705900-19705931)
chr5 (378-421)||(24531652-24531695)
chr5 (327-358)||(41666813-41666844)
chr5 (328-358)||(6413482-6413512)
chr5 (328-358)||(17352491-17352521)
chr5 (328-358)||(24531597-24531627)
chr5 (384-421)||(95489-95526)
chr5 (370-426)||(1564550-1564607)
chr5 (380-421)||(17016385-17016426)
chr5 (378-431)||(24346715-24346768)
chr5 (329-358)||(37782106-37782135)
chr5 (330-358)||(30770321-30770349)
[»] chr8 (29 HSPs)
chr8 (328-421)||(41790657-41790754)
chr8 (371-421)||(10884110-10884160)
chr8 (327-421)||(24532409-24532508)
chr8 (327-421)||(11232182-11232281)
chr8 (329-421)||(12317045-12317142)
chr8 (329-421)||(11232417-11232514)
chr8 (371-421)||(20301306-20301357)
chr8 (371-421)||(21087938-21087989)
chr8 (327-421)||(19256808-19256907)
chr8 (327-358)||(5932005-5932036)
chr8 (328-411)||(12688305-12688393)
chr8 (327-358)||(15042726-15042757)
chr8 (378-421)||(31197668-31197710)
chr8 (327-358)||(35682837-35682868)
chr8 (371-421)||(37001271-37001322)
chr8 (327-358)||(38447483-38447514)
chr8 (327-358)||(39052593-39052624)
chr8 (327-358)||(39052985-39053016)
chr8 (378-420)||(28213093-28213135)
chr8 (329-358)||(7669640-7669669)
chr8 (293-358)||(7729907-7729969)
chr8 (380-421)||(8084182-8084223)
chr8 (371-431)||(38476083-38476144)
chr8 (328-357)||(42584672-42584701)
chr8 (330-358)||(20301261-20301289)
chr8 (330-358)||(20301501-20301529)
chr8 (330-358)||(21087893-21087921)
chr8 (330-358)||(21088133-21088161)
chr8 (382-418)||(31079566-31079602)
[»] chr7 (30 HSPs)
chr7 (327-424)||(48243422-48243524)
chr7 (328-421)||(25620134-25620232)
chr7 (327-421)||(29469602-29469701)
chr7 (327-410)||(6634852-6634940)
chr7 (378-421)||(10882227-10882270)
chr7 (371-421)||(33996299-33996350)
chr7 (378-421)||(40121912-40121955)
chr7 (379-425)||(4886383-4886429)
chr7 (372-421)||(21821852-21821902)
chr7 (327-421)||(21861291-21861390)
chr7 (329-421)||(31257255-31257352)
chr7 (378-421)||(3038072-3038115)
chr7 (327-358)||(21861526-21861557)
chr7 (327-358)||(29469837-29469868)
chr7 (327-358)||(31485480-31485511)
chr7 (378-421)||(33834244-33834287)
chr7 (327-410)||(34027624-34027712)
chr7 (327-358)||(36277282-36277313)
chr7 (327-358)||(43688215-43688246)
chr7 (329-431)||(26239894-26240001)
chr7 (329-358)||(2404230-2404259)
chr7 (329-358)||(3520096-3520125)
chr7 (329-358)||(4454775-4454804)
chr7 (370-426)||(5871795-5871852)
chr7 (327-360)||(26562127-26562160)
chr7 (378-411)||(36993072-36993105)
chr7 (329-358)||(48243117-48243146)
chr7 (378-410)||(7786253-7786285)
chr7 (330-358)||(35308202-35308230)
chr7 (381-421)||(36993296-36993336)
[»] chr1 (32 HSPs)
chr1 (334-421)||(4098391-4098482)
chr1 (330-421)||(38668125-38668221)
chr1 (378-421)||(25145708-25145751)
chr1 (378-421)||(29266006-29266049)
chr1 (378-421)||(35772082-35772125)
chr1 (327-417)||(4112998-4113093)
chr1 (329-422)||(3169765-3169863)
chr1 (378-431)||(39348331-39348383)
chr1 (370-421)||(30369879-30369931)
chr1 (327-411)||(35772261-35772350)
chr1 (327-358)||(2859448-2859479)
chr1 (378-425)||(8870894-8870941)
chr1 (327-358)||(15986389-15986420)
chr1 (378-421)||(33156786-33156829)
chr1 (378-421)||(51589859-51589902)
chr1 (378-420)||(2120130-2120172)
chr1 (330-360)||(16163167-16163197)
chr1 (327-421)||(17452816-17452915)
chr1 (378-424)||(35892344-35892390)
chr1 (328-358)||(40079150-40079180)
chr1 (370-426)||(11524826-11524883)
chr1 (329-358)||(20208582-20208611)
chr1 (293-354)||(21626399-21626457)
chr1 (329-358)||(25713392-25713421)
chr1 (329-358)||(26173280-26173309)
chr1 (378-411)||(33157274-33157307)
chr1 (330-358)||(8870745-8870773)
chr1 (371-426)||(11525042-11525098)
chr1 (329-357)||(26173513-26173541)
chr1 (330-358)||(38668360-38668388)
chr1 (381-425)||(38733207-38733251)
chr1 (370-421)||(51460430-51460482)
[»] chr6 (21 HSPs)
chr6 (327-431)||(9705017-9705126)
chr6 (378-431)||(4868791-4868844)
chr6 (377-426)||(8001533-8001582)
chr6 (327-421)||(13353198-13353297)
chr6 (327-421)||(33796323-33796422)
chr6 (378-422)||(20373623-20373667)
chr6 (327-358)||(4868633-4868664)
chr6 (378-421)||(8026442-8026485)
chr6 (371-421)||(12330167-12330218)
chr6 (371-421)||(27653262-27653313)
chr6 (378-421)||(30256631-30256674)
chr6 (378-421)||(30256865-30256908)
chr6 (327-358)||(31961175-31961206)
chr6 (378-420)||(3680065-3680107)
chr6 (371-420)||(15082133-15082183)
chr6 (328-410)||(16570157-16570244)
chr6 (378-420)||(33494592-33494634)
chr6 (329-358)||(3680245-3680274)
chr6 (329-358)||(6542999-6543028)
chr6 (365-424)||(10145735-10145795)
chr6 (371-414)||(11085626-11085670)
[»] chr2 (27 HSPs)
chr2 (327-421)||(27036403-27036499)
chr2 (378-421)||(5509132-5509175)
chr2 (327-431)||(5711653-5711762)
chr2 (378-425)||(15124767-15124814)
chr2 (371-421)||(28407781-28407832)
chr2 (378-421)||(40379432-40379475)
chr2 (378-420)||(93616-93658)
chr2 (369-426)||(33381174-33381232)
chr2 (327-421)||(14466398-14466497)
chr2 (371-431)||(21383648-21383709)
chr2 (378-422)||(10571023-10571067)
chr2 (378-421)||(93342-93385)
chr2 (378-421)||(2029822-2029865)
chr2 (327-358)||(5711495-5711526)
chr2 (328-411)||(14927100-14927188)
chr2 (378-421)||(16419320-16419363)
chr2 (327-358)||(16533544-16533575)
chr2 (327-358)||(17719397-17719428)
chr2 (378-425)||(21591835-21591882)
chr2 (378-425)||(27897590-27897637)
chr2 (365-426)||(5206737-5206799)
chr2 (328-358)||(37812554-37812584)
chr2 (329-358)||(16419501-16419530)
chr2 (329-358)||(17525394-17525423)
chr2 (330-421)||(32356386-32356481)
chr2 (327-355)||(93182-93210)
chr2 (381-421)||(40149224-40149264)
[»] chr4 (34 HSPs)
chr4 (378-425)||(12869247-12869294)
chr4 (378-424)||(17111616-17111662)
chr4 (328-426)||(52559565-52559668)
chr4 (379-421)||(52827413-52827455)
chr4 (378-431)||(35788712-35788765)
chr4 (378-421)||(22231296-22231339)
chr4 (378-421)||(40716609-40716652)
chr4 (378-421)||(40717429-40717472)
chr4 (284-358)||(44118915-44118986)
chr4 (378-426)||(24513343-24513391)
chr4 (370-425)||(35819112-35819168)
chr4 (378-421)||(1518217-1518260)
chr4 (327-358)||(9279224-9279255)
chr4 (371-421)||(9685443-9685494)
chr4 (327-358)||(11036802-11036833)
chr4 (378-421)||(14783175-14783218)
chr4 (327-358)||(22863471-22863502)
chr4 (378-421)||(25052905-25052948)
chr4 (327-358)||(27634137-27634168)
chr4 (327-358)||(28245582-28245613)
chr4 (327-358)||(31254463-31254494)
chr4 (378-421)||(35609699-35609742)
chr4 (327-358)||(35788656-35788687)
chr4 (327-358)||(35788891-35788922)
chr4 (327-358)||(39902619-39902650)
chr4 (378-421)||(50543318-50543361)
chr4 (371-421)||(50543555-50543606)
chr4 (378-421)||(53828511-53828554)
chr4 (329-358)||(35645821-35645850)
chr4 (378-410)||(7926611-7926643)
chr4 (370-421)||(21750265-21750317)
chr4 (378-418)||(23209894-23209934)
chr4 (330-358)||(28246141-28246169)
chr4 (330-358)||(35796798-35796826)
[»] scaffold0048 (1 HSPs)
scaffold0048 (327-421)||(81839-81938)
[»] scaffold0692 (2 HSPs)
scaffold0692 (329-421)||(5742-5839)
scaffold0692 (330-358)||(5600-5628)
[»] scaffold0519 (2 HSPs)
scaffold0519 (329-421)||(1915-2012)
scaffold0519 (327-358)||(2148-2179)
[»] scaffold0083 (1 HSPs)
scaffold0083 (330-419)||(51236-51330)
[»] scaffold0481 (1 HSPs)
scaffold0481 (378-421)||(3459-3502)
[»] scaffold0129 (1 HSPs)
scaffold0129 (378-421)||(14356-14399)
[»] scaffold0092 (1 HSPs)
scaffold0092 (378-421)||(5708-5751)
[»] scaffold0005 (2 HSPs)
scaffold0005 (378-421)||(56512-56555)
scaffold0005 (371-410)||(288656-288696)
[»] scaffold0766 (1 HSPs)
scaffold0766 (329-358)||(6273-6302)
[»] scaffold0001 (1 HSPs)
scaffold0001 (327-355)||(429870-429898)


Alignment Details
Target: chr3 (Bit Score: 403; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 10 - 510
Target Start/End: Original strand, 27782743 - 27783243
Alignment:
Q  10 gcacagaattaagtagcaaggaaatttctttgtttcaaggtcattgtttatgcgagaatatgaaaaattaaaagagcaacatacaaggaacttcttttca 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27782743 gcacagaattaagtagcaagggaatttctttgtttcaaggtcattgtttatgcgagaatatgaaaaattaaaagagcaacatacagggaacttcttttca 27782842  T
Q  110 aggtcattgtcccttaannnnnnnnnnnnnnnnnnnnnnctgtcatttgcaaatgagattataaagcttagggccaaacaagttgcaaggttaaacaatg 209  Q
    |||||||||||||||||                      || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27782843 aggtcattgtcccttaatttttgttttaatttttattttctttcatttgcaaatgagattataaagcttagggccaaacaagttgcaaggttaaacaatg 27782942  T
Q  210 cctgataagagtttataaaaaatgtcactatataaaaacataatatgttcacgcacgtgtgatagggtgtactgagaaaaacatgttaaagagtccacat 309  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27782943 cctgataagagtttataagaaatgtcacgatataaaaacataatatgttcacgcacgtgtgatagggtgtactgagaaaaacatgttaaagagtccacat 27783042  T
Q  310 catataagagatggcccgcctgacaatgtgtttataagtgggggcaatctttattaagtaagttttgtgggttgtgttaggcccaatcatgatttctaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27783043 catataagagatggcccgcctgacaatgtgtttataagtgggggcaatcttcattaagtaagttttgtgggttgtgttaggcccaatcatgatttctaag 27783142  T
Q  410 atggtatcagagtctccaccaatagtattgggcgtgagggaatgtattaaagagtctcacatcggttgatagtggggaaaatcttcacctcataaggttt 509  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27783143 atggtatcagagtctccaccaatagtgttgggcgtgaggggatgtattaaagagtctcacatcggttgatagtggggaaaatcttcacctcataaggttt 27783242  T
Q  510 t 510  Q
    |    
T  27783243 t 27783243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 4155377 - 4155424
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  4155377 gggttgtgttaggcccaaccacgatttctaagatggtatcagagtctc 4155424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 16239636 - 16239697
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  16239636 gttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaa 16239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 1723107 - 1723064
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  1723107 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 1723064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 54567945 - 54567988
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  54567945 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 54567988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 425
Target Start/End: Complemental strand, 16927036 - 16926933
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||||| |||| | ||     |||   |||||||||| |||||||| || ||| || ||||||||||||||||||||||    
T  16927036 gcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagag 16926937  T
Q  422 tctc 425  Q
    ||||    
T  16926936 tctc 16926933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 20327880 - 20327839
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  20327880 gggttgtgttaggcccaaccatgatttctaatatggtatcag 20327839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 27086635 - 27086680
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggta 415  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  27086635 gttttgtggagttgtgttaggcccaaccatgatttctaagatggta 27086680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 33640090 - 33640151
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||| ||||||||||||||||||  |||||||||||| |||||||| |||| ||||    
T  33640090 gttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctcctccaa 33640151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 419
Target Start/End: Complemental strand, 35038515 - 35038418
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    |||||||||||||||||||||||||||||||| |    |   |||   ||||||| |||||||||||||||||| || || |||||||||||||||||    
T  35038515 gcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcag 35038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 11589838 - 11589881
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  11589838 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 11589881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 424
Target Start/End: Complemental strand, 17001506 - 17001406
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttattaagtaag----ttttgtgggtt-gtgttaggcccaatcatgatttctaagatggtatcagagtc 423  Q
    |||||||||||||||||||||||||||||| | |     ||||    ||||||||| | |||||||| |||| |||||||||||| ||||||||||||||    
T  17001506 ctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgttaggtccaaccatgatttctaaaatggtatcagagtc 17001407  T
Q  424 t 424  Q
    |    
T  17001406 t 17001406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 17638287 - 17638330
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  17638287 gggttgtgttaggcccaaccacgatttctaagatggtataagag 17638330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 21833401 - 21833444
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  21833401 gggttgtgttaggcccaaccacgatttctaacatggtatcagag 21833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 420
Target Start/End: Original strand, 22729099 - 22729195
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    ||||||||||||||| |||||||||||||| | | |    |||   |||||||| ||||||||||||||||| ||  ||||||||||||||||||||    
T  22729099 ctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatcaga 22729195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 54368569 - 54368612
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||| ||||| || ||||||||||||||||||||||    
T  54368569 gggttgtgttagacccaaccacgatttctaagatggtatcagag 54368612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 356
Target Start/End: Original strand, 16239588 - 16239617
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaa 356  Q
    ||||||||||||||||||||||||||||||    
T  16239588 gcctgacaatgtgtttataagtgggggcaa 16239617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 39269330 - 39269359
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  39269330 ctgacaatgtgtttataagtgggggcaatc 39269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 472144 - 472116
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  472144 tgacaatgtgtttataagtgggggcaatc 472116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 1800070 - 1800126
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    |||||||| |||||| |||||||||| ||  ||||||||||||||||||||| ||||    
T  1800070 gttttgtgcggttgtattaggcccaaccacaatttctaagatggtatcagagcctcc 1800126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 418
Target Start/End: Complemental strand, 12930159 - 12930119
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  12930159 gggttgtgttaggcccaaccaccatttctaagatggtatca 12930119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 40765964 - 40765920
Alignment:
Q  381 ttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    ||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  40765964 ttgtgttaggctcaaacataatttttaagatggtatcagagtctc 40765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 45139002 - 45138954
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    ||||||||| || ||||| || |||||||||||||||||||||| ||||    
T  45139002 gggttgtgtaagacccaaccacgatttctaagatggtatcagagcctcc 45138954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 410
Target Start/End: Complemental strand, 50083111 - 50083079
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  50083111 gggttgtgttaggcccaaccatgatttctaaga 50083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 421
Target Start/End: Complemental strand, 2063818 - 2063722
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt---aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | | |   ||||  |||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  2063818 ctgacaatgtgtttataagtgggggcaatcctcactcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 2063722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 24528539 - 24528636
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  24528539 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagag 24528636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 41667080 - 41666971
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  41667080 gcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 41666981  T
Q  422 tctccaccaa 431  Q
     |||| ||||    
T  41666980 cctcctccaa 41666971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 8081144 - 8081101
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  8081144 gggttgtgttaggcccaaccatgatttctaagatggtatcagag 8081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 13296717 - 13296764
Alignment:
Q  370 agttttgtgggttgtgttaggcccaatcatgatttctaagatggtatc 417  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  13296717 agttttgtgggttgtgttaggcccaaccacgatttctaagatggtatc 13296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 2062025 - 2061992
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt 360  Q
    ||||||||||||||||||||||||||||||||||    
T  2062025 gcctgacaatgtgtttataagtgggggcaatctt 2061992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 15480321 - 15480418
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | |      |||   |||||||||| || |||||||||||| || ||||||||||||||||||||||    
T  15480321 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagag 15480418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 9368648 - 9368691
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||    
T  9368648 gggttgtgttaggcccaaccataatttctaaggtggtatcagag 9368691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 18333730 - 18333687
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || || |||||||||||||||||||    
T  18333730 gggttgtgttaggcccaaccacgaattctaagatggtatcagag 18333687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 19705900 - 19705931
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  19705900 gcctgacaatgtgtttataagtgggggcaatc 19705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 24531652 - 24531695
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||| |||||| || ||||||||||||||||||||||    
T  24531652 gggttgtgttatgcccaaccacgatttctaagatggtatcagag 24531695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 41666844 - 41666813
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  41666844 gcctgacaatgtgtttataagtgggggcaatc 41666813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 6413512 - 6413482
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  6413512 cctgacaatgtgtttataagtgggggcaatc 6413482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 17352521 - 17352491
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  17352521 cctgacaatgtgtttataagtgggggcaatc 17352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 24531597 - 24531627
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  24531597 cctgacaatgtgtttataagtgggggcaatc 24531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 421
Target Start/End: Complemental strand, 95526 - 95489
Alignment:
Q  384 tgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||| || ||||||||||||||||||||||    
T  95526 tgttaggcccaaccacgatttctaagatggtatcagag 95489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 1564607 - 1564550
Alignment:
Q  370 agttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    ||||||||||| ||||||||||| ||| || ||||||||||||| |||||||| ||||    
T  1564607 agttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagcctcc 1564550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 17016426 - 17016385
Alignment:
Q  380 gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  17016426 gttgtgttaggcccaaccacgatttctaacatggtatcagag 17016385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 24346768 - 24346715
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||||| ||||| || ||||| |||||||||||||||| |||| ||||    
T  24346768 gggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctccaa 24346715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 37782135 - 37782106
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  37782135 ctgacaatgtgtttataagtgggggcaatc 37782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 30770349 - 30770321
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  30770349 tgacaatgtgtttataagtgggggcaatc 30770321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 41790657 - 41790754
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttat----taagtaagttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||| ||||| | |     ||||   ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  41790657 cctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtgggttgtgttaggcccaaccacgatttctaagatggtatcagag 41790754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 10884110 - 10884160
Alignment:
Q  371 gttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  10884110 gttttgtgggttgtgttaggcccaaccacgatttctaagatggtatcagag 10884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 24532508 - 24532409
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  24532508 gcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagag 24532409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 11232281 - 11232182
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  11232281 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 11232182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 12317045 - 12317142
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttattaagtaag----ttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | |     ||||    ||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  12317045 ctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagag 12317142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 421
Target Start/End: Complemental strand, 11232514 - 11232417
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  11232514 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 11232417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 20301306 - 20301357
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||||||    
T  20301306 gttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagag 20301357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 21087938 - 21087989
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||| ||||||||||||||||| || ||||||||||||||||||||||    
T  21087938 gttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagag 21087989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 19256907 - 19256808
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||| ||||||||||||||||||||| | |      ||| | |||||||||| ||||||||||||||| || ||||||||| ||||||||||||    
T  19256907 gcctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 19256808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 5932036 - 5932005
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  5932036 gcctgacaatgtgtttataagtgggggcaatc 5932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 12688305 - 12688393
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatcttta----ttaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||||||||||||| |||      |||  |||||||| |||||||| |||| |||| |||||||||||||||    
T  12688305 cctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtccaaccatgatttctaagat 12688393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 15042757 - 15042726
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  15042757 gcctgacaatgtgtttataagtgggggcaatc 15042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 31197668 - 31197710
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  31197668 gggttgtgttaggcccaacca-gatttctaagatggtatcagag 31197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 35682868 - 35682837
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35682868 gcctgacaatgtgtttataagtgggggcaatc 35682837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 37001271 - 37001322
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| |||||||||||||||| || |||||| |||||||||||||||    
T  37001271 gttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagag 37001322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 38447514 - 38447483
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  38447514 gcctgacaatgtgtttataagtgggggcaatc 38447483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39052624 - 39052593
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39052624 gcctgacaatgtgtttataagtgggggcaatc 39052593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39053016 - 39052985
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39053016 gcctgacaatgtgtttataagtgggggcaatc 39052985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 420
Target Start/End: Complemental strand, 28213135 - 28213093
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    |||||||||||||||||| || ||||||||| |||||||||||    
T  28213135 gggttgtgttaggcccaaccacgatttctaatatggtatcaga 28213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 7669640 - 7669669
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  7669640 ctgacaatgtgtttataagtgggggcaatc 7669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 7729907 - 7729969
Alignment:
Q  293 tgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||| |||||| ||| |||||||||    |||| ||||||||||||||||||||||||    
T  7729907 tgttaaagagtcccacatcagatatgagatggcc----tgaccatgtgtttataagtgggggcaatc 7729969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 8084182 - 8084223
Alignment:
Q  380 gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||| ||||| || ||||||||||||||||||||||    
T  8084182 gttgtgttagacccaaccacgatttctaagatggtatcagag 8084223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 38476083 - 38476144
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||| || |||||||||||| ||  ||||||||||||||||||||| |||| ||||    
T  38476083 gttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctcctccaa 38476144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 357
Target Start/End: Original strand, 42584672 - 42584701
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaat 357  Q
    ||||||||||||||||||||||||||||||    
T  42584672 cctgacaatgtgtttataagtgggggcaat 42584701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 20301261 - 20301289
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  20301261 tgacaatgtgtttataagtgggggcaatc 20301289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 20301501 - 20301529
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  20301501 tgacaatgtgtttataagtgggggcaatc 20301529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21087893 - 21087921
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  21087893 tgacaatgtgtttataagtgggggcaatc 21087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 21088133 - 21088161
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  21088133 tgacaatgtgtttataagtgggggcaatc 21088161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 31079602 - 31079566
Alignment:
Q  382 tgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    ||||||||||||||| | |||||||||||||||||||    
T  31079602 tgtgttaggcccaataaagatttctaagatggtatca 31079566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 424
Target Start/End: Complemental strand, 48243524 - 48243422
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | ||     |||   |||||||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  48243524 gcctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatcagag 48243425  T
Q  422 tct 424  Q
    |||    
T  48243424 tct 48243422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 25620134 - 25620232
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  25620134 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 25620232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 29469602 - 29469701
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| || ||||||||| ||||||||||||    
T  29469602 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 29469701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 6634852 - 6634940
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttat----taagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||| ||||||||||||||||||||| | |     ||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  6634852 gcctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccatgatttctaaga 6634940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 10882270 - 10882227
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  10882270 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 10882227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 33996350 - 33996299
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  33996350 gttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagag 33996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 40121955 - 40121912
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  40121955 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 40121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 425
Target Start/End: Original strand, 4886383 - 4886429
Alignment:
Q  379 ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||    
T  4886383 ggttgtgttaggcccaaccacgatttctaagatggtatcagggtctc 4886429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 21821852 - 21821902
Alignment:
Q  372 ttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  21821852 ttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagag 21821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 21861291 - 21861390
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||| |||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  21861291 gcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagag 21861390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 421
Target Start/End: Complemental strand, 31257352 - 31257255
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||| | ||||||||||||||||||| ||| |    |||   |||||||||| ||||||||||||||| || ||||||||| ||||||||||||    
T  31257352 ctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 31257255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 3038115 - 3038072
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| |||||||||||||||  ||||||||    
T  3038115 gggttgtgttaggcccaaccatgatttctaagataatatcagag 3038072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 21861526 - 21861557
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  21861526 gcctgacaatgtgtttataagtgggggcaatc 21861557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 29469837 - 29469868
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  29469837 gcctgacaatgtgtttataagtgggggcaatc 29469868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 31485511 - 31485480
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31485511 gcctgacaatgtgtttataagtgggggcaatc 31485480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 33834244 - 33834287
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| ||  |||||||||||||||||||||    
T  33834244 gggttgtgttaggcccaaccaccatttctaagatggtatcagag 33834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 34027624 - 34027712
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||| ||||||||||||||||||||| | | |    |||   |||||||||| |||||||||||||||||| |||||||||||    
T  34027624 gcctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 36277313 - 36277282
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  36277313 gcctgacaatgtgtttataagtgggggcaatc 36277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 43688246 - 43688215
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  43688246 gcctgacaatgtgtttataagtgggggcaatc 43688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 431
Target Start/End: Complemental strand, 26240001 - 26239894
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtc 423  Q
    |||||||||||||||||||||||||||||| | |      ||||  || ||||||| ||||||||| ||||| ||  ||||||||||||||||||||| |    
T  26240001 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatcagagcc 26239902  T
Q  424 tccaccaa 431  Q
    ||| ||||    
T  26239901 tcctccaa 26239894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 2404259 - 2404230
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  2404259 ctgacaatgtgtttataagtgggggcaatc 2404230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 3520125 - 3520096
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  3520125 ctgacaatgtgtttataagtgggggcaatc 3520096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 4454775 - 4454804
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  4454775 ctgacaatgtgtttataagtgggggcaatc 4454804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 5871852 - 5871795
Alignment:
Q  370 agttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    |||||||| |||||||||||| ||||| || ||||||||||||| |||||||| ||||    
T  5871852 agttttgtagggttgtgttagtcccaaccacgatttctaagatgatatcagagcctcc 5871795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 26562160 - 26562127
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt 360  Q
    |||||||||| |||||||||||||||||||||||    
T  26562160 gcctgacaatttgtttataagtgggggcaatctt 26562127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 36993105 - 36993072
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagat 411  Q
    |||||||||||||||||| |||||||||||||||    
T  36993105 gggttgtgttaggcccaaccatgatttctaagat 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 48243146 - 48243117
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  48243146 ctgacaatgtgtttataagtgggggcaatc 48243117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 410
Target Start/End: Complemental strand, 7786285 - 7786253
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  7786285 gggttgtgttaggcccaaccatgatttctaaga 7786253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 35308230 - 35308202
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  35308230 tgacaatgtgtttataagtgggggcaatc 35308202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 36993336 - 36993296
Alignment:
Q  381 ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||  |||| |||||||||||||||||||||||||    
T  36993336 ttgtgttagatccaaccatgatttctaagatggtatcagag 36993296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 421
Target Start/End: Complemental strand, 4098482 - 4098391
Alignment:
Q  334 aatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtgggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||| | |  |||  |||  ||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  4098482 aatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtgggttgtgttaggcccaaccacgatttctaagttggtatcagag 4098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 38668125 - 38668221
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||||||| | ||     |||  | ||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  38668125 tgacaatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagag 38668221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 25145751 - 25145708
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  25145751 gggttgtgttaggcccaaccatgatttctaagatgatatcagag 25145708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 29266006 - 29266049
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  29266006 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 29266049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 35772082 - 35772125
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  35772082 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 35772125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 4113093 - 4112998
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatc 417  Q
    |||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| || ||||||||||||||||||    
T  4113093 gcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatc 4112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 3169765 - 3169863
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagt 422  Q
    |||||||| ||||||||||||||||||||||| |      |||   |||||||||| ||||||||||||||| || ||||||||| |||||||||||||    
T  3169765 ctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagt 3169863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 39348383 - 39348331
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  39348383 gggttgtgttaggcccaa-cacgatttctaagatggtatcagagcctcctccaa 39348331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 30369879 - 30369931
Alignment:
Q  370 agttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||| ||||||||||||||| || |||||||||||| |||||||||    
T  30369879 agttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagag 30369931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 35772261 - 35772350
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta----ttaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagat 411  Q
    |||||||||||||||||||||||||||||||| |||      |||   ||||||| |||||||||||||||||| || ||||||||||||    
T  35772261 gcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 2859479 - 2859448
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  2859479 gcctgacaatgtgtttataagtgggggcaatc 2859448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 8870941 - 8870894
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||    
T  8870941 gggttgtgttaggtccaaccaccatttctaagatggtatcagagtctc 8870894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 15986420 - 15986389
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  15986420 gcctgacaatgtgtttataagtgggggcaatc 15986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 33156786 - 33156829
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  33156786 gggttgtgttaggcccaaccacgatttctaagatggtattagag 33156829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 51589859 - 51589902
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  51589859 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 51589902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 2120130 - 2120172
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||    
T  2120130 gggttgtgttaggtccaatcacgatttctaagatgatatcaga 2120172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 360
Target Start/End: Original strand, 16163167 - 16163197
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctt 360  Q
    |||||||||||||||||||||||||||||||    
T  16163167 tgacaatgtgtttataagtgggggcaatctt 16163197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 17452915 - 17452816
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||| |||||||||||||||||||||    |   |||   ||||||| ||||||||||||||| || || ||||||||||||||||| ||||    
T  17452915 gcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagag 17452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 35892344 - 35892390
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtct 424  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||    
T  35892344 gggttctgttaggctcaaccataatttctaagatggtatcagagtct 35892390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 40079150 - 40079180
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  40079150 cctgacaatgtgtttataagtgggggcaatc 40079180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 11524826 - 11524883
Alignment:
Q  370 agttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    ||||||||| ||||||||||||||||  ||  ||||||||||||||||||||| ||||    
T  11524826 agttttgtgaggttgtgttaggcccatccacaatttctaagatggtatcagagcctcc 11524883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 20208611 - 20208582
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  20208611 ctgacaatgtgtttataagtgggggcaatc 20208582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 354
Target Start/End: Complemental strand, 21626457 - 21626399
Alignment:
Q  293 tgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggc 354  Q
    ||||||||||||| |||||| |||||||||||||    ||||||| |||||||||||||||||    
T  21626457 tgttaaagagtcccacatcagataagagatggcc----tgacaatatgtttataagtgggggc 21626399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 25713392 - 25713421
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  25713392 ctgacaatgtgtttataagtgggggcaatc 25713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 26173309 - 26173280
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  26173309 ctgacaatgtgtttataagtgggggcaatc 26173280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 33157274 - 33157307
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||| ||||||||||||    
T  33157274 gggttgtgttaggcccaatcacgatttctaagat 33157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 8870773 - 8870745
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  8870773 tgacaatgtgtttataagtgggggcaatc 8870745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 11525042 - 11525098
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    |||||||| ||||||||||||||||  ||  ||||||||||||||||||||| ||||    
T  11525042 gttttgtgaggttgtgttaggcccatccacaatttctaagatggtatcagagcctcc 11525098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 26173541 - 26173513
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaat 357  Q
    |||||||||||||||||||||||||||||    
T  26173541 ctgacaatgtgtttataagtgggggcaat 26173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 38668360 - 38668388
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  38668360 tgacaatgtgtttataagtgggggcaatc 38668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 38733207 - 38733251
Alignment:
Q  381 ttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||    
T  38733207 ttgtgttaggttcaaccacgatttctaagatggtatcagagtctc 38733251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 51460482 - 51460430
Alignment:
Q  370 agttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||| ||||||||||||||| ||| |||||||| ||| ||||||||    
T  51460482 agttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagag 51460430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 9705017 - 9705126
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |      ||||  |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  9705017 gcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 9705116  T
Q  422 tctccaccaa 431  Q
     |||| ||||    
T  9705117 cctcctccaa 9705126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 4868844 - 4868791
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  4868844 gggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaa 4868791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 8001582 - 8001533
Alignment:
Q  377 tgggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  8001582 tgggttgtgttaggcccaaccacaatttctaagatggtatcagagtctcc 8001533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 13353198 - 13353297
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  13353198 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 13353297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 33796323 - 33796422
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  33796323 gcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 33796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 20373623 - 20373667
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagt 422  Q
    |||||||||||||||||| || ||||| |||||||||||||||||    
T  20373623 gggttgtgttaggcccaaccacgatttataagatggtatcagagt 20373667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 4868664 - 4868633
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  4868664 gcctgacaatgtgtttataagtgggggcaatc 4868633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 8026442 - 8026485
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  8026442 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 8026485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 12330218 - 12330167
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||||||    
T  12330218 gttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagag 12330167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 27653262 - 27653313
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||| ||||||||||||||| || ||||||||| ||||||||||||    
T  27653262 gttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagag 27653313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 30256631 - 30256674
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  30256631 gggttgtgttaggcccaaccacgatttctaaggtggtatcagag 30256674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 30256865 - 30256908
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  30256865 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 30256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 31961175 - 31961206
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31961175 gcctgacaatgtgtttataagtgggggcaatc 31961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 3680065 - 3680107
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    |||||||||||||||||| ||  ||||||||||||||||||||    
T  3680065 gggttgtgttaggcccaaccacaatttctaagatggtatcaga 3680107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 15082183 - 15082133
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    |||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  15082183 gttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcaga 15082133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 16570157 - 16570244
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||||| ||||| |||| |    ||  ||||  |||||||||| ||||||||||||||| ||||||||||||||    
T  16570157 cctgacaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaaga 16570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 33494592 - 33494634
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    |||||||||||||||||| ||  ||||||||||||||||||||    
T  33494592 gggttgtgttaggcccaaccaccatttctaagatggtatcaga 33494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 3680245 - 3680274
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  3680245 ctgacaatgtgtttataagtgggggcaatc 3680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 6543028 - 6542999
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  6543028 ctgacaatgtgtttataagtgggggcaatc 6542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 424
Target Start/End: Complemental strand, 10145795 - 10145735
Alignment:
Q  365 aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagagtct 424  Q
    |||| |||||||| |||||||||||||| ||| ||  |||||||||||| |||||||||||    
T  10145795 aagtcagttttgtagggttgtgttaggctcaaccacaatttctaagatgatatcagagtct 10145735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 11085626 - 11085670
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggt 414  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||    
T  11085626 gttttgtgcggttgtgttaggtccaatcacgatttctaagatggt 11085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 27036499 - 27036403
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatctt-tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||| |||||||||||||||||||||   |  ||||   ||||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  27036499 gcctgacaatttgtttataagtgggggcaatcccctcataagccggttttgtagggttgtgttaggcccaaccatgatttctaatatggtatcagag 27036403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 5509132 - 5509175
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  5509132 gggttgtgttaggcccaaccatgatttctaatatggtatcagag 5509175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 5711762 - 5711653
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tt--aagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||||| | |  ||  |||   ||||||| |||||||||||||||||| ||  ||||||||||| |||||||||    
T  5711762 gcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagag 5711663  T
Q  422 tctccaccaa 431  Q
     |||| ||||    
T  5711662 cctcctccaa 5711653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 15124814 - 15124767
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||    
T  15124814 gggttgtgttagacccaaccacgatttctaagatggtatcagagtctc 15124767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 28407832 - 28407781
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  28407832 gttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagag 28407781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 40379475 - 40379432
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  40379475 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 40379432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 420
Target Start/End: Complemental strand, 93658 - 93616
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcaga 420  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  93658 gggttgtgttaggcccaaccacgatttctaagatggtatcaga 93616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 33381232 - 33381174
Alignment:
Q  369 aagttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    |||||||||| ||||||||||| ||||| || ||||||||||||||||| |||||||||    
T  33381232 aagttttgtgaggttgtgttagtcccaaccacgatttctaagatggtattagagtctcc 33381174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 14466497 - 14466398
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||| |||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  14466497 gcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 14466398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 21383709 - 21383648
Alignment:
Q  371 gttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||| ||| ||||||||||| || |||||||||||||||||||||| |||| ||||    
T  21383709 gttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaa 21383648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 10571023 - 10571067
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagt 422  Q
    |||||||||||||| ||| || |||||||||||||||||||||||    
T  10571023 gggttgtgttaggctcaaccacgatttctaagatggtatcagagt 10571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 93385 - 93342
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||| ||||||||||||||||    
T  93385 gggttgtgttaggcccaaccacgatttttaagatggtatcagag 93342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 2029822 - 2029865
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  2029822 gggttgttttaggcccaaccacgatttctaagatggtatcagag 2029865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 5711526 - 5711495
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  5711526 gcctgacaatgtgtttataagtgggggcaatc 5711495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 14927100 - 14927188
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgtg-ggttgtgttaggcccaatcatgatttctaagat 411  Q
    ||||||||||||||||||||||||||||||| |    |  ||||| || |||||| ||||||||||||| ||| || ||||||||||||    
T  14927100 cctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagat 14927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 16419320 - 16419363
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  16419320 gggttgtattaggcccaaccacgatttctaagatggtatcagag 16419363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 16533544 - 16533575
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  16533544 gcctgacaatgtgtttataagtgggggcaatc 16533575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 17719397 - 17719428
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  17719397 gcctgacaatgtgtttataagtgggggcaatc 17719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 21591835 - 21591882
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||||    
T  21591835 gggttgtgttaggcccaaccacgatttctaagttggtagcagagtctc 21591882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 27897637 - 27897590
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||    
T  27897637 gggttgtgttaggcccaaccaccatttctaagatggtatcaaagtctc 27897590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 5206737 - 5206799
Alignment:
Q  365 aagtaagttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    |||| ||||||||| |||||||| || | |||||| ||||||||||||| |||||||||||||    
T  5206737 aagtcagttttgtgaggttgtgtaagactcaatcacgatttctaagatgttatcagagtctcc 5206799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 37812584 - 37812554
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||||    
T  37812584 cctgacaatgtgtttataagtgggggcaatc 37812554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 16419501 - 16419530
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  16419501 ctgacaatgtgtttataagtgggggcaatc 16419530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 17525423 - 17525394
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  17525423 ctgacaatgtgtttataagtgggggcaatc 17525394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 32356386 - 32356481
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatcttta---ttaagtaagttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||||||||||||||| | |     |||  |||||||||| ||||||||||||||||  | || ||||||| |||||||||||    
T  32356386 tgacaatgtgtttataagtgggggcaatcctcacccacaagccagttttgtggagttgtgttaggcccaactacgaattctaagttggtatcagag 32356481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 355
Target Start/End: Complemental strand, 93210 - 93182
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggca 355  Q
    |||||||||||||||||||||||||||||    
T  93210 gcctgacaatgtgtttataagtgggggca 93182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 40149264 - 40149224
Alignment:
Q  381 ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||| ||  |||||||||||||||||||||    
T  40149264 ttgtgttaggcccaaccacaatttctaagatggtatcagag 40149224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 12869294 - 12869247
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  12869294 gggttgtgttaggcccaaccacgatttctaagatggtatcagagtctc 12869247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 17111616 - 17111662
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtct 424  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  17111616 gggttgtgttaggcccaaccacgatttctaagatggtatcagagtct 17111662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 426
Target Start/End: Original strand, 52559565 - 52559668
Alignment:
Q  328 cctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagagt 422  Q
    ||||||||||||||||||||||||||||||| | |      |||   |||||||||| ||||||||||||||| ||||||||||||||| |||||||||     
T  52559565 cctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagc 52559664  T
Q  423 ctcc 426  Q
    ||||    
T  52559665 ctcc 52559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 379 - 421
Target Start/End: Complemental strand, 52827455 - 52827413
Alignment:
Q  379 ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  52827455 ggttgtgttaggcccaaccatgatttctaagatggtatcagag 52827413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 35788712 - 35788765
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctccaccaa 431  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||| ||||    
T  35788712 gggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctccaa 35788765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 22231339 - 22231296
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  22231339 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 22231296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 40716652 - 40716609
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  40716652 gggttgtgttaggcccaaccatggtttctaagatggtatcagag 40716609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 40717472 - 40717429
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  40717472 gggttgtgttaggcccaaccacgatttctaagatggtatcagag 40717429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 44118986 - 44118915
Alignment:
Q  284 agaaaaacatgttaaagagtcc-acatcatataagagatggcccgcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||| |||||||||||||| |||||  |||||||||||||    |||||||||||||||||||||||| ||||    
T  44118986 agaaaaaaatgttaaagagtcccacatcggataagagatggcc----tgacaatgtgtttataagtgggggtaatc 44118915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 24513391 - 24513343
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagagtctcc 426  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||| ||||    
T  24513391 gggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcc 24513343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 35819168 - 35819112
Alignment:
Q  370 agttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagagtctc 425  Q
    ||||||||| ||||||||||||||||| || ||||| |||||||| |||||||||||    
T  35819168 agttttgtgaggttgtgttaggcccaaccacgatttttaagatggcatcagagtctc 35819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 1518217 - 1518260
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||||||||| || || ||||||||||||||||||||||    
T  1518217 gggttgtgttaggcctaaccacgatttctaagatggtatcagag 1518260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 9279224 - 9279255
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  9279224 gcctgacaatgtgtttataagtgggggcaatc 9279255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 9685443 - 9685494
Alignment:
Q  371 gttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||||||    
T  9685443 gttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagag 9685494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 11036833 - 11036802
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  11036833 gcctgacaatgtgtttataagtgggggcaatc 11036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 14783218 - 14783175
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  14783218 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 14783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 22863471 - 22863502
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  22863471 gcctgacaatgtgtttataagtgggggcaatc 22863502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 25052905 - 25052948
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  25052905 gggttgtgttaggcccaaccacgatttctaacatggtatcagag 25052948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 27634168 - 27634137
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  27634168 gcctgacaatgtgtttataagtgggggcaatc 27634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 28245613 - 28245582
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  28245613 gcctgacaatgtgtttataagtgggggcaatc 28245582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 31254494 - 31254463
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  31254494 gcctgacaatgtgtttataagtgggggcaatc 31254463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 35609742 - 35609699
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| || ||||| |||||||||||||||||||||||||    
T  35609742 gggttgtgtaagacccaaccatgatttctaagatggtatcagag 35609699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 35788656 - 35788687
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35788656 gcctgacaatgtgtttataagtgggggcaatc 35788687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 35788891 - 35788922
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  35788891 gcctgacaatgtgtttataagtgggggcaatc 35788922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 39902650 - 39902619
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  39902650 gcctgacaatgtgtttataagtgggggcaatc 39902619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 50543361 - 50543318
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||||||| ||||||||    
T  50543361 gggttgtgttaggcccaaccacgatttctaagatgttatcagag 50543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 50543606 - 50543555
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| |||||||||||||||| || ||||||||||||| ||||||||    
T  50543606 gttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagag 50543555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 53828554 - 53828511
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| ||  |||||||||||||||||||||    
T  53828554 gggttgtgttaggcccaaccacaatttctaagatggtatcagag 53828511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 35645850 - 35645821
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  35645850 ctgacaatgtgtttataagtgggggcaatc 35645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 7926611 - 7926643
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaaga 410  Q
    |||||||||||||||||| ||||||||||||||    
T  7926611 gggttgtgttaggcccaaccatgatttctaaga 7926643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 21750317 - 21750265
Alignment:
Q  370 agttttgtg-ggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    ||||||||| ||||||||||| |||||||| || || ||||||||||||||||    
T  21750317 agttttgtgaggttgtgttagacccaatcacgaattttaagatggtatcagag 21750265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 23209894 - 23209934
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatca 418  Q
    |||||| |||||||||||||| ||||||||||||| |||||    
T  23209894 gggttgagttaggcccaatcacgatttctaagatgatatca 23209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 28246169 - 28246141
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  28246169 tgacaatgtgtttataagtgggggcaatc 28246141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 35796826 - 35796798
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  35796826 tgacaatgtgtttataagtgggggcaatc 35796798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 81839 - 81938
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||| ||||||||||||||| |||| || |  |||  |||  |||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  81839 gcctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 81938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 421
Target Start/End: Complemental strand, 5839 - 5742
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatctttatt----aagtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | ||     |||   |||||| ||| ||||||||||||||| || ||||||||||||||||||||||    
T  5839 ctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagag 5742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 358
Target Start/End: Complemental strand, 5628 - 5600
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatc 358  Q
    |||||||||||||||||||||||||||||    
T  5628 tgacaatgtgtttataagtgggggcaatc 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 421
Target Start/End: Original strand, 1915 - 2012
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatcttta--tta--agtaagttttgtggg-ttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||||||||||||||| | |  |||  ||   |||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  1915 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagag 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Original strand, 2148 - 2179
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||||    
T  2148 gcctgacaatgtgtttataagtgggggcaatc 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 419
Target Start/End: Original strand, 51236 - 51330
Alignment:
Q  330 tgacaatgtgtttataagtgggggcaatctt----tattaagtaagttttgt-gggttgtgttaggcccaatcatgatttctaagatggtatcag 419  Q
    ||||||||||||||||||||||||||||| |    |   |||| |||||||| ||||||||||| || ||||||  |||||||||||||||||||    
T  51236 tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaagatggtatcag 51330  T

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Target: scaffold0481 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 3502 - 3459
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||    
T  3502 gggttgtgttagacccaatcacgatttctaatatggtatcagag 3459  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 14356 - 14399
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || | ||||||||||||||||||||    
T  14356 gggttgtgttaggcccaaccacgttttctaagatggtatcagag 14399  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 5708 - 5751
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||| ||||| || ||||||||||||||||||||||    
T  5708 gggttgtgttagacccaaccacgatttctaagatggtatcagag 5751  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 56512 - 56555
Alignment:
Q  378 gggttgtgttaggcccaatcatgatttctaagatggtatcagag 421  Q
    |||||||||||||||||| || ||||||||| ||||||||||||    
T  56512 gggttgtgttaggcccaaccacgatttctaatatggtatcagag 56555  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 410
Target Start/End: Complemental strand, 288696 - 288656
Alignment:
Q  371 gttttgtgg-gttgtgttaggcccaatcatgatttctaaga 410  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  288696 gttttgtggagttgtgttaggcccaaccatgatttctaaga 288656  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 6273 - 6302
Alignment:
Q  329 ctgacaatgtgtttataagtgggggcaatc 358  Q
    ||||||||||||||||||||||||||||||    
T  6273 ctgacaatgtgtttataagtgggggcaatc 6302  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 355
Target Start/End: Original strand, 429870 - 429898
Alignment:
Q  327 gcctgacaatgtgtttataagtgggggca 355  Q
    |||||||||||||||||||||||||||||    
T  429870 gcctgacaatgtgtttataagtgggggca 429898  T

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